BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg318121 Length=216 Score E Sequences producing significant alignments: (Bits) Value AT3G13435.1 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 344 2e-94 > AT3G13435.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 4 Blast hits to 4 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:4375425-4376069 FORWARD LENGTH=356 Length=356 Score = 344 bits (186), Expect = 2e-94 Identities = 206/216 (95%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 1 ATGAACTGGAAGTTGGTTTTGCTATTTGGTTGGATTCTCCTCTCGTCTATTGCATCAAAC 60 ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 17 ATGAATTGGAAGTTGGTTTTGCTAATTGGTTGGATTCTCCTCTCGTCTATTGCATCAAAC 76 Query 61 CCAACTTTGGCTAAAGTAACATATCCACCTCGCACGACAAGAAAAGGGCTTGGAAATATA 120 ||| ||||||||||||| || |||||| ||||||| ||||||||| |||||||||||||| Sbjct 77 CCAGCTTTGGCTAAAGTTACTTATCCAACTCGCACAACAAGAAAATGGCTTGGAAATATA 136 Query 121 CACATCAACAAAGGAATGAAGATTGGCTTTACAGGCAGTTTTTCTAGACCTGCTCCTCAC 180 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 137 CACATCAGCAAAGGAATGAAGATTGGCTTTACAGGCAGTTTTTCTAGACCTGCTCCTCAC 196 Query 181 GGAGGCGGTCCACCGAAGATCATTTCTAAGTTGTGA 216 |||||||||||||||||||||||||||||||| ||| Sbjct 197 GGAGGCGGTCCACCGAAGATCATTTCTAAGTTATGA 232 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 9651407808 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5