BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg318931 Length=771 Score E Sequences producing significant alignments: (Bits) Value AT3G21945.1 | Symbols: | Receptor-like protein kinase-related ... 512 2e-144 AT2G31620.1 | Symbols: | Receptor-like protein kinase-related ... 390 9e-108 AT3G21960.2 | Symbols: | Receptor-like protein kinase-related ... 372 3e-102 > AT3G21945.1 | Symbols: | Receptor-like protein kinase-related family protein | chr3:7732458-7733294 FORWARD LENGTH=473 Length=473 Score = 512 bits (277), Expect = 2e-144 Identities = 311/328 (95%), Gaps = 0/328 (0%) Strand=Plus/Plus Query 444 GGATGTGAGCGGTGATACAAATTCGTTCAACGAGAAGACGAGGGCTCTCCTCTATAAGCT 503 |||||||||||||||| |||| || |||||||||||||||||| |||||||||||||||| Sbjct 132 GGATGTGAGCGGTGATGCAAAATCATTCAACGAGAAGACGAGGACTCTCCTCTATAAGCT 191 Query 504 GAAGGAGAAAGCAAGTAGTAAAGAAAACATCCCCAACAAGAAAAATTACTTATATGCAAC 563 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 192 GAAGGAGAAAGCAAGTAGTAAAGAAAACATCCCCAACAAGAAAAATTACTTATATGCAAC 251 Query 564 AGGGGAGGAAAGTCTCGGGAAGATGAAATTGTACGCAATGGTGCAGTGTACACAAGACTT 623 |||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||| Sbjct 252 AGGGGAGGAAAGTCTCGGGAAGATGAAACTGTACGCAATGGTGCAATGTACGCAAGACTT 311 Query 624 ATCAATAAAAAATTGTAGTGTGTGTTTGAACTGGATTCTTGCGAAGTTTCCCAAATGCTG 683 |||||| |||||||||| ||||||||||||||||||||| | |||| |||||||||| || Sbjct 312 ATCAATTAAAAATTGTAATGTGTGTTTGAACTGGATTCTGGGGAAGCTTCCCAAATGTTG 371 Query 684 CAACGGTAAACAAGGAGGAAGATTTTTGAGTACAAGTTGTAATTTTAGGTATGAGCTTTA 743 ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 372 CAACGATAAACAAGGAGGAAGATTTTTGAGTACGAGTTGTAATTTTAGGTATGAGCTTTA 431 Query 744 CCCCTTTGTAAAACTTACGACTAGTTAA 771 || |||||||||||||||||||| |||| Sbjct 432 CCTCTTTGTAAAACTTACGACTATTTAA 459 Score = 211 bits (114), Expect = 7e-54 Identities = 126/132 (95%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 196 ATGATTTCTATCTCAATTTTAGGCGACGTTGTCGTTTTTAGCGGTGATAATTCCATCTAC 255 ||||| ||||||||||||||||| ||||||||||| ||||||||||| |||||||||||| Sbjct 1 ATGATCTCTATCTCAATTTTAGGTGACGTTGTCGTCTTTAGCGGTGACAATTCCATCTAC 60 Query 256 GTCAAGCTCCAGTGCCGGGGGGACTCCTCCACATCCAAGTGCCGCTCTTGCCTTGATACC 315 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct 61 GTCAAGCTCCAGTGCCGGGGGGACTCCTCCACATCCACGTGCCGCTCTTGCCTTGACACC 120 Query 316 GCCTTCTCTGGG 327 |||||||||||| Sbjct 121 GCCTTCTCTGGG 132 > AT2G31620.1 | Symbols: | Receptor-like protein kinase-related family protein | chr2:13451991-13452908 REVERSE LENGTH=768 Length=768 Score = 390 bits (211), Expect = 9e-108 Identities = 587/759 (77%), Gaps = 63/759 (8%) Strand=Plus/Plus Query 41 CTATCTTGGCCATGGTGGCCATGCAACTCTCTTTTGTACAGTGTGTTTTGTCCCTAAACC 100 ||||||||| | |||||||||||||| |||||||| | || ||||||||||||||| | Sbjct 26 CTATCTTGGTCGTGGTGGCCATGCAATTCTCTTTTATCCACAATGTTTTGTCCCTAAATC 85 Query 101 AAACAAATGAGTATCTACACCACATATGCCTTAATC-GTCAAGGAACATACAAGTC-AGG 158 | || ||| |||||| || ||||||||| | || | || |||||| ||||||| | | | Sbjct 86 AGACCAATTCGTATCTGCAACACATATGCATCAA-CAGTGAAGGAAAATACAAGGCAAAG 144 Query 159 TAGTAAAGACGAGAG-AGATCTTAACA-ATC-TCATC--CA-AATG----A-TTTCTA-T 206 | | | ||||||| ||| || || | ||| || || || ||| | ||||| Sbjct 145 -AATTCATACGAGAGCAGA-CTCAA-AGATCATC-TCGACAGTATGTCTAACATTCTAGA 200 Query 207 CT-CAATTTTAGGCGACGTTGTCGTTTTTAGCGG-TGATAATTCCAT-CTACGTCAA-GC 262 || | ||| | | ||| ||| | | | |||| | || | || | |||| |||| || Sbjct 201 CTACGGTTTCA-TCCACGGTGTTGGTGGT-GCGGATTCTAGTACC-TACTACATCAAGGC 257 Query 263 TCCAGTGCCGGGGGGACT-CCTCC-ACATCCAAGTGCCGCTCTTGCCT-TGATACCGCCT 319 ||| || ||||| || | ||||| | ||||||||||||||||||||| | |||||||| Sbjct 258 -CCAATGTCGGGGAGA-TGCCTCCGA-ATCCAAGTGCCGCTCTTGCCTCT-TTACCGCCT 313 Query 320 TCTCTGGG------A--AGATGTCCCAACAACA-A---AGAATAATATGGTACGACAACT 367 |||||||| | |||||||| ||||||| | |||||||||||||||||||||| Sbjct 314 TCTCTGGGATTCTTAGGAGATGTCCGAACAACAGAGGGAGAATAATATGGTACGACAACT 373 Query 368 GTGTTCTC-ACAATTT-TAACG-TTTCATACGTATG-GCAAGATCGATTACCAGAACAAT 423 || ||||| || |||| | | | | |||| || | | ||||| |||| | || || || Sbjct 374 GTTTTCTCTAC-ATTTCCGA-GATAT-ATACCTACGAG-AAGATTGATTTCAAGCACTAT 429 Query 424 TTCTATATTTC-CAATG-CAAAGGATGTGAGCGGTGATACAAA-TTCGTTCAACGAGAAG 480 || ||| || | ||||| |||| ||||||||||| ||| ||| || ||||||| |||| Sbjct 430 TTGTAT-TTGCACAATGCCAAA-GATGTGAGCGGCAATAAAAAGTT-GTTCAACAAGAAC 486 Query 481 ACGAGGGCTCTCCTCTATAAGCTGAAGGAGAAAGCAAGTAGTAAAGAA-AACATCCCCA- 538 || | ||||||||| ||||||| ||||||||||||| | |||||||| || | || | Sbjct 487 ACAAAGGCTCTCCTAGATAAGCTCAAGGAGAAAGCAATTCGTAAAGAACAAGAGCCTTAC 546 Query 539 ACAAGAAAAATTACTTATATGCAACAGGGGAGGAAAGTCTCGGGAAGATGAAATTGTACG 598 ||||| | | ||| | |||||| | ||||||||||||||||||| || ||||||||| | Sbjct 547 ACAAG--AGACTACATGTATGCAGCGGGGGAGGAAAGTCTCGGGACGACGAAATTGTATG 604 Query 599 CAATGGTGCAGTGTACACAAGACTTATCAATAAAAAATTGTAGTGTGTGTTTGAACTGGA 658 ||| ||||||||||||||||||||||| | |||||||| |||||||||||| | | || Sbjct 605 GGATGATGCAGTGTACACAAGACTTATCAGTTAAAAATTGCAGTGTGTGTTTGGATTCGA 664 Query 659 TTCTTGCGAAGTTTCCCAAATGCTGCAACGGTAAACAAGGAGGAAGATTTTTGAGTACAA 718 || |||| ||| |||||| |||||||||||||||||||||||||||| |||||| | | | Sbjct 665 TTATTGCAAAGCTTCCCAGATGCTGCAACGGTAAACAAGGAGGAAGAGTTTTGAATCCGA 724 Query 719 GTTGTAATTTTAGGTATGAGCTTTACCCCTTTGTAAAAC 757 |||||| ||||||||| ||||| || || |||||||||| Sbjct 725 GTTGTACTTTTAGGTACGAGCTCTATCCTTTTGTAAAAC 763 > AT3G21960.2 | Symbols: | Receptor-like protein kinase-related family protein | chr3:7737156-7739542 FORWARD LENGTH=1326 Length=1326 Score = 372 bits (201), Expect = 3e-102 Identities = 602/783 (77%), Gaps = 77/783 (10%) Strand=Plus/Plus Query 1 ATGTCTTCAT-C-CTT-TGTAACAAAACGACTC-T-TTTCGGTCC-CTATCTTGGCCATG 54 ||||||| || | ||| |||||| |||| | || | |||||| || | || || ||||| Sbjct 1 ATGTCTTTATCCTCTTCTGTAACGAAAC-A-TCTTATTTCGG-CCTCCATATTAGCCATA 57 Query 55 GTGGCCATGCAACTCTCTTTTGTACAGTGTGTTTTGTCCCTAAACCAAACAAATG-AGTA 113 ||||| ||||||||| ||| |||||| ||||||| ||||||||| | || |||| | || Sbjct 58 GTGGCAATGCAACTCCCTTCTGTACACAGTGTTTTATCCCTAAACGAGACCAATGCA-TA 116 Query 114 TCTACACCACATATGCCTTAATC-GTCAAGGAACATACAAGTCAGGTAGTAAAGACGAG- 171 ||| |||||||||||| |||| | || |||| |||| |||||| || ||| | ||||| Sbjct 117 TCTGCACCACATATGCATTAA-CGGTGAAGGGACATTCAAGTCGGGGAGTCCATACGAGA 175 Query 172 -AGAGATCTTAACAATCTCATCCAAATGATTTCTATCTCAAT--TTTAGGCGACG-TTGT 227 ||| ||| ||||| ||||| |||||| | | || || |||| | | | | | Sbjct 176 AAGAAATC-AAACAA-CTCAT-----TGATTT-TTTGTC-ATCGTTTA-TCAAAGACTAT 225 Query 228 CGTTTT-T--A--GCG---GTGATAAT--T-CC------ATCTACGTCAAGCTCCAGTGC 270 ||||| | | ||| ||| || | | || ||| |||||||| |||||||| Sbjct 226 AGTTTTGTCCACGGCGTTAGTGGTATTGGTCCCGATGATATCAACGTCAAGTTCCAGTGC 285 Query 271 CGGGGGGACT-CC-TCCACATCCAAGTGCCGCTCTTGCCTTGATACCGCCTTCTCTG-G- 326 || || || | || | || | ||||||||||||||||||| | ||||||||||| | | Sbjct 286 CGAGGCGA-TACCTTACA-AGCCAAGTGCCGCTCTTGCCTCGCCACCGCCTTCTCCGAGA 343 Query 327 ---G-A--AGATGTCCCAACAAC-AA---AGAATAATATGGTACGACAACTGTGTTCTCA 376 | | | |||||| |||||| || ||||||||||||||||| |||||| |||| Sbjct 344 TTCGTAGTAAATGTCCGAACAACAAAGGGAGAATAATATGGTACGATAACTGTCATCTC- 402 Query 377 CAATTTTAACGT--TTC-ATACGTATGGCAAGATCGATTACCAGAACAATTTCTATATTT 433 | ||| ||| || |||| |||||| ||||||||||| |||||||||||||||| | Sbjct 403 GACCTTT--CGTCAATCTATACATATGGCCAGATCGATTACAAGAACAATTTCTATATGT 460 Query 434 CCAATGCAAAGGATGTGAGCGGTGATACAAATTCGTTCAACGAGAAGACGAGGGC-TCTC 492 ||| || ||||||||||| || |||| ||| || ||| || |||| | || ||| | || Sbjct 461 ACAACGCGAAGGATGTGAGGGGCGATAAAAAGTCTTTCTACAAGAACATGAAGGCAT-TC 519 Query 493 C-TCTATAAGCTGAAGGAGAAAGCAAGTAGTAAAGAAAACATCCCCAACAAGAAAAATTA 551 | || ||||||| |||| ||||||||||||||| ||||||| ||| || |||| | || Sbjct 520 CTTC-ATAAGCTAAAGGCGAAAGCAAGTAGTAAGGAAAACAAACCCTACGTGAAAGACTA 578 Query 552 CT-TATATGCAACAGGGGA-GGAAAGTCTCGGGAAGATGAAATTGTACGCAATGGTGCAG 609 | | |||||| || || | ||||||||| |||| | ||||||||||||||||||||||| Sbjct 579 -TATGTATGCAGCA-GGAAGGGAAAGTCTTGGGACGGTGAAATTGTACGCAATGGTGCAG 636 Query 610 TGTACACAAGACTTATCAATAAAAAATTGTAGTGTGTGTTTGAACTGGATTCTTG-CGAA 668 ||||| || |||||||| | |||||||| | |||||||||| |||||||| | | |||| Sbjct 637 TGTACGCAGGACTTATCGCTTAAAAATTGCACTGTGTGTTTGGACTGGATTAT-GACGAA 695 Query 669 GTTTCCCAAATGCTGCAACGGTAAACAAGGAGGAAGATTTTTGAGTACAAGTTGTAATTT 728 | ||||| |||||||||| |||||||||||||||||| |||||||| |||| |||||||| Sbjct 696 GCTTCCCGAATGCTGCAATGGTAAACAAGGAGGAAGAGTTTTGAGTCCAAGCTGTAATTT 755 Query 729 TAG 731 ||| Sbjct 756 TAG 758 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 37474673662 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5