BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg318695 Length=927 Score E Sequences producing significant alignments: (Bits) Value AT3G19400.1 | Symbols: | Cysteine proteinases superfamily prot... 1029 0.0 AT3G19390.1 | Symbols: | Granulin repeat cysteine protease fam... 616 2e-175 AT1G47128.1 | Symbols: RD21, RD21A | Granulin repeat cysteine p... 145 9e-34 > AT3G19400.1 | Symbols: | Cysteine proteinases superfamily protein | chr3:6725468-6727000 FORWARD LENGTH=1253 Length=1253 Score = 1029 bits (557), Expect = 0.0 Identities = 695/761 (91%), Gaps = 11/761 (1%) Strand=Plus/Plus Query 172 GAACCTAAAGATTTC-ATGAAAGCTGACAGATATTTGTACAAAGAAGGAGATATTTTGCC 230 ||| ||||||| ||| ||||| |||| |||||||||||||||||||||||| ||||||| Sbjct 377 GAA-CTAAAGA-TTCGGTGAAAACTGAGAGATATTTGTACAAAGAAGGAGATGTTTTGCC 434 Query 231 TGATGAAATCGATTGGAGAGCGAAAGGTGCAGTTGTACCAGTCAAAGATCAAGGAAACTG 290 ||||||| | |||||||||||||| || |||||||| |||||||||||||||||||||| Sbjct 435 TGATGAAGTAGATTGGAGAGCGAATGGCGCAGTTGTTTCAGTCAAAGATCAAGGAAACTG 494 Query 291 TGGAAGTTGTTGGGCGTTTTCTGCGGTTGGAGCAGTGGAAGGGATAAACCAGATCAAGAC 350 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct 495 TGGAAGTTGTTGGGCGTTTTCTGCGGTTGGAGCAGTGGAAGGGATCAACCAGATCACTAC 554 Query 351 CGGAGAATTGATATCTTTGTCAGATCAAGAACTCATTGACTGTGACAGAGGCTTTGTTAA 410 |||||| |||||||||||||| || ||||||||| |||||||||||||||| ||||| || Sbjct 555 CGGAGAGTTGATATCTTTGTCGGAGCAAGAACTCGTTGACTGTGACAGAGGTTTTGTCAA 614 Query 411 CGCTGGATGTGAAGGAGGTCTCATGGACTATGCTTTTGAGTTCATTATCAAGAATGGTGG 470 |||||||||||| |||||| ||||| |||||||||||||||||||||| || |||||||| Sbjct 615 CGCTGGATGTGATGGAGGTATCATGAACTATGCTTTTGAGTTCATTATGAAAAATGGTGG 674 Query 471 TATTGAGACAGATCAAGATTACCCTTATACCGCCACCGATCTTGGCGTGTGCAATGCCGA 530 ||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||| || Sbjct 675 TATTGAGACAGATCAAGATTACCCTTATAACGCCAACGATCTTGGCTTGTGCAATGCAGA 734 Query 531 TAAGAAGAACAACACTCGTGTTGTTA-AGATCGATGGTTACGA-GTATGTTGCTCAAA-A 587 |||||| ||||| ||||||||||||| | || |||||||| || | ||||| || | | | Sbjct 735 TAAGAATAACAATACTCGTGTTGTTACA-ATTGATGGTTATGAAG-ATGTTCCT-AGAGA 791 Query 588 CGATGAGAAGTCTTTGAAGAAAG-CTGTTGCTCATCAACCTGTTGGTGTTGCCATTGAAG 646 |||||||||||||||||| |||| |||||||||||||||||||| ||||||| ||||||| Sbjct 792 CGATGAGAAGTCTTTGAA-AAAGGCTGTTGCTCATCAACCTGTTAGTGTTGCTATTGAAG 850 Query 647 CCAGTAGCCAAGCTTTCAAGCTTTACAAATCCGGTGTGTTTACAGGAACATGTGGAATAT 706 | ||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||| Sbjct 851 CTAGTAGCCAAGCTTTCCAGCTTTACAAATCCGGTGTGATGACAGGAACATGTGGAATAT 910 Query 707 ATTTGGACCATGGTGTGGTAGTGGTTGGGTATGGAACCTCAAGTGGTGAAGATTACTGGA 766 ||||||||||||||| ||||||||||| |||||| || |||||||||||||||| |||| Sbjct 911 CTTTGGACCATGGTGTAGTAGTGGTTGGATATGGATCCACAAGTGGTGAAGATTATTGGA 970 Query 767 TCATTCGTAATTCATGGGGATTGAATTGGGGAGATAACGGTTATGTTAAGCTCCAACGTA 826 ||||||| ||||||||||| |||||||||||||||| |||||| |||||||||||||||| Sbjct 971 TCATTCGCAATTCATGGGGGTTGAATTGGGGAGATAGCGGTTACGTTAAGCTCCAACGTA 1030 Query 827 ACATCGATGATTCATTTGGGAAATGCGGTGTAGCAATGATGCCTTCTTACCCAACCAAAT 886 ||||||||||| ||||||||||||| ||| |||||||||||||||||||||| ||||||| Sbjct 1031 ACATCGATGATCCATTTGGGAAATGTGGTATAGCAATGATGCCTTCTTACCCGACCAAAT 1090 Query 887 CATCATTCCCATCGTCATTTGATTTTTTGTCTGAGATTTGA 927 ||||||||||||||||||||||||| ||||||||||||||| Sbjct 1091 CATCATTCCCATCGTCATTTGATTTGTTGTCTGAGATTTGA 1131 Score = 231 bits (125), Expect = 7e-60 Identities = 155/170 (91%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 1 ATGTACGAGCGATGGCTCGTGGAGAATCGGAAGAACTATAATGGTCTTGGAGAGAAAGAG 60 |||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct 169 ATGTACGAGCAATGGCTTGTGGAGAATCGAAAGAACTATAATGGTCTTGGAGAGAAAGAG 228 Query 61 AGACGATGCAAGATCTTCAAAGAAAACTTGAAGTTCATAGACGAACACAATTCTCTTCCG 120 ||||||| ||||||||||||||| ||||||||||| | || |||||||||||| ||||| Sbjct 229 AGACGATTCAAGATCTTCAAAGACAACTTGAAGTTTGTCGATGAACACAATTCTGTTCCG 288 Query 121 AATCAGACTTTTGAAGTCGGGTTGACCCGGTTCGCAGATCTAACAAATGA 170 ||| |||||||||||| ||||||||| ||||||| |||||||||||||| Sbjct 289 GATCGGACTTTTGAAGTAGGGTTGACCAGGTTCGCTGATCTAACAAATGA 338 > AT3G19390.1 | Symbols: | Granulin repeat cysteine protease family protein | chr3:6722989-6725027 FORWARD LENGTH=1653 Length=1653 Score = 616 bits (333), Expect = 2e-175 Identities = 580/698 (83%), Gaps = 22/698 (3%) Strand=Plus/Plus Query 202 TATTTGTACAAAGAAGGAGATATTTTGCCTGATGAAATCGATTGGAGAGCGAAAGGTGCA 261 |||||||| || | ||||||| || ||||||| |||||||||||||| |||||||| Sbjct 396 TATTTGTATAAGGTTGGAGATAGCTTACCTGATGCTATCGATTGGAGAGCTAAAGGTGCT 455 Query 262 GTTGTA-CCAGTCAAAGATCAAGGAAACTGTGGAAGTTGTTGGGCGTTTTCTGCGGTTGG 320 ||| | |||||||||||||||||| |||||||||||||||||||||||| ||| |||| Sbjct 456 GTT-AATCCAGTCAAAGATCAAGGATCCTGTGGAAGTTGTTGGGCGTTTTCCGCGATTGG 514 Query 321 AGCAGTGGAAGGGATAAACCAGATCAAGACCGGAGAATTGATATCTTTGTCAGATCAAGA 380 ||| || ||||| ||||| ||||| ||||| ||||| |||||||||||||| || ||||| Sbjct 515 AGCGGTTGAAGGTATAAATCAGATTAAGACAGGAGAGTTGATATCTTTGTCTGAGCAAGA 574 Query 381 ACTCATTGACTGTGACAGAGGCTTTGTTAACGCTGGATGTGAAGGAGGTCTCATGGACTA 440 ||| |||| ||||||| | | || || | |||||||| |||||||| ||||| || Sbjct 575 ACTTGTTGATTGTGACACAAG--TT-ACAATGATGGATGTGGTGGAGGTCTTATGGATTA 631 Query 441 TGCTTTTGAGTTCATTA-TCAAGAATGGTGGTATTGAGACAGATCAAGATTACCCTTATA 499 ||||||| ||||||||| | || || ||||||||||| ||||| ||||||| ||||||| Sbjct 632 TGCTTTTAAGTTCATTATTGAA-AACGGTGGTATTGATACAGAGGAAGATTATCCTTATA 690 Query 500 CCGCCACCGATCTTGGCGTGTGCAATGCCGATAAGAAGAACAACACTCGTGTTGTTAAGA 559 || || ||| || |||||||||| | ||||||||| |||||||||||||||| | Sbjct 691 TTGCAACTGATGTTAACGTGTGCAATTCTGATAAGAAG---AACACTCGTGTTGTTACCA 747 Query 560 TCGATGGTTACGAGTATGTTGCTCAAAACGATGAGAAGTCTTTGAAGAAAGCTGTTGCTC 619 |||||||||| ||| ||||| |||||||||||||||||||||||||||| ||| ||||| Sbjct 748 TCGATGGTTATGAGGATGTTCCTCAAAACGATGAGAAGTCTTTGAAGAAGGCTCTTGCTA 807 Query 620 ATCAACCTGTTGGTGTTGCCATTGAAGCCAGTAGCCA-AGCTTTCAAGCTTTACAAATCC 678 |||||||| || |||||||||||||||| || || | ||||||| ||||||||| ||| Sbjct 808 ATCAACCTATTAGTGTTGCCATTGAAGCTGGTGGC-AGAGCTTTCCAGCTTTACACATCT 866 Query 679 GGTGTGTTTACAGGAACATGTGGAATATATTTGGACCATGGTGTGGTAG-TGGTTGGG-T 736 ||||||||||||||||||||||||| || ||||||||||||||| |||| || | ||| | Sbjct 867 GGTGTGTTTACAGGAACATGTGGAACATCTTTGGACCATGGTGTTGTAGCTG-T-GGGAT 924 Query 737 ATGGAACCTCAAG-TGGTGAAGATTACTGGATCATTCGTAATTCATGGGGATTGAATTGG 795 | ||| | ||| |||| |||| |||||||| ||||||| |||||||||| || ||| Sbjct 925 ACGGATCAG-AAGGTGGTCAAGACTACTGGATTGTTCGTAACTCATGGGGATCAAACTGG 983 Query 796 GGAGATAA-CGGTTA-TGTTAAGCTCCAACGTAACATCGATGATTCATTTGGGAAATGCG 853 ||||| || ||| || | |||||||| ||||||||||| | || |||| |||||||||| Sbjct 984 GGAGA-AAGCGGATACT-TTAAGCTCGAACGTAACATCAAAGAGTCATCAGGGAAATGCG 1041 Query 854 GTGTAGCAATGATGCCTTCTTACCCAACCAAATCATCA 891 |||| || |||||| |||||||||| |||||||||||| Sbjct 1042 GTGTGGCGATGATGGCTTCTTACCCTACCAAATCATCA 1079 > AT1G47128.1 | Symbols: RD21, RD21A | Granulin repeat cysteine protease family protein | chr1:17282825-17285670 REVERSE LENGTH=1764 Length=1764 Score = 145 bits (78), Expect = 9e-34 Identities = 183/232 (79%), Gaps = 13/232 (6%) Strand=Plus/Plus Query 271 GTCAAAGATCAAGGAAACTGTGGAAGTTGTTGGGCGTTTTCTGCGGTTGGAGCAGTGGAA 330 ||||||||||| || || || ||||||||||||||||| | |||||||||||| | Sbjct 515 GTCAAAGATCAGGGTGGTTGCGGGAGTTGTTGGGCGTTTTCAACCATTGGAGCAGTGG-A 573 Query 331 GGG-ATAAACCAGATC-AAGACCGGAGAATTGATATCTTTGTCAGATCAAGAACTCATTG 388 ||| |||||||||||| | |||||||| | ||| | ||||| || ||||| | | | Sbjct 574 GGGAATAAACCAGATCGTA-ACCGGAGACCTAATAACCTTGTCTGAACAAGAGTTGGTCG 632 Query 389 ACTGTGACAGAGGCTTTGT-TAACGCTGGATGTGAA-GGAGGTCTCATGGACTATGCTTT 446 | |||||| | ||| | |||| || ||| || |||||||| |||||||||||||| Sbjct 633 ATTGTGAC--A--CTTCATACAACGAAGGTTGT-AACGGAGGTCTTATGGACTATGCTTT 687 Query 447 TGAGTTCATTATCAAGAATGGTGGTATTGAGACAGATCAA-GATTACCCTTA 497 |||||||||||||||||||||||| || || ||||| ||| ||||| ||||| Sbjct 688 TGAGTTCATTATCAAGAATGGTGGAATCGATACAGA-CAAAGATTATCCTTA 738 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 45311200594 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5