BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg318448 Length=2496 Score E Sequences producing significant alignments: (Bits) Value AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosp... 3542 0.0 > AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr3:5737886-5743144 REVERSE LENGTH=2717 Length=2717 Score = 3542 bits (1918), Expect = 0.0 Identities = 2260/2427 (93%), Gaps = 16/2427 (1%) Strand=Plus/Plus Query 1 ATGGTTGCAGGCGGCAAGGAATCTTCCTTGATGATGAAGAAGAACAAGAGAAGCCATAAG 60 |||||| |||||| || |||||||||||||||| ||||| ||||||||||||||||||| Sbjct 103 ATGGTTACAGGCGATAAAGAATCTTCCTTGATGAAGAAGAGGAACAAGAGAAGCCATAAG 162 Query 61 AGAAAGCGTGAGGAGGATTTCGAACGTATAGATTCACTTCCGTGGAGCTCTTCAATACCT 120 |||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct 163 AGAAAGCGAGAGGAGGATTTCGAACGTATAGATTCACTTCCTTGGAGCTCTTCTATACCC 222 Query 121 ATCGGAGAAGACGACGAAGGCGAAACCTTCTCCACTCTATTTTCAGGCTCAGGCCAGCTC 180 || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 223 ATTGGAGAAGACGACGAAGGCGAATCCTTCTCCACTCTATTTTCAGGCTCAGGCCAGCTC 282 Query 181 GACGGAGGTTTTCTTTCACTTGAGGAGATTGATGAAGCTGATTACCATCTAGCTCTTCCT 240 |||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||| Sbjct 283 GACGGAGGTTTTCTATCACTTGAGGAGATTGATGAAGCTGATTACCATCTAACTCTCCCT 342 Query 241 ACGGTTGAAAATGGAATAACAGAGAGAAAACAAGCTCAAGAAGACGATGATGATACCAAC 300 || |||||| || ||||||||||||||||||| ||| |||||| ||||||||||||||| Sbjct 343 ACCATTGAAAGTGAAATAACAGAGAGAAAACAATCTCCAGAAGATGATGATGATACCAAC 402 Query 301 GAGACTGTTGATGAGATAATTCAAGGCGAAGGAGAAGAAGAAGATGGAGAA-GAA---AT 356 ||||| || |||||||| ||| |||| |||| || ||||||||||||||| ||| || Sbjct 403 GAGACAGTGGATGAGATGATTGAAGGAGAAGAAGCTGAAGAAGATGGAGAAGGAAGGGAT 462 Query 357 G--GA--A-GACGAGGATGACTCTGAGAGTCGtaagataagagagaagaaaactaagaag 411 | || | ||||| |||||| |||| |||||||| || |||||||||| |||||| | Sbjct 463 GATGAGGATGACGAAGATGACGAGGAGACTCGTAAGAAAAAAGAGAAGAAAGCTAAGAGG 522 Query 412 aataaggagaagaaaaaggagaagaagaagaagaaacagaagaagaTTAAGGAGGCTGAA 471 ||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||| | | Sbjct 523 AATAAGGAGAAGAAAAAAGAGAAGAAGAAGAAGAAGCAGAAGAAGATTAATGAGGCCGCA 582 Query 472 AAGGATCAGGACACTTCTGATGCAGTTAGCTGTGATGAAGATTACAAAGTAGAGGAGCAA 531 ||| |||||||| |||| ||| ||||||||||||| |||| ||| ||||||||||||| Sbjct 583 AAGAATCAGGACGCTTC---TGCTGTTAGCTGTGATGGAGATGACACAGTAGAGGAGCAA 639 Query 532 GTTGAGGGAGAAGAGATTCCTCCGGAATTTAGTGCATGGAGTTTGATGAGACTCCATCCA 591 ||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||| Sbjct 640 GTTGAGGAAGAAGAGATTCCTCCAGAATTTAGTGCATGGAGTTCGATGAGACTCCATCCA 699 Query 592 CTACTCATGAAGTCAATATACCACCTTGGA-TTCAAGCAGCCGACAGAAATTCAGAAGGC 650 |||||||||||||| ||||||| || | || |||||| |||| ||| |||| |||||||| Sbjct 700 CTACTCATGAAGTCCATATACCGCC-TCGATTTCAAGGAGCCAACAAAAATCCAGAAGGC 758 Query 651 TTGTTTTTCCATTGCAGCATATCAGGGAAAGGATGTTATTGGTGCTGCGGAGACAGGATC 710 ||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 759 TTGTTTTAACGTTGCAGCATATCAGGGAAAGGATGTTATTGGTGCTGCAGAGACAGGATC 818 Query 711 TGGAAAGACTCTTGCTTTTGGGTTGCCCATACTGCAACGCCTCTTAGACGAACGGGAAAA 770 ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 819 TGGAAAGACACTTGCTTTTGGGTTGCCCATACTGCAACGCCTCTTAGACGAGCGGGAAAA 878 Query 771 GGTTGGTAAATTGTATGCATTGAAGGGAGAAAAAGCACAGAAATATGCTGCAGATGGCTA 830 ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct 879 GGTTGGTAAATTGTATGCATTAAAGGGAGAAGAAGCACAGAAATATGCTGCAGATGGCTA 938 Query 831 TTTACGAGCTCTAATCATCACTCCAACTAGGGAACTTGCTCTTCAGGTGACGGATCATCT 890 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 939 TTTACGAGCTCTAATCATCACTCCAACTAGGGAACTTGCTCTTCAGGTGACGGAGCATCT 998 Query 891 TAAGAATGCTGCCAAGAATCTCAACGTCAAGGTCGTTCCTATTGTTGGTGGGATGTCATC 950 | ||||||||||||||||||| | |||||||||||||||||||||||||||||||| || Sbjct 999 TGAGAATGCTGCCAAGAATCTTAGCGTCAAGGTCGTTCCTATTGTTGGTGGGATGTTTTC 1058 Query 951 AGCGAAGCAGGAAAGACTTTTAAAAGGGAAACCTGAAATAGTTGTTGGAACTCCAGGAAG 1010 || |||||||||||||| |||||||| |||||||||||||||||||| |||||||||||| Sbjct 1059 AGAGAAGCAGGAAAGACGTTTAAAAGAGAAACCTGAAATAGTTGTTGCAACTCCAGGAAG 1118 Query 1011 GTTGTGGGAACTTATGTCCGCTGGAGAAAAGCATCTTGTAGAGCTGCATTCCTTATCGTT 1070 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1119 GTTATGGGAACTTATGTCCGCTGGAGAAAAGCATCTTGTAGAGCTGCATTCCTTGTCGTT 1178 Query 1071 CTTTGTGTTGGACGAGGCTGATCGCATGGTTGAAAGTGGTCATTTCAGGGAGCTGCAGTC 1130 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1179 CTTTGTGTTGGACGAGGCTGATCGCATGGTTGAAAGAGGTCATTTCAGGGAGCTGCAGTC 1238 Query 1131 TATAATTGACTTGCTTCCAGTGACAGATAGACCAAATGAAGGGAAAATGCAAACTGTGCA 1190 |||| | |||||||||||||||||||||| ||||||||||||||||| |||||||||| | Sbjct 1239 TATACTCGACTTGCTTCCAGTGACAGATAAACCAAATGAAGGGAAAACGCAAACTGTGAA 1298 Query 1191 GAGTAGTGACACAGTTTCCAATGCCCCGAAGAAGAAAAGACAAACTTTTGTTTTCTCAGC 1250 ||||| ||||||||||| || | |||||||||||||||||||||||||||||||||||| Sbjct 1299 GAGTAATGACACAGTTTTAAACGTCCCGAAGAAGAAAAGACAAACTTTTGTTTTCTCAGC 1358 Query 1251 TACCATAGCGCTGTCTTCGGATTTCCGTAAAAAGCTAAAGCGTGGCTCCTCGAAGTCAAA 1310 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1359 CACCATAGCGCTGTCTTCGGATTTCCGTAAAAAGCTAAAGCGTGGCTCCTCAAAGTCAAA 1418 Query 1311 GCAATCATCATCTGGTGAAGTGAATTCTATTGAGGTTTTATCTGAACGAGCTGGAATGAG 1370 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1419 GCAATCATCATCTGGTGAAGTGAATTCTATTGAGGTTTTATCTGAACGAGCTGGAATGAG 1478 Query 1371 AGATAGTGTTGCCATCATTGATCTGACAACTGCATCTATTTTGGCACCAAAGATTGAAGA 1430 ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1479 AGATAATGTTGCCATCATTGATCTGACAACTACATCTATTTTGGCACCAAAGATTGAAGA 1538 Query 1431 ATCTTTTATTAAGTGCGAAGAGGAGGAAAAAGATGCTTACTTGTATTATATTTTGAGCGT 1490 |||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||| Sbjct 1539 ATCTTTTATTAAGTGCGAAGAGAAGGAAAAAGACGCATACTTGTATTATATTTTGAGCGT 1598 Query 1491 CCATGGACAAGGGCGGACAATTGTTTTCTGTACATCAGTGGCAGCTTTGCGGCATATCTG 1550 |||||||||||||||||||||||||||||| ||||||||| | | |||||||||||||| Sbjct 1599 CCATGGACAAGGGCGGACAATTGTTTTCTGCACATCAGTGACTGATTTGCGGCATATCTC 1658 Query 1551 TGCGCTTTTAAAGATTCTTGGACTCGATGTTTGCAAACTCTACTCAGATATGAAGCAGCG 1610 || ||||||||||||||||||||| |||||||||| ||||| |||||| ||||||||||| Sbjct 1659 TGGGCTTTTAAAGATTCTTGGACTTGATGTTTGCACACTCTTCTCAGAAATGAAGCAGCG 1718 Query 1611 AGCTCGGTTGAAGGCAATTGACCGTTTCCGTGCAAGCGAAAATAGCATACTCATAGCAAC 1670 ||||||||||||| |||| |||||||||||||| ||||||||| | |||||||||||||| Sbjct 1719 AGCTCGGTTGAAGTCAATCGACCGTTTCCGTGCGAGCGAAAATGGAATACTCATAGCAAC 1778 Query 1671 AGATGTTGCAGCAAGGGGTATTGATATTAAGAATGTCCGAACTATTATTCACTACCAACT 1730 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1779 AGATCTTGTAGCAAGGGGTATTGATATTAAGAATGTCCGAACTATTATTCACTACAAACT 1838 Query 1731 TCCACATTCGGCAGAAGTATATGTACATAGAAGTGGGAGGACTGCTAGAGCATTCGCAGA 1790 |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| Sbjct 1839 TCCACATTCGGCAGAAGTGTATGTACATAGATGTGGGAGGACTGCTAGAGCATTCGCAGA 1898 Query 1791 TGGATGCAGTATAGCTTTGATTGCGCCAAGTGATTCGTCCAAGTTTTACACGTTATGCAA 1850 ||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||| Sbjct 1899 TGGATGCAGTATAGCTTTGATTGAGCCAAATGAGACGTCCAAGTTTTACACGTTATGCAA 1958 Query 1851 GTCATTCTCTAAGGAAACCGTAAAGATATTCCCTTTGGATAGCTCTTATATGCCAGCTGT 1910 ||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct 1959 GTCATTCTCTATGGAAAGCGTAAAGATATTCCCTTTGGATAACTCTTATATGCCAGCTGT 2018 Query 1911 GAGGAAGCGATTATCTCTAGCACGTCAAATAGACCAGATTGAGCGGAAAGGCTCGCGGGA 1970 |||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||| Sbjct 2019 GAGGAAGCGATTATATCTAGCACGTCAAATATATGAGATTGAGCGGAAAGGCTCGCGGGA 2078 Query 1971 GAAAGCAGACAGGACCTGGCTTGAAAAGCATGCTGAATCGATGGAACTCGAATTGGACGA 2030 ||| |||||||||||||||||| |||| ||||||||||| |||||||||||||||||||| Sbjct 2079 GAATGCAGACAGGACCTGGCTTAAAAAACATGCTGAATCAATGGAACTCGAATTGGACGA 2138 Query 2031 TGACGAAAGTGAAGAGGAAAGAGTGGACAATGTCAGGCAGAGAAAAGCGACCTCAGCACA 2090 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2139 TGAAGAAAGTGAAGAGGAAAGAGTGGACAATGTCAGGCAGAGAAAAGCGACCTCAGCACG 2198 Query 2091 ACTTAATAAGCTGCAGGAGGAACTTAGCTCGCTCTTATCACGTCCGATGCAGCCCAAGAA 2150 ||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||| Sbjct 2199 ACTTAATAAGCTGAAGGAGGAACTTAGCACGCTCTTATCACATCCGATGCAGCCCAAGAA 2258 Query 2151 ATTTTCAGGCCGTTACTTTGCTGGGGCTGGTGTGTCGACTCTTATGCAGAATCAGTTTAC 2210 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 2259 ATTTTCAGGCCGTTACTTTGCTGGGGTTGGTGTGTCGACTCTTATGCAGAATCAGTTTGT 2318 Query 2211 AGAGTTAACgaaacaaaaacaa-ctacaaatgcaaactggtggaaagaaaaagagaagaa 2269 |||||||| ||| ||||||||| | ||||||||||| ||||||| | | ||||||||||| Sbjct 2319 AGAGTTAAAGAAGCAAAAACAAGC-ACAAATGCAAATTGGTGGAGATATAAAGAGAAGAA 2377 Query 2270 aacTTGTTGTCATTAACCAGAACTGCATCGAACCTCTTCAAGCCCTTCGTGCTGGTGGTA 2329 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2378 AACTTGTTGTCATTAACCAGAACTGCATCGAACCTCTTCAAGCCCTTCGTGCTGGTGGTA 2437 Query 2330 ACGAGATGATGAAAATGAAAGGTCAGAGTGCAGACAAGAGGCGCGATATAGCGAGCTTGA 2389 |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 2438 ACGAGATGCTGAAAATGAAAGGTCAGAGTGCAGAGAAGAGGCGCGATATAGCGAGCTTGA 2497 Query 2390 GGAAGAAAAGAAAGGAAGAGAAGATAG 2416 ||||||||||||||||||||||||| Sbjct 2498 AAAAGAAAAGAAAGGAAGAGAAGATAG 2524 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 123862182267 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5