BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg318850 Length=1230 Score E Sequences producing significant alignments: (Bits) Value AT1G51540.1 | Symbols: | Galactose oxidase/kelch repeat superf... 1275 0.0 > AT1G51540.1 | Symbols: | Galactose oxidase/kelch repeat superfamily protein | chr1:19115561-19117534 FORWARD LENGTH=1542 Length=1542 Score = 1275 bits (690), Expect = 0.0 Identities = 943/1067 (88%), Gaps = 10/1067 (1%) Strand=Plus/Plus Query 169 AAGAAGAAGAAGGATAAAGTTCGGGAAAGGAAACTTTCTGCA-ACGTTTCAAGATTTAG- 226 |||||||||||||||| || |||||||||||| ||| | |||||||||||||| | Sbjct 328 AAGAAGAAGAAGGATAGTGTGAAGGAAAGGAAACTGTCT-AATACGTTTCAAGATTT-GC 385 Query 227 CTGCTCCTGAACTCAAATGGGAGAAGATGACAGCTGCTCCTGTGCCTCGTCTTGATGGAG 286 ||||||||||| | ||||||||||||||| ||||| | ||||| |||||||| || |||| Sbjct 386 CTGCTCCTGAATTGAAATGGGAGAAGATGGCAGCTTCACCTGTACCTCGTCTAGACGGAG 445 Query 287 CTGCGATTCAGATTAGGAATTTTCTATATGTGTTTGCTGGTTACGGCACCATTGATATTG 346 |||| |||||||||||| || |||| ||||| |||||||| || || ||||||||| ||| Sbjct 446 CTGCAATTCAGATTAGGGATCTTCTTTATGTATTTGCTGGATATGGAACCATTGATCTTG 505 Query 347 TACATTCCCATGTTGATATATACAATTTCGTTGATAA-TACATGGGGAGGAAGATTTGAT 405 | ||||| ||||| ||||| ||||||||| |||||| | | |||||||||||||| || Sbjct 506 TGCATTCACATGTCGATATCTACAATTTCACTGATAACT-CGTGGGGAGGAAGATTCAAT 564 Query 406 ATGCCAAAAGAGATGGCACATTCACATTTAGGGATGGTTACGGATGGAAGATACATCTAC 465 ||||||||||| ||||| ||||| |||||||||||||| |||||||| ||||||| || Sbjct 565 ATGCCAAAAGATATGGCGCATTCTCATTTAGGGATGGTAACGGATGGGCGATACATTTAT 624 Query 466 ATTGTTACTGGTCAATATGGTCCTCAATGTAGAGGGCCTACAGCTAAAACATTTGTGCTT 525 |||||||||||||| | |||||| ||||| ||||| |||||||||||||||||||||||| Sbjct 625 ATTGTTACTGGTCAGTTTGGTCCACAATGCAGAGGTCCTACAGCTAAAACATTTGTGCTT 684 Query 526 GACACTGATACAAATTCGTGG-AGTGACTTTGTTCCTTTTCCAGTTCCTAGGTATGCTCC 584 || |||||||||||| | ||| || |||||||||||||| ||||||||||||||||| || Sbjct 685 GATACTGATACAAATACATGGAAG-GACTTTGTTCCTTTACCAGTTCCTAGGTATGCACC 743 Query 585 AGCTACTCAGCTATGGAGAGGAAGACTCCACGTGATGGGTGGAAGCAAGGAGAATCGGCA 644 |||||||||||| |||||||||||||| || ||||||||||||||||| |||||||| Sbjct 744 AGCTACTCAGCTTTGGAGAGGAAGACTTCATGTGATGGGTGGAAGCAAAGAGAATCGATT 803 Query 645 CACACCAGGGCTTGAACACTGGAGTATTGCAGTAAAAGATGGGAAAGCAATGGAAAAGGA 704 |||||||| |||||||| ||||| || ||||| |||||||| ||| | ||||||| || Sbjct 804 TACACCAGGACTTGAACATTGGAGCATCGCAGTGAAAGATGGCAAATCTTTGGAAAATGA 863 Query 705 GTGGAGAAGTGAAATTCCAATCCCTCGTGGAGGACCTCACAGAGCATGTGTGGTAGTGGA 764 ||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||| || Sbjct 864 GTGGAGAAGTGAAATCCCGATCCCTCGTGGAGGACCTCACAGGGCATGTGTAGTAGTTGA 923 Query 765 TGACCGGCTTTTTGTCATTGGTGGTCAAGAAGGTGATTTCATGGCTAAACCAGGATCTCC 824 |||||| || ||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct 924 TGACCGACTATTTGTAATTGGTGGTCAAGAAGGTGATTTCATGGCTAAACCTGGATCTCC 983 Query 825 TATTTTCAAATGCTCACGCCGTATGGAGGTGGTGTTCAGTGATGTCTACATGCTGGATGA 884 || ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| Sbjct 984 AATCTTCAAATGCTCACGCCGTATGGAGGTGGTATTCAGTGATGTCTACATGTTGGATGA 1043 Query 885 GGAAATGAAGTGGAAAGTTATGCCATCGATGCCAAAACCCGATTCCCATATTGAATTTGC 944 ||||||||| |||||||||||||| ||||||||||||| || |||||||| |||||||| Sbjct 1044 GGAAATGAAATGGAAAGTTATGCCGCCGATGCCAAAACCGGACTCCCATATCGAATTTGC 1103 Query 945 TTGGAAAGTTGTTAACAACTCCATTGTAATCGTTGGAGGCACCACAGAGAAGCATCCTGA 1004 ||||||||| ||||| |||||||||||||||||||||||||| |||||||| |||||||| Sbjct 1104 TTGGAAAGTCGTTAATAACTCCATTGTAATCGTTGGAGGCACAACAGAGAAACATCCTGA 1163 Query 1005 AACCAAAAAGATGGTCCTTGTTGGTGAAATCTTCCAGTTCAACCTGAATACAATGAAATG 1064 ||||||||||||||| || |||||||||||||||||||||||| | |||||| ||||||| Sbjct 1164 AACCAAAAAGATGGTTCTCGTTGGTGAAATCTTCCAGTTCAACTTAAATACACTGAAATG 1223 Query 1065 GTATGTGATTGG-AAAGTTGCCATACCGTGTGAAGACTACGCTGGTTGGGTATTGGGAGG 1123 |||||||||||| ||| || ||||||||||||||||| ||||||| |||||||||||| | Sbjct 1224 GTATGTGATTGGGAAA-TTACCATACCGTGTGAAGACAACGCTGGCTGGGTATTGGGATG 1282 Query 1124 GGCAGTTATACTTCACCTCGGGGCAACGAGACAAAGGGCCAGATGATCCCGCACCGCGTA 1183 | ||||||||||||||||| || ||| |||||||||| |||||||||||||| ||| | | Sbjct 1283 GACAGTTATACTTCACCTCAGGACAAAGAGACAAAGGTCCAGATGATCCCGCCCCGAGGA 1342 Query 1184 AGGTGATGGCAGAGATGTGGAGAACCAAACTGATATTGAATCCATGA 1230 |||| |||||||||||||||||||||||| ||||| | || |||||| Sbjct 1343 AGGTCATGGCAGAGATGTGGAGAACCAAATTGATACTCAACCCATGA 1389 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 60441456180 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5