BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg318486 Length=1065 Score E Sequences producing significant alignments: (Bits) Value AT3G17230.1 | Symbols: | invertase/pectin methylesterase inhib... 1395 0.0 AT3G17225.1 | Symbols: | Plant invertase/pectin methylesterase... 826 0.0 > AT3G17230.1 | Symbols: | invertase/pectin methylesterase inhibitor family protein | chr3:5886381-5889236 REVERSE LENGTH=1056 Length=1056 Score = 1395 bits (755), Expect = 0.0 Identities = 968/1067 (91%), Gaps = 29/1067 (3%) Strand=Plus/Plus Query 1 ATGGCTTATCCTTGCGTCAAAAGAAACGTATTTTCACTTCTTCCTCTACTCGTTCTTCTA 60 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1 ATGGCTTATCCTTGCGTCAAAAGAAACGTATTTTCACTTCTTCCTCTTCTCGTTCTTCTA 60 Query 61 TCAGTCACCCCTTTGTCTTCATCTTTGTCTCCGAGTGACAAAATCACAAAAGACTTACTT 120 ||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct 61 TCAATCACCCCTTTGTCTTCATCTTTATCTCCGAGTGACAAAATCACAAAAGATTTACTT 120 Query 121 TA-CTACCTCTGCAC-AGAACCAAACATTGA-CAGCAGCTTCTGCATCCCTTGGCTAACC 177 | | | |||||| | || || ||||||| || | |||||||||| ||||||||||| Sbjct 121 CAGC-AACTCTGCGCAAG-TCCGCACATTGACCA-CCCCTTCTGCATCACTTGGCTAACC 177 Query 178 TCTGATCCAACAACATTCACTCTCGACCTACAAGGTCTTCTCGATTTGGTCTTCCAAAAG 237 ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct 178 GCTGATCCTACAACATTCACCCTCGACCTACAAGGTCTTCTCGATTTAGTCTTCCAAAAG 237 Query 238 ACGCAATTGTTGGGCTATAAGAGCCTAGCGGCGATGAAAGGCTCAGTGAGAACCA-TGCC 296 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| | | Sbjct 238 ACGCAATTGTTGGGCTATAAGAGCCTAGCGGCGATGAAAGGCGCAGTGAGAACCACT-AC 296 Query 297 TGGTTCGACGCTCAAGATCC-CATTTGAGACTTGCGTGAAAGATTATGAATCAGCCATTA 355 || | ||||||||| || || ||| |||||||||||||| |||||||||| |||||||| Sbjct 297 TGATCCGACGCTCAGGA-CCTCATATGAGACTTGCGTGAGAGATTATGAAGGAGCCATTA 355 Query 356 AATCGATCGAGGAAGCTCAAGGGTTTCTGACCTCTAAGGCGTACGC-GTTAGCATCTCAA 414 || ||||||||||||||||||||| | ||||||||||||||||| | ||||||||||||| Sbjct 356 AAGCGATCGAGGAAGCTCAAGGGTCTGTGACCTCTAAGGCGTAC-CAGTTAGCATCTCAA 414 Query 415 GGGGCTGCTAAAGCCTTCATTAGTATATCAGTGTGTGAAGCTCAGTTTGAAGGACGGGCT 474 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct 415 GGGGCTGCTAAAGCCTTTGTTAGTATATCAGTGTGTGAAGCTCAGTTTGAAGGACGGGAT 474 Query 475 GATGTGCCGGCTTATGGTGCCAAGAA-AATGGCTTATCCTTGCGTCAAAAGAAACGTATT 533 |||||| | | ||||| || |||||||||||||||||||||||||||||||| Sbjct 475 GATGTG-C--C-------GCCAAAAACAATGGCTTATCCTTGCGTCAAAAGAAACGTATC 524 Query 534 TTCACTTCTTCCTCTACTCGTTCTTCTATCAGTCACCCCTTTGTCTTCATCTTTGTCTCC 593 ||||||||||||||| ||||||||||||||| |||| ||||| || |||||||||||||| Sbjct 525 TTCACTTCTTCCTCTTCTCGTTCTTCTATCAATCACTCCTTTTTCATCATCTTTGTCTCC 584 Query 594 GAGTGACAAAGTCACAAAAGGATTACTTTACCAACTCTGCACAAAACCGAACATTGACAG 653 |||||||||||||||||| | | |||| ||||||||||| ||||||| |||||| ||| Sbjct 585 GAGTGACAAAGTCACAAACGAAACACTTAACCAACTCTGCTCAAAACCAAACATTTACAA 644 Query 654 CTACTTCTGCATCCCTTGGCTAAACTCTGATCCAACAACATTCACCCTCGACCTACAAGG 713 | ||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||| Sbjct 645 CCACTTCTGCATCGCTTGGCTAACCTCTGATCCTACAACATTCACCCTCGACCTACAAGG 704 Query 714 TCTTCTCGATTTGGTCTTCCAAAAGACGCAATTGTTGGGCTATAAGAGCCTAGCGGCGAT 773 ||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct 705 TCTTCTCGATTCGGTTTTTCAAAAGACGCAATTGTTGGGCTATAAGAGCCTAGCGGCGAT 764 Query 774 GAAAGGCTCAGTGAGA-ACCACGACTGATCCGACGCTCAAGATCCCATTTGAGACTTGCG 832 |||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||| Sbjct 765 GAAAGGCTCAGTGA-ATACCACGACTGATCCGGCGCTCAAGATCCCATTTGAGACTTGCG 823 Query 833 TGAAAGATTATGAAGTAGCCATTAAAGCGATCGAGGAAGCTCAAGGGTTTGTGACCTCTA 892 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 824 TGACGGATTATGAAGTAGCCATTAAAGCGATCGAGGAAGCTCAAGGGTTTGTGACATCTA 883 Query 893 AGGCGTACC-CGTTAGCATCTCAAGGGGCTGCTAAAGCCTTCATTAGTATATCAGTGTGT 951 |||||||| | |||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct 884 AGGCGTACGAC-TTAGCATCTCTGGGGGCAGCTAAAGCCTTCATTAGTATATCAGTGTGT 942 Query 952 GAAGCTCAGTTTGAAGGACGGGTTAATGTGCCGGATTATGTAGCGAAACTCAAT-TCATT 1010 ||| |||||||||||||||||| ||||||||| | ||||||| ||||||||||| | || Sbjct 943 GAAACTCAGTTTGAAGGACGGGATAATGTGCCAGTTTATGTAACGAAACTCAATATG-TT 1001 Query 1011 TTTTAAAAGAATGTGTAACATTGATAGGGTTTTCTCCGACGTTTTGA 1057 |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1002 TTTTAAGAGAATGTGTAACATTGATAGGGTTTTCTCCGACGTTTTGA 1048 Score = 699 bits (378), Expect = 0.0 Identities = 451/486 (93%), Gaps = 6/486 (1%) Strand=Plus/Plus Query 502 ATGGCTTATCCTTGCGTCAAAAGAAACGTATTTTCACTTCTTCCTCTACTCGTTCTTCTA 561 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1 ATGGCTTATCCTTGCGTCAAAAGAAACGTATTTTCACTTCTTCCTCTTCTCGTTCTTCTA 60 Query 562 TCAGTCACCCCTTTGTCTTCATCTTTGTCTCCGAGTGACAAAGTCACAAAAGGATT-ACT 620 ||| |||||||||||||||||||||| ||||||||||||||| ||||||||| ||| ||| Sbjct 61 TCAATCACCCCTTTGTCTTCATCTTTATCTCCGAGTGACAAAATCACAAAAG-ATTTACT 119 Query 621 TTACCAACTCTGCACAAAACCGAACATTGAC-AGCTACTTCTGCATCCCTTGGCTAAACT 679 | | ||||||||| ||| ||| |||||||| | | |||||||||| ||||||||| | Sbjct 120 TCAGCAACTCTGCGCAAGTCCGCACATTGACCACCC-CTTCTGCATCACTTGGCTAACCG 178 Query 680 CTGATCCAACAACATTCACCCTCGACCTACAAGGTCTTCTCGATTTGGTCTTCCAAAAGA 739 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 179 CTGATCCTACAACATTCACCCTCGACCTACAAGGTCTTCTCGATTTAGTCTTCCAAAAGA 238 Query 740 CGCAATTGTTGGGCTATAAGAGCCTAGCGGCGATGAAAGGCTCAGTGAGAACCACGACTG 799 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| Sbjct 239 CGCAATTGTTGGGCTATAAGAGCCTAGCGGCGATGAAAGGCGCAGTGAGAACCACTACTG 298 Query 800 ATCCGACGCTCAAGATCC-CATTTGAGACTTGCGTGAAAGATTATGAAGTAGCCATTAAA 858 |||||||||||| || || ||| |||||||||||||| ||||||||||| |||||||||| Sbjct 299 ATCCGACGCTCAGGA-CCTCATATGAGACTTGCGTGAGAGATTATGAAGGAGCCATTAAA 357 Query 859 GCGATCGAGGAAGCTCAAGGGTTTGTGACCTCTAAGGCGTACCCGTTAGCATCTCAAGGG 918 |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct 358 GCGATCGAGGAAGCTCAAGGGTCTGTGACCTCTAAGGCGTACCAGTTAGCATCTCAAGGG 417 Query 919 GCTGCTAAAGCCTTCATTAGTATATCAGTGTGTGAAGCTCAGTTTGAAGGACGGGTTAAT 978 |||||||||||||| ||||||||||||||||||||||||||||||||||||||| | || Sbjct 418 GCTGCTAAAGCCTTTGTTAGTATATCAGTGTGTGAAGCTCAGTTTGAAGGACGGGATGAT 477 Query 979 GTGCCG 984 |||||| Sbjct 478 GTGCCG 483 Score = 628 bits (340), Expect = 2e-179 Identities = 444/494 (90%), Gaps = 8/494 (2%) Strand=Plus/Plus Query 1 ATGGCTTATCCTTGCGTCAAAAGAAACGTATTTTCACTTCTTCCTCTACTCGTTCTTCTA 60 ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| Sbjct 493 ATGGCTTATCCTTGCGTCAAAAGAAACGTATCTTCACTTCTTCCTCTTCTCGTTCTTCTA 552 Query 61 TCAGTCACCCCTTTGTCTTCATCTTTGTCTCCGAGTGACAAAATCACAAAAGACTTACTT 120 ||| |||| ||||| || |||||||||||||||||||||||| ||||||| || |||| Sbjct 553 TCAATCACTCCTTTTTCATCATCTTTGTCTCCGAGTGACAAAGTCACAAACGAAACACTT 612 Query 121 TACTACCTCTGCACAGAACCAAACATTGAC-AGCAGCTTCTGCATCCCTTGGCTAACCTC 179 || | |||||| || ||||||||||| || | || |||||||||| ||||||||||||| Sbjct 613 AACCAACTCTGCTCAAAACCAAACATTTACAACCA-CTTCTGCATCGCTTGGCTAACCTC 671 Query 180 TGATCCAACAACATTCACTCTCGACCTACAAGGTCTTCTCGATTTGGTCTTCCAAAAGAC 239 |||||| ||||||||||| ||||||||||||||||||||||||| ||| || |||||||| Sbjct 672 TGATCCTACAACATTCACCCTCGACCTACAAGGTCTTCTCGATTCGGTTTTTCAAAAGAC 731 Query 240 GCAATTGTTGGGCTATAAGAGCCTAGCGGCGATGAAAGGCTCAGTGAGA-ACCATGCCTG 298 ||||||||||||||||||||||||||||||||||||||||||||||| | |||| | ||| Sbjct 732 GCAATTGTTGGGCTATAAGAGCCTAGCGGCGATGAAAGGCTCAGTGA-ATACCACGACTG 790 Query 299 GTTCGACGCTCAAGATCCCATTTGAGACTTGCGTGAAAGATTATGAA-TCAGCCATTAAA 357 | || |||||||||||||||||||||||||||||| ||||||||| | |||||||||| Sbjct 791 ATCCGGCGCTCAAGATCCCATTTGAGACTTGCGTGACGGATTATGAAGT-AGCCATTAAA 849 Query 358 TCGATCGAGGAAGCTCAAGGGTTTCTGACCTCTAAGGCGTACG-CGTTAGCATCTCAAGG 416 ||||||||||||||||||||||| |||| ||||||||||||| | |||||||||| || Sbjct 850 GCGATCGAGGAAGCTCAAGGGTTTGTGACATCTAAGGCGTACGAC-TTAGCATCTCTGGG 908 Query 417 GGCTGCTAAAGCCTTCATTAGTATATCAGTGTGTGAAGCTCAGTTTGAAGGACGGGCTGA 476 ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| | | Sbjct 909 GGCAGCTAAAGCCTTCATTAGTATATCAGTGTGTGAAACTCAGTTTGAAGGACGGGATAA 968 Query 477 TGTGCCGGCTTATG 490 |||||| | ||||| Sbjct 969 TGTGCCAGTTTATG 982 > AT3G17225.1 | Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily protein | chr3:5884374-5884931 REVERSE LENGTH=558 Length=558 Score = 826 bits (447), Expect = 0.0 Identities = 529/567 (93%), Gaps = 12/567 (2%) Strand=Plus/Plus Query 502 ATGGCTTATCCTTGCGTCAAAAGAAACGTATTTTCACTTCTTCCTCTACTCGTTCTTCTA 561 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1 ATGGCTTATCCTTGCGTCAAAAGAAACGTATTTTCACTTCTTCCTCTACTCCTTCTTCTA 60 Query 562 TCAGTCACCCCTTTGTCTTCATCTTTGTCTCCGAGTGACAAAGTCACAAAAGGATTACTT 621 ||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct 61 TCAATCACCCCTTTGTCTTCATCTTTGTCTCCGAGTGACAAAGTCACAAAAACCTT-CTT 119 Query 622 -TACCAACTCTGCACAAAACCGAACATTGACAGCTACTTCTGCATCCCTTGGCTAAACTC 680 | || |||||||||| ||||| ||||||||| | ||||||||||| ||||||||| ||| Sbjct 120 ATCCCGACTCTGCACAGAACCGCACATTGACACCAACTTCTGCATCACTTGGCTAATCTC 179 Query 681 TGATCCAACAACAT-TCACCCTCGACCTACAAGGTCTTCTCGATTTGGTCTTCCAAAAGA 739 |||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||| Sbjct 180 TGATCCAACAACATAT-ACCCTCGACCTACAAGGTCTTCTCGATTTAGTCTTCCAAAAGA 238 Query 740 CGCAATTGTTGGGCTATAAGAGCCTAGCGGCGATGAAAGGCTCAGTGAGA-ACCACGACT 798 ||||||| |||||| |||||| |||||||||||||||||||||||||| | ||||||||| Sbjct 239 CGCAATTATTGGGCAATAAGAACCTAGCGGCGATGAAAGGCTCAGTGA-ATACCACGACT 297 Query 799 GATCCGACGCTCAAGATCCCATTTGAGACTTGCGTGAAAGATTATGAAGTAGCCATTAAA 858 ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct 298 GATCCGACGCTCAAGATCCCATTTGAGACTTGCGTGAGAGATTATGAAGGAGCCATTAAA 357 Query 859 GCGATCGAGGAAGCTCAAGGGTTTGTGACCTCTAAGGCGTACCCGTTAGCATCTCAAGGG 918 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 358 GCGATCGAGGAAGCTCAAGGGTTTGTGACCTCTAAGGCGTACCCGTTAGCATCTCAAGGG 417 Query 919 GCTGCTAAAGCCTTCATTAGTATATCAGTGTGTGAAGCTCAGTTTGAAGGACGGGTTAAT 978 |||||||||||||||||||||||||||||||||||||||||||||| |||| ||| Sbjct 418 GCTGCTAAAGCCTTCATTAGTATATCAGTGTGTGAAGCTCAGTTTGCAGGA------AAT 471 Query 979 GTGCCGGATTATGTAGCGAAACTCAATTCATTTTTTAAAAGAATGTGTAACATTGATAGG 1038 ||||||| ||||||||| |||||||||| |||||||| ||||||||||| ||||||||| Sbjct 472 GTGCCGGCTTATGTAGCAAAACTCAATTTGTTTTTTAAGAGAATGTGTAATATTGATAGG 531 Query 1039 GTTTTCTCCGACGTTTTGACTTCTTGA 1065 ||||||||||||||||||||||||||| Sbjct 532 GTTTTCTCCGACGTTTTGACTTCTTGA 558 Score = 660 bits (357), Expect = 0.0 Identities = 436/473 (92%), Gaps = 10/473 (2%) Strand=Plus/Plus Query 1 ATGGCTTATCCTTGCGTCAAAAGAAACGTATTTTCACTTCTTCCTCTACTCGTTCTTCTA 60 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1 ATGGCTTATCCTTGCGTCAAAAGAAACGTATTTTCACTTCTTCCTCTACTCCTTCTTCTA 60 Query 61 TCAGTCACCCCTTTGTCTTCATCTTTGTCTCCGAGTGACAAAATCACAAAAGA-CTTACT 119 ||| |||||||||||||||||||||||||||||||||||||| |||||||| | ||| || Sbjct 61 TCAATCACCCCTTTGTCTTCATCTTTGTCTCCGAGTGACAAAGTCACAAAA-ACCTT-CT 118 Query 120 T-T-ACTACCTCTGCACAGAACCAAACATTGACAGCAGCTTCTGCATCCCTTGGCTAACC 177 | | | | |||||||||||||| ||||||||| || |||||||||| ||||||||| | Sbjct 119 TATCCCGA-CTCTGCACAGAACCGCACATTGACACCAACTTCTGCATCACTTGGCTAATC 177 Query 178 TCTGATCCAACAACAT-TCACTCTCGACCTACAAGGTCTTCTCGATTTGGTCTTCCAAAA 236 |||||||||||||||| | || |||||||||||||||||||||||||| ||||||||||| Sbjct 178 TCTGATCCAACAACATAT-ACCCTCGACCTACAAGGTCTTCTCGATTTAGTCTTCCAAAA 236 Query 237 GACGCAATTGTTGGGCTATAAGAGCCTAGCGGCGATGAAAGGCTCAGTGAGA-ACCATGC 295 ||||||||| |||||| |||||| |||||||||||||||||||||||||| | |||| | Sbjct 237 GACGCAATTATTGGGCAATAAGAACCTAGCGGCGATGAAAGGCTCAGTGA-ATACCACGA 295 Query 296 CTGGTTCGACGCTCAAGATCCCATTTGAGACTTGCGTGAAAGATTATGAATCAGCCATTA 355 ||| | ||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct 296 CTGATCCGACGCTCAAGATCCCATTTGAGACTTGCGTGAGAGATTATGAAGGAGCCATTA 355 Query 356 AATCGATCGAGGAAGCTCAAGGGTTTCTGACCTCTAAGGCGTACGCGTTAGCATCTCAAG 415 || ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct 356 AAGCGATCGAGGAAGCTCAAGGGTTTGTGACCTCTAAGGCGTACCCGTTAGCATCTCAAG 415 Query 416 GGGCTGCTAAAGCCTTCATTAGTATATCAGTGTGTGAAGCTCAGTTTGAAGGA 468 |||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 416 GGGCTGCTAAAGCCTTCATTAGTATATCAGTGTGTGAAGCTCAGTTTGCAGGA 468 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 52158366255 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5