BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg317855
Length=2487
Score E
Sequences producing significant alignments: (Bits) Value
AT3G10550.1 | Symbols: MTM1, AtMTM1 | Myotubularin-like phospha... 2420 0.0
AT5G04540.1 | Symbols: | Myotubularin-like phosphatases II sup... 1589 0.0
> AT3G10550.1 | Symbols: MTM1, AtMTM1 | Myotubularin-like phosphatases
II superfamily | chr3:3292899-3298522 REVERSE LENGTH=2904
Length=2904
Score = 2420 bits (1310), Expect = 0.0
Identities = 1418/1469 (97%), Gaps = 12/1469 (1%)
Strand=Plus/Plus
Query 97 AAGATGGATGGTACCGGTAGTTGGGACACGCTTGAATGGACCAAACTCGATTCAGCTTCA 156
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 137 AAGATGGATGGTACCGGTAGTTGGGACACGCTTGAATGGACCAAACTCGATTCAAC-T-- 193
Query 157 GGGTCAGGGTCAGGTTCAGGTTCTTTCTCGAATTTGAGTTGCTTGCTGGAATCGGAGAGG 216
||| | || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 194 ---TCA--G---GG-TCAGGTTCTTTCTCGAATTTGAGTTGCTTGCTGGAATCGGAGAGG 244
Query 217 GTCATCGTCGAGGGTTATGGAGTTGTTCTTATTAACACCGACGAAGCAGGAACTCTATTG 276
|||||||||||||||||||||||||| |||||||||||||| || |||||||| || |||
Sbjct 245 GTCATCGTCGAGGGTTATGGAGTTGTGCTTATTAACACCGATGAGGCAGGAACCCTTTTG 304
Query 277 GTGACAAATTTCCGTATTCTTTTTCTGAGTGAAGGAACCAGAAAAGTCATTCCACTTGGA 336
||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 305 GTGACTAATTTCCGTATTCTTTTTTTGAGTGAAGGAACCAGAAAAGTCATTCCACTTGGT 364
Query 337 ACCATTCCATTGGCAACTATTGAGAAGTTTAACAAAATGGTGCTGAAAGTTCAATCAAGC 396
|| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 365 ACAATTCCATTGGCAACTATTGAGAAGTTTAACAAAATGGTTCTGAAAGTTCAATCAAGT 424
Query 397 CCCCGTCAGTCTGACAAGAATCCACCAAGACGTCTTTTACAGGTCACTGGCAAAGACATG 456
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 425 CCCCGTCAGTCTGACAAGATTCCACCAAGACGTCTTTTACAGGTCACTGGCAAAGACATG 484
Query 457 AGGATAATTGTTTATGGCTTTCGTCCTCGCACCAAGCAGAGACGTAATGTGTTTGATGCA 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 485 AGGATAATTGTTTATGGCTTTCGTCCTCGCACCAAGCAGAGACGTAATGTGTTTGATGCA 544
Query 517 TTACTGAAGTGTAGCAAGCCAGAGAGAGTATGGGATCTATATACGTTTGCATGCGGTCCT 576
||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||| |||
Sbjct 545 TTACTGAAGTGTACCAAGCCAGAGAGAGTTTGGGATCTATATACTTTTGCATGCGGGCCT 604
Query 577 TCCAAATTTGGTAACACAAACCCAAAGGAAAGATTGCTTAATGAATATTTCCGTCTTCTC 636
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 605 TCCAAATTTGGTAACGCAAACCCAAAGGAAAGATTGCTTAATGAATATTTCCGTCTTCTC 664
Query 637 GGAAGAAGTTCAATACGAGCATCAATGGATATGATTGAAGATGGTTCGTTCACATTGTCC 696
|||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 665 GGAAAAAGTTCAATACGAGCATCAATGGATATGATTGAAGATGGTGCGTTCACATTGTCC 724
Query 697 AACGAGCTGTGGCGGATAAGCGACTTGAACTCCAATTACAACTTGTGTCAGACTTATCCA 756
|| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 725 AATGAGCTGTGGCGAATAAGCGACTTGAACTCCAATTACAACTTGTGTCAGACTTATCCA 784
Query 757 TTTGCTTTTATGGTTCCAAAATCCATAAGTGATGAAGAGCTGCTCCAGGCGTGTTCTTTC 816
|||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 785 TTTGCTTTTATGATTCCAAAATCCATAAGTGATGCAGAGCTGCTCCAGGCGTGTTCTTTC 844
Query 817 CGAGCAAGATGTCGCTTACCTGTGATCACGTGGTGTCAGCCAGGAAGTGGAGCTGTGATT 876
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 845 CGGGCAAGATGTCGCTTACCTGTGATCACATGGTGTCAGCCAGGAAGTGGAGCTGTGATT 904
Query 877 GCACGCTCATCACAACCTTTAGTGGGTCTTATGATGAATATGAGGAGTAATCTTGATGAA 936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 905 GCACGCTCATCACAACCTTTAGTGGGTCTTATGATGAATATGAGGAGTAATCTTGATGAA 964
Query 937 AAACTTGTTGCTGCATTCTGCTCTCAATTACCTGGTGCTAAGGGAGAACGAAGGAAGCTT 996
||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 965 AAACTAGTTGCTGCATTCTGCTCTCAGTTACCTGGTGCTAAGGGAGAACGAAGGAAGCTT 1024
Query 997 TATATTGCCGATGCAAGACCTAGGAAGAATGCATTAGCCAATGGAGCAATGGGAGGTGGC 1056
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1025 TATATTGCTGATGCAAGACCTAGGAAAAATGCATTAGCCAATGGAGCAATGGGAGGTGGC 1084
Query 1057 TCAGAATCATCTTCCAATTATTTTCAATCTGAAATTGTTTTCTTTGGCATAGACAACATA 1116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1085 TCAGAATCATCTTCCAATTATTTTCAATCTGAAATTGTTTTCTTTGGCATAGACAACATA 1144
Query 1117 CATGCAATGAGGGAGAGCTTTTCCCGCGTTAGAGATTATTTAGATATGCATGGTACAACA 1176
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1145 CATGCAATGAGGGAGAGCTTTTCCCGCGTTAGAGATTATTTAGATATGCACGGTACAACA 1204
Query 1177 TCATCTGATGGGAGATCATCGTTCTTGAGACACGGTGGTTGGACCTGGGGAGGAGGTAAT 1236
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1205 TCATCCGATGGGAGATCATCGTTCTTGAGACACGGTGGTTGGACCTGGGGAGGAGGTAAT 1264
Query 1237 CTTAGTAGTATGTCTGCTTCAGTATCTTTACTTGGAGATAGTGGCTGGTTGATACACATC 1296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1265 CTTAGTAGTATGTCTGCTTCAGTATCTTTACTTGGAGATAGTGGCTGGTTGATACACATC 1324
Query 1297 CAGAGCGTCTTAGCTGGTGCAGCATGGATAGCTGCACGTGTTGCTATGGAGTCGGCATCA 1356
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1325 CAGAGCGTCTTAGCTGGTGCAGCATGGATTGCTGCACGTGTTGCTATGGAGTCGGCATCA 1384
Query 1357 GTTCTTGTGCACTGCAGTGATGGGTGGGACAGAACAACTCAGCTTGTTTCTCTTGCATGC 1416
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 1385 GTTCTTGTGCACTGCAGTGATGGATGGGACAGAACAACTCAGCTTGTTTCTCTTGCGTGC 1444
Query 1417 TTATTGCTTGATCCATACTACAGAACTTTTGCTGGGTTTCAGGCTCTTGTCGAAAAGGAT 1476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1445 TTATTGCTTGATCCATACTACAGAACTTTTGCTGGGTTTCAGGCTCTTGTCGAAAAGGAT 1504
Query 1477 TGGCTTGCTTTTGGGCACCCATTTTCGGATCGTGTAGGAATGCCTAACATATCAGGATCT 1536
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1505 TGGCTTGCTTTTGGTCACCCATTTTCGGATCGTGTAGGAATGCCTAACATATCAGGATCT 1564
Query 1537 GGTAATTTTGACTTACCAAGGCACTCTTC 1565
|||||||||||||| || ||||| |||||
Sbjct 1565 GGTAATTTTGACTTTCCTAGGCAGTCTTC 1593
Score = 1589 bits (860), Expect = 0.0
Identities = 908/931 (98%), Gaps = 3/931 (0%)
Strand=Plus/Plus
Query 1560 CTCTTCCCATGGACATAACAATTATTCACCTATATTTATGCAGTGGATTGATAGCGTTTC 1619
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1663 CTCTTCCCATGGGCATAACAATTATTCACCTATATTTATGCAGTGGATTGATAGCGTTTC 1722
Query 1620 ACAGCTAATGCGGATGTATCCTTGTGCTTTTGAGTTTTCTCCGACTTTCCTGGTAGATTT 1679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1723 ACAGCTAATGCGGATGTATCCTTGTGCTTTTGAGTTTTCTCCGACTTTCCTGGTAGATTT 1782
Query 1680 TATGGATTGCTTGCTTTCATGTCGTTTTGGGAACTTCTTATGCAACAGTGAAAAAGAGAG 1739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1783 TATGGATTGCTTGCTTTCATGTCGTTTTGGGAACTTCTTATGCAACAGTGAAAAAGAGAG 1842
Query 1740 GGAACAATGTGGGATTGCTGATGCCTGTGGATGCCTATGGGCGTACTTGACTGATCTGCG 1799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1843 GGAACAATGTGGGATTGCTGATGCCTGTGGATGCCTATGGGCGTACTTGACTGATCTGCG 1902
Query 1800 TTCATTTAGTGCAACT-C--ATGTCCATTGTAACCCATTCTATGATCCTTTGAAATATGA 1856
|||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||
Sbjct 1903 TTCATTTAGTGCAACTTCTCATGTCCATTGTAACCCATTCTATGATCCTTTGAAGTATGA 1962
Query 1857 CGGCCCATTACTCCCACCAGCAGCATCTCTAGCTCCTACCCTTTGGCCCCAGTTCCATCT 1916
|||||||||||| || || |||||||||||||||||||||||||||||||||||||||||
Sbjct 1963 CGGCCCATTACTACCTCCTGCAGCATCTCTAGCTCCTACCCTTTGGCCCCAGTTCCATCT 2022
Query 1917 GCGGTGGGCTTGTCCCGAGGAAGCTAAAGCTGCAGATATCGGGGTCCAATGTAGAGCCAT 1976
|||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||
Sbjct 2023 CCGGTGGGCTTGTCCTGAGGAAGCTAAAGCTGCAGATATTGGAGTCCAATGTAGAGCCAT 2082
Query 1977 GACAGTGAAATATTCTGAAATGCAAAAGGAGAAAGAAGCAGCAGAAAGAAGAGTGGACGA 2036
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2083 GACAGTGAAATATTCCGAAATGCAAAAGGAGAAAGAAGCAGCAGAAAGAAGAGTGGACGA 2142
Query 2037 GATATCTTTCGCAATGGAGTCATTAAGTGCAGAGTTGCTAAGAGAAAGGCATTTGAGTTG 2096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2143 GATATCTTTCGCAATGGAGTCATTAAGTGCAGAGTTGCTAAGAGAAAGGCATTTGAGTTG 2202
Query 2097 GGTAGCTAGAGAATCAGCAAATCGAGCTACCAAGGAATATGCAGCTTTAACCCGAGCAGT 2156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2203 GGTAGCTAGAGAATCAGCAAATCGAGCTACCAAGGAATATGCAGCTTTAACCCGAGCAGT 2262
Query 2157 ACAATCACTCGGGTGCAAGATTAACTTCACCACGTCTGATGTCGAAGATGACCCAAGGAG 2216
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2263 ACAATCACTCGGGTGCAAGATTAACTTCACCACATCTGATGTCGAAGATGACCCAAGGAG 2322
Query 2217 TTCTCTGGAGAATAACCCTAGGAGACGAAACAGACACGGGAACAATTCAGATGTTTCTGT 2276
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2323 CTCTCTGGAGAATAACCCTAGGAGACGAAACAGACACGGGAACAACTCAGATGTTTCTGT 2382
Query 2277 ATCAATCTCACTGATGTCTGAAGAAAATACATCTGGGAACCCGATAGGACGAGTTTGTGA 2336
|||||||||||| ||| ||||||||||||||||||| ||||||| ||| |||||||||||
Sbjct 2383 ATCAATCTCACTAATGCCTGAAGAAAATACATCTGGAAACCCGAAAGGGCGAGTTTGTGA 2442
Query 2337 AGCGTTGTGTCCATTGCGTACAAGAGAAGGAGTATGTCGATGGCCTGAAGTTGGATGTGC 2396
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2443 AGCGTTGTGTCCATTGCGTACAAGAGAAGGAGTATGTCGATGGCCTGAAGTAGGATGTGC 2502
Query 2397 TCATGTCGGAAGTCAGTTTGTCGGGTTAAAAGCAAATTTTGATGCGTTTGATCGGCTTGC 2456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2503 TCATGTCGGAAGTCAGTTTGTCGGGTTAAAAGCAAATTTTGATGCGTTTGATCGGCTTGC 2562
Query 2457 CATCTACGATAGCTATTTCCAACCTGAATGA 2487
||||||||||||||||||||||||| |||||
Sbjct 2563 CATCTACGATAGCTATTTCCAACCTAAATGA 2593
Score = 99.0 bits (53), Expect = 2e-19
Identities = 67/73 (92%), Gaps = 3/73 (4%)
Strand=Plus/Plus
Query 30 GAAGCCTCGTCACCGTCTCTTTATCTCCC---TTTCTCATGACGCCGCCGAGACCACCGT 86
|||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||
Sbjct 33 GAAGCCTCGTCACCGTCTCTTTCTCTCCCCCCTTTTTCATGACGCCGCCGAGACCACCGT 92
Query 87 CTGGGCGAGCAAG 99
||||||||| |||
Sbjct 93 CTGGGCGAGTAAG 105
> AT5G04540.1 | Symbols: | Myotubularin-like phosphatases II superfamily
| chr5:1296442-1302444 REVERSE LENGTH=3031
Length=3031
Score = 1589 bits (860), Expect = 0.0
Identities = 1289/1491 (86%), Gaps = 49/1491 (3%)
Strand=Plus/Plus
Query 93 GAGCAAGATGGATGGTACCGGTAGTTGGGACACGCTTGAATGGACCAAACTCGATTCAGC 152
||| |||||||| |||||||| || |||||| |||||||||||| ||||||||||||||
Sbjct 200 GAG-AAGATGGAAGGTACCGGAAGCTGGGACGTGCTTGAATGGACTAAACTCGATTCAGC 258
Query 153 TTCAGGGTCAGGGTCAGGTTCAGGTTCTTTCTCGAATTT-GAGTTGCTTGCTGGAATCGG 211
|||| | ||||||| || | | | |||||||| || ||||||||||||||| |
Sbjct 259 TTCA---T---GGTCAGGCTC--G---TAT-TCGAATTTGGA-TTGCTTGCTGGAATCTG 305
Query 212 AGAGGGTCATCGTCGAGGGTTATGGAGTTGTTCTTATTAACACCGACGAAGCAGGAACTC 271
||||| ||||| |||||| || ||||||| |||| ||||||||||| || ||||| || |
Sbjct 306 AGAGGATCATCTTCGAGGCTTGTGGAGTTATTCTCATTAACACCGATGAGGCAGGGACCC 365
Query 272 TATTGGTGA-CAAATTTCCGTATTCT-TTTTCTGAGTGAAGGAACCAGAAAAG-TCATTC 328
| || || | |||||||||||||||| |||| |||||||||||||||| |||| | |||
Sbjct 366 TCTT-GTTATCAAATTTCCGTATTCTGTTTT-TGAGTGAAGGAACCAG-AAAGCTTGTTC 422
Query 329 CACTTGGAACCATTCCATTGGCAACTATTGAGAAGTTTAACAAAATGGTGCTGAAAGTTC 388
||||||| || |||||||| | | |||| ||||||||||||||| ||| || ||||||||
Sbjct 423 CACTTGGTACAATTCCATTTGTAGCTATCGAGAAGTTTAACAAACTGGCGCCGAAAGTTC 482
Query 389 AATCAAGCCCCCGTCAGTCTGAC-A--AGAATCCACCAAGACGTCTTTTACAGGTCACTG 445
|||||| | ||| | || | ||||| |||| | ||| ||||||||||||||||
Sbjct 483 AATCAAACAAATATCA--C-AACAATGAGAATGCACCGACACGACTTTTACAGGTCACTG 539
Query 446 GCAAAGACATGAGGATAATTGTTTATGGCTTTCGTCCTCGCACCAAGCAGAGACGTAATG 505
| ||||| ||||| ||| |||| ||||| ||||| ||| | ||||||||||||| || ||
Sbjct 540 GAAAAGATATGAGAATAGTTGTCTATGGTTTTCGACCTGGTACCAAGCAGAGACATACTG 599
Query 506 T-GTTTGATGCATTACTGAAGTGTAGCAAGCCAGAGAGAGTATGGGATCTATATACGTTT 564
| | ||||| | || ||| ||||| ||| |||||||||||||||||||| ||| | |||
Sbjct 600 TAG-TTGATACGCTATTGAGGTGTAACAAACCAGAGAGAGTATGGGATCTTTATGCTTTT 658
Query 565 GCATGCGGTCCTTCCAAATTTGGTAACACAAACCCAAAGGAAAGATTGCTTAATGAATAT 624
||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct 659 ACATGCGGACCTTCCCAATTCGGTAACACAAACCCAAAGGAAAGATTGCTTAATGAATAT 718
Query 625 TTCCGTCTTCTCGGAAGAAGTTCA-ATACGAGCATCAATGGATATGATTGAAGATGGTTC 683
|| || |||||||||| ||||||| | |||||| |||||| ||||||||||||| |||||
Sbjct 719 TTTCGCCTTCTCGGAAAAAGTTCACA-ACGAGCGTCAATGAATATGATTGAAGACGGTTC 777
Query 684 GTTCACAT-TGTCCAACGAGCTGTGGCGGATAAGCGA-CTTGAACTCCAATTACAACTTG 741
||||| | | ||||| || || ||||| |||| | | ||| ||||| ||||| |||||
Sbjct 778 ATTCAC-TCTATCCAATGATCTTTGGCGTATAA-CTAACTTAAACTCAAATTATGACTTG 835
Query 742 TGTCAGACTTATCCATTTGCTTTTATGGTTCCAAAATCCATAAGTGATGAAGAGCTGCTC 801
|| |||| |||||| |||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct 836 TGCCAGAGTTATCCGTTTGCTTTGATGGTTCCAAAATCCATTAGTGATGAAGAGCTGCTC 895
Query 802 CAGGCGTGTTCTTTCCGAGCAAGATGTCGCTTACCTGTGATCACGTGGTGTCAGCCAGGA 861
||| | | | ||||||| |||||||||||||||||||||||| |||||||||| ||||||
Sbjct 896 CAGACTTCTACTTTCCGGGCAAGATGTCGCTTACCTGTGATCTCGTGGTGTCATCCAGGA 955
Query 862 AGTGGAGCTGTGATTGCACGCTCATCACAACCTTTAGTGGGTCTTATGATGAATATGAGG 921
||||||||||||||||| |||||||||||||||||||| ||||| |||||||| ||||||
Sbjct 956 AGTGGAGCTGTGATTGCTCGCTCATCACAACCTTTAGTTGGTCTGATGATGAACATGAGG 1015
Query 922 AGTAA-TCTTGATGAAAAACTTGTTGCTGCATTCTGCTCTCAATTACCTGGTGC-TAAGG 979
||||| ||| ||||| |||||||||||| |||||||| |||||||| ||||| | |||||
Sbjct 1016 AGTAACTCT-GATGAGAAACTTGTTGCTTCATTCTGCACTCAATTAGCTGGT-CATAAGG 1073
Query 980 GAGAACGAAGGAAGCTTTATATTGCCGATGCAAGACCTAGGAAGAATGCATTAGCCAATG 1039
||| |||||||||||||||||| | ||||||||||||||||| ||||||||||| ||||
Sbjct 1074 GAGCACGAAGGAAGCTTTATATCGTAGATGCAAGACCTAGGAAAAATGCATTAGCAAATG 1133
Query 1040 GAGCAATGGGAGGTGGCTCAGAATCATCTTCCAATTATTTTCAATCTGAAATTGTTTTCT 1099
|||||| |||||| ||||||||||||||||| |||||||| ||||||||||||||||| |
Sbjct 1134 GAGCAAAGGGAGGAGGCTCAGAATCATCTTCAAATTATTTGCAATCTGAAATTGTTTT-T 1192
Query 1100 TTGGC-ATAGACAACATACATGCAATGAGGGAGAGCTTTTCCCGCGTTAGAGATTATTTA 1158
|||| ||||||||||||||||||||||| ||||||||||||||| |||| |||||||||
Sbjct 1193 TTGGGGATAGACAACATACATGCAATGAGAGAGAGCTTTTCCCGCCTTAGGGATTATTTA 1252
Query 1159 GATATGCATGGTACAACATCATCTGATGGGA-GATCATCGTTCTTGAGACACGGTGGTTG 1217
||||||||||||||||||||||| ||||||| | ||||| |||||||| || ||||| ||
Sbjct 1253 GATATGCATGGTACAACATCATCCGATGGGACG-TCATCATTCTTGAGGCATGGTGGCTG 1311
Query 1218 GACCTGGGGAGGAGGTAATCTTAGTAGTATGTCTGCTTCAGTATCTTTACTTGGAGATAG 1277
||| ||||| ||||||||||| ||||||||||||||||||||||| | |||||||||||
Sbjct 1312 GACGTGGGGTGGAGGTAATCTCAGTAGTATGTCTGCTTCAGTATCCGTGCTTGGAGATAG 1371
Query 1278 TGGCTGGTTGA-TACACATCCAGAGCGTCTTAGCTGGTGCAGCATGGATAGCTGCACGTG 1336
||| ||||||| | ||||| |||||| |||||||||||| ||||||||| ||||||||||
Sbjct 1372 TGGTTGGTTGAGT-CACATTCAGAGCATCTTAGCTGGTGTAGCATGGATTGCTGCACGTG 1430
Query 1337 TTGCTATGGAGTCGGCATCAGTTCTTGTGCACTGCAGTGATGGGTGGGACAGAACAACTC 1396
||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1431 TTGCTATGGAGTCAGCATCAGTTCTTGTGCACTGCAGTGATGGATGGGACAGAACAACTC 1490
Query 1397 AGCTTGTTTCTCTTGCATGCTTATTGCTTGATCCATACTACAGAAC-TTTTGCTGGGTTT 1455
|||| ||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||
Sbjct 1491 AGCTGGTTTCTCTTGCATGCTTATTGCTTGATCCTTACTACAGAACATTTT-CTGGGTTT 1549
Query 1456 CAGGCTCTTGTCGAAAAGGATTGGCT-TGCTTTTGGGCACCCATTTTCGGATCGTGTAGG 1514
|||||||||||||||||||||||| | | | ||||| ||||||||||||||||| || ||
Sbjct 1550 CAGGCTCTTGTCGAAAAGGATTGGTTAT-CATTTGGTCACCCATTTTCGGATCGGGTGGG 1608
Query 1515 AATGCCTAACATATCAGGATCTGGTAATTTTGACTTACCAAGGCACTCTTC 1565
|||||| ||| | || | ||||||||||||||| ||||||| || |||||
Sbjct 1609 AATGCCAAACGTGTCTGAATCTGGTAATTTTGAATTACCAATTCAGTCTTC 1659
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 123410679780
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5