BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg319038 Length=654 Score E Sequences producing significant alignments: (Bits) Value AT3G23180.1 | Symbols: | HR-like lesion-inducing protein-relat... 1037 0.0 > AT3G23180.1 | Symbols: | HR-like lesion-inducing protein-related | chr3:8277037-8278396 FORWARD LENGTH=748 Length=748 Score = 1037 bits (561), Expect = 0.0 Identities = 626/657 (95%), Gaps = 6/657 (1%) Strand=Plus/Plus Query 1 ATGGATGTTGTGCAAAGAAAAGTGAACAAATTTGGaaaaaaaGTTGCTTCTTTCCCTCAT 60 |||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||| Sbjct 95 ATGGATGTTGTGCAAAGAAAAGTGAAAAAAATTGGAAGAAAAGTTGCTTCTTTCCCTCAT 154 Query 61 GTTGAAACTATTGGAAGATCTCTCTTTGCCTCCTCCTTCTTCCTCTCTGCTTGGCATGAT 120 |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct 155 GTTGAAACTATTGGAAGAGCTCTCTTTGCCTCCTCCTTCTTCCTCTCTTCTTGGCATGAT 214 Query 121 TATATGGAGCTCAGAGCCAACTGG-ATAGGAACAGAAGATTATTGGAGCCCAAAGTTTGG 179 || |||||||||| |||||||||| || |||||||| ||||||||||||||||||||||| Sbjct 215 TACATGGAGCTCAAAGCCAACTGGAAT-GGAACAGAGGATTATTGGAGCCCAAAGTTTGG 273 Query 180 CTATTCAGGGGACCAGATTAAGTATCTTATGACAGTTAGTATCATAGTGAGAACTCTTGG 239 ||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||| Sbjct 274 CTATTCAGGAGACCAGATTAAGCATCTTATGACAGTTAGTATCATTGTGAGAACTCTTGG 333 Query 240 AGGACTTATCTTCATCTATGGCAGCTTC-TCTGGAGCCTTTCTCTTGCTTATGTACCAAG 298 |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| Sbjct 334 AGGACTTATCTTCATCTATGGCAGCTTCTTC-GGAGCCTTTCTCTTGCTTATGTACCAAG 392 Query 299 GTATTGCTACAATGATTCATCATGATTTCTACAATCATCATATCGACACTGAAGAATTTG 358 | |||||||||||| |||||||||||||||||||||||| | | || ||||||||||||| Sbjct 393 GCATTGCTACAATGGTTCATCATGATTTCTACAATCATCGTTTAGATACTGAAGAATTTG 452 Query 359 GACTGCTCTATCTCAAACTCAAAAGGATTCTGAACGAAACAGTGTCGTACAATACTGCAT 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 453 GACTGCTCTATCTCAAACTCAAAAGGATTCTGAACGAAACAGTGTCGTACAATACTGCAT 512 Query 419 ACAACT-TCTACAAATCAGACTTTGACGAGCAGCAAATAGAGCAAGTCAAATCAAAATTC 477 |||| | |||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct 513 ACAA-TCTCTACAAATCAGACTTTGACGAGCAGCAGATAGAGCAAGTGAAATCAAAATTC 571 Query 478 CGTGAGCTTGCGGATCACGCAATGACAAACCCTGCATTGTTCGGACATAATGAGTTTCTT 537 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 572 CGTGAGCTTGCGGATCACGCGATGACAAACCCTGCATTGTTCGGACATAATGAGTTTCTT 631 Query 538 CGTCGGCTCTTAAGCTTCGTCAAGGGATTGGCCGTAGTAGGAGCATTGCTCTTTTTCTTG 597 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct 632 CGTCGGCTCTTAAGCTTCGTCAAGGGATTGGCCGTAGTAGGAGCATTGCTGTTTTTCGTG 691 Query 598 GATATGAAGCATCGTCTCAACAAAGCCAAGAACCAATCCAAAGTTAAAACTGATTGA 654 ||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct 692 GATATGAAGTATCGTCTCAACAAAGCCAAGAAGCAATCCAAAGTTAAAAATGATTGA 748 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 31597278463 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5