BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg319046
Length=3132
Score E
Sequences producing significant alignments: (Bits) Value
AT3G23270.1 | Symbols: | Regulator of chromosome condensation ... 5042 0.0
AT4G14368.1 | Symbols: | Regulator of chromosome condensation ... 1635 0.0
> AT3G23270.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain | chr3:8316436-8320337
FORWARD LENGTH=3138
Length=3138
Score = 5042 bits (2730), Expect = 0.0
Identities = 3006/3141 (96%), Gaps = 12/3141 (0%)
Strand=Plus/Plus
Query 1 ATGGCAGATCCTGCTAGTTGTTATATCCATCACGAGCGTGACATCGACCAAGCACTTGTC 60
||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct 1 ATGGCAGATCCTGCTAGTTGTTATATCTATCACGAGCGTGACGTCGACCAAGCACTTGTC 60
Query 61 GTACTGAAAAAGGGAACTCAATTACTCAAGTACAGTCGGAAAGGGAAACCTAAATTCCGC 120
||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 61 GTATTGAAAAAGGGAACTCAATTACTCAAGTATAGTCGGAAAGGGAAACCTAAATTCCGC 120
Query 121 GCATTCAGGCTTTCTCCGGATGAAAAAACGTTGATTTGGTTCTCGCGTGGAGAAGAAAAA 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 GCATTCAGGCTTTCTCCGGATGAAAAAACGTTGATTTGGTTCTCGCGTGGAGAAGAAAAA 180
Query 181 GGTTTGAAGTTATTCGAAGTTTCTCGTATCGTCCCGGGACAAAGAACTAGATTTTTACGT 240
|||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||
Sbjct 181 GGTTTGAAGTTATTTGAAGTTTCTCGTATTGTCCCGGGACAAAGAACTAGATTTCTACGT 240
Query 241 CCAGAGAAAGATCACTTATCATTTTCACTTCTATATAACAACAGAGAAAGGTCACTTGAT 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 CCAGAGAAAGATCACTTATCATTTTCACTTCTATATAACAACAGAGAAAGGTCACTTGAT 300
Query 301 CTGATTTGTAAGGACAAAGCAGAGACAGAGGTTTGGTTTGCTGGCCTTAAATTTTTGATT 360
|||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||
Sbjct 301 CTGATTTGTAAGGACAAAGCTGAGACAGAGGTGTGGTTTGCTGCCCTTAAATTTTTGATT 360
Query 361 GAGAAAAGTCGTAATCGACGCGCCAGAAGTGAGATCCCTGAGATACATGACAGTGACACT 420
|| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct 361 GAAAAAAGTCGTAATCGACGCGCCAGAAGTGAAATCCCTGAGATACATGATAGTGACACT 420
Query 421 TTCTCTGTTGGTCGTCAATCTATAGACTTTGTCCCAAACAATATTCCGA-GAGGTAGAAC 479
||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||
Sbjct 421 TTCTCTGTTGGTCGTCAATCTATAGACTTTGTCCCAAGCAATATTCC-ACGAGGTAGAAC 479
Query 480 ATCAATTGACTTAGGCTATCAGAACAATTCAGATGTGGGATATGAACGTGGAAACATGTT 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 480 ATCAATTGACTTAGGCTATCAGAACAATTCAGATGTGGGATATGAACGTGGAAACATGTT 539
Query 540 AAGACCAAGTACGGATGGTTTTCGGATCAGTGTCTCAAGCACACCAAGTTGTTCAAGTGG 599
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 540 AAGACCAAGTACAGATGGTTTTCGGATCAGTGTCTCAAGCACACCAAGTTGTTCAAGTGG 599
Query 600 AGGATCTGGTCCAGATGATATTGAATCATTAGGTGATGTTTACGTTTAGGGTGAAGTTTG 659
|||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 600 AGGATCTGGTCCGGATGATATTGAATCATTAGGTGATGTTTACGTTTGGGGTGAAGTTTG 659
Query 660 GACTGAAGGGATATTACCAGATGGAACTGTTAGCAAAGAAACAGTGAAAACAGATGTACT 719
||||||||||||||||||||| ||||||| |||||| ||||| |||||||||||||||||
Sbjct 660 GACTGAAGGGATATTACCAGACGGAACTGCTAGCAATGAAACTGTGAAAACAGATGTACT 719
Query 720 GACTCCAAGACCTTTGGAATCAAACGTTGTGCTTGATGTTCATCAGATTGTTTGCGGTGT 779
||||||||||||||||||||||| ||||| || |||||||| |||||||||||||||||
Sbjct 720 AACTCCAAGACCTTTGGAATCAAATGTTGTTCTCGATGTTCACCAGATTGTTTGCGGTGT 779
Query 780 AAGGCACGTTGCGCTTGTGACAAGACAAGGAGAGGTTTTCACTTGGGGAGAAGAAGTTGG 839
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 780 AAGGCACGTTGCGCTTGTGACAAGACAAGGAGAGGTTTTTACTTGGGGAGAAGAAGTTGG 839
Query 840 AGGAAGGCTTGGACATGGTATTCAAGTCGATATTAGTCGTCCGAAACTAGTTGAGTTTCT 899
||||||||||||||||||||| ||||| |||||||||||||| ||||| |||||||||||
Sbjct 840 AGGAAGGCTTGGACATGGTATACAAGTAGATATTAGTCGTCCAAAACTCGTTGAGTTTCT 899
Query 900 TGCTCTAACCAACATAGATTTTGTTGCTTGTGGAGAATATCATACTTGTGTTGTTTCTAC 959
|||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||
Sbjct 900 TGCTCTAACCAACATAGACTTTGTTGCATGTGGAGAATATCATACTTGTGTTGTATCTAC 959
Query 960 CTCTGGTGACTTGTTTTCATGGGGAGATGGAATCCATAATGTTGGTCTATTAGGACATGG 1019
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 960 CTCTGGTGACTTGTTTTCATGGGGAGATGGAATCCATAATGTTGGGCTATTAGGACATGG 1019
Query 1020 TAGTGATATTAGCCATTGGATACCTAAAAGAGTCTCTGGTCCTTTAGAAGGTCTTCAAGT 1079
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1020 TAGTGATATAAGCCATTGGATACCTAAAAGAGTCTCTGGTCCTTTAGAAGGTCTTCAAGT 1079
Query 1080 ACTCTCAGTTGCTTGTGGAACATGGCATTCGGCTTTAGCTACTGCGAACGGGAAGCTATT 1139
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1080 ACTCTCAGTTGCTTGTGGAACATGGCATTCAGCTTTAGCTACTGCGAACGGGAAGCTATT 1139
Query 1140 CACGTTTGGTGATGGAGCGTTTGGCGTTTTGGGTCATGGAAACAGAGAAAGTGTTTCGTA 1199
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 1140 CACGTTTGGTGATGGAGCGTTTGGCGTTTTAGGTCATGGAAACAGAGAAAGTGTTTCATA 1199
Query 1200 TCCTAAGGAAGTACAGTCGTTAAACGGTTTGAAAACTGTGAAAGTAGCTTGTAGTATCTG 1259
||||||||||||||| || ||||||||||||||||| |||||||||||||||||||| ||
Sbjct 1200 TCCTAAGGAAGTACAATCATTAAACGGTTTGAAAACGGTGAAAGTAGCTTGTAGTATTTG 1259
Query 1260 GCATACCGCTGCGATTGTCGAGGTTATGGGTCAGACTGGTACGAGTATGTCATCTAGGAA 1319
||||||||| ||||||||||||||||||||||| || | |||||||||||||||||||||
Sbjct 1260 GCATACCGCAGCGATTGTCGAGGTTATGGGTCAAACCGCTACGAGTATGTCATCTAGGAA 1319
Query 1320 GTTGTTTACTTGGGGTGATGGTGACAAAAACAGATTGGGACATGGAAACAAAGAGACTTA 1379
||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 1320 GTTGTTTACTTGGGGTGATGGTGACAAAAACAGGTTGGGACACGGAAACAAAGAGACTTA 1379
Query 1380 CTTGCTTCCAACTTGTGTCTCTTCTCTTATTGACTACAACTTTCATAAGATTGCTTGCGG 1439
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct 1380 CTTGCTTCCAACTTGTGTATCTTCTCTTATTGACTACAACTTTCATAAGATTGCTTGTGG 1439
Query 1440 ACATACATTTACCGTCGCACTCACAACTTCTGGACATGTTTTTACTATGGGTGGTACCGC 1499
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1440 GCATACATTTACCGTCGCACTCACAACTTCTGGACATGTTTTTACTATGGGTGGTACCGC 1499
Query 1500 GCATGGTCAGCTAGGTAACTCAATATCTGATGGTAAATTACCATGCTTGGTGCAAGATCG 1559
||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |
Sbjct 1500 TCATGGTCAGCTAGGTAACTCAATCTCTGATGGTAAATTACCATGCTTGGTTCAAGATAG 1559
Query 1560 ATTGGTTGGAGAATTCGTGGAAGAAATCGCGTGCGGAGATCACCATGTTGCGGTTTTGAC 1619
||| || ||||||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct 1560 ATTAGTCGGAGAATTCGTGGAAGAAATCGCGTGCGGAGCTCACCATGTCGCGGTTTTGAC 1619
Query 1620 ATCTAGAAGTGAAGTCTTCACATGGGGAAAAGGTGCTAATGGAAGATTAGGACATGGAGA 1679
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1620 ATCTAGAAGTGAAGTCTTCACGTGGGGAAAAGGTGCTAATGGAAGATTAGGACATGGAGA 1679
Query 1680 TACAGAGGATAAAAGAACACCAACTTGTG-TTGAAGCCTTGAGAGATAGGCATGTGAAGA 1738
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct 1680 TACAGAGGATAAAAGAACACCAACTT-TGGTTGAAGCCTTGAGAGATAGGCATGTGAAGA 1738
Query 1739 GCTTATCTTGCGGCTCAAACTTTACGTCGAGTATATGTATACATAAATGGGTATCTGGAG 1798
| |||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||
Sbjct 1739 GTTTATCTTGCGGCTCAAACTTTACGTCAAGTATATGTATACATAAGTGGGTATCCGGAG 1798
Query 1799 CAGATCAGTCAATCTGCTCCGGATGTCGTCAAGCATTCGGATTTACTCGGAAGAGGCATA 1858
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1799 CAGATCAGTCAATCTGCTCCGGATGTCGTCAAGCATTCGGATTTACCCGGAAGAGGCATA 1858
Query 1859 ATTGTTATAATTGTGGTTTAGTCCATTGTCATGCTTGTAGCTCAAAGAAAGCTCTAAAAG 1918
| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1859 ACTGTTATAACTGTGGTTTAGTCCATTGTCATGCTTGTAGCTCAAAGAAAGCTTTAAAAG 1918
Query 1919 CAGCATTAGCTCCAACTCCGGGGAAACCACATCGCGTATGCGATGCTTGTTACAGCAAAC 1978
|||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1919 CAGCTTTAGCTCCAACTCCGGGGAAACCACATCGCGTATGTGATGCTTGTTACAGCAAAC 1978
Query 1979 TTAAAGCGGCAGAGTCTGGTTATAGTTCTAATGTAAACAGGAATGTTGCAACTCCAGGAC 2038
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1979 TTAAAGCCGCGGAGTCTGGTTATAGTTCTAATGTAAACAGGAATGTTGCAACTCCAGGAC 2038
Query 2039 GGTCAATAGATGGGTCAGTAAGAAGTGACAAAGAAACAACAAGGTCATCAAAAGTTCTCT 2098
||||||||||||| |||||||||| ||| | |||||||||||||||||| ||||||||||
Sbjct 2039 GGTCAATAGATGGATCAGTAAGAACTGATAGAGAAACAACAAGGTCATCGAAAGTTCTCT 2098
Query 2099 TGTCCGCAAATACAAATTCAGTCAGGTCATCATCAAGGCCTGGACTCACACCTGATTCTT 2158
|||||||||||| ||||||||||| ||||||||||||||||||| |||||||||| ||||
Sbjct 2099 TGTCCGCAAATAAAAATTCAGTCATGTCATCATCAAGGCCTGGATTCACACCTGAGTCTT 2158
Query 2159 CTAATGCTCGTGCCTCGCAAGTTCCATCTCTCCAACAACTTAAAGACATTGCATTCCCGA 2218
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2159 CTAATGCTCGTGCCTCGCAAGTTCCATCTCTCCAACAACTTAAAGACATTGCATTCCCAA 2218
Query 2219 GTTCGCTTAGCGCCATTCAAAATGCTTTCAAACCTGTTATTGCTCCTACTACTACTCCAC 2278
|||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct 2219 GTTCGCTTAGCGCCATTCAAAATGCTTTCAAACCTGTTGTTGCTCCAACTACTACTCCAC 2278
Query 2279 CGCGTCCACTTGTTGTTGGACCATCATCCCCATCACCGCCTCCACCTCCAAGATCATCCT 2338
| ||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2279 CACGTACACTTGTTATTGGACCATCATCTCCATCACCGCCTCCACCTCCAAGATCATCCT 2338
Query 2339 CTCCTTATGCAAGAAGAACGAGCCCTCCACGCACTTCTGGATTTTCAAGAAGCGTTATCG 2398
||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct 2339 CTCCTTATGCAAGAAGACCGAGCCCTCCACGCACTTCTGGATTTTCAAGAAGTGTTATCG 2398
Query 2399 ATAGTTTGAAA-AAGACTAACGAAGTTATGAACCAAGAAATGACAAAACTACAGAGTCAG 2457
||||||| || |||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 2399 ATAGTTT-AAGGAAGACTAACGAAGTTATGAACCAAGAAATGACAAAACTGCATAGTCAG 2457
Query 2458 CAGAGATGTAATAATCAAGGTACAGAGATTGAGAGATTTCAAAAAGCAGCTAAAGACGCT 2517
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2458 CAGAGATGTAATAATCAAGGTACAGAGATTGAAAGATTTCAAAAAGCAGCTAAAGACGCT 2517
Query 2518 TTTGAATTAGCTGCAAAACAATCTTCAAAACATAAAGCAGCAACAGAAGCACTCAAGTCT 2577
| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2518 TCTGAATTAGCTGCAAGACAATCTTCAAAACATAAAGCAGCAACAGAAGCACTCAAGTCT 2577
Query 2578 GTTGCAGAACAGTTAAAAGAACTGAAAGATAAATTACCACCAGAAGTATCAGAGAGTGAA 2637
||||||||||||||||||||| |||| || |||||||| |||||||||||||||||||||
Sbjct 2578 GTTGCAGAACAGTTAAAAGAATTGAAGGAGAAATTACCTCCAGAAGTATCAGAGAGTGAA 2637
Query 2638 GCATTTGAATCCATCAACTCTCAAGCTGAAGCTTATCTAAATGCAAACGAAGCATTAGAA 2697
|||||||||||||| |||||||||||||||||||||||||| |||||| ||| || ||||
Sbjct 2638 GCATTTGAATCCATTAACTCTCAAGCTGAAGCTTATCTAAACGCAAACAAAGTATCAGAA 2697
Query 2698 ACATCTCTACTTACAACTTCAGGACAAGAACAAGAAACATATCAAAAGACAGAGGAACAA 2757
||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2698 ACATCTCCACTTACAACTTCGGGACAAGAACAAGAAACATATCAAAAGACAGAGGAACAA 2757
Query 2758 GTATCTTCTAACTCAAGTATAACCGAGGCATCGAATTCATCAAGACCACCAAGCACAGAA 2817
||| ||||||||||||||||||||||| |||||| ||||||||| ||||||| ||||||
Sbjct 2758 GTACCTTCTAACTCAAGTATAACCGAGACATCGAGTTCATCAAGGGCACCAAGTACAGAA 2817
Query 2818 GCTTCATCATCAAGAACAAGTGGAAAAGAAAGTAAAGAACAGTTTGAGCCTGGTGTTTAT 2877
|||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2818 GCTTCATCATCAAGAATAAGTGGAAAAGAAAGTAAAGAACAATTTGAGCCTGGTGTTTAT 2877
Query 2878 GTTACTTATGAGGTAGACATGAATGGTAACAAGATCTTTCGACGAGTGAGGTTTAGTaaa 2937
|| |||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 2878 GTGACTTATGAGGTAGACATGAATGGTAACAAGATCTTTCGACGAGTTAGATTTAGTAAA 2937
Query 2938 aaaaGATTTGATGAGCATCAAGCAGAAGATTGGTGGACCAAAAACAAAGATAGGTTGCTT 2997
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2938 AAAAGATTTGATGAGCATCAAGCAGAAGATTGGTGGACCAAAAACAAAGATAGGTTGCTT 2997
Query 2998 AAGTGTTATGGTTCAAATTCATCATCATC-T--TCATC---GAATCCAACGGCTTCTGAC 3051
||||||||| ||||||||||||||||||| | ||||| ||||||||||||||| |||
Sbjct 2998 AAGTGTTATAGTTCAAATTCATCATCATCATCATCATCATCGAATCCAACGGCTTCCGAC 3057
Query 3052 TCACCTGTTGCTCCACAACCACCGTCTGATCCGTCAGTACCTGAACAGAGCAACGAGAAG 3111
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 3058 TCACCTGTTGCTCCACAACCACCGTCTGATCCGTCGGTACCTGAACAGAGCAATGAGAAG 3117
Query 3112 GAACCAGATTCTGAAACCTAG 3132
|||||||||||||||||||||
Sbjct 3118 GAACCAGATTCTGAAACCTAG 3138
> AT4G14368.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr4:8274170-8278810 REVERSE LENGTH=3430
Length=3430
Score = 1635 bits (885), Expect = 0.0
Identities = 1889/2353 (80%), Gaps = 152/2353 (6%)
Strand=Plus/Plus
Query 1 ATGGCAGAT-CCTGCTAGTTGTTATATCCATCACGAGCGTGACATCGACCAAGCACT--T 57
||||||||| ||| ||| | ||| || |||| || |||||||||||||||||||| |
Sbjct 16 ATGGCAGATCCCT-CTA---GCTATGTCAATCATGACCGTGACATCGACCAAGCACTCGT 71
Query 58 GTCGTACTGAAAAAGGGAACTCAATTACTCAAGTACAGTCGGAAAGGGAA-ACCTAAATT 116
|| | ||||||| |||||||||||||| ||||| || || ||| |||| ||||||||
Sbjct 72 TTC-T-TTGAAAAAAGGAACTCAATTACTTAAGTATAGCCGCAAA-GGAAGGCCTAAATT 128
Query 117 CCGCGCATTCAGGCTTTCTCCGGATGAAAAAACGTTGATTTGGTTCTCGCGTGGAGAAGA 176
||| ||||||||||||| |||||||||| ||| ||| ||||||| || | ||||||||
Sbjct 129 TCGCTCATTCAGGCTTTCGCCGGATGAAACAACATTGTTTTGGTTATCACACGGAGAAGA 188
Query 177 AAAAGGTTTGAAGTTATTCGA-AGTTTCTCGTA-TCGTCCCGGGACAAAGAA---C---- 227
|||||||||||||||| | | |||||| || | || |||| || ||||||| |
Sbjct 189 AAAAGGTTTGAAGTTA-GCTACAGTTTCACGAATTC-TCCCAGGTCAAAGAACTGCTGTT 246
Query 228 --T---AGATTTTTACGTCCAGAGAAA-GATCACTTATCATTTTCACTTC-TATATAACA 280
| |||| ||||||||| || ||| ||| |||| |||||||| | || ||||| |||
Sbjct 247 TTTCGAAGATATTTACGTCCCGA-AAAGGATTACTTGTCATTTTCTC-TCATATATCACA 304
Query 281 ACAGAGAAAGGTCACTTGATCTGATTTGTAAGGACAAAGCAGAGACAGAGGTTTGGTTTG 340
|| |||| || || |||||||||||||| || |||||||| || ||||||||||||||||
Sbjct 305 ACGGAGATAGATCTCTTGATCTGATTTGCAAAGACAAAGCTGAAACAGAGGTTTGGTTTG 364
Query 341 CTGGCCTTAAATTTTTGATTGAGA-AAAGTCGTAATCGACGC--GCCAGAAGTGAGATCC 397
| || ||||| | ||| ||| ||| ||| ||||| | | || |||| |||||||||||
Sbjct 365 CAGGACTTAAGTCTTTAATT-AGACAAAACCGTAA-C-AAGCAAGCCAAAAGTGAGATCC 421
Query 398 C-----TGAG-ATACATGACAGTGACACTTTCTCTGTTGGTCG----TC-A----ATCTA 442
| |||| |||||||||||||| ||||||| |||||| || | |||||
Sbjct 422 CTGAGGTGAGTATACATGACAGTGATTGTTTCTCTACTGGTCGTCCTTCTACTGCATCTA 481
Query 443 TAGACTTT-GTC-CCAAACAATATTCCGA-GAGGTAGAACATCAATTGACTTAGGCTAT- 498
|||| ||| | | |||||||||| | ||| | || |||||||| ||||| ||||| ||
Sbjct 482 TAGA-TTTCG-CACCAAACAATACT-CGACGTGGAAGAACATCCATTGATTTAGG-AATC 537
Query 499 CAG--------AAC-AA------T---TCAGATGTGGGATATGAACGTGGAAACATGTTA 540
||| ||| || | |||||||||||||||||||||||||||||| ||
Sbjct 538 CAGAACTCTCCAACAAAGTTTGGTAGCTCAGATGTGGGATATGAACGTGGAAACATGCTA 597
Query 541 AGACCAAGTACGGATGGTTTTCGGATCAGTGTCTCAAGCACACCAAGTTGTTCAAGTGGA 600
||||||||||| ||||||||||| || |||||||||||||||||||||||||||| ||||
Sbjct 598 AGACCAAGTACTGATGGTTTTCGAATTAGTGTCTCAAGCACACCAAGTTGTTCAACTGGA 657
Query 601 GGATCTGGTCCAGATGATATTGAATCATTAGGTGATGTTTACGTTTAGGGTGAAGTTTGG 660
|||||||| ||||| || ||||| ||||| |||||||| || | ||| |||||||||
Sbjct 658 ACTTCTGGTCCTGATGACATAGAATCCTTAGGAGATGTTTATGTCTGGGGAGAAGTTTGG 717
Query 661 A-CTGAAGGGATATTACCAGA-TGGAACTGTTAGCAAAGA-AACAGTGAAAACAGATGTA 717
| | || ||||||| |||||| || | || | | | ||| || |||| |||||||
Sbjct 718 AGC-GACGGGATATCACCAGACGGGGTC-GTAAAC-TCCACAACTGTAAAAATAGATGTA 774
Query 718 CTGACTCCAAGACCTTTGGAATCAAACGTTGTGCTTGATGTTCATCAGATTGTTTGCGGT 777
||| ||||| ||| ||||||||||| || || ||||||||||||||||| | |||||||
Sbjct 775 TTGATTCCAAAACCCTTGGAATCAAATGTAGTACTTGATGTTCATCAGATAGCTTGCGGT 834
Query 778 GTAAGGCACGTTGCGCTTGTGACAAGACAAGGAGAGGT-TTTCACTTGGGGAGAAGAAGT 836
|||||||| | || ||||||||||||||||| || || ||| || |||| ||||||||
Sbjct 835 GTAAGGCATATCGCTCTTGTGACAAGACAAGGTGAAGTCTTT-ACATGGGAAGAAGAAGC 893
Query 837 TGGAGGAAGGCTTGGACATGGTATTCAAGTCGATATTAGTCGTCCGAAACTAGTTGAGTT 896
||||||||||||||||||||||||||||||||| || ||||||| ||||| ||||||||
Sbjct 894 TGGAGGAAGGCTTGGACATGGTATTCAAGTCGACGTTTGTCGTCCAAAACTTGTTGAGTT 953
Query 897 TCTTGCTCTAACCAACATAGATTTTGTTGCTTGTGGAGAATATCATACTTGTGTTGTTTC 956
||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct 954 TCTTGCTCTTACCAATATAGATTTTGTTGCTTGTGGAGAATATCATACTTGTGCTGTATC 1013
Query 957 TACCTCTGGTGACTTGTTTTCATGGGGAGATGGAATCCATAATGTTGGTCTATTAGGACA 1016
||| || || || |||||| | |||||||||||||||||||||||||| || || |||||
Sbjct 1014 TACGTCCGGAGATTTGTTTACTTGGGGAGATGGAATCCATAATGTTGGACTTTTGGGACA 1073
Query 1017 TGGTAGTGATATTAGCCATTGGATACCTAAAAGAGTCTCTGGTCCTTTAGAAGGTCTTCA 1076
||| |||||| |||| ||||||||||| |||||||||||||||||| | ||||| |||||
Sbjct 1074 TGGAAGTGATCTTAGTCATTGGATACCGAAAAGAGTCTCTGGTCCTGTGGAAGGACTTCA 1133
Query 1077 AGTACTC-TCAGTTGCTTGTGGAACATGGCATTC-G-GCTTTAGCTACTGCGAACGGGAA 1133
||| || || ||||| ||||| || |||||||| | |||| || ||||| || || ||
Sbjct 1134 AGT-CTTGTCTGTTGCGTGTGGCACGTGGCATTCCGCGCTT--GCGACTGCTAATGGAAA 1190
Query 1134 GCTATTCACGTTTGGTGATGGAGCGTTTGGCGTT-TTGGGTCATGGAAACAGAGAAAGTG 1192
|||||||| |||||||||||||||||||| ||| |||| |||||| | ||||| ||||
Sbjct 1191 ACTATTCACTTTTGGTGATGGAGCGTTTGGTGTTCTTGGA-CATGGAGATAGAGAGAGTG 1249
Query 1193 TTTCGTATCCTAAGGAAGT-ACAGTCGTTAAACGGT-TTGAAAAC-TGTGAAAGTAGCTT 1249
|||| || ||||| ||||| | | | ||| | ||| || ||||| | ||||||||||||
Sbjct 1250 TTTCATACCCTAAAGAAGTGAAAAT-GTTGAGTGGTCTT-AAAACCT-TGAAAGTAGCTT 1306
Query 1250 GTAGTATCTGGCATACCGCT-GCGATTGTCGAGGTTATGGGTCAGACTGGTACGAGTATG 1308
|| | | |||||||| | | || || || || |||||| |||||| ||||| ||||
Sbjct 1307 GTGGCGTGTGGCATACGG-TAGCTATAGTTGAAGTTATGAATCAGACCGGTACTAGTACC 1365
Query 1309 TCATCTAGGAAGTTGTTTACTTGGGGTGATGGTGACAAAAACAGATTGGGACATGGAAAC 1368
|||||||| ||||||||||||||||| |||||||| |||||||| | |||||||||||
Sbjct 1366 TCATCTAGAAAGTTGTTTACTTGGGGCGATGGTGATAAAAACAGGCTAGGACATGGAAAT 1425
Query 1369 AAAGAGACTTA-CTTGCTTCCAACTTGTGTCTCTTCTCTTATTGACTACAACTTTCAT-A 1426
||||||||||| ||| |||||||||||||| ||||| || ||||||||||||||| | |
Sbjct 1426 AAAGAGACTTATCTT-CTTCCAACTTGTGTATCTTCACTAATTGACTACAACTTTAACCA 1484
Query 1427 AGATTGCTTGCGGACATACATTTACCGTCGCACTCACAACTTCTGGACATGTTTTTACTA 1486
| || || || || |||||||| || || || |||||||| || ||||||||||||||||
Sbjct 1485 A-ATCGCGTGTGGTCATACATTCACAGTTGCGCTCACAACCTCAGGACATGTTTTTACTA 1543
Query 1487 TGGGTGGTACCGCGCATGGTCAGCTAGGTAACTC-AATATCTGATGGTAAATTACCATGC 1545
|||| || || | ||||||||||| |||| ||| ||| |||||||||||| | || |||
Sbjct 1544 TGGGAGGGACTTCACATGGTCAGCTTGGTAGCTCGAAT-TCTGATGGTAAACTGCCTTGC 1602
Query 1546 TTGGTGCAAGATCGATTGGTTGGAGAATTCGTGGAAGAAATCGCGTGCGGAGATCACCAT 1605
||||| ||||||||||||||||| |||||||| |||||||| | || || ||||| |||
Sbjct 1603 TTGGTTCAAGATCGATTGGTTGGTGAATTCGTTGAAGAAATATCATGTGGGGATCATCAT 1662
Query 1606 GTTGCGGTTTTGACATCTAGAAGTGAAGTCTTCACATGGGGAAAAGGTGCTAATGGAAGA 1665
||||| || ||||||| |||||||||||||| || |||||||||||| | |||||||||
Sbjct 1663 GTTGCTGTCCTGACATCGAGAAGTGAAGTCTTTACTTGGGGAAAAGGTTCAAATGGAAGA 1722
Query 1666 TTAGGACATGGAGATACAG-AGGATA-AAAGAACACCAAC-TTGTGTTGAAGC-CTTGAG 1721
|||||||||| || | || | ||| ||| ||| ||||| || |||||||| || ||
Sbjct 1723 CTAGGACATGGGGACA-AGGATGATCGAAA-AACGCCAACATTA-GTTGAAGCTCTA-AG 1778
Query 1722 AGATAGGCATGTGAAGAGCT-TATCTTGCGGCTCAAACTTTACGTCGAGTATATGTATAC 1780
|| |||||||||||||| | |||| || || || |||||||| || |||||||| || |
Sbjct 1779 GGAGAGGCATGTGAAGAG-TATATCATGTGGTTCCAACTTTACATCAAGTATATGCATCC 1837
Query 1781 ATAAATGGGTATCTGGAGCAGATCAGTCAATCTGCTCCGGATGTCGTCAAGCATTCGGAT 1840
|||| ||||| || ||||| ||||| || | || || || |||||||||||||| || |
Sbjct 1838 ATAAGTGGGTCTCAGGAGCTGATCAATCTGTTTGTTCTGGTTGTCGTCAAGCATTTGGTT 1897
Query 1841 TTACTCGGAAGAGGCATAATTGTTATAATTGTGGTTTAGTCCATTGTCATGCTTGTAGCT 1900
|||| | |||||||||||||||||||| || |||||||| ||||| ||||| ||||| |
Sbjct 1898 TTACGAGAAAGAGGCATAATTGTTATAACTGCGGTTTAGTGCATTGCCATGCGTGTAGTT 1957
Query 1901 CAAAGAAAGCTCTAAAAGCAGCATTAGCTCCAACTCCGGGGAAACCACATCGCGTATGCG 1960
| ||||||||| | ||||||||||||||||||||||| |||||||||||||| ||||| |
Sbjct 1958 CCAAGAAAGCTTTGAAAGCAGCATTAGCTCCAACTCCAGGGAAACCACATCGAGTATGTG 2017
Query 1961 ATGCTTGTTACAGCAAA-CTTAAAGC-GGCAGAGTCTGGTTATAGTTCTAATGTA---AA 2015
|||||||||||| |||| |||||||| || |||||||||||||| |||||||| ||
Sbjct 2018 ATGCTTGTTACA-CAAAACTTAAAGCTGG-AGAGTCTGGTTATAACTCTAATGTTGCTAA 2075
Query 2016 CAGGAATGTTG-CAACTCC-AGGACGGTCAATAGATGGGTCAGTAAGAAGTGACAAAGAA 2073
|| ||| | ||||||| | ||||||| |||||||| ||| |||| |||| |||
Sbjct 2076 TAGAAAT-TCCACAACTCCTAC-ACGGTCACTAGATGGGACAGGAAGACCAGACAGAGAT 2133
Query 2074 ACAACAAGGTCATCAAA-AGTTCT-CTTGTCCGC-AAATACA-AATTCAGTCAGGTCAT- 2128
| || |||| |||| | |||| || |||| | ||| ||| || |||||| || ||
Sbjct 2134 ATAA---GGTCTTCAAGGA-TTCTACT-GTCCCCCAAA-ACAGAAC-CAGTCAAGT-ATT 2185
Query 2129 CATCAAGGCCT-GGAC-TCAC-ACCTGATTCTTCTAATGCTC-GTGCCTCGCAAGTTCCA 2184
| | | || | || | ||| | |||| ||||||| || || | || || |||||||||
Sbjct 2186 C-TGA-GGT-TAGGTCATCAAGATCTGAATCTTCTATTG-TCAGAGCTTCACAAGTTCCA 2241
Query 2185 TCTCTCCAACAACTTAAAGACATTGCATTCCCGAGTTCGCTTAGCGCCATTCAAAATGC- 2243
||||||| ||||||| ||| |||||||||| || || |||||||| |||||||||||
Sbjct 2242 GCTCTCCAGCAACTTAGAGATGTTGCATTCCCAAGCTCTCTTAGCGCGATTCAAAATGCC 2301
Query 2244 TTTCAAACCTGTT 2256
||| ||||| |||
Sbjct 2302 TTT-AAACCCGTT 2313
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 155768358015
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5