BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg319184
Length=1932
Score E
Sequences producing significant alignments: (Bits) Value
AT3G24780.1 | Symbols: | Uncharacterised conserved protein UCP... 1369 0.0
AT5G13210.1 | Symbols: | Uncharacterised conserved protein UCP... 1096 0.0
AT5G43390.1 | Symbols: | Uncharacterised conserved protein UCP... 100 4e-20
> AT3G24780.1 | Symbols: | Uncharacterised conserved protein UCP015417,
vWA | chr3:9049446-9051593 FORWARD LENGTH=2148
Length=2148
Score = 1369 bits (741), Expect = 0.0
Identities = 969/1077 (90%), Gaps = 24/1077 (2%)
Strand=Plus/Plus
Query 560 AAATAAGGCCGGCCTCCACTAGGCAGCTGAGGGTAGAGTACGCAGAGAGGAAGAACCAAG 619
||| |||| |||| |||| ||| |||| ||||||| | |||| ||||||||||||||||
Sbjct 792 AAA-AAGGTCGGCAGCCACGAGGGAGCTAAGGGTAGCGAACGCGGAGAGGAAGAACCAAG 850
Query 620 AAGAGAAAGCCAGAGCAAGCTTGGAGCGCAAGCAAAAGAAGGTTTCAATGG-GAATGGAC 678
| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||| || |
Sbjct 851 AGGAGAAAGCCAGAGCAAGCTTGAAGCGCAAGCAAAAGAAGGTTTCAATGGCGAA-GG-C 908
Query 679 -GCATTTACAAAATATTCTAACGATCCAGACTATAGGTTTCTCCACGAACGCGTCTCTGA 737
|||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct 909 TGCATCTACAAAGTATTCTAACGATCCAAACTATAGGTTTCTCCACGAACGTGTCTCTGA 968
Query 738 CCTATTTGCCAATCAACTAAGGAGAGACCTTGAGTTTTTGACATCCGGCGAACCAAACAA 797
||||| || |||||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct 969 ACTATTCGCAAATCAACTAAAGAGAGACCTTGAGTTTTTGACATCCGGCCAACCAAACAA 1028
Query 798 AATCTCCCTAGCGGCTAAATGGTGTCCCTCACTTGATTCTTGC-TTTGATAAAGCAACTC 856
|||||| |||||||||||||||||||| || |||||||||| | || || ||||||||||
Sbjct 1029 AATCTCTCTAGCGGCTAAATGGTGTCCATCCCTTGATTCTT-CGTTCGACAAAGCAACTC 1087
Query 857 TTCTCTGCGAGAGCATTGCTAGGAAGATCTTTTCCCGTGAATCATTCCCCGAATACGAAG 916
|| ||||||||||||| ||||||||||||||| ||| ||||||||||| ||||||||||
Sbjct 1088 TTATCTGCGAGAGCATAGCTAGGAAGATCTTTCCCCAAGAATCATTCCCGGAATACGAAG 1147
Query 917 GCGTTGAAGATGCTCACTATGCGTACAGAGTTCGTGATCGACTAAGGAAACAGGTTCTTG 976
|||| |||||||||||||||||||||||||||||||| || ||||||||||| || ||||
Sbjct 1148 GCGTGGAAGATGCTCACTATGCGTACAGAGTTCGTGACCGGCTAAGGAAACAAGTCCTTG 1207
Query 977 TTCCTCTCCGGAAGACTCTGCAACTCCCTGAAGTATATATGGGAGCGAGAGATTGGGAAT 1036
||||||||||||||||||||||||||||||||||||| |||||||| |||| |||| |||
Sbjct 1208 TTCCTCTCCGGAAGACTCTGCAACTCCCTGAAGTATACATGGGAGCTAGAGCTTGGCAAT 1267
Query 1037 CTCTCCCTTACAACCGTGTTGCATCAGTGGCGATGAAGTCGTACAAGG-GTTTTTTCTTG 1095
|||||||||| ||||||||||||||||||||||||||||| ||||||| | ||||||||
Sbjct 1268 CTCTCCCTTATAACCGTGTTGCATCAGTGGCGATGAAGTCATACAAGGAG-GTTTTCTTG 1326
Query 1096 AAACATGACGCTGAGAGGTTTCAGCAATATCTTAACGATG-CAAGGATGGGGAAAACGAC 1154
| | ||||| ||||||||||||||||||||||||||| ||| || |||||||||||
Sbjct 1327 TATCGTGACGAAAAGAGGTTTCAGCAATATCTTAACGATGCCAA-GACGGGGAAAACGAA 1385
Query 1155 GATAGCTGCGGGTGCTCTGTTACCTCACGAGATAATAC-GAGAATTAGACTGGGGAGGAG 1213
|||||| || |||||| ||||||||||||||||||| | |||| ||| || || ||||
Sbjct 1386 GATAGCCGCCGGTGCTGTGTTACCTCACGAGATAAT-CAGAGAGTTAAAC---GGCGGAG 1441
Query 1214 ACGGTGGAC-AAGTCGCTGAGCTGCAATGGAAACGAATGGTTGATGACCTTAAAGAGAAA 1272
||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1442 ACGGTGG-CAAAGTCGCTGAGCTGCAATGGAAACGAATGGTTGACGACCTTAAAGAGAAA 1500
Query 1273 GGTTCTTTAACGAACTGCATGGCTATCTCTGACGTTTCGGGATCTATG-ATGGGTGAGCC 1331
|||||||| || |||||||||||||| | ||||||||||||||||||| || ||||||||
Sbjct 1501 GGTTCTTTGACCAACTGCATGGCTATATGTGACGTTTCGGGATCTATGAAT-GGTGAGCC 1559
Query 1332 AATGGAGGTTTCAGTCGCCCTTGGTTTGCTAGTCTCTGAGCTATCAGAAGAGCCATGGAG 1391
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1560 AATGGAGGTTTCAGTCGCCCTTGGATTGCTAGTCTCTGAGCTATCAGAAGAGCCATGGAA 1619
Query 1392 AGGAAAGCTTATAACATTCAG-CGAAAACCCTGAACTGCATTTGGTGACAGGAGACGATT 1450
||||||||||||||||||||| | ||| ||||||||||||||||||| |||||||||||
Sbjct 1620 AGGAAAGCTTATAACATTCAGAC-AAAGTCCTGAACTGCATTTGGTGAAAGGAGACGATT 1678
Query 1451 TGAGGTCAAAAACAGAGTTTGT-GAGGAATATGGAATGGGATATGAACACTGATTTTCAG 1509
|||| ||||||||||||||||| || || ||| ||||||||||||||||||||||||||
Sbjct 1679 TGAGATCAAAAACAGAGTTTGTGGA-GAGCATGCAATGGGATATGAACACTGATTTTCAG 1737
Query 1510 AAAGTGTTTGATTTGATTCTGAGAGTCGCCGTAGAAGGGAAGCTTAGGCCGCAAGATATG 1569
|||||||||||||||||||| | ||| ||||| ||| | ||||||| ||||||||| |||
Sbjct 1738 AAAGTGTTTGATTTGATTCTTAAAGTGGCCGTGGAAAGCAAGCTTAAGCCGCAAGACATG 1797
Query 1570 ATCAAGAGGGTGTTTGTGTTCAGTGACATGGAGTTTGATCAAGCACCGCCTCCGACT 1626
||||||||||||||||||||||||||||||||||||||| |||| || || |||||
Sbjct 1798 ATCAAGAGGGTGTTTGTGTTCAGTGACATGGAGTTTGATGAAGCGTCGACTTCGACT 1854
Score = 490 bits (265), Expect = 2e-137
Identities = 339/375 (90%), Gaps = 4/375 (1%)
Strand=Plus/Plus
Query 48 CAACTCTTCACCCCCCATGGGCTACACCGAGAATGGATCCGCCACGTACCTCTCCGCAGG 107
||| |||||||| | ||||||||||| |||||| |||||||||| ||||||||| ||||
Sbjct 312 CAAATCTTCACCTGCGATGGGCTACACTGAGAATAGATCCGCCACCTACCTCTCCTCAGG 371
Query 108 CAACCCCTGCCTCGACTTCTTCTTCCACGTTGTTCCCTCCACGCCCAAGGAATCTCTTGA 167
||||||||||||||||||||||| ||| ||||||| |||||||||||| ||||||| ||
Sbjct 372 TAACCCCTGCCTCGACTTCTTCTTTCACATTGTTCCTTCCACGCCCAAGAAATCTCTGGA 431
Query 168 GAAGCGGCTACAAGAGGCTTGGGGCCACGACGCCTTAACCACCCTCAAGCTTATCTGTAA 227
| |||||||| | |||||||||| ||| || | |||||||| |||||||||||||||||
Sbjct 432 GCAGCGGCTAGAGGAGGCTTGGGACCATGATTCTTTAACCACTCTCAAGCTTATCTGTAA 491
Query 228 CCTTCGTGGAGTCCGTGGCACCGGAAAATCTGACAAGGAAGGGTTTTACACCGCGGCGTT 287
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 492 CCTTCGTGGAGTCCGTGGCACTGGAAAATCTGACAAGGAAGGGTTTTACACGGCGGCGTT 551
Query 288 GTGGCTCCATGGTCACCATCCCAAAACCCTAGCTTGTAACCTCGAGTC-CATCTC-AACA 345
|||||||||||||| ||||||||||||||||||||||||||||||||| | |||| || |
Sbjct 552 GTGGCTCCATGGTCGCCATCCCAAAACCCTAGCTTGTAACCTCGAGTCTC-TCTCCAA-A 609
Query 346 TTTGGTTACTTTAAAGATTTTCCAGAGGTTCTTTACCGGATTCTACAAGGATCTGAAATC 405
||||| || |||||||||||||| ||| ||||||||||||||||||||||| ||||||||
Sbjct 610 TTTGGCTATTTTAAAGATTTTCCGGAGATTCTTTACCGGATTCTACAAGGACCTGAAATC 669
Query 406 CGCAGTATCCAGAAA 420
|||||||| ||||||
Sbjct 670 CGCAGTATACAGAAA 684
Score = 239 bits (129), Expect = 9e-62
Identities = 139/144 (97%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 1648 GATTATGAGGTGATTGTTAGAAAGTATAGAGAGAAAGGGTACGGAGAAGCTGTGCCGGAG 1707
||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1963 GATTACAAGGTGATTGTGAGAAAGTATAGAGAGAAAGGGTACGGAGAGGCTGTGCCGGAG 2022
Query 1708 ATAGTGTTTTGGAATCTGAGGGATTCGAGGTCAACGCCTGTGCTTGGAAACAAGAAAGGA 1767
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2023 ATTGTGTTTTGGAATCTGAGGGATTCGAGGTCAACGCCTGTGCTTGGAAACAAGAAAGGA 2082
Query 1768 GTGGCTTTGGTAAGTGGGTTTTCC 1791
||||||||||||||||||||||||
Sbjct 2083 GTGGCTTTGGTAAGTGGGTTTTCC 2106
> AT5G13210.1 | Symbols: | Uncharacterised conserved protein UCP015417,
vWA | chr5:4214504-4216686 FORWARD LENGTH=2183
Length=2183
Score = 1096 bits (593), Expect = 0.0
Identities = 888/1028 (86%), Gaps = 29/1028 (3%)
Strand=Plus/Plus
Query 599 ACGCAGAGAGGAAGAACCAAGAAGAGAAAGCCAGAGCAAGCTTGGAGCGCAAGCAAAAGA 658
|||| ||||||||||| |||| ||||||||||||||||||||||| || ||| ||||||
Sbjct 737 ACGCTGAGAGGAAGAATCAAGCCGAGAAAGCCAGAGCAAGCTTGGATCGGAAGAAAAAGA 796
Query 659 AGGTTTCAAT-GGGAATGGACGCATTTACAAAATATTCTAACGATCCAGACTATAGGTTT 717
||||||| || ||||| |||||| ||||||| ||||||| ||||||||||||||| | |
Sbjct 797 AGGTTTCGATGGGGAA-GGACGCGTTTACAAGATATTCTTGCGATCCAGACTATAGATAT 855
Query 718 CTCCACGAACGCGTCTCTGACCTATTTGCCAATCAACTAAGGAGAGACCTTGAGTTTTTG 777
|||||||||||||||||||| ||||| || ||||| |||| || ||| ||||||||||||
Sbjct 856 CTCCACGAACGCGTCTCTGATCTATTCGCAAATCAGCTAAAGAAAGATCTTGAGTTTTTG 915
Query 778 ACATCCGG-CGAACCAAACAAAATCTCCCTAGCGGCTAAATGGTGTCCCTCACTTGATTC 836
|||| ||| | |||||||| ||||||| || || |||||||||||||| || ||||| ||
Sbjct 916 ACAT-CGGACAAACCAAACGAAATCTCTCTTGCTGCTAAATGGTGTCCATCGCTTGACTC 974
Query 837 TTGC-TTTGATAAAGCAACTCTTCTCTGCGAGAGCATTGCTAGGAAGATCTTTTCCCGTG 895
|| | ||||| |||||||||||||||||||||||||||||||||||||||||| | || |
Sbjct 975 TT-CGTTTGACAAAGCAACTCTTCTCTGCGAGAGCATTGCTAGGAAGATCTTTACTCGAG 1033
Query 896 AATCATTCCCCGAATACGAAGGCGTTGAAGATGCTCACTATGCGTACAGAGTTCGTGATC 955
|||||||||| |||||||||||||||| ||| ||||||||||| ||||||||||||||||
Sbjct 1034 AATCATTCCCTGAATACGAAGGCGTTGTAGAAGCTCACTATGCATACAGAGTTCGTGATC 1093
Query 956 GACTAAGGAAACAGGTTCTTGTTCCTCTCCGGAAGACTCTGCAACTCCCTGAAGTATATA 1015
| ||||||||| | |||||||||||||| || || ||||||||||| |||||||||||||
Sbjct 1094 GGCTAAGGAAAGATGTTCTTGTTCCTCTGCGTAAAACTCTGCAACTGCCTGAAGTATATA 1153
Query 1016 TGGGAGCGAGAGATTGGGA-ATCTCTCCCTTACAACCGTGTTGCATCAGTGGCGATGAAG 1074
||||||||||| | ||||| || ||| || ||||||||||| ||||||||||||||||||
Sbjct 1154 TGGGAGCGAGAAACTGGGATAT-TCTTCCGTACAACCGTGTAGCATCAGTGGCGATGAAG 1212
Query 1075 TCGTACAAGG-GTTTTTTCTTGAAACATGACGCTGAGAGGTTTCAGCAATATCTTAACGA 1133
|||||||||| | | || |||||| || ||||| ||||||||||||||||||||| ||||
Sbjct 1213 TCGTACAAGGAGATATT-CTTGAAGCACGACGCAGAGAGGTTTCAGCAATATCTTGACGA 1271
Query 1134 TGCAA-GGATGGGGAAAACGACGATAGCTGCGGGTGCTCTGTTACCTCACGAGATAAT-A 1191
||||| || ||||||||| | | ||||||| |||||| |||| ||||| |||||||| |
Sbjct 1272 TGCAAAGGC-GGGGAAAACCAAGGTAGCTGCTGGTGCTGTGTTGCCTCATGAGATAATCA 1330
Query 1192 CGAGAATTAGACTGGGGAGGAGACGGTGGACAAGTCGCTGAGCTGCAATGGAA-ACGAAT 1250
|||| |||||| || | | ||||||||||||||| || |||||||||||||| | |||
Sbjct 1331 -GAGAGTTAGAC-GGTG-G-AGACGGTGGACAAGTAGCAGAGCTGCAATGGAAGA-GAAC 1385
Query 1251 GGTTGATGACCTTAAAGAGAAAGGTTCTTTAACGAACTGCATGGCTATCTCTGACGTTTC 1310
||| ||||| | ||||||||||||||||| | ||| || || ||| ||| |||||||||
Sbjct 1386 GGTAGATGATATGAAAGAGAAAGGTTCTTTGAGGAATTGTATAGCTGTCTGTGACGTTTC 1445
Query 1311 -GGGATCTATGA-TGGGTGAGCCAATGGAGGTTTCAGTCGCCCTTGGTT-TGCTAGTCTC 1367
||| ||||||| ||| ||| ||||||||||||| || || |||| | ||||||||||
Sbjct 1446 AGGG-TCTATGAATGG-TGAACCAATGGAGGTTTGTGTGGCT-TTGGGTCTGCTAGTCTC 1502
Query 1368 TGAGCTATCAGAAGAGCCATGGAGAGGAAAGCTTATAACATTCAGCGAAAACCCTGAACT 1427
||||||||| ||||||||||||| ||||||||| ||||| |||||| |||| || || |
Sbjct 1503 TGAGCTATCTGAAGAGCCATGGAAAGGAAAGCTAATAACTTTCAGCCAAAATCCGGAGTT 1562
Query 1428 GCATTTGGTGACAGGAGACGATTTG-AGGTCAAAAACAGAGTTTGTGAGGAATATGGAAT 1486
||||||||||| |||||||||| || | ||||||||||||||||| | || ||| |||
Sbjct 1563 GCATTTGGTGAAAGGAGACGATCTGTAC-TCAAAAACAGAGTTTGTTAAAAAAATGCAAT 1621
Query 1487 GGGATATGAACACTGATTTTCAGAAAGTGTTTGATTTGATTCT-GAGAGTCGCCGTAGAA 1545
||| ||||||||||||||||||||||||||||||||||||||| | |||| |||||| ||
Sbjct 1622 GGGGTATGAACACTGATTTTCAGAAAGTGTTTGATTTGATTCTTG-GAGTGGCCGTACAA 1680
Query 1546 GGGAAGCTTAGGCCGCAAGATATGATCAAGAGGGTGTTTGTGTTCAGTGACATGGAGTTT 1605
| |||||| | |||| |||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 1681 GAGAAGCTGAAGCCGGAAGAGATGATCAAGAGGGTGTTTGTGTTCAGTGATATGGAGTTT 1740
Query 1606 GATCAAGC 1613
||||||||
Sbjct 1741 GATCAAGC 1748
Score = 497 bits (269), Expect = 1e-139
Identities = 410/476 (86%), Gaps = 17/476 (4%)
Strand=Plus/Plus
Query 1 ATGGACGCGATGGTCTCAAACTTCAACAAATCAACTA-A-AC-TCAACGTCAACTCTTCA 57
|||||||| ||||| ||||| |||||||| ||| ||| | | |||||||||||| |
Sbjct 160 ATGGACGCTATGGTTTCAAATTTCAACAACTCAGCTAGAGTCAACAACGTCAACTC-T-- 216
Query 58 CCCCCCATGGGCTACACCGAGAATGGATCCGCCACGTACCTCTCCGCAGGCAACCCCTGC 117
|| || |||||||||||||||||| ||||||||| ||||||||| ||||||||||||||
Sbjct 217 CCTCCGATGGGCTACACCGAGAATAAATCCGCCACTTACCTCTCCTCAGGCAACCCCTGC 276
Query 118 CTCGACTTCTTCTTCCACGTTGTTCCCTCCACGCCCAAGGAATCTCTTGAGAAGCGGCTA 177
|||||||||||||||||||||||||| |||||| || | ||||| ||| || || ||
Sbjct 277 CTCGACTTCTTCTTCCACGTTGTTCCAAGCACGCCTAAACACTCTCTCGAGCAGTGGTTA 336
Query 178 CAAGAG-GCTTGGGGCCACGACGCCTTAACCACCCTCAAGCTTATCTGTAACCTTCGTGG 236
|||| | ||||||| |||||||||||| ||||| ||||||||||||||||| ||||||||
Sbjct 337 CAAG-GTGCTTGGGACCACGACGCCTTGACCACACTCAAGCTTATCTGTAATCTTCGTGG 395
Query 237 AGTCCGTGGCACCGGAAAATCTGACAAGGAAGGGTTTTACACCGCGGCGTTGTGGCTCCA 296
||||||||||||||||||||| |||||||||||||||||||| ||||| || ||||||||
Sbjct 396 AGTCCGTGGCACCGGAAAATCCGACAAGGAAGGGTTTTACACGGCGGCTTTATGGCTCCA 455
Query 297 TGGTCACCATCCCAAAACCCTAGCTTGTAACCTCGAGTC-CAT-CTCAACATTTGGTTAC 354
||||| |||||||||||||||||||||||||||||||| | | ||||| ||||| |||
Sbjct 456 TGGTCGTCATCCCAAAACCCTAGCTTGTAACCTCGAGTCTCTTTCTCAA--TTTGGATAC 513
Query 355 TTTAAAGATTTTCCAGAGGTTCTTTACCGGATTCTACAAGGATCTGAAATCCGCA-GTAT 413
|||||||||||||||||| |||||||||||||||||||||||||||||||||| | | ||
Sbjct 514 TTTAAAGATTTTCCAGAGCTTCTTTACCGGATTCTACAAGGATCTGAAATCCGGAAG-AT 572
Query 414 CCAGAAATTGGAATGGAGCCAGAGGAAGGGCGGAGCATCTCGAAATAGAAGAGCTC 469
|||||||| ||| || | ||||||| | | ||| ||| || |||||||||||
Sbjct 573 CCAGAAATCAGAAAGGTTCAAGAGGAAAAGTGAAGC-TCTAGA--TAGAAGAGCTC 625
Score = 106 bits (57), Expect = 9e-22
Identities = 71/78 (91%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 1853 ATGGAGAGATTGATCCCATGATGATCATGGAGGCTGCTATATCTAAAGATGAGTATAAGT 1912
|||||||||||||||| ||||||| |||||| ||||||| |||||||||||||||||||
Sbjct 2006 ATGGAGAGATTGATCCTGTGATGATGATGGAGACTGCTATTTCTAAAGATGAGTATAAGT 2065
Query 1913 CGCTTGTTGTAATTGATT 1930
|||||||||| ||||||
Sbjct 2066 CGCTTGTTGTTGTTGATT 2083
> AT5G43390.1 | Symbols: | Uncharacterised conserved protein UCP015417,
vWA | chr5:17422799-17424964 REVERSE LENGTH=2166
Length=2166
Score = 100 bits (54), Expect = 4e-20
Identities = 186/245 (76%), Gaps = 28/245 (11%)
Strand=Plus/Plus
Query 1378 GAAGAGCCATGGAGA-GGAAAGCTTATAACATTCAGCGAAAACCCTG-AACTGCAT-TTG 1434
|||||||| |||| | |||||| |||| || || ||||||||||| | | || ||| ||
Sbjct 1444 GAAGAGCCGTGGAAAGGGAAAG-TTATCACTTTTAGCGAAAACCC-GCAGCTTCATGTT- 1500
Query 1435 GTGACAGGAG-ACGA-TTTGAGGTCA-AAAAC-AGAGTTTGTGAG-GAATATGGA-ATGG 1488
|| || || | ||| | ||| | | || || | ||||||| || ||| ||||| | |
Sbjct 1501 GTCAC-GG-GTTCGAGTCTGA-GAGAGAAGACTA-AGTTTGTTAGAGAA-ATGGATTTTG 1555
Query 1489 GATATGAACACTGATTTTCAGAAAGTGTTTGATTTGATTCTGAGA-GTCGCCGT--AGAA 1545
|| || ||||| ||||| ||||| ||||||||| |||||| ||| || || || ||||
Sbjct 1556 GA-ATCAACACAGATTTCCAGAAGGTGTTTGATCGGATTCT-AGAGGTTGCTGTCGAGAA 1613
Query 1546 GGGAAGCTTAGGCCG--CAAGATATGATCAAGAGGGTGTTTGTGTTCAGTGACATGGAGT 1603
|| |||| ||| || | ||||||||| || ||||||||||||||||||||||||
Sbjct 1614 --TAA-CTTA-ACCGATGAACAGATGATCAAGCGGTTGTTTGTGTTCAGTGACATGGAGT 1669
Query 1604 TTGAT 1608
|||||
Sbjct 1670 TTGAT 1674
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 95682238770
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5