BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg319073 Length=729 Score E Sequences producing significant alignments: (Bits) Value AT3G22040.1 | Symbols: | Domain of unknown function (DUF26) | ... 697 0.0 AT3G22030.1 | Symbols: | Receptor protein kinase-related | chr... 424 8e-118 AT3G22020.1 | Symbols: | Receptor-like protein kinase-related ... 202 4e-51 > AT3G22040.1 | Symbols: | Domain of unknown function (DUF26) | chr3:7761807-7762675 FORWARD LENGTH=774 Length=774 Score = 697 bits (377), Expect = 0.0 Identities = 635/753 (84%), Gaps = 43/753 (6%) Strand=Plus/Plus Query 7 CTCGTTTCTTTCCATATCTTGGCTATACAACTCCTCATACGC-AGCGTTTCATCCCTGAA 65 ||||||||||||||||||||||| ||||||||| |||||| | |||||| |||| ||||| Sbjct 31 CTCGTTTCTTTCCATATCTTGGCCATACAACTCTTCATAC-CTAGCGTTGCATCACTGAA 89 Query 66 TATTACTAATGAGTATCTGAACCACAAATGTCGGGTTGAACAAGGAAAATACCAGCCAGG 125 | |||| |||| ||| || |||||||||| ||||||| ||||| |||||||| || || Sbjct 90 TCTTACAAATGTGTACCTTCACCACAAATGCCGGGTTGGTCAAGGTAAATACCACCCGGG 149 Query 126 AAGTGAG-TACGAGAAAGACCTCAACTCTATCACCGGTAAT-GTCGCTACCGAA-AAATT 182 |||| || |||||||||||| || ||||| ||||| || | |||||| | || || || Sbjct 150 AAGT-AGATACGAGAAAGACTTCGACTCTCTCACCAGT-TTCGTCGCT-GCTAATAAGTT 206 Query 183 TGTAAACGGGTTCGTACACAGCGC-AATTAAAGACGGTACCAATTCCGCTACCGTCATAT 241 | || | ||||||||||||||| | || || |||||| |||||||| ||||| |||||| Sbjct 207 TATAGATGGGTTCGTACACAGCTCTAA-TAGTGACGGTCCCAATTCCACTACCATCATAT 265 Query 242 TCCAATGTCGGGGTGACTCTTACAGGTCCAAGTG-C-AACTCCTGCTATGCCACCGCACT 299 |||| ||||| ||||||||||||| ||| || || | || ||||||||| |||||| || Sbjct 266 TCCAGTGTCGTGGTGACTCTTACAAGTCTAACTGTCGAA--CCTGCTATGACACCGCTCT 323 Query 300 CGCCGGGTTTCGTAAGAGATGTCCAAGAAACAAAGGAGGGATAATATGGTACGATCAATG 359 ||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||| Sbjct 324 GGCCGGGTTTCGTAAGAGATGTCCAAGAAACAAAGGTGGAATAATATGGTACGACCAATG 383 Query 360 TTTTCTCGATATTAGTATGATCAATGAAGGAGCCCCAAGGAA-AGTCAATTACAAGAATA 418 |||||||||| |||||||||||||||| |||||||||||| | ||||||||||| ||| Sbjct 384 TTTTCTCGATGTTAGTATGATCAATGACCTAGCCCCAAGGAAGA-TCAATTACAAGGATA 442 Query 419 CTTTCCCTATGCACAACCCAAACAATGTGAGAGGGGATACAAAGTTGTTTAACAAGAAGA 478 |||| ||||||||||||||||||||||||| |||||||||||| |||| | |||||||| Sbjct 443 CTTTTGCTATGCACAACCCAAACAATGTGAGGGGGGATACAAAGATGTTCAGCAAGAAGA 502 Query 479 CAAATGATTTTTTCCAACAGCTGATTGCGAAAGCTGATAAAGCCGACAAGGATGACATCG 538 |||||||||| ||||||||||||||| ||||||||||||| |||||| ||| | | ||| Sbjct 503 CAAATGATTTCCTCCAACAGCTGATTGTGAAAGCTGATAAACCCGACATGGACGGCGTCG 562 Query 539 AGTTGTTATATTATGCGGCAGGAGAGAAGAGAATCGGGACG-AATAAACTGTATGCAATG 597 ||||||||||||||||||| ||||||| ||||||||||| | || |||||| |||| ||| Sbjct 563 AGTTGTTATATTATGCGGCGGGAGAGATGAGAATCGGGAGGGAA-AAACTGCATGCGATG 621 Query 598 GTGCAGTGT---AA-G---T--C----T-T--GT-TTG---G-AATGGAGTATCA-GCCA 635 ||||||||| || | | | | | || ||| | |||||||| ||| | | Sbjct 622 GTGCAGTGTGCGAAAGACCTAGCGGACTGTAAGTCTTGTTTGGAATGGAGTTTCAAGG-A 680 Query 636 TCTTTCTAAGTGTTGCGACGGTAAACAAGGAGCGAGAGTTTTGGGTACA-GCCTGTAATC 694 ||||||||||| ||||||||||||| |||||||||| ||||||||||| || ||||||| Sbjct 681 GCTTTCTAAGTGCTGCGACGGTAAACGAGGAGCGAGATTTTTGGGTACAAGC-TGTAATC 739 Query 695 TTAGTTATGAGCTATATCCTTTTCTTAGGACTT 727 |||| |||||||||||||||||||||||||||| Sbjct 740 TTAGGTATGAGCTATATCCTTTTCTTAGGACTT 772 > AT3G22030.1 | Symbols: | Receptor protein kinase-related | chr3:7759317-7760738 FORWARD LENGTH=762 Length=762 Score = 424 bits (229), Expect = 8e-118 Identities = 595/761 (78%), Gaps = 67/761 (9%) Strand=Plus/Plus Query 7 CTCGTTTCTTTCCATATCTTGGCTATACAACTCCTCATACGCAGCGTTTCATCCCTGAAT 66 ||||||||||||||||| |||||||||||| |||||||| || | | || ||| ||||| Sbjct 31 CTCGTTTCTTTCCATATATTGGCTATACAAGTCCTCATAAGCTGTGCGTCTTCCTTGAAT 90 Query 67 ATTACTAATGAGTATCTGAACCACAAATGTCGGGTTGAACAAGGAAAATACCAGCCAGGA 126 ||||||||||||||||||||||||||||||| || || |||||||||||||| |||||| Sbjct 91 CTTACTAATGAGTATCTGAACCACAAATGTCGCGT-GATCAAGGAAAATACCAACCAGGA 149 Query 127 AGTGAGTACGAGAAAGACCTCAACTCTATCA-CCGGTA-ATGTCGCTACCGAAAAATTTG 184 ||||||||||||||||| |||||| || ||| ||| || | || |||||| | ||| Sbjct 150 AGTGAGTACGAGAAAGAACTCAACACTCTCAGCCG-TAGA-GTTGCTACCCTTGACTTTA 207 Query 185 TAAACGGGTTCGTACACAGCG--C-AATTAA-AGACGGTACCAATTCCG-CTACCGTCAT 239 | | || ||| ||||| || | ||| | ||| | |||||| || | | ||| |||| Sbjct 208 CAGATGGTTTC--ACACACCGGTCCAAT-AGTAGA-GATACCAAATCTGTC-ACCATCAT 262 Query 240 ATTCCAATGTCGGGGTGACTCTTACAGGTCCAAGTGCAACTCCTGCTATGCCACCGCACT 299 |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| || Sbjct 263 ATTCCAATGTCGCGGTGACTCTTACAGGTCCAAGTGCAACTCCTGCTATGCTACCGCCCT 322 Query 300 CGCCGGGTTTCGTAAGAGATGTCCAAGAAACAAAGGAGGGATAATATGGTACGATCAATG 359 ||||||| || | | || ||||||||||| || ||||||||||| || ||||| Sbjct 323 CGCCGGG----GT--G---T--CCGAGAAACAAAGGTGGAATAATATGGTATGACCAATG 371 Query 360 TTTTCTCGATATTAGTATGATCAATGA-AGGAGCCCCAAGGAAAG-TCAATTACAAGAAT 417 |||||||||| |||||||||| ||||| | ||||||| | | | || ||| | ||| Sbjct 372 TTTTCTCGATGTTAGTATGATTAATGACAATT-CCCCAAG-ACGGATGAACTACGATAAT 429 Query 418 ACTTTCCCTATGCACAACCCAAACAATGTGAGAGGGGATACAAAGTTGTTTAACAAGAAG 477 | ||| ||||||||||||||||||| ||||||||| || ||| | || ||||| ||| Sbjct 430 ATTTTTTCTATGCACAACCCAAACAACGTGAGAGGGAATGTAAACTCATTCAACAAAAAG 489 Query 478 ACAAATGATTTTTTC--CAACAGCTGATTGCGAAA-GCTGATAAAGC-CGACAAGGATGA 533 || | ||| || || ||| | ||||||| |||| ||||||| | | |||| ||| | Sbjct 490 ACGACTGAATTCCTCTACAA-A-CTGATTG-GAAAAGCTGATAGA-CTCGACGTGGACGG 545 Query 534 CATCGAGTTGT-TATATTATGCGGCAGGAGAGAA-GAGAATCGGGACGAATAA-ACTGTA 590 ||| | || | ||||||| |||||||| || || ||| | |||| | | || | ||| Sbjct 546 GATCAACTT-TCTATATTACGCGGCAGGGGA-AATGAGGCTTGGGAAGCA-AACATTGTT 602 Query 591 TGCAATGGTGCA--GTG---------TA---AGTC-T-----T-GTTTGGAATGGAGTAT 629 |||||||||||| ||| || ||| | | |||||||||||||||| Sbjct 603 TGCAATGGTGCAATGTGCGAAGGACATATTGAGTTGTAAGGATTGTTTGGAATGGAGTAT 662 Query 630 CA-GCCATCTTTCTAAGTGTTGCGACGGTAAACAAGGAGCGAGAGTTTTGGGTACAGCCT 688 || | | ||||||||||| || || ||||||||||||||||||||| | |||||| | Sbjct 663 CAAGG-AGCTTTCTAAGTGCTGTGATGGTAAACAAGGAGCGAGAGTTGTAGGTACAATTT 721 Query 689 GTAATCTTAGTTATGAGCTATATCCTTTTCTTAGGACTTAA 729 |||||||||| ||||||||||| |||||||||||||||||| Sbjct 722 GTAATCTTAGGTATGAGCTATACCCTTTTCTTAGGACTTAA 762 > AT3G22020.1 | Symbols: | Receptor-like protein kinase-related family protein | chr3:7756577-7757491 FORWARD LENGTH=624 Length=624 Score = 202 bits (109), Expect = 4e-51 Identities = 296/382 (77%), Gaps = 29/382 (8%) Strand=Plus/Plus Query 239 TATTCCAATGTCGGGGTGACTCTTACAGGTCCA-AGTGCAACTCCTGCTATGCCACCGCA 297 |||||||||| || || ||||| ||| |||| | | ||| || |||||||||||||| Sbjct 164 TATTCCAATGCCGTGGAGACTCCTACGGGTCTATA-TGCGGTTCTTGCTATGCCACCGCT 222 Query 298 CTCGCCGGGTTTCGTAAGAGATGTCCA-AGAAACAAAGGAGGGATAATATGGTACGATCA 356 | |||||| |||||||||||||| || ||| ||||||||| ||||||||||| ||||| Sbjct 223 GTGGCCGGGCTTCGTAAGAGATGT-CAGAGATACAAAGGAGCAATAATATGGTATGATCA 281 Query 357 ATGTTTTCTCGATATTAGTATGAT-CAATGAAGGAGCC-CCAAGGAAAG-TCAATTACAA 413 |||||||||| | | |||| | | | || || || |||| | ||| | ||||| | Sbjct 282 ATGTTTTCTC-A-A--AGTAAG-TACGATCAACTCCCCTCCAACG-AAGATGGATTACGA 335 Query 414 GAATACTTTCCCTATGCACAACCCAAACAATGTGAGA-GGGGATACAAAGTTGTTTAA-C 471 ||||||||| ||||||||||||||||||| | | | |||||||| ||||||| || | Sbjct 336 GAATACTTTTTCTATGCACAACCCAAACAACATCA-ACGGGGATACTCAGTTGTTCAACC 394 Query 472 AAGAAGACAAATG-ATTTTTTCCAACAGCTGATTGC-GAAAGCTGATAAAGCCGACAA-- 527 || |||| || | |||| || | |||| | || |||||| |||||| || | || Sbjct 395 AA-AAGATGAA-GAATTTCCTCTATGAGCT-AGCGCTGAAAGCGGATAAA-CCCA-AAGC 449 Query 528 GGATGACATCGAG-TTGTTATATTATGCGGCAGGAGA-GAAGAGAATCGGGACGAATAAA 585 ||| | | || | ||| ||||||| |||||||| || |||||| |||||| ||||||| Sbjct 450 GGACGGTACCG-GTTTGCTATATTACGCGGCAGG-GACGAAGAGGCTCGGGAAGAATAAA 507 Query 586 CTGTATGCAATGGTGCAGTGTA 607 |||||||||||||||||||||| Sbjct 508 CTGTATGCAATGGTGCAGTGTA 529 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 35364839488 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5