BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg319227
Length=3111
Score E
Sequences producing significant alignments: (Bits) Value
AT1G14610.1 | Symbols: TWN2, VALRS | valyl-tRNA synthetase / va... 2318 0.0
AT1G27160.1 | Symbols: | valyl-tRNA synthetase / valine--tRNA ... 787 0.0
> AT1G14610.1 | Symbols: TWN2, VALRS | valyl-tRNA synthetase /
valine--tRNA ligase (VALRS) | chr1:5008244-5014533 REVERSE LENGTH=3632
Length=3632
Score = 2318 bits (1255), Expect = 0.0
Identities = 2441/3001 (81%), Gaps = 131/3001 (4%)
Strand=Plus/Plus
Query 148 GAAGAGAATCATGCCGATTTTTCT-GACCCAGAAACTCCTATTGGCGAGAGGAAAAGGCT 206
|||||||||| || || |||| | ||||| ||||||||| |||| ||||||||||||||
Sbjct 384 GAAGAGAATCCTGAGGA-TTTTGTGGACCCTGAAACTCCTCTTGGAGAGAGGAAAAGGCT 442
Query 207 ATCTTCACAGATGGCCAAACATTACAGTCCTTC-AGCGGTGGAAAAATCGTGGTATGAAT 265
|||||||||||||||||||| ||||| ||| | | | ||||| ||||| ||||||| |
Sbjct 443 TTCTTCACAGATGGCCAAACAATACAGCCCTGCTA-CCGTGGAGAAATCATGGTATGCTT 501
Query 266 GGTGGGAGACATCTGA-GTTTTTCAAGGCTGACGCGACTAGTTCCAAACCACAGTTTGTG 324
||||||||| |||||| ||||| ||||| || || | |||||||| |||| |||||
Sbjct 502 GGTGGGAGAAATCTGACCTTTTT-AAGGCGGATGCTAAGAGTTCCAAGCCACCTTTTGTA 560
Query 325 ATTGTTCTTCCTCCTCCCAATGTGACTGGCGCGTTGCACATCGGCCACGCACTAACCTGT 384
||||||||||||||||| ||||||||||| || ||||| || ||||| || || || | |
Sbjct 561 ATTGTTCTTCCTCCTCCAAATGTGACTGGAGCCTTGCATATTGGCCATGCGCTTACATCT 620
Query 385 GCAGTCCAGGACACACTGATTCGTTGGAAGAGAATGTCTGGCTTTAATGCTTTGTGGGTT 444
||| | |||| ||| | ||||||||||||||||||||||| | |||||||||||||||
Sbjct 621 GCAATTGAGGATACAATTATTCGTTGGAAGAGAATGTCTGGGTATAATGCTTTGTGGGTA 680
Query 445 CCTGGGTTTGACCATGCTGGTATTGCTACACAGGTTGTGGTCGAGAAACATCTCA-GCCG 503
|| ||| |||||||||||||||| ||||||||||| |||||||||||| | ||| | ||
Sbjct 681 CCCGGGGTTGACCATGCTGGTATAGCTACACAGGTGGTGGTCGAGAAAAAGATCATG-CG 739
Query 504 TGAAACAGG-ATTGACAAGACATGACT-TTGGCCGTGAGGAGTTCTTGAACCATGTCTGG 561
||| | ||| | |||| || ||||| | |||||||||| || ||| | || | || |||
Sbjct 740 TGATAGAGGCA-TGACTAGGCATGA-TGTTGGCCGTGAAGAATTCGTAAAGGAAGTGTGG 797
Query 562 CAGTGGACAG-A-GAGTAAAAGTGGTACAA-TCAAATCACAGCTACGTCGTA-T-GG-GC 615
|||||| || | ||| | | ||||||| || || |||||||||| || | | || ||
Sbjct 798 AAGTGGA-AGAACCAGT-ACGGCGGTACAATTCTAA-CACAGCTACGGCG-ACTAGGAGC 853
Query 616 TCATCTCTTGATTGGTCCCGTGAGTGTTTTACCATGGACGAGCACAGATCAAAGGCTGTC 675
| ||||| || ||||| |||||||||||||| ||||||||||| |||||||| ||||||
Sbjct 854 T--TCTCTCGACTGGTCTCGTGAGTGTTTTACAATGGACGAGCAAAGATCAAAAGCTGTC 911
Query 676 ACTGAGGCCTTTGTAAGGTTACACAAGGAAGGGCTTATCTACAGGGATCTCCGGCTTGTT 735
||||||||||||||| ||||| |||| ||||||||||| || |||||| | |||||||||
Sbjct 912 ACTGAGGCCTTTGTACGGTTATACAAAGAAGGGCTTATATATAGGGATATTCGGCTTGTT 971
Query 736 CATTGGGACTGCT-TCCTT-AGCACCGCCATATCT-AAGCGTGAGGTTGAGCATATCGAG 792
||||||| || | | || || || ||||||||| | | |||||||||| |||||||
Sbjct 972 AATTGGGATTG-TAT-TTTGAGAACAGCCATATCTGATG-TTGAGGTTGAGTATATCGAC 1028
Query 793 ATCAAAGAAAGAACACCAATCAAAGTCCCTGGGTATGAGAAGCCAGTTGTATTTGGTCTT 852
|| ||||||| ||| | | | ||||| ||||| |||||||||||||| | ||||||||||
Sbjct 1029 ATTAAAGAAAAAACGCTACTAAAAGTTCCTGGCTATGAGAAGCCAGTAGAATTTGGTCTT 1088
Query 853 ATCACTTCGTTTGCTTACCCTCTTGAGAGAGGAGGC---GGTGAGGTTGTTGTTGCCACT 909
| || |||||||||||||||| || ||| |||||| || ||||| |||||||||||
Sbjct 1089 CTTACCTCGTTTGCTTACCCTC-TG-GAG-GGAGGCTTGGGAGAGGTAATTGTTGCCACT 1145
Query 910 ACTAGGGTGGAAACTATGCTTGGTGATACCGCCATTGCTGTTCATCCCGATGATGCAAGA 969
|| ||||||||||| |||||||| ||||| || |||||| ||||||| ||||||||||||
Sbjct 1146 ACCAGGGTGGAAACGATGCTTGGGGATACTGCTATTGCTATTCATCCTGATGATGCAAGA 1205
Query 970 TACAAGCATCTTCA-CGGAGAGTTTGCTGTGCACCCGTTCAATGGGCGGAAGCTACCAAT 1028
|||||||||||||| ||| | |||||||||||||| || |||||||||||| |||| ||
Sbjct 1206 TACAAGCATCTTCATGGGA-AATTTGCTGTGCACCCATTTAATGGGCGGAAGTTACCTAT 1264
Query 1029 CATCTGTGAT-GAGATACTCGTTGACCCAAATGTTGGTACTGGTTGTGTTAAGATCACTC 1087
||||||||| || ||||| ||||| |||||| |||||||||||||||||||||| ||||
Sbjct 1265 TATCTGTGATGGA-ATACTTGTTGATCCAAATTTTGGTACTGGTTGTGTTAAGATTACTC 1323
Query 1088 CAGCACATGA-CACCAATGA-TTTCGATGTAGGAAGGCGCCACAATCTGGAGTTTATAAA 1145
| || ||||| | ||||||| | | || || |||| ||||||||| ||||| ||||||||
Sbjct 1324 CTGCCCATGATC-CCAATGACTGT-GAGGTTGGAAAGCGCCACAAGCTGGAATTTATAAA 1381
Query 1146 CGTATTCACTGATGATGGAAGGATCAATGCGAATGGCGGGCCTGACTTCACTGGCATGCC 1205
||||||| |||||||||| ||||| | ||||| ||| |||||||| | || |||||
Sbjct 1382 TATATTCACAGATGATGGAAAAATCAACACAAATGGTGGGTCTGACTTCGCAGGGATGCC 1441
Query 1206 ACGCTTTGCCGCTCGTGAAGCTA-TCGTTGAAGCTCTGC-GTAAGAAGGGGCTGTACAGA 1263
||||||||| |||||||| || | | ||||||||||||| | ||| ||||||||||||||
Sbjct 1442 ACGCTTTGCAGCTCGTGAGGC-AGTTGTTGAAGCTCTGCAG-AAGCAGGGGCTGTACAGA 1499
Query 1264 GGTGAGGAAAACAA-CAAGATGACAATTGGAGTTTGCTCAAGAAGTAGTGATGTTGCTGA 1322
|||| ||||||| || |||| ||||| |||||||||||| || ||||||| |||
Sbjct 1500 GGTGCCAAAAACAATGAA-ATGAGGCTTGGACTTTGCTCAAGAACTAATGATGTTATTGA 1558
Query 1323 GCCTATGCTAAAGCCTCAGTGGTACGTGAGTTGCAGCCTGA-TGGCAAAGGAGGCTCTTG 1381
||||||| |||||||||| |||||||| | |||||| ||| ||| ||||||||||||||
Sbjct 1559 GCCTATGATAAAGCCTCAATGGTACGTTAACTGCAGCATGATTGG-AAAGGAGGCTCTTG 1617
Query 1382 ATGTTGCT-GC-C-------AACGGGAAGA-TTGAGTTTATTCCCAAGCAGTACTCTGCA 1431
|||||||| | | ||| ||| | | |||||| | || ||||||||| | |||
Sbjct 1618 ATGTTGCTATCACTGATGAAAACAAGAA-ACTCGAGTTTGTACCAAAGCAGTACACAGCA 1676
Query 1432 GAATGGAGAAGATGGCTAGAGAGCATATGCGACTGGTGCATCTCCAGACAGCTTTGGTGG 1491
|||||||||||||||||||||| |||| | |||||||| || || |||||||||||||||
Sbjct 1677 GAATGGAGAAGATGGCTAGAGAACATACGTGACTGGTGTATTTCAAGACAGCTTTGGTGG 1736
Query 1492 GGTCACAGAATACCGGCATGGTACGCCACTCTAGAAGAAGATCAGCTTAAGGAAACAGGT 1551
|| ||||||||||| |||||||| ||||||||||| || |||||||| ||||| |||
Sbjct 1737 GGACACAGAATACCAGCATGGTATGCCACTCTAGAGGAGGATCAGCTCAAGGAGGTTGGT 1796
Query 1552 GCCTACAACGACCATTGGGTCGTTGCCAGAAAC-GAGGAAGAAGCTCGAAAAGAGGCTGC 1610
|| |||| ||||||||||| ||||| || ||| ||||| || |||||| ||||||||||
Sbjct 1797 GCATACAGTGACCATTGGGTTGTTGCTAG-AACTGAGGACGATGCTCGAGAAGAGGCTGC 1855
Query 1611 ACAAAAATTTTCT-GGGAAGAAGTTGTTGGAGCTCTCCCAAGATCCTGATGTGCTTGACA 1669
|| ||||||| | ||||||||| | || || ||| | | |||||||||||| ||||| |
Sbjct 1856 TCAGAAATTTT-TGGGGAAGAAG-T-TT-GAACTCACTCGAGATCCTGATGTACTTGATA 1911
Query 1670 CTTGGTTTTCCTCTGGTCTCTTTCCCTTATCTGTTTTGGGATGGCCTGATGAAACTGAGG 1729
| |||||||| ||||| |||||||| ||||||||| |||||||||| |||| ||| || |
Sbjct 1912 CATGGTTTTCTTCTGGGCTCTTTCCATTATCTGTTCTGGGATGGCCAGATGTAACCGATG 1971
Query 1730 ACTTCAAAGCTTTCTATCCAACGTCTGTTCTTGAAACTGGACATGACATTCTGTTTTTCT 1789
|||||||||| ||||||||||| ||||||||||||||||||||||| || || ||||| |
Sbjct 1972 ACTTCAAAGCCTTCTATCCAACTTCTGTTCTTGAAACTGGACATGATATCCTCTTTTTTT 2031
Query 1790 GGGTTGCTCGCATGGTTATGTTAGGAATGAAAGTGGGTGGTGGGGATGTTCCTTTCAGGA 1849
|||||||||| ||||||||| | ||||||||| | |||||| || ||||| ||||| |
Sbjct 2032 GGGTTGCTCGTATGGTTATGATGGGAATGAAACTAGGTGGT---GAGGTTCCATTCAGTA 2088
Query 1850 AGGtttttttGCATCCCATGATACGTGATGCACATGGCCGCAAGATGTCAAAGTCTCTTG 1909
|||||| ||| ||||| |||||||||||||||||||| || || |||||||| |||||||
Sbjct 2089 AGGTTTATTTCCATCCTATGATACGTGATGCACATGGGCGTAAAATGTCAAAATCTCTTG 2148
Query 1910 GAAATGGCATTGATCCGCTTGAAGTCATTAACGGTGTAACTCTCGCAGGTCTACACGCCA 1969
|||||| ||||||||| |||||||| || ||||| |||||||| | |||||| || |
Sbjct 2149 GAAATGTCATTGATCCACTTGAAGTAATAAACGGAGTAACTCTTGAAGGTCTTCATAAGA 2208
Query 1970 GGTTAGAAGAAGGTAACCTGGATCCCAAGGAGCTGGTTGTTGCCAAGGAGGGACAGGTGA 2029
| |||||||| |||||| ||||||| || ||| || |||||||||| || ||||| ||||
Sbjct 2209 GATTAGAAGAGGGTAACTTGGATCCAAAAGAGGTGATTGTTGCCAAAGAAGGACAAGTGA 2268
Query 2030 AGGATTTTCCAAATGGTATCCCTGAATGTGGCGCTGACTCTCTTCGATTTGCCCTTGTAT 2089
|||| ||||||||||||||||||||||||||| ||||| ||||||| ||||| || || |
Sbjct 2269 AGGACTTTCCAAATGGTATCCCTGAATGTGGCACTGACGCTCTTCGGTTTGCGCTCGTCT 2328
Query 2090 CTTACACGGCCCAGTCTGATAAAATCAACATGGATGTCCTCCGAGTTGTTGGTTACCGCC 2149
||||||| || |||||||||||||| ||| |||| | || ||||||||||||||||| |
Sbjct 2329 CTTACACTGCTCAGTCTGATAAAATTAACTTGGACATTCTTCGAGTTGTTGGTTACCGTC 2388
Query 2150 AGTGGTGTAATAAACTGTGGAACGCCGTCAGATTTGCGATGATGAAGCTTGGTGATGGCT 2209
| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |
Sbjct 2389 AATGGTGTAATAAACTGTGGAACGCCGTCAGATTTGCAATGATGAAGCTTGGCGATGGTT 2448
Query 2210 ATACTCCTCCTTCGCA-AGTTCTAAGCCCTGGAGCCATGCCCTTCAGCTGCCAATGGATC 2268
|||||||||| ||| | | ||||| |||| | ||||||| |||||||||||||||||
Sbjct 2449 ATACTCCTCC---GCAGACT-CTAAGTCCTGAAACCATGCCTTTCAGCTGCCAATGGATT 2504
Query 2269 CTTTCTGTACTAAATACGGCAATATCAAAGACTGTGGAT-TC-CTTGAAAGCTTTTGAGT 2326
|| ||||| ||||||| ||||||||||||||| |||| | || || || || |||||||
Sbjct 2505 CTCTCTGTTCTAAATAAGGCAATATCAAAGACAGTGG-TGTCACTAGAT-GCATTTGAGT 2562
Query 2327 TATCGGATGCAGCCAACACGGTGTATGCCTGGTGGCAATACCAATTCTGTGATGTATTTA 2386
| ||||||||||||||||| | ||||| |||||||||||||||||||||||||| | |
Sbjct 2563 TCTCGGATGCAGCCAACACAATATATGCATGGTGGCAATACCAATTCTGTGATGTGTACA 2622
Query 2387 TCGAAGCAGTTAAGCCTTATTTTTCTGCTGAAAACCCA--G---GC---AG-GAC--C-C 2434
| |||||| |||||||||||||| ||| ||| |||||| | || || || | |
Sbjct 2623 TTGAAGCAATTAAGCCTTATTTTGCTGGTGACAACCCAACGTTTGCTTCAGAGAGGGCTC 2682
Query 2435 ATGCACAAGACGCTCTCTGGGTGTGTCTCGAGACTGGCTTGCGATTGCTGCATCCGTTTA 2494
|||||||| | ||||||||| | |||| |||||||| ||| || |||| || || ||||
Sbjct 2683 ATGCACAACATGCTCTCTGGATAAGTCTGGAGACTGGTTTGAGACTGCTTCACCCATTTA 2742
Query 2495 TGCCTTTTGTAACAGAAGAGCTGTGGCAGCGG-TTGCCGTCACCGCAA-GACTGTGAACG 2552
|||||||||| || |||||||| ||||| || || ||| |||| ||| ||| ||| |
Sbjct 2743 TGCCTTTTGTTACTGAAGAGCTATGGCAACGACTTCCCG-CACC-CAAAGACACAGAAAG 2800
Query 2553 GAAGGCGTCTATCATGATATGTGACTACCCTTCTCCCGA-AGAGAAGTGGACAAACGAGA 2611
||||| ||||||||||||||||||||||| ||| || | |||||| ||| |||| ||||
Sbjct 2801 AAAGGCTTCTATCATGATATGTGACTACCCATCTGCC-ATAGAGAACTGGTCAAATGAGA 2859
Query 2612 AGGTGGAGACCGAAATGGACGTGGTTCTGGTGACCGTGAAAA-CTCTCAGAGCTTTGAGA 2670
| ||||||| |||||||||| ||||||| || |||||| | | ||||| | ||
Sbjct 2860 AAGTGGAGAGCGAAATGGACACCGTTCTGGCAACTGTGAAATGCA-TGAGAGCACTCAG- 2917
Query 2671 GCTGCAGAGTCGCTAAAGAGATGGATAAATGAAAGGTTGCATGCGTTTGCTCTGTGCGAA 2730
| |||| || ||| ||| | || ||| |||||||| | ||| ||||||||||| |||
Sbjct 2918 G--GCAGGGTTGCTGGAGAAACAGAAAAACGAAAGGTTACCTGCTTTTGCTCTGTGTGAA 2975
Query 2731 AACG-CATTGACA-CTGGGAATTGTGCAA-TCCCATGAGTTGGAGATCAGAACT-TTGGC 2786
||| | | ||| ||| |||||| || || || ||||||||||||||||| ||| |
Sbjct 2976 AACAACGTA-ACATCTGA-AATTGTT-AAGTCTCACGAGTTGGAGATCAGAACCCTTG-C 3031
Query 2787 AAATCTCTCATCCTTTGAGGTTGTGTTGAAGGGAGAAGACAAAGCAGC-CCAATCTGGAT 2845
|||||| |||||||| |||||||||| || ||| || || ||||| ||| ||||||
Sbjct 3032 AAATCTATCATCCTTAGAGGTTGTGTCAAAAGGACAA--CAT-GCAGCACCAC-CTGGAT 3087
Query 2846 CGGCTGTTGTAGAGACTGTGAATGAGAACCTCAAGGTGTATCTAAAATTGGATGGAGCTT 2905
| | |||| ||| | ||||| ||||||||||| || ||||| || |||| |||||
Sbjct 3088 CTTCAGTTG-AGA--CGGTGAACGAGAACCTCAAAGTATATCTTGAAGTGGACGGAGC-- 3142
Query 2906 CCATTAATGCGGAAGCTGAGTCT-GAGAAAATCAGAAACAAGATTA-TAGAAGTACAAAA 2963
| ||||| | |||||||| | || |||||||||||||||||| | ||| |||||||
Sbjct 3143 C-ATTAACACAGAAGCTGAA-CAAGAAAAAATCAGAAACAAGATTGGT-GAACTACAAAA 3199
Query 2964 GCAAAAGGAGAAGTTGCAGAAGGTAATGGGGGTGACTGGGTACGAAGACAAGATCCCTGC 3023
||||| ||||||||||||||| | ||| | ||| || |||||||| ||| |||||||
Sbjct 3200 ACAAAAAGAGAAGTTGCAGAAGATGATGAGTGTGTCTACTTACGAAGAGAAGGTCCCTGC 3259
Query 3024 AAACATTAGGGAAGACAACTTGAGGAAGCTCT-CAAAGTTTCTTGAAGAATTCCGATTTC 3082
|| || | ||||||||| | ||||| | | ||| | || |||||||| ||||||
Sbjct 3260 GAATATAAAAGAAGACAACGCAAACAAGCT-TGCTAAGATACTCCAAGAATTC-GATTTC 3317
Query 3083 T 3083
|
Sbjct 3318 T 3318
> AT1G27160.1 | Symbols: | valyl-tRNA synthetase / valine--tRNA
ligase-related | chr1:9432418-9433190 FORWARD LENGTH=773
Length=773
Score = 787 bits (426), Expect = 0.0
Identities = 613/701 (87%), Gaps = 22/701 (3%)
Strand=Plus/Plus
Query 2139 TGGTTACCGCCAGTGGTGTAATAAACTGTGGAACGCCGTCAGATTTGCGATGATGAAGCT 2198
||| ||||||||||||||||| ||||||||||| || |||||||||||||||||||||||
Sbjct 1 TGGCTACCGCCAGTGGTGTAACAAACTGTGGAATGCTGTCAGATTTGCGATGATGAAGCT 60
Query 2199 TGGTGATGGCTATACTCCTCCT-TCGCAAGTTCTAAGCCCTGGAGCCATGCCCTTCAGCT 2257
||| ||||| |||||||||||| | |||| |||| ||||| | ||||| |||||||||
Sbjct 61 TGGCGATGGGTATACTCCTCCTGT-GCAAACTCTACGCCCTAAAACCATGACCTTCAGCT 119
Query 2258 GCCAATGGATCCTTTCTGTACTAAATACGGCAATATCAAAGACTGTGGATTCCTTGAAAG 2317
|||||||||| |||||| |||| | | ||||||| ||||| |||||||||||||| |
Sbjct 120 GCCAATGGATTCTTTCTTTACT--A-A---CAATATCGAAGACAGTGGATTCCTTGAATG 173
Query 2318 CTTTTG-AGTTATCGGATGCAGCCAACACGGTGTATGCCTGGTGGCAATACCAATTCTGT 2376
| |||| | ||||||||||| ||||||| |||||||| |||||||||||||| ||||||
Sbjct 174 CGTTTGCA-TTATCGGATGCTGCCAACA--GTGTATGCTTGGTGGCAATACCAGTTCTGT 230
Query 2377 GATGTATTTATCGAAGCAGTTAAGCCTTATTTTTCTGCTGAAAAC-CCAGGCAGGACCCA 2435
|||||||||||||| ||| ||||||||||||||||||||| | || | | | |||| ||
Sbjct 231 GATGTATTTATCGAGGCAATTAAGCCTTATTTTTCTGCTG-ACACTCAAAGAAGGATTCA 289
Query 2436 TGCACAAGACGCTCTCTGGGTGTGTCTCGAGACTGGCTTGCGATTGCTGCATCCGTTTAT 2495
||||||||| |||||||||||||||||||||||||| ||| ||||||||||||| |||||
Sbjct 290 TGCACAAGATGCTCTCTGGGTGTGTCTCGAGACTGGTTTGAGATTGCTGCATCCATTTAT 349
Query 2496 GCCTTTTGTAACAGAAGAGCTGTGGCAGCGGTTGCCGTCACCGCAAGACTGTGAACGGAA 2555
||||| | | |||||||||||||||||||||||||| ||| ||||||||| |||||| ||
Sbjct 350 GCCTTATATTACAGAAGAGCTGTGGCAGCGGTTGCCTTCATCGCAAGACTCTGAACGAAA 409
Query 2556 GGCGTCTATCATGATATGTGACTACCCTTCTCCCGA-AGAGAAGTGGACAAACGAGAAGG 2614
||||||||||||||||||||||||||| ||| || | ||||| |||||||||||||||||
Sbjct 410 GGCGTCTATCATGATATGTGACTACCCATCTTCC-ATAGAGATGTGGACAAACGAGAAGG 468
Query 2615 TGGAGACCGAAATGGACGTGGTTCTGGTGACCGTGAAAACTCTCAGAGCTTTGAGAGCTG 2674
|||| || ||||||||| ||||||| | ||||||||||||||| || || |||||||||
Sbjct 469 TGGAAACTGAAATGGACATGGTTCTAGCGACCGTGAAAACTCTTAGGGCACTGAGAGCTG 528
Query 2675 CAGAGTCGCTAAAGAGATGGATAAATGAAAGGTTGCATGCGTTTGCTCTGTGC-GAAAAC 2733
||||||||||||||||| || |||||||| ||| |||||||||||||||| | | |||
Sbjct 529 CAGAGTCGCTAAAGAGACAGAGAAATGAAAAGTTCCATGCGTTTGCTCTGT-CTGGAAAT 587
Query 2734 GCATTGACACTGGGAATTGTGCAATCC-CATGAGTTGGAGATCAGAACT-TTGGCAAATC 2791
||||| |||||||| |||||| || || |||||| |||||||||||||| ||| ||||||
Sbjct 588 GCATTAACACTGGGGATTGTGAAA-CCACATGAGCTGGAGATCAGAACTCTTG-CAAATC 645
Query 2792 TCTCATCCTTTGAGGTTGTGTTGAAGGGAGAAGACAAAGCA 2832
||||||||||||||||| |||||| ||||||||||||||||
Sbjct 646 TCTCATCCTTTGAGGTTATGTTGAGGGGAGAAGACAAAGCA 686
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 154714852212
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5