BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg318596
Length=1119
Score E
Sequences producing significant alignments: (Bits) Value
AT3G44120.1 | Symbols: | F-box and associated interaction doma... 1327 0.0
AT2G07140.1 | Symbols: | F-box and associated interaction doma... 1286 0.0
AT3G18320.1 | Symbols: | F-box and associated interaction doma... 656 0.0
AT3G18910.1 | Symbols: ETP2 | EIN2 targeting protein2 | chr3:65... 401 6e-111
AT3G22350.1 | Symbols: | F-box and associated interaction doma... 102 7e-21
> AT3G44120.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:15878399-15879817 REVERSE LENGTH=1419
Length=1419
Score = 1327 bits (718), Expect = 0.0
Identities = 1015/1152 (88%), Gaps = 46/1152 (4%)
Strand=Plus/Plus
Query 1 ATGACGTTACCGGAGCTTCCAAAGGATTTGGTAGAGGAGATACTCTGTCGCGTTCCGGCC 60
||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||
Sbjct 55 ATGACGTTACCGGAGCTTCCAAAGGATTTAGTAGAAGAGATACTCTGTTTTGTTCCGGCC 114
Query 61 ACATCTCTGAAACGATTACGATCCACTTGCAAAAG-ATGGAACCATTTATTCAAAGATGA 119
||||||||||| ||||||||||||| |||| |||| |||||| | |||||||||||||||
Sbjct 115 ACATCTCTGAAGCGATTACGATCCAGTTGC-AAAGAATGGAATCGTTTATTCAAAGATGA 173
Query 120 TAAGAGATTCGCAAGAAAGCACACTGACAAAGCCGCAAAGCAGTATCTACCTCTCATGTT 179
|||||||||||||||||||||| ||| |||||||||||||||| || |||||||| |||
Sbjct 174 CAAGAGATTCGCAAGAAAGCACATTGAAAAAGCCGCAAAGCAGTTTCAACCTCTCACGTT 233
Query 180 GACCAAGGACTACAGGATTTGTCCTATAAACG------T-C----AA-TACTCCATCTCT 227
||| ||| |||||||||||||||||||||||| | | || ||||||||||||
Sbjct 234 GACGAAGAACTACAGGATTTGTCCTATAAACGTCAATCTCCATGGAACTACTCCATCTCT 293
Query 228 AGAGGTTAAAAATGAGCTTAGCTTACTCGA---TC-CTC-----ATTCAGCAGCTCAATT 278
|||||||||||||||| | |||||| |||| || ||| ||||||||||||| ||
Sbjct 294 AGAGGTTAAAAATGAGGTCAGCTTAGTCGATCCTCACTCTAAGAATTCAGCAGCTCAGTT 353
Query 279 CAACATAGATCGAGTCTTTCACTGTGATGGCTTGTTGTTATGCACATCCCAAAAAGAATC 338
||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 354 CAATATAGATCGAGTCTTTCACTGTGATGGCTTGTTGTTATGCACCTCCCAAAAAGATTC 413
Query 339 AAGATTCGTGGTTTGGAACCCTTTAACTGGTGTAACCAAGTGGATCGAACTCGGCGATCG 398
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 414 AAGATTCGTCGTTTGGAACCCTTTAACTGGTGTAACCAAGTGGATCGAACTCGGTGATCG 473
Query 399 TTACAACGAAGGTATGGCTTTTGTTCTTGGATATGACAACAAGTCCTGTAATAAGAGCTA 458
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 474 TTACAACGAAGGTATGGCTTTTATTCTTGGATATGACAACAAGTCCTGTAATAAGAGCTA 533
Query 459 CAAAATCTTGAGCTTTAATTTTTGTA-ACAAGGATTCTGAAATCTACGAGTTTAGCTCTG 517
|||| | |||||||||||| || || |||||||||||||||||||||||||||||||||
Sbjct 534 CAAAGCCATGAGCTTTAATTATT-TAGACAAGGATTCTGAAATCTACGAGTTTAGCTCTG 592
Query 518 ACTCATGGAGGGTTATTGATGATAT---CAAGCCACGCCACTACTTGGAATACTCTAGAA 574
||||||||||||||||||||||||| |||||||| ||||||| |||| |||| ||||
Sbjct 593 ACTCATGGAGGGTTATTGATGATATTATCAAGCCACCCCACTACATGGACTACTTTAGAG 652
Query 575 AGTGTGTGTCTTTGAAGGGAAACACTTACTGGTTTGGTATAGATAGAAGACGAAGTCTAT 634
||||| | |||||||||||||||||||||||||| |||||||||||||||||||| | |
Sbjct 653 AGTGTTTCTCTTTGAAGGGAAACACTTACTGGTTGGGTATAGATAGAAGACGAAGGCCAC 712
Query 635 GGGACCCTAGCATGGCCTTGCTCAAATTTGATTTTGGAACAGAGAAATTTGGGTATGTTC 694
||||| | |||| ||||| |||||||||||||||||||||||| |||||| ||||||
Sbjct 713 CGGACCTTCGCATAACCTTGATCAAATTTGATTTTGGAACAGAGAGATTTGGTTATGTTT 772
Query 695 CTCTGCCTCGTCCATGTCAAGTGCATGGTTTTGAGGCTTCTAATCTTTCCGTTGTCAGAG 754
||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 773 CTCTGCCTCCCCCCTGTCAAGTGCATGGTTTTGAGGCTTCTAATCTTTCCGTTGTCGGAG 832
Query 755 ACGAAAAGCTTTCGGTGTTATTAGAGGACGGTTCTACATCCAAGACTGAGGTATGGGTGA 814
|||| ||||||||||||||| || ||| ||||||||||||||||||||||||||||||||
Sbjct 833 ACGAGAAGCTTTCGGTGTTAGTACAGGGCGGTTCTACATCCAAGACTGAGGTATGGGTGA 892
Query 815 CAAATAAGATTGGTGAGAACAATGTGGTGTCGTGGAGCAAGGTCTTAGCATTGTATCCGA 874
||| ||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||
Sbjct 893 CAAGTAAGATTGGTGAGGCCAATGTGGTGTCGTGGAGCAAGGTGTTATCATTGTATCCGA 952
Query 875 GAGC-TGA--TT--TTT--GGCATGGCGC-AAGTTGCTTGCTAGACGAGGAGAAGAAAGT 926
||| ||| || ||| |||||||| | ||||| ||||||||||||||||||||||||
Sbjct 953 -AGCCTGACGTTGGTTTTTGGCATGGC-CTAAGTTTCTTGCTAGACGAGGAGAAGAAAGT 1010
Query 927 CGTCCTGTGTTGTAAGAGTAAGAGATGGATGGAGGAAGGAGAC-A--AG---GTATACAT 980
|||| ||||||||||||||||| ||||||||||||||| |||| | || || ||||
Sbjct 1011 CGTCTTGTGTTGTAAGAGTAAGGGATGGATGGAGGAAGAAGACGAGGAGAATGTTTACAG 1070
Query 981 TGTTGGAGAGGATAATAAAGTCAAAATAATGGATTCTGGAGTTTATACAATTGAAGGATC 1040
|||||| ||||||| |||| ||| | || || ||| ||||||| | ||||||| |||||
Sbjct 1071 TGTTGGGGAGGATACTAAATTCATACTACTGAATTTTGGAGTTCAGACAATTGGAGGATA 1130
Query 1041 TT-GTCCAACTATTCTTAATTATATTCCAAGTTTGGTTCAAATCGAGAGAGCTGGAGGCA 1099
|| | |||| |||| |||||||| |||||||||||| ||| |||||| ||||||| |||
Sbjct 1131 TTCG-CCAATTATTGTTAATTATGTTCCAAGTTTGGGTCAGATCGAGCTAGCTGGAAGCA 1189
Query 1100 AAAGAAAAAGAG 1111
|||| |||||||
Sbjct 1190 AAAGGAAAAGAG 1201
> AT2G07140.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr2:2957561-2959851 FORWARD LENGTH=1329
Length=1329
Score = 1286 bits (696), Expect = 0.0
Identities = 984/1116 (88%), Gaps = 48/1116 (4%)
Strand=Plus/Plus
Query 1 ATGACGTTACCGGAGCTTCCAAAGGATTTGGTAGAGGAGATACTCTGTCGCGTTCCGGCC 60
||||||||||||||||||||||||||||| ||||| ||||||||| || |||||||||
Sbjct 1 ATGACGTTACCGGAGCTTCCAAAGGATTTAGTAGAAGAGATACTCAGTTTTGTTCCGGCC 60
Query 61 ACATCTCTGAAACGATTACGATCCACTTGCAAAAGATGGAACCATTTATTCAAAGATGAT 120
||||||||||| ||||||||||||||||||||| ||||||| | |||||||||||||||
Sbjct 61 ACATCTCTGAAGCGATTACGATCCACTTGCAAAGGATGGAATCGTTTATTCAAAGATGAC 120
Query 121 AAGAGATTCGCAAGAA-AGCACACTGACAAAGCCGCAAAGCAGTATCTACCTCTCATGTT 179
||||||||| |||||| | |||||||| |||||||||||||||| || |||||||| |||
Sbjct 121 AAGAGATTCACAAGAATA-CACACTGAAAAAGCCGCAAAGCAGTTTCAACCTCTCACGTT 179
Query 180 GACCAAGGACTACAGGATTTGTCCTATAAACG------T-C----AA-TACTCCATCTCT 227
||| ||| |||||||||||||||||||||||| | | || ||||||||||||
Sbjct 180 GACGAAGAACTACAGGATTTGTCCTATAAACGTCAATCTCCATGGAACTACTCCATCTCT 239
Query 228 AGAGGTTAAAAATGAGCTTAGCTTACTCGA---TC-CTC-----ATTCAGCAGCTCAATT 278
|||||||||||||||| | ||||||||||| || ||| ||||||||||||| ||
Sbjct 240 AGAGGTTAAAAATGAGGTCAGCTTACTCGATCCTCACTCTAAGAATTCAGCAGCTCAGTT 299
Query 279 CAACATAGATCGAGTCTTTCACTGTGATGGCTTGTTGTTATGCACATCCCAAAAAGAATC 338
||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 300 CAATATAGATCGAGTCTTTCACTGTGATGGCTTGTTGTTATGCACCTCCCAAAAAGATTC 359
Query 339 AAGATTCGTGGTTTGGAACCCTTTAACTGGTGTAACCAAGTGGATCGAACTCGGCGATCG 398
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 360 AAGATTCGTCGTTTGGAACCCTTTAACTGGTGTAACCAAGTGGATCGAACTCGGCGATCG 419
Query 399 TTACAACGAAGGTATGGCTTTTGTTCTTGGATATGACAACAAGTCCTGTAATAAGAGCTA 458
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 420 TTACAACGAAGGTATGGCTTTTATTCTTGGATATGACAACAAGTCCTGTAATAAGAGCTA 479
Query 459 CAAAATCTTGAGCTTTAATTTTTGTA-ACAAGGATTCTGAAATCTACGAGTTTAGCTCTG 517
|||| | |||||||||||| || || |||||||||||||||||||||||||||||||||
Sbjct 480 CAAAGCCATGAGCTTTAATTATT-TAGACAAGGATTCTGAAATCTACGAGTTTAGCTCTG 538
Query 518 ACTCATGGAGGGTTATTGATGATAT---CAAGCCACGCCACTACTTGGAATACTCTAGAA 574
||||||||||||||||||||||||| |||||||| ||||||| |||| |||| ||||
Sbjct 539 ACTCATGGAGGGTTATTGATGATATTATCAAGCCACCCCACTACATGGACTACTTTAGAG 598
Query 575 AGTGTGTGTCTTTGAAGGGAAACACTTACTGGTTTGGTATAGATAGAAGACGAAGTCTAT 634
||||| | |||||||||||||||||||||||||| |||||||||||||||||||| | |
Sbjct 599 AGTGTTTCTCTTTGAAGGGAAACACTTACTGGTTGGGTATAGATAGAAGACGAAGGCCAC 658
Query 635 GGGACCCTAGCATGGCCTTGCTCAAATTTGATTTTGGAACAGAGAAATTTGGGTATGTTC 694
||||| | |||| ||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct 659 CGGACCTTCGCATAACCTTGATCAAATTTGATTTTGGAACAGAGAAATTTGGTTATGTTT 718
Query 695 CTCTGCCTCGTCCATGTCAAGTGCATGGTTTTGAGGCTTCTAATCTTTCCGTTGTCAGAG 754
||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 719 CTCTGCCTCCCCCCTGTCAAGTGCATGGTTTTGAGGCTTCTAATCTTTCCGTTGTCGGAG 778
Query 755 ACGAAAAGCTTTCGGTGTTATTAGAGGACGGTTCTACATCCAAGACTGAGGTATGGGTGA 814
|||| ||||||||||||||| || ||| ||||||||||||||||||||||||||||||||
Sbjct 779 ACGAGAAGCTTTCGGTGTTAGTACAGGCCGGTTCTACATCCAAGACTGAGGTATGGGTGA 838
Query 815 CAAATAAGATTGGTGAGAACAATGTGGTGTCGTGGAGCAAGGTCTTAGCATTGTATCCGA 874
||| ||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||
Sbjct 839 CAAGTAAGATTGGTGAGGCCAATGTGGTGTCGTGGAGCAAGGTGTTATCATTGTATCCGA 898
Query 875 GAGC-TGA--TT--TTT--GGCATGGCGC-AAGTTGCTTGCTAGACGAGGAGAAGAAAGT 926
||| ||| || ||| |||||||| | ||||| ||||||||||||||||||||||||
Sbjct 899 -AGCCTGACGTTGGTTTTTGGCATGGC-CTAAGTTTCTTGCTAGACGAGGAGAAGAAAGT 956
Query 927 CGTCCTGTGTTGTAAGAGTAAGAGATGGATGGAGGAAG--GA-GA---CAAGGTATACAT 980
| || ||||||||||||||||| ||||||||||||||| || || ||| || |||||
Sbjct 957 CTTCTTGTGTTGTAAGAGTAAGGGATGGATGGAGGAAGAAGACGAGGACAATGTTTACAT 1016
Query 981 TGTTGGAGAGGATAATAAAGTCAAAATAATGGATTCTGGAGTTTATACAATTGAAGGATC 1040
|||||| |||||||||||| ||| | || || ||| ||||||| | ||||||| ||||
Sbjct 1017 TGTTGGGGAGGATAATAAATTCATACTACTGAATTTTGGAGTTGAGACAATTGGAGGAGA 1076
Query 1041 TT-GTCCAACTATT-CTTAATTATATTCCAAGTTTG 1074
| | |||| |||| || | |||| |||||||||||
Sbjct 1077 ATCG-CCAATTATTACT-ACTTATGTTCCAAGTTTG 1110
> AT3G18320.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:6289227-6290383 REVERSE LENGTH=900
Length=900
Score = 656 bits (355), Expect = 0.0
Identities = 550/642 (86%), Gaps = 21/642 (3%)
Strand=Plus/Plus
Query 488 AGGATTCTGAAATCTACGAGTTTAGCTCTGACTCATGGAGGGTTATTGATGATAT---CA 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 254 AGGATTCTGAAATCTACGAGTTTAGCTCTGACTCATGGAGGGTTATTGATGATATTATCA 313
Query 545 AGCCACGCCACTACTTGGAATACTCTAGAAAGTGTGTGTCTTTGAAGGGAAACACTTACT 604
|||||| ||||||| |||| |||| |||||| ||| ||||||||||||||||||||||||
Sbjct 314 AGCCACCCCACTACATGGAGTACTTTAGAAAATGTTTGTCTTTGAAGGGAAACACTTACT 373
Query 605 GGTTTGGTATAGATAGAAGACGAAGTCTATGGGACCCTAGCATGGCCTTGCTCAAATTTG 664
|||| |||||||||||||||||||| | | ||||| | |||| ||||| |||||||||
Sbjct 374 GGTTGGGTATAGATAGAAGACGAAGGCCACCGGACCTTCGCATAACCTTGATCAAATTTG 433
Query 665 ATTTTGGAACAGAGAAATTTGGGTATGTTCCTCTGCCTCGTCCATGTCAAGTGCATGGTT 724
|||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||
Sbjct 434 ATTTTGGAACAGAGAAATTTGGTTATGTTCCTCTGCCTCCCCCCTGTCAAGTGCATGGTT 493
Query 725 TTGAGGCTTCTAATCTTTCCGTTGTCAGAGACGAAAAGCTTTCGGTGTTATTAGAGG-AC 783
|||||||||||| ||||||| ||| ||||||| |||||||| ||||| ||| || |
Sbjct 494 TTGAGGCTTCTAGGCTTTCCGCTGTGGGAGACGAGAAGCTTTCACTGTTACTAGTGGGA- 552
Query 784 GGTTCTACATCCAAGACTGAGGTATGGGTGACAAATAAGATTGGTGAGAACAATGTGGTG 843
| ||||||||| || |||||| |||||||||||| ||||||||||||| ||||||||||
Sbjct 553 GATTCTACATCAAATACTGAGTTATGGGTGACAAGTAAGATTGGTGAGGCCAATGTGGTG 612
Query 844 TCGTGGAGCAAGGTCTTAGCATTGTATCCGA-G---AGC-T-GATTTTTGGCATGGCGC- 896
|||||||||||||| ||| |||||||||| | | | | | | ||||||||||||| |
Sbjct 613 TCGTGGAGCAAGGTGTTATCATTGTATCCAAAGCCTAACGTTGGTTTTTGGCATGGC-CT 671
Query 897 AAGTTGCTTGCTAGACGAGGAGAAGAAAGTCGTCCTGTGTTGTAAGAGTAAGAGATGGAT 956
||||| ||||||||||||||||||||||||| | ||||||||||||||||| |||||||
Sbjct 672 AAGTTTCTTGCTAGACGAGGAGAAGAAAGTCTTGTTGTGTTGTAAGAGTAAGGGATGGAT 731
Query 957 GGAGGAAGGAGAC-AAG-----GTATACATTGTTGGAGAGGATAATAAAGTCAAAATAAT 1010
| |||||| |||| ||| || ||||||||||| ||||||| |||| ||| | || |
Sbjct 732 GAAGGAAGAAGACGAAGACAATGTTTACATTGTTGGGGAGGATACTAAATTCATACTACT 791
Query 1011 GGATTCTGGAGTTTATACAATTGAAGGATCTT-GTCCAACTATTCTTAATTATATTCCAA 1069
| ||| ||||||| | ||||||| ||||| || | |||| |||| |||||||| ||||||
Sbjct 792 GAATTTTGGAGTTCAGACAATTGGAGGATATTCG-CCAATTATTGTTAATTATGTTCCAA 850
Query 1070 GTTTGGTTCAAATCGAGAGAGCTGGAGGCAAAAGAAAAAGAG 1111
|||||| ||| |||||| ||||||| ||||||| |||||||
Sbjct 851 GTTTGGGTCAGATCGAGCTAGCTGGAAGCAAAAGGAAAAGAG 892
Score = 311 bits (168), Expect = 1e-83
Identities = 205/223 (92%), Gaps = 1/223 (0%)
Strand=Plus/Plus
Query 1 ATGACGTTACCGGAGCTTCCAAAGGATTTGGTAGAGGAGATACTCTGTCGCGTTCCGGCC 60
|||||||| |||||||||||||||||||| ||||| |||||||||||| |||||||||
Sbjct 1 ATGACGTTGCCGGAGCTTCCAAAGGATTTAGTAGAAGAGATACTCTGTTTTGTTCCGGCC 60
Query 61 ACATCTCTGAAACGATTACGATCCACTTGCAAAAGATGGAACCATTTATTCAAAGATGAT 120
||||||||||| ||||||||||||||||||||| ||||||| | |||||||||||||||
Sbjct 61 ACATCTCTGAAGCGATTACGATCCACTTGCAAAGGATGGAATCGTTTATTCAAAGATGAC 120
Query 121 AAGAGATTCGCAAGAAAGCACACTGACAAAGCCGCAAAGCAGTATCTACCTCTCATGTTG 180
|||||||||||||||||||||| ||| |||||||||||||||| || |||||||| ||||
Sbjct 121 AAGAGATTCGCAAGAAAGCACATTGAAAAAGCCGCAAAGCAGTTTCAACCTCTCACGTTG 180
Query 181 ACCAAGGACTACAGGATTTGTCCTATAAACGTCAATACTCCAT 223
|||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 181 ACCAAGAACTACAGGATTTGTCCTATAAACGTCAAT-CTCCAT 222
> AT3G18910.1 | Symbols: ETP2 | EIN2 targeting protein2 | chr3:6521719-6523043
FORWARD LENGTH=1325
Length=1325
Score = 401 bits (217), Expect = 6e-111
Identities = 880/1181 (75%), Gaps = 122/1181 (10%)
Strand=Plus/Plus
Query 14 AGCTTCCAAAGGATTTGGTAGAGGAGATACTCTGTCGCGTTCCGGCCACATCTCTGAAAC 73
|||||||||| || |||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct 61 AGCTTCCAAATGACTTGGTAGAGGAGATACTCTGTCGCGTTCCGGCAACATCTCTGAGAC 120
Query 74 GATTACGATCCACTTGCAAAAG-ATGGAACCATTTATTCAAAGATGATAAGAGATTCGCA 132
| |||||||| ||||||||| | |||||||| ||||||||||| |||| || ||| |||
Sbjct 121 GTTTACGATCGACTTGCAAA-GCATGGAACCGTTTATTCAAAGGTGATCGGATATTAGCA 179
Query 133 AGAAAGCACACTGACAAAGCCGCAAAGCAGTATCTACCTCTCAT-GTTGACCAAGGACTA 191
|| ||||| ||| ||| ||||||| |||| | | |||| || ||| | || || ||
Sbjct 180 AGTAAGCATTTTGAAAAATCCGCAAAACAGTTTAGATCTCT-ATCGTTAAGGAATGATTA 238
Query 192 CAGGATTTGTCCTAT-A-----AA-CGTC-A---A--TACTCCATCTCTAGAGGTTAAAA 238
|||||||| ||| || | || | || | | || ||||||||||||| ||||||
Sbjct 239 CAGGATTTTTCCGATTAGCTTCAATC-TCCATGGAAATAGTCCATCTCTAGAGCTTAAAA 297
Query 239 ATGAGCTTAGCT-TACTCGATCCTCA---TTCAGCAGCTCAATTC-AACATAGATCGAGT 293
|||||| | | | ||| || || | |||||| |||| |||| || ||| ||||||
Sbjct 298 GTGAGCTAATCGATCCTC-ATTCTAAGAATTCAGCTGCTCCATTCGAA-ATATCTCGAGT 355
Query 294 CTTTCACTGTGATGGCTTGTTGTTATGCACATCCCAAAA--A-GAATCAAGATTCGTGGT 350
| |||||||||| || |||||||| ||| | |||||| | ||||| ||| |||||||
Sbjct 356 CATTCACTGTGAGGGATTGTTGTTGTGCTCCTCCCAATTGGACGAATCTAGAGTCGTGGT 415
Query 351 TTGGAACCCTTTAACTGGTGTAACCAAGTGGATC-GAACTCGGCGATCGTTA-C-AACGA 407
|||||| |||||||| |||| ||||| ||||||| |||| ||||||| || | || |
Sbjct 416 TTGGAATCCTTTAACCGGTGAAACCAGGTGGATCAGAAC-CGGCGATT-TTCGCCAAA-A 472
Query 408 AGGTA-TGGCTTT--TGT----T-CT--TGG-ATAT-GACAACA-AGTCCTGTAAT-AAG 453
||| | ||||| ||| | || | | | ||||| | | ||||| | | |||
Sbjct 473 AGGCCGTAGCTTTGATGTCGGGTACTACTACCAAAAAGACAAGAGA-TCCTGGA-TCAAG 530
Query 454 AGCTACAAAATCTTGAGCT-TTAATTTTTGTAACAAGGATTCTGAAATCTACGAGTTT-A 511
||||||||| ||||| ||| ||| | | ||| ||| ||| |||||||||||| ||| |
Sbjct 531 AGCTACAAACTCTTGTGCTATTA-TCGTGGTACCAAATATTTTGAAATCTACGATTTTGA 589
Query 512 GCTCTGACTCATGGAGGGTTATTGATGATATCAA-GC-C-ACGCC--ACTACTTGGAATA 566
|||||| ||||||||| || |||||||||| | || | ||| | || ||||| ||
Sbjct 590 -CTCTGATTCATGGAGGATTCTTGATGATATTATCGCTCCACGGGGGAGTA-TTGGA-TA 646
Query 567 CTCTAGAAAGT-GTGTGTCTTTGAAGGGAAACACTTACTGGTTTGGTATAGATAG-AAGA 624
||| ||| | | |||||| |||| ||||| ||||||||||| | || || | | || |
Sbjct 647 CTCG-GAACTTAGCGTGTCTCTGAAAGGAAATACTTACTGGTTCGCTAAAGGT-GTAACA 704
Query 625 CGAAGTCTATG-GGACCCT-AGCATGGCCTTGCTCAAATTTGATTTTGGA-ACAGAGAAA 681
|||| | | || ||| | ||| | |||||||||||||||||| | |||||||||
Sbjct 705 -GAAG---A-GCGGCCCCGCACCATATCATTGCTCAAATTTGATTTTT-ATACAGAGAAA 758
Query 682 TTTGGGTATGTTCCTCTGCCTCGTCCATGTCA-AGTGCATGGT-TTTG--AGGCTTCTAA 737
| || || ||| ||| || ||| | ||| ||| | | || ||| | ||| ||
Sbjct 759 TCTG--TA----CCTGTGCTTCTTCCCTATCAGAGT-CGTCGTCTTTTCCAAGCTAGTAG 811
Query 738 TCTTTCCGTTGTCAGAGACGA-AAAGCTTTCGGTGTTATTAG-AGG-ACGGTTCTACA-T 793
||||| ||||| ||||| || ||| ||||| |||||||| | || | | | | | | |
Sbjct 812 CCTTTCTGTTGTTAGAGAAGATAAA-CTTTCTGTGTTATT-GCAGCTA-GAT-CAA-AGT 866
Query 794 -CCAAGACTGAGGTATGGGTGACAAATAAGATTGGTGAGA--AC-AATGT-G--GTGTCG 846
||||||||||| |||||||||||||| ||||| ||||| || || | | || ||
Sbjct 867 TCCAAGACTGAGATATGGGTGACAAATGTGATTGATGAGACCACCAAAGGAGCAGTTTCT 926
Query 847 TGGAGCAAGGTCTTAGCATTGTATCCGAGAGCTGAT-TT----TTGGCA-TGGCGCAAGT 900
|||| |||||||||||||||| || ||| || || || |||| | || | ||||
Sbjct 927 TGGACCAAGGTCTTAGCATTGGATTTGAGCCCTCATCTTCAGATTGGGAATGATGGAAGT 986
Query 901 TGCTTGCTAGACGAGGAGAAGAAAGTCGTCCTGTGT-TGTAAGAGTAAGAGATGGATG-G 958
| ||| |||| |||||| |||||||||||| ||| | ||| ||| || ||| |||| |
Sbjct 987 TTCTTCCTAGGCGAGGATAAGAAAGTCGTCATGT-TCTGTGAGA--AATTGATTGATGAG 1043
Query 959 AGGAAGG--A--GACAAGGTATACATTGTTGGAGAGGATAATAAAGTCAAAATAA-TGG- 1012
| |||| | |||| ||| ||||||||||| ||||||||| |||| | || |||
Sbjct 1044 AACAAGGTCAAAGACATGGTCTACATTGTTGGGGAGGATAATGTTGTCACAG-AAGTGGG 1102
Query 1013 ATTCTGGAGTTTAT-ACAATTGAAGGATCTTGTCCAACTATTCTTAATTATATTCCAAGT 1071
||| |||||| || | ||| || |||| | | || ||||||||||||| ||||||||
Sbjct 1103 ATT-TGGAGTAGATGA-AATGGATGGATGTCGGGCAGTTATTCTTAATTATGTTCCAAGT 1160
Query 1072 TTGGTTCAAATCGAGAGAGCTGGAGGCAAAAGAAAAAGAGG 1112
||||||||||||||| ||||||||||||| || ||||||||
Sbjct 1161 TTGGTTCAAATCGAGCGAGCTGGAGGCAACAGGAAAAGAGG 1201
> AT3G22350.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:7901905-7903041 FORWARD LENGTH=1137
Length=1137
Score = 102 bits (55), Expect = 7e-21
Identities = 81/93 (87%), Gaps = 4/93 (4%)
Strand=Plus/Plus
Query 24 GGATTTGGTAGAGGAGATACTCTGTCGCGTTCCGGCCACATCTCTGAAACGATTACGATC 83
|||||||||||| || ||||||| | ||| ||||||||||||||||||||||||||||
Sbjct 18 GGATTTGGTAGAAGAAATACTCTCAAGGGTTTCGGCCACATCTCTGAAACGATTACGATC 77
Query 84 CACTTGCAAA-AGATGGAAC-CATTTATTCAAA 114
||||||||| | ||||||| | ||||||||||
Sbjct 78 TACTTGCAAACA-ATGGAACAC-TTTATTCAAA 108
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 54869195685
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5