BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg318190 Length=1350 Score E Sequences producing significant alignments: (Bits) Value AT3G14040.1 | Symbols: | Pectin lyase-like superfamily protein... 2017 0.0 AT3G07850.1 | Symbols: | Pectin lyase-like superfamily protein... 1936 0.0 > AT3G14040.1 | Symbols: | Pectin lyase-like superfamily protein | chr3:4648348-4650319 REVERSE LENGTH=1690 Length=1690 Score = 2017 bits (1092), Expect = 0.0 Identities = 1273/1357 (94%), Gaps = 26/1357 (2%) Strand=Plus/Plus Query 1 ATGGTGGGTTTTCGCAGAGCAAGCGGAGTGCTTCTTGTGGTATTAGTGGTTATGGCCACC 60 |||||||||| || || |||||||||||||||||||||| || ||||||||||||||||| Sbjct 94 ATGGTGGGTTCTCACAAAGCAAGCGGAGTGCTTCTTGTGCTACTAGTGGTTATGGCCACC 153 Query 61 ACAATAGTAAACGGGACACCGGTTGTCGATAAAGCAAAAGATGCAGCTGA-ATCAGTTGG 119 ||||||| |||||||||||| |||||||||| ||||||| |||||||| | | |||||| Sbjct 154 ACAATAGCAAACGGGACACCTGTTGTCGATACAGCAAAAAATGCAGCT-ACAGCAGTTGA 212 Query 120 CGATAAAGTCAGTGAA-GCAGCTACAACAGTTGGCGATAAAGCAAAAAATGCAGCTGCAT 178 |||| || || || ||||||||| ||||||||| | ||||||||||| Sbjct 213 AGATACAG-CAAAAAATGCAGCTACAGCAGTTGGCG-----G-------TGCAGCTGCAT 259 Query 179 CAGTTGGTGTTAAAGTACCAGGAGCCAAAGCAGGCGGTGCATCACTTGATATTAAAGCAT 238 ||||||||| ||||||| |||| |||||| |||||||||||||||||||| ||||||||| Sbjct 260 CAGTTGGTGCTAAAGTAACAGGTGCCAAACCAGGCGGTGCATCACTTGATGTTAAAGCAT 319 Query 239 CAGGAGCTAAAGGAGATGGTAAAACTGATGACAGTGCGGCATTTGCGGCTGCATGGAAAG 298 ||||||| |||||||| || ||||||||||| |||||||||||||||||||||||||||| Sbjct 320 CAGGAGCCAAAGGAGACGGCAAAACTGATGATAGTGCGGCATTTGCGGCTGCATGGAAAG 379 Query 299 AAGCATGTGCAGCAGGGAGCACGATTACAGTGCCAAAAGGTGAGTATTTGGTAGAGAGCC 358 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 380 AAGCTTGTGCAGCAGGGAGCACGATTACAGTGCCAAAAGGTGAGTATTTGGTAGAGAGCC 439 Query 359 TAGAGTTCAAAGGTCCATGCAAAGGTCCAGTCACTTTGGAATTGAATGGCAATCTTAAGG 418 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 440 TAGAGTTCAAAGGTCCATGCAAAGGTCCAGTCACTTTGGAATTGAATGGCAATTTTAAGG 499 Query 419 CTCCGGCTACGGTCAAGACCTCTAAACCTCATTCCGGATGGATTGATTTCGAAAA-CATC 477 |||||||||||||||||||| |||| |||||| |||||||||||||||||||||| | || Sbjct 500 CTCCGGCTACGGTCAAGACCACTAAGCCTCATGCCGGATGGATTGATTTCGAAAATC-TC 558 Query 478 GCTGATTTCACTTTGAATGGAAACGGAGCCATTTTTGACGGTCAAGGTTCCCTCGCTTGG 537 |||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||| Sbjct 559 GCTGATTTCACTTTGAATGGAAACAAAGCTATTTTTGACGGTCAAGGGTCCCTCGCTTGG 618 Query 538 AAGGCCAATGACTGCGCCAAAACCGGCAAATGCAACTCTCTCCCCATCAACATCCGATTC 597 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 619 AAGGCCAATGACTGCGCCAAAACCGGCAAATGCAACTCTCTCCCTATCAACATCCGATTC 678 Query 598 ACGGGTCTAACAAACTCGAAA-ATTAAGAGTATTACATCAACAAACAGCAAACTTTTCCA 656 || |||||||||||||| ||| ||||| ||||||||||||||||||||||| |||||||| Sbjct 679 ACTGGTCTAACAAACTC-AAAGATTAACAGTATTACATCAACAAACAGCAAGCTTTTCCA 737 Query 657 CATGAACATCCTTAACTGCAAAAACATAACTCTTGA-GGATATTGGTATTGATGCACCTC 715 ||||||||||||||||||||| |||||||||||| | |||||| |||||||||||||||| Sbjct 738 CATGAACATCCTTAACTGCAAGAACATAACTCTT-ACGGATATCGGTATTGATGCACCTC 796 Query 716 CGGAGAGTCTCAACACCGATGGGATCCACATCGGAAGGTCCAATGGCGTCAACTT-ATTA 774 |||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| Sbjct 797 CGGAGAGTCTCAACACCGATGGTATCCACATCGGAAGGTCCAATGGAGTCAACTTAATT- 855 Query 775 GGGGCAAAGATTAAAACCGGAGATGACTGCGTTTCCATTGGAGATGGTACCGAAAATCTC 834 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 856 GGGGCAAAGATTAAAACCGGAGATGACTGCGTTTCCATTGGAGATGGTACCGAAAATCTC 915 Query 835 ATTGTTGAGAACGTAGAATGTGGACCGGGACACGGAATTTCCATTGGAAGTCTCGGAAGA 894 |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct 916 ATTGTTGAGAACGTAGAATGTGGACCAGGACACGGAATTTCCATTGGAAGTCTTGGAAGA 975 Query 895 TACCCTAATGAGCAACCAGTAAAAGGAGTCACTGTGAGGAAATGCCTCATCAAGAACACT 954 ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 976 TACCCTAATGAACAACCAGTAAAAGGAGTCACCGTGAGGAAATGCCTCATCAAGAACACT 1035 Query 955 GACAATGGTGTTCGCATCAAGACATGGCCAGGATCTCCCCCCGGTATCGCCTCCAACATT 1014 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1036 GACAATGGTGTTCGCATCAAGACATGGCCAGGATCTCCCCCCGGTATCGCCTCCAACATT 1095 Query 1015 CTTTTCGAAGATATCACAATGGACAATGTTAGCACC-CCCGTTCTCATCGACCAAGAGTA 1073 ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct 1096 CTTTTCGAAGATATCACAATGGACAATGTTAGC-CTTCCCGTTCTCATCGACCAAGAGTA 1154 Query 1074 CTGTCCTTATGGCCACTGCAAAGCTGGGGTACCATCGAAAGTGAAGTTGTCGGACGTGAC 1133 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1155 CTGTCCTTATGGCCACTGCAAAGCTGGGGTACCATCGAAAGTGAAGTTGTCAGACGTGAC 1214 Query 1134 TATCAAGAACATTAAGGGTACATCAGCAACAAAGGTGGCTGTGAAGCTAATGTGCAGTAA 1193 |||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| || Sbjct 1215 TATCAAGAACATTAAGGGAACATCAGCAACAAAGGTAGCAGTGAAGCTAATGTGCAGCAA 1274 Query 1194 AGGCGTTCCTTGCACCAATATTGCTCTCGCTGACATCAACTTGGTCCACAACGGCAAAGA 1253 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1275 AGGCGTTCCTTGCACCAATATTGCTCTCTCTGACATCAACTTGGTCCACAACGGCAAAGA 1334 Query 1254 GGGACCAGCTGTCTCGGCATGTTCTAACATCAAGCCTATTCTCTCCGGAAAGTTGGTTCC 1313 ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1335 GGGACCAGCTGTCTCAGCATGTTCTAACATCAAGCCTATTCTCAGCGGAAAGTTGGTTCC 1394 Query 1314 AGCGGCTTGCACTGAAGTCGCTAAAACGGGTCCTTAA 1350 ||||||||||||||||||||||||| ||||||||||| Sbjct 1395 AGCGGCTTGCACTGAAGTCGCTAAACCGGGTCCTTAA 1431 > AT3G07850.1 | Symbols: | Pectin lyase-like superfamily protein | chr3:2505547-2507528 REVERSE LENGTH=1691 Length=1691 Score = 1936 bits (1048), Expect = 0.0 Identities = 1258/1356 (93%), Gaps = 27/1356 (2%) Strand=Plus/Plus Query 1 ATGGTGGGTTTTCGCAGAGCAAGCGGAGTGCTTCTTGTGGTATTAGTGGTTATGGCCACC 60 |||||||||| || || |||||||||||||||||||||| || ||||||||||||||||| Sbjct 91 ATGGTGGGTTCTCACAAAGCAAGCGGAGTGCTTCTTGTGCTACTAGTGGTTATGGCCACC 150 Query 61 ACAATAGTAAACGGGACACCGGTTGTCGATAAAGCAAAAGATGCAGCTGA-ATCAGTTGG 119 ||||||| ||||||||||||||||||||||||||||||| |||||||| | | |||||| Sbjct 151 ACAATAGCAAACGGGACACCGGTTGTCGATAAAGCAAAAAATGCAGCT-ACAGCAGTTGA 209 Query 120 CGATAAAGTCAGTGAA-GCAGCTACAACAGTTGGCGATAAAGCAAAAAATGCAGCTGCAT 178 |||| || || || ||||||||| ||||||||| | ||||||||||| Sbjct 210 AGATACAG-CAAAAAATGCAGCTACAGCAGTTGGCG-----G-------TGCAGCTGCAT 256 Query 179 CAGTTGGTGTTAAAGTACCAGGAGCCAAAGCAGGCGGTGCATCACTTGATATTAAAGCAT 238 ||||||||| ||||||| |||| |||||| ||||| ||| || ||||| ||||||||| Sbjct 257 CAGTTGGTGCTAAAGTATCAGGTGCCAAACCAGGC---GCAGCAGTTGATGTTAAAGCAT 313 Query 239 CAGGAGCTAAAGGAGATGGTAAAACTGATGACAGTGCGGCATTTGCGGCTGCATGGAAAG 298 ||||||| |||||||| | ||||||||||| |||||||||||||||||||||||||||| Sbjct 314 CAGGAGCCAAAGGAGACAGCAAAACTGATGATAGTGCGGCATTTGCGGCTGCATGGAAAG 373 Query 299 AAGCATGTGCAGCAGGGAGCACGATTACAGTGCCAAAAGGTGAGTATTTGGTAGAGAGCC 358 |||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct 374 AAGCTTGTGCAGCAGGGAGCACAATTACAGTGCCAAAAGGTGAGTATATGGTAGAGAGCC 433 Query 359 TAGAGTTCAAAGGTCCATGCAAAGGTCCAGTCACTTTGGAATTGAATGGCAATCTT-AAG 417 ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct 434 TAGAGTTCAAAGGTCCATGCAAAGGTCCAGTCACTTTGGAATTGAATGGCAAT-TTCAAG 492 Query 418 GCTCCGGCTACGGTCAAGACCTCTAAACCTCATTCCGGATGGATTGATTTCGAAAACATC 477 ||||||||||||||||||||| |||| || ||| |||||||||||||||||||||| || Sbjct 493 GCTCCGGCTACGGTCAAGACCACTAAGCCACATGCCGGATGGATTGATTTCGAAAATATA 552 Query 478 GCTGATTTCACTTTGAATGGAAACGGAGCCATTTTTGACGGTCAAGGTTCCCTCGCTTGG 537 |||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||| Sbjct 553 GCTGATTTCACTTTGAATGGAAACAAAGCTATTTTTGACGGTCAAGGGTCCCTCGCTTGG 612 Query 538 AAGGCCAATGACTGCGCCAAAACCGGCAAATGCAACTCTCTCCCCATCAACATCCGATTC 597 ||||||||||| || |||||||| |||||||||||||||||||| ||||||||||||||| Sbjct 613 AAGGCCAATGATTGTGCCAAAACTGGCAAATGCAACTCTCTCCCTATCAACATCCGATTC 672 Query 598 ACGGGTCTAACAAACTCGAAA-ATTAAGAGTATTACATCAACAAACAGCAAACTTTTCCA 656 || |||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||| Sbjct 673 ACTGGTCTAACAAACTC-AAAGATTAATAGTATTACATCAACAAACAGCAAACTTTTCCA 731 Query 657 CATGAACATCCTTAACTGCAAAAACATAACTCTTGAGGATATTGGTATTGATGCACCTCC 716 ||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||| Sbjct 732 CATGAACATCCTTAACTGCAAGAACATTACTCTTTCGGATATTGGTATTGATGCACCTCC 791 Query 717 GGAGAGTCTCAACACCGATGGGATCCACATCGGAAGGTCCAATGGCGTCAACTT-ATTAG 775 ||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| | Sbjct 792 GGAGAGTCTCAACACCGATGGTATCCACATCGGAAGGTCCAATGGAGTCAACTTAATT-G 850 Query 776 GGGCAAAGATTAAAACCGGAGATGACTGCGTTTCCATTGGAGATGGTACCGAAAATCTCA 835 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 851 GGGCAAAGATCAAAACCGGAGATGACTGCGTTTCCATTGGAGATGGTACCGAAAATCTCA 910 Query 836 TTGTTGAGAACGTAGAATGTGGACCGGGACACGGAATTTCCATTGGAAGTCTCGGAAGAT 895 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct 911 TTGTTGAGAACGTAGAATGTGGACCAGGACACGGAATTTCCATTGGAAGTCTTGGAAGAT 970 Query 896 ACCCTAATGAGCAACCAGTAAAAGGAGTCACTGTGAGGAAATGCCTCATCAAGAACACTG 955 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 971 ACCCTAATGAGCAACCAGTAAAAGGAGTCACCGTGAGGAAATGCCTCATCAAGAACACTG 1030 Query 956 ACAATGGTGTTCGCATCAAGACATGGCCAGGATCTCCCCCCGGTATCGCCTCCAACATTC 1015 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1031 ACAATGGTGTTCGCATCAAGACATGGCCAGGATCTCCCCCCGGCATCGCCTCCAACATTC 1090 Query 1016 TTTTCGAAGATATCACAATGGACAATGTTAGCACC-CCCGTTCTCATCGACCAAGAGTAC 1074 |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct 1091 TTTTCGAAGATATCACAATGGACAATGTTAGC-CTTCCCGTTCTCATCGACCAAGAGTAC 1149 Query 1075 TGTCCTTATGGCCACTGCAAAGCTGGGGTACCATCGAAAGTGAAGTTGTCGGACGTGACT 1134 |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 1150 TGTCCTTATGGCCACTGCAAAGCTGGGGTACCATCGCAAGTGAAGTTGTCAGACGTGACT 1209 Query 1135 ATCAAGAACATTAAGGGTACATCAGCAACAAAGGTGGCTGTGAAGCTAATGTGCAGTAAA 1194 |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1210 ATCAAGGGCATTAAGGGTACATCAGCAACAAAGGTGGCTGTGAAGCTAATGTGCAGCAAA 1269 Query 1195 GGCGTTCCTTGCACCAATATTGCTCTCGCTGACATCAACTTGGTCCACAACGGCAAAGAG 1254 || || ||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1270 GGAGTGCCTTGCACCAATATTGCTCTCTCTGACATCAACTTGGTCCACAACGGCAAAGAG 1329 Query 1255 GGACCAGCTGTCTCGGCATGTTCTAACATCAAGCCTATTCTCTCCGGAAAGTTGGTTCCA 1314 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1330 GGACCAGCTGTCTCGGCATGTTCTAACATCAAGCCTATTCTCAGCGGAAAGTTGGTTCCA 1389 Query 1315 GCGGCTTGCACTGAAGTCGCTAAAACGGGTCCTTAA 1350 ||||||||||||||||| |||||| ||||||| ||| Sbjct 1390 GCGGCTTGCACTGAAGTTGCTAAACCGGGTCCATAA 1425 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 66465521580 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5