BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg319167
Length=1575
Score E
Sequences producing significant alignments: (Bits) Value
AT3G24620.1 | Symbols: ATROPGEF8, ROPGEF8 | RHO guanyl-nucleoti... 2536 0.0
AT4G13240.1 | Symbols: ATROPGEF9, ROPGEF9 | RHO guanyl-nucleoti... 1164 0.0
AT1G79860.1 | Symbols: ATROPGEF12, ROPGEF12, MEE64 | RHO guanyl... 180 4e-44
> AT3G24620.1 | Symbols: ATROPGEF8, ROPGEF8 | RHO guanyl-nucleotide
exchange factor 8 | chr3:8980695-8982793 REVERSE LENGTH=1572
Length=1572
Score = 2536 bits (1373), Expect = 0.0
Identities = 1507/1573 (96%), Gaps = 3/1573 (0%)
Strand=Plus/Plus
Query 1 ATGGTTGCAGCGTTGGAACGAAGACTAAGCGCTTCCAAATCATTCAACTTTAAAAGTATG 60
||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct 1 ATGGTTGCAGCGTTGGAACGAGGACTAAGCGCTTCCAAATCATTCAACTTTAAAAGAATG 60
Query 61 TTTGATTCATCTTCGACGAAACAACAACAATCTCAAACCATTGTCGTGGAGAACGGAGAT 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 61 TTTGATTCATCTTCGACGAAACAACAACAATCTCAAACTATTGTCGTGGAGAACGGAGAT 120
Query 121 TCTCATATTGTGGAATCCAACACGCCTGAAAGCCAAAACTCCGACAGCTTCGTAGAAAGC 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 TCTCATATTGTCGAATCCAACACGCCTGAAAGCCAAAACTCCGACAGCTTCGTAGAAAGC 180
Query 181 CCCGTAGAGAGCAGCCTTCCAATAATTTCCCCTCTTACTCGGCCAGGAAAAAGATCCGAC 240
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 181 CCCGTAGAGAGCAGCCTTCCAATGATTTCCCCTCTTACTCGGCCAGGAAAAAGATCTGAG 240
Query 241 AGACAACAAGCAGATATGGAGATGATGAAAGACAGGTTCGCGAAATTACTTCTTGGAGAA 300
||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 241 AGACAACAAGCAGATATGGAGATGATGAAAGACAGGTTCGCTAAATTGCTTCTTGGAGAA 300
Query 301 GATATGTCCGGTGGCGGGAAAGGTGTATCTTCTGCTCTGGCCCTTTCCAATGCTATCACA 360
|||||||||||||| |||||||| ||||||||||||||||| ||||||||||| ||||||
Sbjct 301 GATATGTCCGGTGGTGGGAAAGGCGTATCTTCTGCTCTGGCTCTTTCCAATGCCATCACA 360
Query 361 AATCTTGCTGCGTCTATATTCGGGGAACAAACAAAGCTACAGCCGATGCCGCAAGATAGA 420
||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct 361 AATCTTGCTGCGTCTATATTCGGAGAACAAACAAAGCTACAACCGATGCCGCAAGATAGA 420
Query 421 CAAGTGAGGTGGAAGAAAGAGATCGATTGGTTATTGTCTGTGACCGATCACATTGTCGAG 480
|||| ||| |||||||||||||| ||||||||||| || |||||||||||||||||||||
Sbjct 421 CAAGCGAGATGGAAGAAAGAGATTGATTGGTTATTATCCGTGACCGATCACATTGTCGAG 480
Query 481 TTTGTTCCTTCTCAACAAACGAGCAAAGAAGGAGTTTGCACTGAGATTATGGTGACAAGA 540
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 481 TTTGTTCCTTCTCAACAAACAAGCAAAGATGGAGTTTGCACTGAGATTATGGTGACAAGA 540
Query 541 CAAAGAGGTGATCTTCTTATGAACATTCCAGCTCTTCGAAAACTCGACGCCATGCTCATC 600
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 541 CAAAGAGGTGATCTTCTTATGAACATTCCAGCTCTTCGAAAACTTGACGCCATGCTCATC 600
Query 601 GATACATTGGACAATTTCAGAGGACACAACGAGTTTTGGTATGTCTCTAGAGATTCAGAA 660
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 601 GATACATTGGACAATTTCAGAGGACACAACGAGTTTTGGTATGTCTCAAGAGATTCAGAA 660
Query 661 GAAGGGCAGCAGGCGAGGAATGATCGGACAAACGACAAATGGTGGCTACCTCCGGTTAAA 720
||||||||||| || ||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 661 GAAGGGCAGCAAGCAAGGAATGATCGGACAAACGACAAGTGGTGGCTACCACCGGTTAAA 720
Query 721 GTTCCTCCCGGAGGTTTATCTGAACCAGCTCGGAGAATGCTTTACTTCCAAAAAGATTCA 780
|||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct 721 GTTCCTCCTGGAGGTTTATCAGAACCATCTCGGAGAATGCTTTACTTCCAAAAAGATTCA 780
Query 781 GTCACACAGGTTCAAAAAGCTGCAATGGCTATCAATGCTCAAGTCCTTTCAGAAATGGCA 840
|||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||| |
Sbjct 781 GTCACACAAGTTCAAAAAGCTGCAATGGCCATCAATGCTCAAGTCCTCTCAGAAATGGAA 840
Query 841 ATACCTGAGAGCTACATCGACTCTCTCCCTAAGAACGGAAGAGCCAGCCTCGGGGATTCG 900
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 841 ATACCTGAGAGCTACATCGACTCTCTCCCAAAGAACGGAAGAGCCAGCCTCGGGGATTCG 900
Query 901 ATCTACAAGAGCATAACAGAGGAGTGGTTTGATCCGGAGCAGTTCTTATCGATGTTGGAC 960
|| |||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||
Sbjct 901 ATATACAAGAGCATAACAGAGGAATGGTTTGATCCTGAGCAGTTCTTAGCGATGTTGGAC 960
Query 961 TTGTCGACAGAACACAAAGTGTTGGATTTGAAGAATAGGATTGAGGCATCTGTAGTGATT 1020
|||||||||| ||||||||||||||||||||||| || |||||||||||||| ||||||
Sbjct 961 ATGTCGACAGAGCACAAAGTGTTGGATTTGAAGAACAGAATTGAGGCATCTGTTGTGATT 1020
Query 1021 TGGAAGAGGAAGCTTCACACAAAGGACACCAAATCTTCTTGGGGCTCAGCAGTTAGCTTG 1080
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1021 TGGAAGAGGAAGCTTCACACAAAGGACACCAAATCTTCGTGGGGCTCAGCAGTTAGCTTG 1080
Query 1081 GAGAAGAGAGAATTGTTCGAAGAGAGAGCAGAAACAATCTTAGTCTTGCTTAAACAAAAA 1140
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct 1081 GAGAAGAGAGAATTGTTCGAAGAGAGAGCAGAAACAATCTTGGTCTTGCTCAAACAAAAA 1140
Query 1141 TTTCCCGGTCTTCCTCAATCTTCCCTTGACATATCCAAGATTCAGTTTAACAAGGACGTT 1200
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1141 TTTCCCGGTCTTCCTCAATCTTCCCTTGACATCTCCAAGATTCAGTTTAACAAGGACGTT 1200
Query 1201 GGGCAAGCGGTGTTGGAGAGTTACTCTAGGATACTTGAGAGCTTGGCTTATACAGTGATG 1260
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct 1201 GGGCAAGCGGTGTTGGAAAGTTACTCTAGGATACTTGAGAGCTTGGCTTACACAGTGATG 1260
Query 1261 TCAAGAATAGAAGATGTTCTTTACACAGATTCATTGGCACTAAAGCAAACTTTATTGGCT 1320
||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1261 TCAAGGATAGAAGATGTTCTTTACACAGATACATTGGCACTAAAGCAAACTTTATTGGCT 1320
Query 1321 GAAGAAACATCAGATGGTGGGAGAACAACCGAGACGGATTCCGAGTCAGCGGGATCTTCT 1380
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1321 GAAGAAACATCAGATGGTGGGAGAACAACAGAGACGGATTCCGAGTCAGCGGGATCTTCT 1380
Query 1381 AACTCGGGAGAAGAAACCGAGAAGCTTGACCCACACTACTCCAAGACCTTGTTGGATTTT 1440
||||||||||||||| ||||||||| ||||||||||| | | ||||||||||||||||||
Sbjct 1381 AACTCGGGAGAAGAAGCCGAGAAGCATGACCCACACT-C-C-AAGACCTTGTTGGATTTT 1437
Query 1441 ATGGGTTGGAATGATAATAGTTCGAAAGGCGGCGATAAACCTACTAAATCTCCAAACATT 1500
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||
Sbjct 1438 ATGGGTTGGAATGATAATAGTTCCAAAGGAGGCGATAAACCTACTAAATCTCCAAACCTT 1497
Query 1501 ACGCCGAAAAAGCTCTCTTACTTGGAGAAGTTAGAGAATTTGAACGGTTTTAGAAGTCCG 1560
||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 1498 ACGCCGAAAAAGCTCTCATACTTGGAGAAGTTAGAGAATTTAAACGGTTTTAGAAGTCCC 1557
Query 1561 AAAGATAGACATT 1573
|||||||| ||||
Sbjct 1558 AAAGATAGGCATT 1570
> AT4G13240.1 | Symbols: ATROPGEF9, ROPGEF9 | RHO guanyl-nucleotide
exchange factor 9 | chr4:7680153-7682622 FORWARD LENGTH=1762
Length=1762
Score = 1164 bits (630), Expect = 0.0
Identities = 1125/1361 (83%), Gaps = 46/1361 (3%)
Strand=Plus/Plus
Query 244 CAACAAGCAGATATGGAGATGATGAAAGACAGGTTCGCGAAATTACTTCTTGGAGAAGAT 303
|||||| | || | ||||||||||||||| || ||| |||||||||||||||||||||||
Sbjct 211 CAACAATCCGAGACGGAGATGATGAAAGATAGATTCACGAAATTACTTCTTGGAGAAGAT 270
Query 304 ATGTCCGGTGGCGGGAAAGGTGTATCTTCTGCTCTGGCCCTTTCCAATGCTATCACAAAT 363
||||| ||||| || |||||||||||||||||| |||| || || ||||| ||||| |||
Sbjct 271 ATGTCTGGTGGTGGTAAAGGTGTATCTTCTGCTTTGGCACTATCAAATGCCATCACGAAT 330
Query 364 CTTGCTGCGTCTATATTCGGGGAACAAACAAAGCTACAGCCGATGCCGCAAGATAGACAA 423
|| || ||||| |||||||||||||| |||||| | ||||||||| | | ||||||| |
Sbjct 331 CTAGCCGCGTCAATATTCGGGGAACAGACAAAGTTGCAGCCGATGGCACCGGATAGACGA 390
Query 424 GTGAGGTGGAAGAAAGAGATCGATTGGTTATTGTCTGTGACCGATCACATTGTCGAGTTT 483
| ||||||||||||||||||||||||||| ||||| ||||| |||||||| |||||||||
Sbjct 391 GCGAGGTGGAAGAAAGAGATCGATTGGTTGTTGTCCGTGACTGATCACATCGTCGAGTTT 450
Query 484 GTTCCTTCTCAACAAACGAGCAAAGAAGGAGTTTGCACTGAGATTATGGTGACAAGACAA 543
||||| |||||||| | || || |||||||| ||||| |||||||||||||||||||||
Sbjct 451 GTTCCATCTCAACAGATTAGTAAGGAAGGAGTCTGCACCGAGATTATGGTGACAAGACAA 510
Query 544 AGAGGTGATCTTCTTATGAACATTCCAGCTCTTCGAAAACTCGACGCCATGCTCATCGAT 603
||||||||||| || |||||||| || || ||||| |||||||||||||||||||| |||
Sbjct 511 AGAGGTGATCTCCTCATGAACATCCCTGCCCTTCGCAAACTCGACGCCATGCTCATTGAT 570
Query 604 ACATTGGACAATTTCAGAGGACACAACGAGTTTTGGTATGTCTCTAGAGATTCAGAAGAA 663
|||||||||||||| ||||||||||| |||||||||||||| || |||||||||||||||
Sbjct 571 ACATTGGACAATTTTAGAGGACACAATGAGTTTTGGTATGTATCGAGAGATTCAGAAGAA 630
Query 664 GGGCAGCAGGCGA-GGAATGATCGGACAAACGACAAATGGTGGCTACCTCCGGTTAAAGT 722
||| | || || | ||||||| ||||||| ||||| |||||||| ||||||||||||||
Sbjct 631 GGGAAACAAGC-ACGGAATGAGAGGACAAAGGACAAGTGGTGGCTTCCTCCGGTTAAAGT 689
Query 723 TCCTCCCGGA-GGTTTATCTGAACCAGCTCGGAGAATGCTTTACTTCCAAAAAGATTCAG 781
||||| | || || || ||| |||| || ||||||||| | || |||||||||||||
Sbjct 690 CCCTCCTA-ATGGCTTGTCCGAATCAGCCCGAAGAATGCTTCATTTTCAAAAAGATTCAG 748
Query 782 TCACACAGGTTCAAAAAGCTGCAATGGCTATCAATGCTCAAGTCCTTTCAGAAATGGCAA 841
|| |||| || |||||||| || |||||||| || || ||||| || ||||||||||| |
Sbjct 749 TCTCACAAGTCCAAAAAGCCGCCATGGCTATTAACGCGCAAGTTCTGTCAGAAATGGCTA 808
Query 842 TACCTGAGAGCTACATCGACTCTCTCCCTAAGAACGGAAGAGCCAGCCTCGGGGATTCGA 901
| ||||| ||||| ||||| ||||| || ||||| ||||||| ||||| |||||||||
Sbjct 809 TCCCTGATAGCTATATCGAGTCTCTTCCAAAGAATGGAAGAGTAAGCCTTGGGGATTCGT 868
Query 902 TCTACAAGAGCATAACAGAGGAGTGGTTTGATCCGGAGCAGTTCTTATCGATG-TTGGAC 960
| ||||||||||||||||| |||||||||||||| ||||||||||| || | ||| ||
Sbjct 869 TATACAAGAGCATAACAGAAGAGTGGTTTGATCCAGAGCAGTTCTTGTCAACACTTG-AC 927
Query 961 TTGTCGACAGAACACAAAGTGTTGGATTTGAAGAATAGGATTGAGGCATCTGTAGTGATT 1020
|| || ||||| ||||||||||||||| ||||||||||||||||||| || | || ||
Sbjct 928 TTATCTACAGAGCACAAAGTGTTGGATGTGAAGAATAGGATTGAGGCCTCAATCGTTATA 987
Query 1021 TGGAAGAGGAAGCTTCA-C-ACAAAGGACACCAAATCTTCTTGGGGCTCAGCAGTTAGCT 1078
||||| || || ||||| | | |||| ||| ||||||||||||||| ||||| || ||||
Sbjct 988 TGGAAAAGAAAACTTCATCTA-AAAG-ACAACAAATCTTCTTGGGGATCAGCTGTGAGCT 1045
Query 1079 TGGAGAAGA-GAGAATTGTTCGAAGAGAGAGCAGAAACAATCTTAGTCTTGCTTAAACAA 1137
||||||| | |||| ||||||||||||||||| || || ||||| |||||||||||||||
Sbjct 1046 TGGAGAA-ACGAGAGTTGTTCGAAGAGAGAGCCGAGACGATCTTGGTCTTGCTTAAACAA 1104
Query 1138 AAATTTCCC-GGTCTTCCTCAATCTTCCCTTGACATATCCAAGATTCAGTTTAACAAGGA 1196
|| || ||| |||||||| ||||||||||||||||| ||||| ||||||| |||||||||
Sbjct 1105 AAGTT-CCCTGGTCTTCCCCAATCTTCCCTTGACATTTCCAAAATTCAGTATAACAAGGA 1163
Query 1197 CGTTGGG-CAAGCGGTGTTGGAGAGTTACTCTAGGATACTT-GAGAGCTT-GGCTTATAC 1253
|| ||| || ||||| |||||||| ||||| |||||| || |||||||| || | | ||
Sbjct 1164 TGT-GGGACATGCGGTTTTGGAGAGCTACTCAAGGATA-TTAGAGAGCTTAGGGT-ACAC 1220
Query 1254 AGTGATGTCAAGAATAGAAGATGTTCTTTACACAGATTCATTGGCACTAAAGCAAACTTT 1313
| ||||| ||||| || ||||| ||||| | ||||| || || | |||||| |
Sbjct 1221 GGAAATGTCGAGAATCGACGATGTACTTTATGCGGATTCTTTAGCCCGGAAGCAA--TGC 1278
Query 1314 ATTGGCTGAAGAAACATCAGATGGTGGGAGAA---CAACCGAGACGGATTCCGAGTCAGC 1370
| || ||||||||||||||||||||||| || |||| || ||||| || | ||| ||
Sbjct 1279 ACAGG-TGAAGAAACATCAGATGGTGGGAAAATAGCAACGGAAACGGACTCAGCGTCTGC 1337
Query 1371 GGGATCTTCTAACT-CG--GGAGAAGAAACCGAGAAGCTTGACCCACACTACTC--CAA- 1424
|||||||| |||| | ||||| |||| ||||||||||| |||| |||| |||
Sbjct 1338 TGGATCTTCGAACTACTCAGGAGAGGAAATAGAGAAGCTTGAATCACAAAACTCATCAAA 1397
Query 1425 GAC--C-TTG-TTGGATTTTATGGGTTGGAATGATAATAGTTCGAAAGG-CGG-C-GATA 1477
||| | ||| ||| ||||||| ||||||| ||| |||||||| ||||| | | | || |
Sbjct 1398 GACGACATTGCTTG-ATTTTATTGGTTGGAGTGACAATAGTTCAAAAGGGCAGTCAGAGA 1456
Query 1478 AACCTACTAAATCTCCAA-ACATTACGCCGAA-AAAGCTCTCTTACTTGGAGAAG-TTAG 1534
||||| | |||||||| | | || ||||| || ||| ||||| || ||||||||| || |
Sbjct 1457 AACCTCCAAAATCTCCGAGA-ATGACGCCAAAGAAA-CTCTCATATTTGGAGAAGCTT-G 1513
Query 1535 AGAATTTGAACGGTTTTAGAAGTCCGAAAGATAGACATTGA 1575
|||| || || |||||||| || || |||||||| ||||||
Sbjct 1514 AGAACTTAAATGGTTTTAGGAGCCCTAAAGATAGGCATTGA 1554
> AT1G79860.1 | Symbols: ATROPGEF12, ROPGEF12, MEE64 | RHO guanyl-nucleotide
exchange factor 12 | chr1:30042092-30044175 REVERSE
LENGTH=1711
Length=1711
Score = 180 bits (97), Expect = 4e-44
Identities = 770/1080 (71%), Gaps = 105/1080 (10%)
Strand=Plus/Plus
Query 250 GCAGATATGGAG-ATGATGAAAGA-CAGGTTCGCGAAATTACTT-CTTGGAGAAGA-TAT 305
||||| |||||| | ||||||||| | | ||| | || | || || ||||| || ||
Sbjct 354 GCAGACATGGAGCA-GATGAAAGAGC-GCTTCTCCAAGCT-GTTGCTGGGAGAGGACAAT 410
Query 306 GTCCGGTGGCGGGAAAGGTGTATCTTCTGCTCTGGCCCTTTCCAATGCTATCACAAATCT 365
|||||||| || ||||| ||||| |||||||| |||||||| || || |||||||| ||
Sbjct 411 -TCCGGTGGAGGCAAAGGAGTATCCTCTGCTCTCGCCCTTTCAAACGCAATCACAAACCT 469
Query 366 TGCTGCGTCTATATTCGGGGAACAAACAAAGC-TACAGCCGATGCC-GCAAGATAGACA- 422
||| || || | ||||| || | ||| || | |||| ||||| || ||| ||| |
Sbjct 470 TGCAGCTTCCGTGTTCGGAGAGC-AACGGCGCTTGGAGCCAATGCCTGC-AGAAAGA-AG 526
Query 423 AGTGAGGTGGAAG-AAAGAGATCGATTGG-TTATTGTCTGTGACCGATCACATTGTCGAG 480
|| || ||| || |||||||| |||||| || | || ||||||||| || | || |||
Sbjct 527 AGCAAGATGG-AGAAAAGAGATTGATTGGCTT-CTCTCCGTGACCGATTACGTGGTTGAG 584
Query 481 TTTGTTCCTTCTCAACA-AACGAGCAAAGA-AGGAGTTTGCACT-GAGATTATGGTGACA 537
|||| ||| ||||| || || | ||||| ||| | | ||||| ||| |||
Sbjct 585 TTTGCTCCATCTCAGCAGAA-AAATAAAGATGGGA-CCAATA-TGGAGATAATGACCACA 641
Query 538 AGACAAAG-AGGTGATCTTCTTATGAACATTCCAGCTCTTCG-A-AAACTCGACGCCATG 594
| ||| | | ||| || | ||||| || || || || | | ||||| |||||||||
Sbjct 642 CGCCAACGTA-CTGACCTCCACATGAATATCCCCGC-ATT-GAAGAAACTGGACGCCATG 698
Query 595 CTCATCGATACAT-TGGACAATTTCAGAGGA-CACAA-CGAGTTTTGGTATGTCTCTAGA 651
||||||||| | | || ||||||| |||| || || |||||| | ||| |||| | |
Sbjct 699 CTCATCGAT-TGTCTAGAAAATTTCA-AGGACCA-AAGCGAGTTCAGCTATATCTCAAAA 755
Query 652 GATTCAGAAGAAGGGCAGCAGGCGAGGAATGATCGGACAA--ACGACAAATGGTGGCTAC 709
|| || | | | || || | || || || || |||| ||||||||| | |
Sbjct 756 GACTCCCCTG-A---C-TTAGACG-GTAA-GA---GA-AACGACGAAAAATGGTGGATTC 804
Query 710 C-TCCGGTTAAAGTTCCTCCCGGA-GGTTTATCTGAACCAGC-TCGGAGAATG-CTTT-- 763
| || || |||||||| || || ||| |||| | | ||| || |||| | |||
Sbjct 805 CGACC-GTCAAAGTTCC-ACCAGATGGTCTATCAG-A--AGCTTC-AAGAAGGTTTTTGC 858
Query 764 ACTTCCAAAAAGATTCAGTCACA-CAGGTTCAAAAAGCTGCAATGGCTATCAATGCTCAA 822
| | ||| ||||||| || | | ||||||| ||| || || ||||| || || || ||
Sbjct 859 AGTACCAGAAAGATTGTGT-AAACCAGGTTCTAAAGGCAGCCATGGCCATAAACGCACAG 917
Query 823 GTCCT-TTCAGAAATGGCA-ATACCTGAGAGCTACATCGACTCTCTCCCTAAGAACGGAA 880
|| | ||| || |||| | ||||||||||||||||||||||||||||| |||||||| |
Sbjct 918 GTTTTGTTC-GAGATGG-AGATACCTGAGAGCTACATCGACTCTCTCCCAAAGAACGGGA 975
Query 881 GAGCCAGCCTCGGGGATTC-GATCTACAAGAGCATAACAGAGGAGTGGTTTGATCCGGAG 939
| || || ||||||||| | ||| ||||||| ||||| | ||| | ||||| |||||
Sbjct 976 GGGCGAGTCTCGGGGAT-CAGATGTACAAGAATATAACGGTGGACTTCTTTGACCCGGAC 1034
Query 940 CAGTTCTT-ATCGATGT-TGGACTTGTCGACAGAACACAA-AGT-GTTGGATTTGAAGAA 995
|||||| | | | | | ||||| ||||| | || ||||| | | || ||| | || ||
Sbjct 1035 CAGTTCCTGAGC-A-GCATGGACATGTCGTCGGAGCACAAGA-TCGT-GGACCTCAAAAA 1090
Query 996 TAGGATTGAGGCATCTGT-AGTGATTTGGAAGAGG-AA---GCTTCACACAAAGGACACC 1050
|| || |||||||| | | | || ||||| | | || | || | | || | ||| |
Sbjct 1091 CAGAATCGAGGCATCAATCATT-ATATGGAA-ACGCAAAATGGTTTATA-AA-G-ACAAC 1145
Query 1051 AAATCTTCT------TGGGGCTCAGCAGTTAG-CTTGGAGAAGAGAGAATTGTTCGAAGA 1103
||||| || |||| ||| | ||| || || ||||||| |||| | ||||||||
Sbjct 1146 AAATCATCGGCACCCTGGGCCTCCGGAGTAAGTCT-GGAGAAGCGAGAGGTCTTCGAAGA 1204
Query 1104 GAGAGCAGAAACAATCTTAG-TC-TTGCTTAAACAAAAATTTCCCGGTCTTCCTCAATCT 1161
| |||| || || || || | || || || || |||| || ||||| || ||||||||
Sbjct 1205 GCGAGCTGAGACCATTTT-GCTCATT-CTCAAGCAAAGATACCCCGGGATTTCTCAATCT 1262
Query 1162 TCCCTTGACAT-ATCCAAGATTCAGTTTAACAAGGACGTTGGGCAAG-CGGTGTTGGAGA 1219
|| || ||||| | | || || ||||| ||| ||||||| |||| || ||||| ||||||
Sbjct 1263 TCACTCGACATCAGCAAA-ATCCAGTTCAACGAGGACGT-GGGCCAGGCGGTGCTGGAGA 1320
Query 1220 GTTACTCTAGGATACTTGAGAGCTTGGCTTATACAGTGA-TGTCAAGAATAGAAGATGTT 1278
| ||||| || ||||| || |||||||| || || || | | || ||||| || || |||
Sbjct 1321 GCTACTCGAGAATACTGGAAAGCTTGGCCTACACGGT-ACTTTCCAGAATCGATGACGTT 1379
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 77760644205
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5