BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg317848
Length=1365
Score E
Sequences producing significant alignments: (Bits) Value
AT3G10490.2 | Symbols: ANAC052, NAC052 | NAC domain containing ... 1642 0.0
AT3G10480.3 | Symbols: ANAC050, NAC050 | NAC domain containing ... 994 0.0
> AT3G10490.2 | Symbols: ANAC052, NAC052 | NAC domain containing
protein 52 | chr3:3267835-3270883 FORWARD LENGTH=1793
Length=1793
Score = 1642 bits (889), Expect = 0.0
Identities = 1220/1375 (89%), Gaps = 41/1375 (3%)
Strand=Plus/Plus
Query 1 ATGGGTCGCGAATCTCTGGCTGTTGTGTCCT-CGCCGCCATCGGCAACTGCGCCGAGTAC 59
||||||||||||||| ||||||||||| || ||||||| ||||| ||||| ||| ||||
Sbjct 163 ATGGGTCGCGAATCTGTGGCTGTTGTG-ACTGCGCCGCCCTCGGCGACTGCTCCGGGTAC 221
Query 60 TGC-T-GTGTCGGCGACCTCGCTTGCTCCTGGCTTTCGATTTCATCCGACTGATGAGGAA 117
||| | | || |||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 222 TGCTTCG-GT-GGCGACCTCGCTTGCTCCTGGCTTCCGATTTCATCCGACTGATGAGGAA 279
Query 118 CTCGTGAGCTATTACTTGAAGAGGAAGGTTCTGGGCAAACCTGTACGCTTCGATGCGATT 177
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 280 CTCGTGAGCTATTACTTGAAGAGGAAGGTTCTGGGCCAACCTGTACGCTTCGATGCGATT 339
Query 178 GGAGAGGTCGATATCTACAAGCATGAGCCCTGGGATTTAGCAGTGTTTTCCA-AGTTGAA 236
|||||||||||||| ||||||||||||||||||||||||||||||||||| | | |||||
Sbjct 340 GGAGAGGTCGATATATACAAGCATGAGCCCTGGGATTTAGCAGTGTTTTCGAGA-TTGAA 398
Query 237 AACTCGGGACCAAGAATGGTACTTCTTTAGCGCGTTAGATAAGAAGTACGGTAATGGTGC 296
|| ||||||||||||||||||||| || || |||||||||||||| || || |||||
Sbjct 399 GACAAGGGACCAAGAATGGTACTTCTACAGTGCATTAGATAAGAAGTATGGAAACGGTGC 458
Query 297 TAGGATGAATCGAGCAACTAACAAAGGGTACTGGAAAGCAACTGGAAAAGACAGAGAAAT 356
||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct 459 TAGGATGAACCGAGCAACTAACAGAGGGTACTGGAAAGCTACTGGAAAAGACAGAGAAAT 518
Query 357 CCGCCGGGATATTCAG-TTGCTCGGTATGAAAAAGACGCTTGTTTTCCACAGCGGGCGTG 415
|||||| || |||| | || ||||||||||||||||| |||||||||||||| |||||||
Sbjct 519 CCGCCGTGACATTCTGCTT-CTCGGTATGAAAAAGACACTTGTTTTCCACAGTGGGCGTG 577
Query 416 CTCCAGACGGGCTTCGGACTAATTGGGTGATGCACGAGTATCGACTTGTGGAATATGAAA 475
| |||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||
Sbjct 578 CACCAGACGGGCTTCGGACTAATTGGGTTATGCATGAGTATCGCCTTGTGGAATATGAAA 637
Query 476 CTGA-AACTAACGGAAGCCTGCTGCAGGATGCATATGTGTTGTGCAGAGTGTTTCACAAG 534
| || || ||||||| |||| |||| ||||||||||||||||| ||||| || ||||||
Sbjct 638 CCGAGAAA-AACGGAAACCTGGTGCAAGATGCATATGTGTTGTGTAGAGTCTTCCACAAG 696
Query 535 AATAACATTGGGCCACCGAGTGGGAACAGATATGCGCCATTCATGGAAGAAGAATGGGCT 594
||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||||||
Sbjct 697 AATAACATTGGGCCACCAAGTGGGAACAGATATGCTCCGTTCATGGAAGAGGAATGGGCT 756
Query 595 GATGGTGGAGGAGCTCTGATTCCAGGAATAGACGTTAGGGTCAGGGTAGAGGCTCTACCA 654
|||| || ||||||||||||||||||||||||||||| | ||||| ||||| | | |||
Sbjct 757 GATGATGAAGGAGCTCTGATTCCAGGAATAGACGTTAAGCTCAGGCTAGAGCCGCCGCCA 816
Query 655 CAAGCCAATGGAAACAACCAGATGGACCAGGAAATCCATTCAACAAGCAAG-GATCTCAT 713
||||||||||||| |||||||||||||||||||||| ||| | |||||| | ||||||
Sbjct 817 GTAGCCAATGGAAACGACCAGATGGACCAGGAAATCCAGTCAGCCAGCAAGAG-TCTCAT 875
Query 714 TAACATCAACGAGCTACCGAGAGATG-CTA-CTCCAATGGACATCGAACCTAACCAACAG 771
|||||||| |||| ||||||||| | | | ||||| |||| |||||| | ||||||||
Sbjct 876 CAACATCAATGAGCCACCGAGAGA-GAC-AGCTCCACTGGATATCGAATCGGACCAACAG 933
Query 772 AATCATCATGAGAGCG-CCTTCAAGCCACAGGAGAATAACAACCATAGCGGTTATGAAGA 830
||||||||||||| | ||| |||||| ||||| |||||||| ||| |||||| ||
Sbjct 934 AATCATCATGAGAATGACCT-CAAGCCGGAGGAGCATAACAACAATAATAATTATGATGA 992
Query 831 AGATGAGGAAACACTCAAACGCGAGCACACAGAAGAAGATGAGCGTCCTCCTCCAC-TCT 889
| | ||||||||||||||||||||||| | |||||||| ||||||||||||| || | |
Sbjct 993 AAACGAGGAAACACTCAAACGCGAGCAGATGGAAGAAGAGGAGCGTCCTCCTCGACCTGT 1052
Query 890 C--CATTCTCAACAAAGAAGCTCCACTACCTCTCCTCCAATACAAACGTAGACGCCAAAA 947
| |||||||||||||||||||| ||||||| || ||||||||||||||||||||||
Sbjct 1053 ATGCGTTCTCAACAAAGAAGCTCCATTACCTCTTCTGCAATACAAACGTAGACGCCAAAG 1112
Query 948 CGAATCCAACAACAACTCAAGCAGGAGCACACAGGACCATTGTTCGTCGTCCACAATAAC 1007
||| |||||||||||||||||||||| ||||||||||||||||||||| | |||| |||
Sbjct 1113 CGAGTCCAACAACAACTCAAGCAGGAACACACAGGACCATTGTTCGTC--C-ACAACAAC 1169
Query 1008 AACCGTCGACAATACAACCACCTTAATCTCATCATCATCTGCTGCTGCTGCCACCAACAC 1067
||| ||||||||||||||||| |||||||||||||| | || | ||||||||||||||
Sbjct 1170 AACTGTCGACAATACAACCACTTTAATCTCATCATC-T--GC--C-GCTGCCACCAACAC 1223
Query 1068 TGCCATCTCTGCATTGCTTGAGTTCTCACTTATGGGCATCTCCGAAAAGAAAGAAAA-CC 1126
|||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||| ||
Sbjct 1224 TGCCATCTCTGCATTGCTTGAGTTCTCACTCATGGGTATCTCCGACAAGAAAGAAAAGCC 1283
Query 1127 AGCAGCAACCGCTTA-GTCCTCACAAGGAAGCTTCT-CCTCCT-AG--TCCAATTGCATC 1181
|||||||||||| | |||||||||||||| ||| | |||||| | |||| |||||||
Sbjct 1284 -GCAGCAACCGCT-ACGTCCTCACAAGGAACCTT-TGCCTCCTCAAACTCCACTTGCATC 1340
Query 1182 TCCTGAAGAGAAGGTTGATGATCTCCAGAAAGAGATTCACCAGATGTCTGTTGAAAGAGA 1241
|||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1341 TCCTGAAGAGAAGGTTAATGATCTCCAGAAGGAGATTCACCAGATGTCTGTTGAAAGAGA 1400
Query 1242 AACTTTCAAGCTTGAGATGATGAGTGCAGAGGCTATGATCAGCATTCTCCAGTCAAGGAT 1301
||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 1401 AACTTTCAAGCTTGAAATGATGAGTGCAGAAGCTATGATCAGTATTCTCCAGTCAAGGAT 1460
Query 1302 CGATGCACTGCGTCAGGAGAACGAGGAACTTAAGAAGAAGAACGCCAGTGGACAA 1356
|||||| ||||||||||||||||||||||| |||||||| || || | |||||||
Sbjct 1461 CGATGCGCTGCGTCAGGAGAACGAGGAACTCAAGAAGAACAATGCTAATGGACAA 1515
> AT3G10480.3 | Symbols: ANAC050, NAC050 | NAC domain containing
protein 50 | chr3:3264348-3267090 FORWARD LENGTH=1952
Length=1952
Score = 994 bits (538), Expect = 0.0
Identities = 637/681 (94%), Gaps = 21/681 (3%)
Strand=Plus/Plus
Query 685 GAAATCCATTCAACAAGCAAGGATCTCATTAACATCAACGAGCTACCGAGAGATGCTACT 744
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 984 GAAATGCATTCAGCAAGCAAGGATCTCATTAACATCAACGAGCTACCGAGAGATGCTACT 1043
Query 745 CCAATGGACATCGAACCTAACCAACAGAATCATCATGAGAGCGCCTTCAAGCCACAGGAG 804
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1044 CCAATGGACATCGAACCTAACCAACAGAATCATCATGAGAGTGCCTTCAAGCCACAGGAG 1103
Query 805 AATAACAACCATAGCGGTTATGAAGAAGATGAGGAAACACTCAAACGCGAGCACACAGAA 864
| |||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||
Sbjct 1104 AGTAACAACCATAGTGGTTATGAAGAAGATGAGGACACACTCAAACGCGAGCACGCAGAA 1163
Query 865 GAAGATGAGCGTCCTCCTCCACTCTCCATTCTCAACAAAGAAGCTCCACTACCTCTCCTC 924
|||||||||||||||||| | || | |||||||||||||||||||||||||||||||||
Sbjct 1164 GAAGATGAGCGTCCTCCTTCTCTATGCATTCTCAACAAAGAAGCTCCACTACCTCTCCTG 1223
Query 925 CAATACAAACGTAGACGCCAAAACGAATCCAACAACAACTCAAGCAGGAGCACACAGGAC 984
|||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct 1224 CAATACAAACGTAGACGCCAAAACGAGTCCAACAACAACTCAAGCAGGAACACACAGGAC 1283
Query 985 CATTGTTCGTCGTCCACAATAACAACCGTCGACAATACAACCACCTTAATCTCATCATCA 1044
||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1284 CATTGTTCGTC--C-ACAATAACAACCGTCGACAATACAACCACCTTAATCTCATCATC- 1339
Query 1045 TCTGCTGCTGCTGCCACCAACACTGCCATCTCTGCATTGCTTGAGTTCTCACTTATGGGC 1104
| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1340 T--GCTGCTGCTGCTACCAACACTGCCATCTCTGCATTGCTTGAGTTCTCACTTATGGGT 1397
Query 1105 ATCTCCGAAAAGAAAGAAAACCAGCAGCAACCGCTTAGTCCTCACAAGGAAGCTTCTCCT 1164
|||||||| |||||||||||||||||| || || | |||| ||||||||
Sbjct 1398 ATCTCCGACAAGAAAGAAAACCAGCAG-AA------AG-----A---GGAAACTTCTCCT 1442
Query 1165 CCTAGTCCAATTGCATCTCCTGAAGAGAAGGTTGATGATCTCCAGAAAGAGATTCACCAG 1224
||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||
Sbjct 1443 CCTAGTCCAATTGCATCTCCTGAAGAGAAGGTTAATGATCTCCAGAAGGAGGTTCACCAG 1502
Query 1225 ATGTCTGTTGAAAGAGAAACTTTCAAGCTTGAGATGATGAGTGCAGAGGCTATGATCAGC 1284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1503 ATGTCTGTTGAAAGAGAAACTTTCAAGCTTGAGATGATGAGTGCAGAGGCTATGATCAGC 1562
Query 1285 ATTCTCCAGTCAAGGATCGATGCACTGCGTCAGGAGAACGAGGAACTTAAGAAGAAGAAC 1344
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1563 ATTCTCCAGTCAAGAATCGATGCGCTGCGTCAGGAGAACGAGGAACTTAAGAAGAAGAAC 1622
Query 1345 GCCAGTGGACAAGCTAGTTAA 1365
|||||||||||||||||||||
Sbjct 1623 GCCAGTGGACAAGCTAGTTAA 1643
Score = 819 bits (443), Expect = 0.0
Identities = 457/464 (98%), Gaps = 0/464 (0%)
Strand=Plus/Plus
Query 221 TGTTTTCCAAGTTGAAAACTCGGGACCAAGAATGGTACTTCTTTAGCGCGTTAGATAAGA 280
||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct 382 TGTTTTCGAAGTTGAAAACTCGGGACCAAGAATGGTACTTCTTCAGTGCGTTAGATAAGA 441
Query 281 AGTACGGTAATGGTGCTAGGATGAATCGAGCAACTAACAAAGGGTACTGGAAAGCAACTG 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 442 AGTACGGTAATGGTGCTAGGATGAATCGAGCAACTAACAAAGGGTACTGGAAAGCAACTG 501
Query 341 GAAAAGACAGAGAAATCCGCCGGGATATTCAGTTGCTCGGTATGAAAAAGACGCTTGTTT 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 502 GAAAAGACAGAGAAATCCGCCGGGATATTCAGTTGCTCGGTATGAAAAAGACGCTTGTTT 561
Query 401 TCCACAGCGGGCGTGCTCCAGACGGGCTTCGGACTAATTGGGTGATGCACGAGTATCGAC 460
||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |
Sbjct 562 TCCACAGCGGGCGTGCTCCAGACGGCCTTCGGACTAATTGGGTCATGCACGAGTATCGCC 621
Query 461 TTGTGGAATATGAAACTGAAACTAACGGAAGCCTGCTGCAGGATGCATATGTGTTGTGCA 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 622 TTGTGGAATATGAAACTGAAACTAACGGAAGCCTGCTGCAGGATGCATATGTGTTGTGCA 681
Query 521 GAGTGTTTCACAAGAATAACATTGGGCCACCGAGTGGGAACAGATATGCGCCATTCATGG 580
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 682 GAGTGTTTCACAAGAATAACATTGGGCCACCAAGTGGGAACAGATATGCGCCATTCATGG 741
Query 581 AAGAAGAATGGGCTGATGGTGGAGGAGCTCTGATTCCAGGAATAGACGTTAGGGTCAGGG 640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 742 AAGAAGAATGGGCTGATGGTGGAGGAGCTCTGATTCCAGGAATAGACGTTAGGGTCAGGG 801
Query 641 TAGAGGCTCTACCACAAGCCAATGGAAACAACCAGATGGACCAG 684
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 802 TAGAGGCTCTACCACAAGCCAATGGAAACAACCAGATGGACCAG 845
Score = 379 bits (205), Expect = 3e-104
Identities = 215/220 (98%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 1 ATGGGTCGCGAATCTCTGGCTGTTGTGTCCTCGCCGCCATCGGCAACTGCGCCGAGTACT 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct 63 ATGGGTCGCGAATCTCTGGCTGTTGTGTCCTCGCCGCCATCGGCGACTGCGCCCAGTACT 122
Query 61 GCTGTGTCGGCGACCTCGCTTGCTCCTGGCTTTCGATTTCATCCGACTGATGAGGAACTC 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 123 GCTGTGTCGGCTACCTCGCTTGCTCCTGGCTTTCGATTTCATCCGACTGATGAGGAACTC 182
Query 121 GTGAGCTATTACTTGAAGAGGAAGGTTCTGGGCAAACCTGTACGCTTCGATGCGATTGGA 180
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 183 GTGAGCTATTACTTGAAGAGGAAGGTTCTGGGTAAACCTGTACGCTTCGATGCGATTGGA 242
Query 181 GAGGTCGATATCTACAAGCATGAGCCCTGGGATTTAGCAG 220
||||| ||||||||||||||||||||||||||||||||||
Sbjct 243 GAGGTAGATATCTACAAGCATGAGCCCTGGGATTTAGCAG 282
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 67218529755
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5