BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg319144
Length=1362
Score E
Sequences producing significant alignments: (Bits) Value
AT3G24540.1 | Symbols: | Protein kinase superfamily protein | ... 1123 0.0
AT3G24550.1 | Symbols: ATPERK1, PERK1 | proline extensin-like r... 1029 0.0
AT3G24400.1 | Symbols: | pseudogene, protein kinase family, co... 676 0.0
AT1G51860.1 | Symbols: | Leucine-rich repeat protein kinase fa... 69.4 8e-11
> AT3G24540.1 | Symbols: | Protein kinase superfamily protein
| chr3:8952903-8955621 FORWARD LENGTH=1530
Length=1530
Score = 1123 bits (608), Expect = 0.0
Identities = 832/941 (88%), Gaps = 12/941 (1%)
Strand=Plus/Plus
Query 218 TAGGCATCTATCAAGGCACTTTCAATTACGAGGAGCTATCTAGAGCCACCAATGGCTTCT 277
|||||||| ||||| ||||||||| ||||| ||||||| |||||||||||||| ||||
Sbjct 479 TAGGCATCCATCAAAGCACTTTCACTTACGGGGAGCTAGCTAGAGCCACCAATAAATTCT 538
Query 278 CTGAGGCCAATTTATTAGGACAAGGTGG-TTTCGGCTACGTTTTTAAAGGTATGTTGCGT 336
||||||||||||| |||||| | ||||| ||| || | ||| | |||||||| ||| |
Sbjct 539 CTGAGGCCAATTTGTTAGGAGAGGGTGGATTT-GGATTCGTATACAAAGGTATATTGAAT 597
Query 337 AATGGAAAAGAAGTTGCTGTAAAACAGTTGAAAGAAGGGAGTTCTCAAGGAGAGAGAGAG 396
|||||||| |||||||| || ||||||||||||| ||||||| |||| || |||| ||||
Sbjct 598 AATGGAAATGAAGTTGCAGTTAAACAGTTGAAAGTAGGGAGTGCTCAGGGTGAGAAAGAG 657
Query 397 TTTCAAGCAGAGGTTGGGATCATTAGCCGAGTTCACCATA-GACATTTGGTGGGACTTGT 455
||||| || |||||| || ||||||| | ||||||||| || ||||||| |||||
Sbjct 658 TTTCAGGCTGAGGTTAATATTATTAGCCAAATTCACCATAGGA-ATTTGGTTTCCCTTGT 716
Query 456 GGGTTATTGCATCGCCGATGCTCAAAGATTGCTTGTCTATGAGTTTGTTCCCAACAACAC 515
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct 717 CGGTTATTGCATCGCTGGTGCTCAAAGATTGCTTGTCTATGAGTTTGTTCCCAACAACAC 776
Query 516 TCTCGAGTTTCACCTCCATGGGAAGGGACGACCTACAATGGAATGGAGTTCAAGATTGAA 575
|||||||||||||||||||||||| ||||| ||||| ||||||||||||| |||||| ||
Sbjct 777 TCTCGAGTTTCACCTCCATGGGAAAGGACGGCCTACGATGGAATGGAGTTTAAGATTAAA 836
Query 576 GATTGCGGTTGGTTCTGCCAAAGGATTGTCTTATCTTCATGAAAATTGCAATCCTAAAAT 635
|||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 837 GATTGCTGTCAGTTCTTCCAAAGGATTGTCTTATCTTCATGAAAATTGCAATCCTAAAAT 896
Query 636 CATCCACCGTGATATCAAGGCGGCAAACATATTGATTGATTTCAAATTTGAAGCTAAGGT 695
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 897 CATCCACCGTGATATCAAGGCGGCAAACATATTGATTGATTTCAAATTTGAAGCAAAGGT 956
Query 696 TGCTGATTTTGGTCTTGCCAAGATTGCTTCGGATACAAACACTCATGTATCTACACGTGT 755
||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 957 TGCTGATTTTGGTCTCGCCAAGATTGCTTTGGATACAAACACTCATGTATCTACACGTGT 1016
Query 756 GATGGGAACTTTTGGGTATTTAGCTCCCGAATATGCTTCAAGCGGAAAACTGACAGAAAA 815
|||||||| ||||||||||| ||||| ||||||||| |||| ||||| || || |||||
Sbjct 1017 TATGGGAACCTTTGGGTATTTGGCTCCGGAATATGCTGCAAGTGGAAAGCTTACTGAAAA 1076
Query 816 ATCTGACGTTTTCTCATTTGGCGTTGTACTTTTGGAGCTAATAACCGGACGTCGCCCTAT 875
||||| |||| |||||| |||||||||||||||||||||||||| |||||||||||| |
Sbjct 1077 GTCTGATGTTTACTCATTCGGCGTTGTACTTTTGGAGCTAATAACGGGACGTCGCCCTGT 1136
Query 876 TGATGCAAACAATGTCCATGCAGATAACAGCTTGGTTGATTGGGCACGACCTTTGCTTA- 934
|||||||||||||||| |||| ||| ||||||||||||||||||||||||| ||||||
Sbjct 1137 TGATGCAAACAATGTCTATGCGGATGACAGCTTGGTTGATTGGGCACGACCATTGCTTGT 1196
Query 935 ACCAAGTATCT-GAA-ATAGGAAACTTTGA-GGCTGTGGTTGATACAAAGTTGAATAATG 991
|| ||| | || ||| | || || |||||| || | ||| ||||| |||| |||||||||
Sbjct 1197 AC-AAGCA-CTTGAAGAAAGTAA-CTTTGAAGGTT-TGGCTGATATAAAGCTGAATAATG 1252
Query 992 AGTATGATCGAGAAGAGATGGCCCGTGTGGTTGCTTGTGCCGCAGCTTGTGTTCGGTCTA 1051
|||||||| ||||||||||||| || ||||||||||||| ||||||||||| || | ||
Sbjct 1253 AGTATGATAGAGAAGAGATGGCTCGCATGGTTGCTTGTGCTGCAGCTTGTGTCCGCTATA 1312
Query 1052 CAGCTCGCCGCAGACCTCGCATGGATCAGGTTGTGCGTGTACTAGAAGGAAACATATCGC 1111
|||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct 1313 CAGCTCGCCGAAGACCTCGCATGGACCAGGTTGTGCGTGTGCTAGAAGGAAACATATCGC 1372
Query 1112 CTTTAGATCTGAACCAAGGGATCACACCAGGTCACAGCAAT 1152
| | ||||||||| |||||||| ||||| ||||||||||||
Sbjct 1373 CGTCAGATCTGAATCAAGGGATAACACCCGGTCACAGCAAT 1413
> AT3G24550.1 | Symbols: ATPERK1, PERK1 | proline extensin-like
receptor kinase 1 | chr3:8960258-8963568 FORWARD LENGTH=2377
Length=2377
Score = 1029 bits (557), Expect = 0.0
Identities = 904/1072 (84%), Gaps = 22/1072 (2%)
Strand=Plus/Plus
Query 187 GTTCTTCCTCCACCATCACCAGGGCTTGCATTAGGCATCTATCAAGGCACTTTCAATTAC 246
||||||||||||||||| |||||||||| |||||| | | | || ||||||||| |||
Sbjct 904 GTTCTTCCTCCACCATCTCCAGGGCTTGTGTTAGGCTTTTCTAAAAGCACTTTCACTTAT 963
Query 247 GAGGAGCTATCTAGAGCCACCAATGGCTTCTCTGAGGCCAATTTATTAGGACAAGG-TGG 305
|||||| | || ||||| || ||||||||||||||||| ||||| ||||||||||| ||
Sbjct 964 GAGGAGTTGTCGAGAGCTACTAATGGCTTCTCTGAGGCTAATTTGTTAGGACAAGGAGGG 1023
Query 306 TTTCGGCTACGTTTTTAAAGGTATGTTGCGTAATGGAAAAGAAGTTGCTGTAAAACAGTT 365
||| || || || ||||||||| |||| || ||| |||||||||||||| ||||||||
Sbjct 1024 TTT-GGTTATGTGCATAAAGGTATATTGCCTAGTGGGAAAGAAGTTGCTGTGAAACAGTT 1082
Query 366 GAAAGAAGGGAGTTCTCAAGGAGAGAGAGAGTTTCAAGCAGAGGTTGGGATCATTAGCCG 425
||||| || ||| ||| ||||||||||||||||| || ||||||| |||||||||| |
Sbjct 1083 GAAAGCTGGTAGTGGTCAGGGAGAGAGAGAGTTTCAGGCTGAGGTTGAGATCATTAGCAG 1142
Query 426 AGTTCACCATAGACATTTGGTGGGACTTGTGGGTTATTGCATCGCCGATGCTCAAAGATT 485
|||||| || || |||||||| ||| | |||||||| || |||| || |||||||||
Sbjct 1143 AGTTCATCACAGGCATTTGGTTTCTCTTATTGGTTATTGTATGGCCGGTGTTCAAAGATT 1202
Query 486 GCTTGTCTATGAGTTTGTTCCCAACAACACTCTCGAGTTTCACCTCCATGGGAAGGGACG 545
|||||||||||||||||||| ||||||| ||| ||||||||||||||||| ||||||||
Sbjct 1203 ACTTGTCTATGAGTTTGTTCCAAACAACAATCTTGAGTTTCACCTCCATGGTAAGGGACG 1262
Query 546 ACCTACAATGGAATGGAGTTCAAGATTGAAGATTGCGGTTGGTTCTGCCAAAGGA-TTGT 604
||||| |||||||||||| | |||||||||||||| |||| ||||| |||||| || |
Sbjct 1263 GCCTACGATGGAATGGAGTACTAGATTGAAGATTGCTCTTGGATCTGCTAAAGGACTT-T 1321
Query 605 CTTATCTTCATGAAAATTGCAATCCTAAAATCATCCACCGTGATATCAAGGCGGCAAACA 664
| |||||||||||| |||||||||| |||||||| ||||||||||| |||||| ||||||
Sbjct 1322 CATATCTTCATGAAGATTGCAATCCGAAAATCATTCACCGTGATATTAAGGCGTCAAACA 1381
Query 665 TATTGATTGATTTCAAATTTGAAGCTAAGGTTGCTGATTTTGGTCTTGCCAAGATTGCTT 724
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1382 TATTGATTGATTTCAAATTTGAAGCTAAGGTTGCTGACTTTGGTCTTGCCAAGATTGCTT 1441
Query 725 CGGATACAAACACTCATGTATCTACACGTGTGATGGGAACTTTTGGGTATTTAGCTCCCG 784
| |||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||| |
Sbjct 1442 CTGATACAAACACTCATGTATCTACACGCGTGATGGGAACCTTTGGGTATTTGGCTCCGG 1501
Query 785 AATATGCTTCAAGCGGAAAACTGACAGAAAAATCTGACGTTTTCTCATTTGGCGTTGTAC 844
|||||||| |||| ||||| || |||||||| ||||||||||||||||||||||||||||
Sbjct 1502 AATATGCTGCAAGTGGAAAGCTCACAGAAAAGTCTGACGTTTTCTCATTTGGCGTTGTAC 1561
Query 845 TTTTGGAGCTAATAACCGG-ACGTCGCCCTATTGATGCAAACAATGTCCATGCAGATAAC 903
||||||| || || || || | | |||||| ||||||| ||||||||| ||| |||| ||
Sbjct 1562 TTTTGGAACTTATTACTGGGAGG-CGCCCTGTTGATGCGAACAATGTCTATGTAGATGAC 1620
Query 904 AGCTTGGTTGATTGGGCACGACCTTTGCTTAACCAAGTATCTGAA-ATAGGAAACTTTGA 962
||||| ||||| ||||||||||| |||||||||| || |||||| | |||| | |||||
Sbjct 1621 AGCTTAGTTGACTGGGCACGACCATTGCTTAACCGAGCATCTGAGGA-AGGAGATTTTGA 1679
Query 963 GGCTGTGGTTGATACAAAGTTGAATAATGAGTATGATC-GAGAAGAGATGGCCCGTGTGG 1021
|| | ||| |||| ||||| || |||||||||||| | |||| |||||||| || |||
Sbjct 1680 GGGTTTGGCTGATTCAAAGATGGGTAATGAGTATGA-CAGAGAGGAGATGGCTCGCATGG 1738
Query 1022 TTGCTTGTGCCGCAGCTTGTGTTCGGTC-TACAGCTCGCCGCAGACCTCGCATGGATC-A 1079
||||||| || || ||||||||||| | | ||||||||||||||||||||||| | | |
Sbjct 1739 TTGCTTGCGCTGCGGCTTGTGTTCGC-CATTCAGCTCGCCGCAGACCTCGCATG-AGCCA 1796
Query 1080 GGTTGTGCGTGTACTAGAAGGAAACATATCGCCT-T-TAGATCTGAACCAAGGGATCACA 1137
| | || || | |||||||||| |||||| | | | ||||| ||| ||||||| | |
Sbjct 1797 GATAGTACGGGCGTTAGAAGGAAATGTATCGC-TGTCT-GATCTTAACGAAGGGATGAGA 1854
Query 1138 CCAGGTCACAGCAATGTTTACGGCTCATCTGGAGGAAGCACGGATTATGACTCGAGCCAA 1197
|| ||||||||||| || ||| |||||| |||||||||||| || |||||| ||||||||
Sbjct 1855 CCGGGTCACAGCAACGTATACAGCTCATATGGAGGAAGCACAGACTATGACACGAGCCAA 1914
Query 1198 GACAGTGAAGGCATGA-ACAGGTTTAGGAAAATGGGACTCGAGA-CTCAAGA 1247
||| || | ||||| | || ||||||||||||| || | || |||||||
Sbjct 1915 TACAACGACGACATGATAAAG-TTTAGGAAAATGGCTCTTG-GAACTCAAGA 1964
> AT3G24400.1 | Symbols: | pseudogene, protein kinase family,
contains Pfam PF00069: Protein kinase domain; blastp match of
72% identity and 1.7e-148 P-value to GP|13397640|emb|CAC34703.1||AX088876
unnamed protein product {Brassica napus} | chr3:8858484-8861822
REVERSE LENGTH=3339
Length=3339
Score = 676 bits (366), Expect = 0.0
Identities = 490/548 (89%), Gaps = 15/548 (3%)
Strand=Plus/Plus
Query 1 ATGTTCTTGTGTTTCTCAGCTGGAGGCCCTTACGGTGGAT-ATCAGCAACAAAATGCATC 59
|||||| || ||||||||| ||||| |||||||||||| | | || ||||||||||||||
Sbjct 1074 ATGTTCATGCGTTTCTCAGATGGAGTCCCTTACGGTGG-TCAGCAACAACAAAATGCATC 1132
Query 60 ACGACAG-TCAAATAACGTGATGGCT-TCACTGCCACCACCG-A-T-GCCAACCTCTGCA 114
||||| | ||| || ||||| | | | ||| ||||||||||| | | || ||||||||
Sbjct 1133 ACGAC-GATCAGATCACGTGGT-GATGTCAGTGCCACCACCGAAGTCTCCCTCCTCTGCA 1190
Query 115 CCACCACGTCTGCCACACTTAATGAGCAGTAGCAGCAGTGGCGGCTACGACTCAAACTAC 174
|||||||||| || || || |||||||| ||||||| || | ||||||||||||||||
Sbjct 1191 CCACCACGTCCACCGCATTTCATGAGCAGCGGCAGCAGCGGAGACTACGACTCAAACTAC 1250
Query 175 TCAGATCAATCAGTTCTTCCTCCACCATCACCAGGGCTTGC---A---TTAGGCATCTAT 228
|| |||||||||||||||||||||||||||||||||||||| | |||||||| |||
Sbjct 1251 TCGGATCAATCAGTTCTTCCTCCACCATCACCAGGGCTTGCATTAGGCTTAGGCATATAT 1310
Query 229 CAAGGCACTTTCAATTACGAGGAGCTATCTAGAGCCACCAATGGCTTCTCTGAGGCCAAT 288
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1311 CAAGGCACTTTCAATTACGAGGAGCTATCTAGAGCCACCAATGGATTCTCTGAGGCCAAT 1370
Query 289 TTATTAGGACAAGGTGGTTTCGGCTACGTTTTTAAAGGTATGTTGCGTAATGGAAAAGAA 348
|| ||||||||||| |||||||| ||||| || ||||||||||| |||||||| ||||||
Sbjct 1371 TTGTTAGGACAAGGCGGTTTCGGATACGTGTTCAAAGGTATGTTACGTAATGGGAAAGAA 1430
Query 349 GTTGCTGTAAAACAGTTGAAAGAAGGGAGTTCTCAAGGAGAGAGAGAGTTTCAAGCAGAG 408
|||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1431 GTTGCTGTGAAACAATTGAAAGAAGGGAGTTCTCAAGGAGAAAGAGAGTTTCAAGCAGAG 1490
Query 409 GTTGGGATCATTAGCCGAGTTCACCATAGACATTTGGTGGGACTTGTGGGTTATTGCATC 468
|||||||||||||||||||| || |||||||||||||| | ||||| ||||||||||||
Sbjct 1491 GTTGGGATCATTAGCCGAGTACATCATAGACATTTGGTTGCTCTTGTCGGTTATTGCATC 1550
Query 469 GCCGATGCTCAAAGATTGCTTGTCTATGAGTTTGTTCCCAACAACACTCTCGAGTTTCAC 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1551 GCCGATGCTCAAAGATTGCTTGTCTATGAGTTTGTTCCCAACAACACTCTCGAGTTTCAC 1610
Query 529 CTCCATGG 536
||||||||
Sbjct 1611 CTCCATGG 1618
Score = 355 bits (192), Expect = 6e-97
Identities = 259/291 (89%), Gaps = 6/291 (2%)
Strand=Plus/Plus
Query 1078 CAGGTTGTGCGTGTACTAGAAGGAAACATATCGCCTTTAGATCTGAACCAAGGGATCACA 1137
||||||| ||||| ||||||||||||||||| || | |||||| |||||||| ||||||
Sbjct 3049 CAGGTTGCACGTGTGCTAGAAGGAAACATATCACCATCAGATCTAAACCAAGGAATCACA 3108
Query 1138 CCAGGTCACAGCAATGTTTACGGCTCATCTGGAGGAAGCACGGATTATGACTCGAGCCAA 1197
|| || ||||||||||| || |||||||||||||||||||| ||||||||||||||||||
Sbjct 3109 CCGGGACACAGCAATGTGTATGGCTCATCTGGAGGAAGCACAGATTATGACTCGAGCCAA 3168
Query 1198 GACAGTGAAGGCATGAACAGGTTTAGGAAAATGGGACTCGAGACTCAAGATTTGTATACT 1257
|||| |||||||||||||| |||||||||| ||||||| |||||||||||||| |||| |
Sbjct 3169 GACAATGAAGGCATGAACAAGTTTAGGAAAGTGGGACTTGAGACTCAAGATTTATATAGT 3228
Query 1258 AATCCAATAAGTGAATATGATTTGTACCCGTCTTGGTCGAGCACTGACGGTCAGACCACA 1317
|| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 3229 AACCCAATTAGTGAATATGATTTGTACCCGTCCTGGTCGAGCACTGACGGTCAGACCACA 3288
Query 1318 C-GTGAAATG-G---G-CAATATTAAAAGACCTGGTCAAGGTTATAGTTAA 1362
| | |||| | | | ||||||||||||||| |||||||||||| |||||
Sbjct 3289 CAGGGAAAGGCGACCGGCAATATTAAAAGACCCGGTCAAGGTTATGGTTAA 3339
Score = 237 bits (128), Expect = 2e-61
Identities = 146/155 (94%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 765 TTTTGGGTATTTAGCTCCCGAATATGCTTCAAGCGGAAAACTGACAGAAAAATCTGACGT 824
|||| ||||||| ||||| ||||||||||||||||||||||| || ||||| ||||||||
Sbjct 2249 TTTTAGGTATTTGGCTCCGGAATATGCTTCAAGCGGAAAACTCACGGAAAAGTCTGACGT 2308
Query 825 TTTCTCATTTGGCGTTGTACTTTTGGAGCTAATAACCGGACGTCGCCCTATTGATGCAAA 884
|||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||
Sbjct 2309 TTTCTCATTTGGCGTTGTACTTCTGGAGCTAATAACTGGACGTCGCCCTATTGATGTAAA 2368
Query 885 CAATGTCCATGCAGATAACAGCTTGGTTGATTGGG 919
|||||||||||||||||||||||||||||||||||
Sbjct 2369 CAATGTCCATGCAGATAACAGCTTGGTTGATTGGG 2403
Score = 222 bits (120), Expect = 6e-57
Identities = 152/167 (91%), Gaps = 4/167 (2%)
Strand=Plus/Plus
Query 918 GGCACGACCTTTGCTTAACCAAGTATCTGAAATAGGAAACTTTGAGGCTGTGGTTGATAC 977
||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct 2502 GGCACGACCTTTGCTTAACCAAGTATCTGAATTAGGAAACTTTGAGGTTGTGGTTGATAA 2561
Query 978 AAAGTTGAATAATGAGTATGATCGA-GAAGAGATGGCCCGTGTGGTTGCTTGTGCCGCAG 1036
||| |||||||||||||||| | | ||||||||||| || ||||||||||||||||||
Sbjct 2562 AAAACTGAATAATGAGTATGA-CAAAGAAGAGATGGCTCGCATGGTTGCTTGTGCCGCAG 2620
Query 1037 CTTGTGTTCGGTCTACAGCTCGC-CGCAGACCTCGCATGGATCAGGT 1082
||||||||||||| ||||||| | || ||||||||||||||||||||
Sbjct 2621 CTTGTGTTCGGTCCACAGCTC-CACGTAGACCTCGCATGGATCAGGT 2666
Score = 145 bits (78), Expect = 1e-33
Identities = 96/104 (92%), Gaps = 4/104 (4%)
Strand=Plus/Plus
Query 538 AAGGGACGACCTACAATGGAATGGAGTTCAAGATTGAAGATTGCGGTTGGTTCTGCCAAA 597
|||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1712 AAGGGACGGCCTACGATGGAATGGAGTTCAAGATTGAAGATTGCTGTTGGTTCTGCCAAA 1771
Query 598 GGATTGTCTTATCTTCATGAAAATTGCAA-TCCTA-AA-ATCAT 638
|||||||||||||||||||||||||| || || || || |||||
Sbjct 1772 GGATTGTCTTATCTTCATGAAAATTGTAAGTC-TATAAGATCAT 1814
Score = 141 bits (76), Expect = 2e-32
Identities = 80/82 (98%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 692 AGGTTGCTGATTTTGGTCTTGCCAAGATTGCTTCGGATACAAACACTCATGTATCTACAC 751
|||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 2079 AGGTTGCTGATTTTGGTCTTGCCAAGATTGCTTCTGATACAAATACTCATGTATCTACAC 2138
Query 752 GTGTGATGGGAACTTTTGGGTA 773
||||||||||||||||||||||
Sbjct 2139 GTGTGATGGGAACTTTTGGGTA 2160
> AT1G51860.1 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr1:19257634-19261479 REVERSE LENGTH=2673
Length=2673
Score = 69.4 bits (37), Expect = 8e-11
Identities = 37/37 (100%), Gaps = 0/37 (0%)
Strand=Plus/Plus
Query 425 GAGTTCACCATAGACATTTGGTGGGACTTGTGGGTTA 461
|||||||||||||||||||||||||||||||||||||
Sbjct 1898 GAGTTCACCATAGACATTTGGTGGGACTTGTGGGTTA 1934
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 67067928120
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5