BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg318900 Length=1125 Score E Sequences producing significant alignments: (Bits) Value AT3G21600.1 | Symbols: | Senescence/dehydration-associated pro... 1729 0.0 > AT3G21600.1 | Symbols: | Senescence/dehydration-associated protein-related | chr3:7606507-7608407 REVERSE LENGTH=1396 Length=1396 Score = 1729 bits (936), Expect = 0.0 Identities = 1063/1126 (94%), Gaps = 2/1126 (0%) Strand=Plus/Plus Query 1 ATGGGATGTTTCGGACCATCAAAGACTTCAAGAACAAGAAACCATGAAAAAGA-AACGAT 59 |||||||||||||||||||||||| ||||||||||||||||| ||||| | || || ||| Sbjct 44 ATGGGATGTTTCGGACCATCAAAGGCTTCAAGAACAAGAAACAATGAACATGACAA-GAT 102 Query 60 GACACGACAAAACCCATCTCCTCAACCTCAAACCATGAGAACCGAAGAAGCTCTGTTGCA 119 |||||||||||||| |||| ||||||||||||||||||| | ||||||| ||||||||| Sbjct 103 AACACGACAAAACCCCTCTCATCAACCTCAAACCATGAGAGCTGAAGAAGTTCTGTTGCA 162 Query 120 GATTCCTAGATGTAGAGTCCATCTCATAGACGAATCCGAAGCCGTGGAGCTTGCTTCCGG 179 ||||||||||||||||||||||||||||| ||||||||| || ||||||||||| || || Sbjct 163 GATTCCTAGATGTAGAGTCCATCTCATAGGCGAATCCGAGGCGGTGGAGCTTGCCTCTGG 222 Query 180 TGATTTCAAGCTCGTTAAGGTCTCCGACAACGGTGTGACTCTAGCTATGATTGTAAGAAT 239 |||||||||||||||||||||||| ||||||||||| |||||||||||||| || ||||| Sbjct 223 TGATTTCAAGCTCGTTAAGGTCTCAGACAACGGTGTAACTCTAGCTATGATCGTGAGAAT 282 Query 240 CGGACATGACCTTCAGTGGCCAGTGATTAGAGACGAGCCAGTGGTGAAACTCGACGCACG 299 ||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| || Sbjct 283 CGGACATGACCTTCAGTGGCCAGTGATTAGAGATGAGCCAGTGGTAAAACTTGACGCCCG 342 Query 300 TGACTACCTCTTCACACTTCCGGTTAAAGACGGTGATCCACTTAGCTACGGTGTCACTTT 359 ||| ||||||||||| || |||||||||||||||||||||||||||||||| |||||||| Sbjct 343 TGATTACCTCTTCACTCTCCCGGTTAAAGACGGTGATCCACTTAGCTACGGGGTCACTTT 402 Query 360 CTCCGGCGATGACAGAGACGTAGCCCTCGTGAACAGTCTGAAGTTGCTTGACCAATTCTT 419 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 403 CTCTGGCGATGACAGAGACGTAGCCCTCGTGAACAGTCTGAAGTTGCTTGACCAATTCTT 462 Query 420 GAGTGAGAATTCTTGTTTCTCGTCTACGGCTTCGAGTAAGGTTAACAATGGAATCGACTG 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 463 GAGTGAGAATTCTTGTTTCTCGTCTACGGCTTCGAGTAAGGTTAACAATGGAATCGACTG 522 Query 480 GCAAGAGTTTGCGCCGAGGATTGAAGACTATAACAACGTTGTTGCTAAGGCTATTGCTGG 539 ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct 523 GCAAGAGTTTGCGCCGAGGATTGAAGATTACAACAACGTTGTTGCTAAGGCTATTGCTGG 582 Query 540 AGGAACAGGACATATCATTAGAGGAATCTTTAGTCTCAGTAATGCTTACTCTAACCAGGT 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 583 AGGAACAGGACATATCATTAGAGGAATCTTTAGTCTCAGTAATGCTTACTCTAACCAGGT 642 Query 600 TCACAAGGGAGGTGACATAATGATTACAAAGGCTGAAGAGAGTCAGAGAAATGGAGGTTA 659 |||||||||||| ||||||||||||||||||||||| ||||| |||||||||||| |||| Sbjct 643 TCACAAGGGAGGCGACATAATGATTACAAAGGCTGAGGAGAGCCAGAGAAATGGAAGTTA 702 Query 660 CAATAATGGAAACTCCAGTGGTAATGAGAAGAAAAATGGAATCAACACAAACCTTCAACG 719 ||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| Sbjct 703 CAACAATGGAAACTCCAGTGGTAATGAGAAGAAAAATGGGATCAACACACACCTTCAACG 762 Query 720 AGTGAGGAAGCTGTCAAAGGCGACTGAGAATCTGAGCAAGACGATGTTGAATGGTGCGGG 779 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 763 AGTGAGGAAGCTGTCAAAGGCGACTGAGAATCTGAGCAAGACGATGTTGAATGGTGCGGG 822 Query 780 AGTTGTGAGTGGCTCTGTGATGGTCCCTGTGATGAAGTCGAAACCGGGGATGGCCTTCTT 839 ||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct 823 AGTTGTGAGCGGCTCTGTGATGGTCCCTATGATGAAGTCGAAACCAGGGATGGCCTTCTT 882 Query 840 CTCCATGGTTCCAGGGGAAGTCCTCTTGGCTTCACTTGACGCCCTTAATAAAATACTAGA 899 || |||||||||||||| |||||||| ||||||||||| |||||||||||||||||||| Sbjct 883 TTCGATGGTTCCAGGGGAGGTCCTCTTAGCTTCACTTGATGCCCTTAATAAAATACTAGA 942 Query 900 TGCAACTGAAGCCGCGGAGAGACAAACTCTATCTGCTACATCCAGGGCTGCTACCAGAAT 959 |||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||| Sbjct 943 TGCAACTGAAGCTGCAGAGAGACAAACTCTATCTGCAACATCCAGGGCTGCTACCAGAAT 1002 Query 960 GGTCAGTGAGAGGTTTGGAGAGAACGCAGGGGAGGCTACGGGAGACGTTCTAGCAACAGC 1019 ||||||||||||||||||||| |||||||||||||| || ||||| |||||||||||||| Sbjct 1003 GGTCAGTGAGAGGTTTGGAGATAACGCAGGGGAGGCCACCGGAGATGTTCTAGCAACAGC 1062 Query 1020 TGGCCACGCGGCTGGAACTGCCTGGAATGTTCTCAAGATCCGCAAGACTTTTTATCCTTC 1079 |||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct 1063 GGGCCACGCAGCTGGAACTGCCTGGAATGTTCTCAAGATCCGTAAGACTTTCTATCCTTC 1122 Query 1080 ATCTTCTCTCACATCCGGGGTCGTCAAAAATGCCCCAAGAAAGTGA 1125 ||||||||| ||||| || ||||||||||||| |||||||||||| Sbjct 1123 ATCTTCTCTTACATCAGGAATCGTCAAAAATGCTCCAAGAAAGTGA 1168 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 55170398955 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5