BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg319239
Length=1431
Score E
Sequences producing significant alignments: (Bits) Value
AT2G04070.1 | Symbols: | MATE efflux family protein | chr2:135... 2050 0.0
AT2G04050.1 | Symbols: | MATE efflux family protein | chr2:133... 1951 0.0
AT2G04080.1 | Symbols: | MATE efflux family protein | chr2:135... 1757 0.0
AT2G04040.1 | Symbols: ATDTX1, TX1 | MATE efflux family protein... 1740 0.0
AT2G14661.1 | Symbols: | Pseudogene of AT2G04040; ATDTX1; anti... 691 0.0
AT2G04066.1 | Symbols: | MATE efflux family protein | chr2:135... 492 4e-138
> AT2G04070.1 | Symbols: | MATE efflux family protein | chr2:1353755-1355790
REVERSE LENGTH=1623
Length=1623
Score = 2050 bits (1110), Expect = 0.0
Identities = 1329/1436 (93%), Gaps = 10/1436 (1%)
Strand=Plus/Plus
Query 1 ATGGAAGAGCCATTTCTTCCGGAAGATGAGCAGCTAGTCCCCTGTAAAGCCACATGGCAA 60
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||
Sbjct 1 ATGGAAGAGCCATTTCTTCCGCAAGATGAGCAGATAGTCCCCTGTAAAGCCACATGG-AA 59
Query 61 AA-TGGTCAGCTCAACGTCGAGCTGAAGAAAGTGAGCCGCTTGGCCGCTCCAATGGCCAC 119
|| |||||||||||| ||||||||||||||||||||||||||||| | ||| ||||||||
Sbjct 60 AAGTGGTCAGCTCAATGTCGAGCTGAAGAAAGTGAGCCGCTTGGCTGTTCCTATGGCCAC 119
Query 120 CGTGACCATTGCTCAGTACTTATTGCCTGTCATCTCAGTCATGGTCGCCGGTCACAACGG 179
|||||||||||| |||||||||||||| |||||||||||||||||||| || ||||||||
Sbjct 120 CGTGACCATTGCACAGTACTTATTGCCAGTCATCTCAGTCATGGTCGCTGGCCACAACGG 179
Query 180 CGAGCTCCAGCTGTCCGGTGTCGCTCTTGCCACATCCTTCACAAACGTCTCCGGTTTCAG 239
|||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||
Sbjct 180 CGAGCTCCAGCTCTCCGGTGTCGCTCTTGCTACCTCCTTCACAAATGTCTCCGGTTTCAG 239
Query 240 CATTATGTATGGGTTAGTGGGTGCACTAGAAACACTTTGTGGCCAAGCTTATGGAGCCAA 299
|||||||| ||||||||||||| |||||||||| |||| |||||||||||||||||||||
Sbjct 240 CATTATGTTTGGGTTAGTGGGTTCACTAGAAACTCTTTCTGGCCAAGCTTATGGAGCCAA 299
Query 300 ACAATACGAAAAACTCGGAACCTATACATACTCTGCAATTGCCTCTAACATCCCTATTTG 359
||||||||||||| | ||||||||||||||||| |||||| |||||||||||||||| ||
Sbjct 300 ACAATACGAAAAAATGGGAACCTATACATACTCCGCAATTTCCTCTAACATCCCTATATG 359
Query 360 TGTCCTCATATCAATTCTCTGGATTTACATCGAAAAGCTATTAATCTCTCTCGGTCAAGA 419
|||||||||||||||||||||||| ||||| ||||| || || ||||||||||| |||||
Sbjct 360 TGTCCTCATATCAATTCTCTGGATATACATGGAAAAACTCTTGATCTCTCTCGGACAAGA 419
Query 420 CCCTGACATCTCCAGAGTCGCTGGCTCATACGCCTTGTGGCTCATACCGGCTTTGTTTGC 479
||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||
Sbjct 420 CCCTGACATCTCCAGAGTCGCTGGCTCCTACGCCTTGCGGCTCATACCGACTTTGTTTGC 479
Query 480 TCATGCGATTGTCATACCACTGACCCGGTTTCTACTAGCACAAGGGTTGGTTCTTCCCCT 539
|||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 480 CCATGCGATTGTCTTACCACTGACCCGGTTTCTGCTAGCACAAGGGTTGGTTCTTCCACT 539
Query 540 GCTCTACTCTGCACTGACCACCCTTTTGTTCCACATGGCGGTTTGCTGGACTTTGGTTTC 599
||| |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 540 GCTTTACTTTGCCCTGACCACCCTTTTGTTCCACATTGCGGTTTGCTGGACTTTGGTTTC 599
Query 600 CGCGCTTGGTCTGGGAAGCAATGGAGCTGCCCTAGCTATTAGTGTGTCTTTCTGGTTTTA 659
||| |||||| |||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct 600 CGCACTTGGTTTGGGAAGCAATGGAGCTGCCTTGGCTATTAGTGTGTCTTTCTGGTTTTT 659
Query 660 CGCTGTGATTCTCTCATGTTATGTGAGATCCTCCAGCTCTTGTGAGAAGACTCGCGGATT 719
|||| ||| ||||||||||||||||||| |||||||||||| |||||||||||| ||||
Sbjct 660 CGCTATGACACTCTCATGTTATGTGAGATTCTCCAGCTCTTGCGAGAAGACTCGCCGATT 719
Query 720 TGTATCCGGAGATATCGTGTCTTCTGTCAAGCAGTTCTTCCATTACGGAGTCCCATCAGC 779
||||||| |||| || |||||||||||||||||||||||| ||| ||||||||||||||
Sbjct 720 TGTATCCCAAGATTTCTTGTCTTCTGTCAAGCAGTTCTTCCGTTATGGAGTCCCATCAGC 779
Query 780 CGCAATGCTTTGCCTAGAATGGTGGCTATTTGAGCTACTTATACTCTGTTCAGGTCTTCT 839
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 780 GGCAATGCTTTGCCTAGAATGGTGGCTATTTGAGCTACTTATACTCTGTTCAGGTCTTCT 839
Query 840 CCCGAACCCAAAACTCGAGACCTCTGTTCTTTCTATTTGTCTTACAACAGCAACTTTGCA 899
|| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 840 CCAAAACCCAAAACTCGAGACCTCTGTTCTTTCAATTTGTCTTACAACAGCAACTTTGCA 899
Query 900 CTATGTGATTCCAGTTGGAGTCGCAGCGGCTGTTAGCACACGTGTGTCAAACAAATTGGG 959
|||||||||||||||||||||||| || ||||| |||||||| |||||||||||||||||
Sbjct 900 CTATGTGATTCCAGTTGGAGTCGCGGCCGCTGTGAGCACACGCGTGTCAAACAAATTGGG 959
Query 960 AGCTGGAAATCCTCAAGTTGCTAGGGTTTCAGTATTGGCAGGGCTTTGTCTCTGGCTGGT 1019
|||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 960 AGCTGGGATTCCTCAAGTTGCTAGGGTTTCAGTATTGGCAGGGCTTTGTCTCTGGCTTGT 1019
Query 1020 AGAGTCAGCTTTCTTTAGCACACTTCTCTTCACATGCAGGAACATCATAGGCTACGCATT 1079
||||||| |||||||||||| |||||||||| | | ||||||||||||||||||||||||
Sbjct 1020 AGAGTCATCTTTCTTTAGCATACTTCTCTTCGCCTTCAGGAACATCATAGGCTACGCATT 1079
Query 1080 CAGCAACAGCAAAGAAGTTGTGGACTATGTGGCTGACCTAACTCCTTTGCTCTGTCTCTC 1139
||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct 1080 CAGCAACAGTAAAGAAGTTGTGGACTATGTGGCTGATCTATCTCCTTTGCTCTGTCTCTC 1139
Query 1140 CTTTGTTCTCGACGGATTTACCGCAGTTCTTAATGGGGTTGCTAGGGGCA-GTGGTTGGC 1198
||||||||| |||||||||||||||||||||||||||||||| ||||| | |||||||||
Sbjct 1140 CTTTGTTCTTGACGGATTTACCGCAGTTCTTAATGGGGTTGCCAGGGG-ATGTGGTTGGC 1198
Query 1199 AGCACATTGGAGCTTTGAACAATGT-GTTAGCTTATTATATCGTAGGTGCCCCGGTTGGA 1257
| |||||||||||||||||||| || || |||||||||| ||||||| || |||||||||
Sbjct 1199 AACACATTGGAGCTTTGAACAACGTAGT-AGCTTATTATCTCGTAGGAGCTCCGGTTGGA 1257
Query 1258 GTTTACTTAGCTTTCAGTCGTGAGTTGAACGGAAAAGGACTTTGGTGTGGTGTTGTGGTT 1317
| || |||||||||||| |||||||||||||||||||||| ||||||||||| ||||||
Sbjct 1258 ATATATTTAGCTTTCAGTTGTGAGTTGAACGGAAAAGGACTATGGTGTGGTGTAGTGGTT 1317
Query 1318 GGATCCGCTGTGCAAGCCATTATACTGTCT-TTCGTCACATG-TTCCATAAATTGGAAGG 1375
||||||||||||||||||||||||||| || || ||||| | |||||| ||||||||||
Sbjct 1318 GGATCCGCTGTGCAAGCCATTATACTGGCTATT-GTCACG-GCTTCCATGAATTGGAAGG 1375
Query 1376 AACAGGCTGAGAAGGCTAGGAAGAGAATAATCTCAACTGAAAATGGATTGGCTTAA 1431
||||||| ||||||| ||||||||| ||||||||| |||||||||||||||||||
Sbjct 1376 AACAGGCCAAGAAGGCAAGGAAGAGACTAATCTCAAGTGAAAATGGATTGGCTTAA 1431
> AT2G04050.1 | Symbols: | MATE efflux family protein | chr2:1337386-1339270
REVERSE LENGTH=1431
Length=1431
Score = 1951 bits (1056), Expect = 0.0
Identities = 1310/1435 (91%), Gaps = 8/1435 (1%)
Strand=Plus/Plus
Query 1 ATGGAAGAGCCATTTCTTCCGGAAGATGAGCAGCTAGTCCCCTGTAAAGCCACATGGCAA 60
||||||||||| ||||||| | |||||||||| || ||||||||||||| ||||||| ||
Sbjct 1 ATGGAAGAGCCCTTTCTTCTGCAAGATGAGCACCTTGTCCCCTGTAAAGACACATGG-AA 59
Query 61 AA-TGGTCAGCTCAACGTCGAGCTGAAGAAAGTGAGCCGCTTGGCCGCTCCAATGGCCAC 119
|| ||||||| | | |||||||||||||||||||||| ||||||||||||| |||||| |
Sbjct 60 AAGTGGTCAGGTTACCGTCGAGCTGAAGAAAGTGAGCAGCTTGGCCGCTCCTATGGCCGC 119
Query 120 CGTGACCATTGCTCAGTACTTATTGCCTGTCATCTCAGTCATGGTCGCCGGTCACAACGG 179
||||||||||||||||||||||||||||||||| |||||||||||||| || ||||| ||
Sbjct 120 CGTGACCATTGCTCAGTACTTATTGCCTGTCATTTCAGTCATGGTCGCTGGCCACAATGG 179
Query 180 CGAGCTCCAGCTGTCCGGTGTCGCTCTTGCCACATCCTTCACAAACGTCTCCGGTTTCAG 239
||||||||||| ||||| ||||||||||| || |||||||||||||| ||||| |||||
Sbjct 180 TGAGCTCCAGCTCTCCGGCGTCGCTCTTGCAACCTCCTTCACAAACGTTTCCGGGTTCAG 239
Query 240 CATTATGTATGGGTTAGTGGGTGCACTAGAAACACTTTGTGGCCAAGCTTATGGAGCCAA 299
||| ||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct 240 TATTTTGTTTGGGTTAGCGGGTGCACTAGAAACTCTTTGTGGCCAAGCTTATGGAGCCAA 299
Query 300 ACAATACGAAAAACTCGGAACCTATACATACTCTGCAATTGCCTCTAACATCCCTATTTG 359
||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||| ||
Sbjct 300 ACAATACGAAAAAATCGGAACCTACACATACTCTGCAACTGCCTCTAACATCCCTATATG 359
Query 360 TGTCCTCATATCAATTCTCTGGATTTACATCGAAAAGCTATTAATCTCTCTCGGTCAAGA 419
||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 360 TGTCCTCATATCAGTTCTCTGGATTTACATCGAAAAGCTCTTAATCTCTCTCGGTCAAGA 419
Query 420 CCCTGACATCTCCAGAGTCGCTGGCTCATACGCCTTGTGGCTCATACCGGCTTTGTTTGC 479
|||||||||||| |||||||||||||| || |||||||||||||||||||||||||| ||
Sbjct 420 CCCTGACATCTCTAGAGTCGCTGGCTCCTATGCCTTGTGGCTCATACCGGCTTTGTTCGC 479
Query 480 TCATGCGATTGTCATACCACTGACCCGGTTTCTACTAGCACAAGGGTTGGTTCTTCCCCT 539
|||||| || |||| |||||||| |||||||| ||||||||||||||||||||||| ||
Sbjct 480 CCATGCGTTTTTCATCCCACTGACTCGGTTTCTGCTAGCACAAGGGTTGGTTCTTCCACT 539
Query 540 GCTCTACTCTGCACTGACCACCCTTTTGTTCCACATGGCGGTTTGCTGGACTTTGGTTTC 599
|||||||| | | |||||||| |||||||||||||| | ||||||||| |||| ||||
Sbjct 540 GCTCTACTGTACCCTGACCACTCTTTTGTTCCACATCCCTGTTTGCTGGGCTTTTGTTTA 599
Query 600 CGCGCTTGGTCTGGGAAGCAATGGAGCTGCCCTAGCTATTAGTGTGTCTTTCTGGTTTTA 659
|||| |||||||||||||||||||||||||| | ||||||||||||||||||||||| ||
Sbjct 600 CGCGTTTGGTCTGGGAAGCAATGGAGCTGCCATGGCTATTAGTGTGTCTTTCTGGTTCTA 659
Query 660 CGCTGTGATTCTCTCATGTTATGTGAGATCCTCCAGCTCTTGTGAGAAGACTCGCGGATT 719
| |||||||||||||||||||||||| | ||||||||| || || |||||||||| |||
Sbjct 660 TGTTGTGATTCTCTCATGTTATGTGAGGTACTCCAGCTCCTGCGACAAGACTCGCGTATT 719
Query 720 TGTATCCGGAGATATCGTGTCTTCTGTCAAGCAGTTCTTCCA-TTACGGAGTCCCATCAG 778
||||||| | ||| ||||||||| | |||||||||||||||| || ||||||||||||||
Sbjct 720 TGTATCCAGTGATTTCGTGTCTTGTATCAAGCAGTTCTTCCACTT-CGGAGTCCCATCAG 778
Query 779 CCGCAATGCTTTGCCTAGAATGGTGGCTATTTGAGCTACTTATACTCTGTTCAGGTCTTC 838
| |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 779 CGGCAATGGTTTGCCTAGAATGGTGGCTATTTGAGCTACTCATACTCTGTTCAGGTCTTC 838
Query 839 TCCCGAACCCAAAACTCGAGACCTCTGTTCTTTCTATTTGTCTTACAACAGCAACTTTGC 898
|||| ||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct 839 TCCCAAACCCGAAACTCGAGACCTCTGTTCTTTCAATTTGTCTTACAACAGCAAGTTTGC 898
Query 899 ACTATGTGATTCCAGTTGGAGTCGCAGCGGCTGTTAGCACACGTGTGTCAAACAAATTGG 958
||||||||||||||| ||||||||| |||||||| |||||||| ||||||||||||||||
Sbjct 899 ACTATGTGATTCCAGGTGGAGTCGCGGCGGCTGTGAGCACACGCGTGTCAAACAAATTGG 958
Query 959 GAGCTGGAAATCCTCAAGTTGCTAGGGTTTCAGTATTGGCAGGGCTTTGTCTCTGGCTGG 1018
||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 959 GAGCTGGGATTCCTCAAGTTGCTAGGGTTTCAGTATTGGCAGGGCTTTGTCTCTGGCTTG 1018
Query 1019 TAGAGTCAGCTTTCTTTAGCACACTTCTCTTCACATGCAGGAACATCATAGGCTACGCAT 1078
|||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||
Sbjct 1019 TAGAGTCAGCTTTCTTTAGCACACTTCTCTTCACATGCCGAAACATTATAGGCTACGCAT 1078
Query 1079 TCAGCAACAGCAAAGAAGTTGTGGACTATGTGGCTGACCTAACTCCTTTGCTCTGTCTCT 1138
||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct 1079 TCAGCAACAGCAAAGAAGTTGTGGACTATGTGGCTAACCTAACTCCTTTGCTCTGCCTCT 1138
Query 1139 CCTTTGTTCTCGACGGATTT-ACCGCAGTTCTTAATGGGGTTGCTAGGGGCAGTGGTTGG 1197
||||| | |||||||| ||| || |||||||| ||||||||||| ||||| |||||||||
Sbjct 1139 CCTTTATCCTCGACGG-TTTCACAGCAGTTCTGAATGGGGTTGCAAGGGGAAGTGGTTGG 1197
Query 1198 CAGCACATTGGAGCTTTGAACAATGTGTTAGCTTATTATATCGTAGGTGCCCCGGTTGGA 1257
|| |||||||||||||||||||| ||| ||||||||||| | ||||| || || ||||||
Sbjct 1198 CAACACATTGGAGCTTTGAACAACGTGGTAGCTTATTATCTTGTAGGAGCTCCTGTTGGA 1257
Query 1258 GTTTACTTAGCTTTCAGTCGTGAGTTGAACGGAAAAGGACTTTGGTGTGGTGTTGTGGTT 1317
|| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1258 GTATACTTAGCTTTCAATCGTGAGTTGAACGGAAAAGGACTTTGGTGTGGTGTTGTGGTC 1317
Query 1318 GGATCCGCTGTGCAAGCCATTATACTGTCTTTCGTCACATG-TTCCATAAATTGGAAGGA 1376
|||||||||||||||||||| ||| || |||| |||||| | ||||||||||||||||||
Sbjct 1318 GGATCCGCTGTGCAAGCCATAATATTGGCTTTTGTCACA-GCTTCCATAAATTGGAAGGA 1376
Query 1377 ACAGGCTGAGAAGGCTAGGAAGAGAATAATCTCAACTGAAAATGGATTGGCTTAA 1431
||||||||||||||||||||||||||| |||| | ||||||| |||||||||||
Sbjct 1377 ACAGGCTGAGAAGGCTAGGAAGAGAATGGTCTCTAGTGAAAATAGATTGGCTTAA 1431
> AT2G04080.1 | Symbols: | MATE efflux family protein | chr2:1357189-1359253
REVERSE LENGTH=1663
Length=1663
Score = 1757 bits (951), Expect = 0.0
Identities = 1280/1440 (89%), Gaps = 18/1440 (1%)
Strand=Plus/Plus
Query 1 ATGGAAGAGCCATTTCTTCCGGA-AGATGAGCAGCTAGTCCCCTGTAAAGCCACATGGCA 59
|||||||||||||||||||| || ||| |||||| ||||| | |||||| ||||||||||
Sbjct 95 ATGGAAGAGCCATTTCTTCC-GAGAGACGAGCAGTTAGTCTCTTGTAAATCCACATGGCA 153
Query 60 AAATGGTCAGCTCAACGTCGAGCTGAAGAAAGTGAGCCGCTTGGCCGCTCCAATGGCCAC 119
|| ||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 154 AAGTGGTCAGGTCACCGTCGAGCTGAAGAAAGTGAGCCGCTTGGCCGCTCCTATGGCCAC 213
Query 120 CGTGACCATTGCTCAGTACTTATTGCCTGTCATCTCAGTCATGGTCGCCGGTCACAACGG 179
||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct 214 CGTAACCATAGCTCAGTACTTATTGCCTGTCATCTCAGTCATGGTCGCCGGCCACATCGG 273
Query 180 CGAGCTCCAGCT-GTCCGGTGTCGCTCTTGCCACATCCTTCACAAACGTCTCCGGTTTCA 238
|||| | |||| | |||||||||| |||||||| || ||||||||||| ||||| ||||
Sbjct 274 CGAGTTGGAGCTCG-CCGGTGTCGCGCTTGCCACGTCTTTCACAAACGTTTCCGGCTTCA 332
Query 239 GCATTATGTATGGGTTAGTGGGTGCACTAGAAACACTTTGTGGCCAAGCTTATGGAGCCA 298
|||| |||| ||||||||| |||||| | ||||| |||||||||||||| ||||||| ||
Sbjct 333 GCATAATGTTTGGGTTAGTTGGTGCATTGGAAACTCTTTGTGGCCAAGCCTATGGAG-CA 391
Query 299 -AACAATACGAAAAACTCGGAACCTATACATACTCTGCAATTGCCTCTAACATCCCTATT 357
|||||||||||||| ||||||||||||||||||||||||| || || ||||| || |||
Sbjct 392 GAACAATACGAAAAAATCGGAACCTATACATACTCTGCAATGGCTTCCAACATACCAATT 451
Query 358 TGTGTCCTCATATCAATTCTCTGGATTTACATCGAAAAGCTATTAATCTCTCTCGGTCAA 417
||| || ||||||||||||| |||||||||||||||||||| || ||| ||||||| |||
Sbjct 452 TGTTTCATCATATCAATTCTATGGATTTACATCGAAAAGCTCTTGATCACTCTCGGGCAA 511
Query 418 GACCCTGACATCTCCAGAGTCGCTGGCTCATACGCCTTGTGGCTCATACCGGCTTTGTTT 477
|| ||||||||||| |||||||||||||| ||| | ||||||||| ||||||||||||||
Sbjct 512 GAGCCTGACATCTCTAGAGTCGCTGGCTCCTACTCATTGTGGCTCGTACCGGCTTTGTTT 571
Query 478 GCTCATGCGATTGTCATACCACTGACCCGGTTTCTACTAGCACAAGGGTTGGTTCTTCCC 537
|| ||||| ||| || |||||||||| |||||||| |||||||||||||||||| || ||
Sbjct 572 GCCCATGCTATTTTCTTACCACTGACTCGGTTTCTGCTAGCACAAGGGTTGGTTATTTCC 631
Query 538 CTGCTCTACTCTG-CACTGACCACCCTTTTGTTCCACATGGCGGTTTGCTGGACTTTGGT 596
||||| ||||||| || ||||||||||||||||||| || ||||||||||||||||||||
Sbjct 632 CTGCTATACTCTGCCA-TGACCACCCTTTTGTTCCATATTGCGGTTTGCTGGACTTTGGT 690
Query 597 TTCCGCGCTTGGTCTGGGAAGCAATGGAGCTGCCCTAGCTATTAGTGTGTCTTTCTGGTT 656
|| |||||||||||| ||||||||||||||||| | ||||||||| |||||||||||||
Sbjct 691 TTTCGCGCTTGGTCTTGGAAGCAATGGAGCTGCTATTGCTATTAGTTTGTCTTTCTGGTT 750
Query 657 TTACGCTGTGATTCTCTCATGTTATGTGAGATCCTCCAGCTCTTGTGAGAAGACTCGCGG 716
|||||||||||| ||||||||| ||||||||| | ||||||||| ||||||||||||||
Sbjct 751 TTACGCTGTGATACTCTCATGTCATGTGAGATTTTTCAGCTCTTGCGAGAAGACTCGCGG 810
Query 717 ATTTGTATCCGGA-GATATCGTGTCTTCTGTCAAGCAGTTCTTCCATTACGGAGTCCCAT 775
|||||||| | | ||| | ||||| | ||||||||| |||||| |||||||||||||
Sbjct 811 ATTTGTAT-CAAATGATTTTATGTCTAGTATCAAGCAGTACTTCCAGTACGGAGTCCCAT 869
Query 776 CAGCCGCAATGCTTTGCCTAGAATGGTGGCTATTTGAGCTACTTATACTCTGTTCAGGTC 835
| || | | || ||||| ||||||||||||| ||||||||||| |||||||| |||||||
Sbjct 870 CCGCTGGATTGATTTGCTTAGAATGGTGGCTGTTTGAGCTACTCATACTCTGCTCAGGTC 929
Query 836 TTCTCCCGAACCCAAAACTCGAGACCTCTGTTCTTTCTATTTGTCTTACAACAGCAACTT 895
||||||| ||||||||||||||||| ||||||||||| ||||||||||||| || |||||
Sbjct 930 TTCTCCCAAACCCAAAACTCGAGACATCTGTTCTTTCGATTTGTCTTACAATAGGAACTT 989
Query 896 TGCACTATGTGATTCCAGT-TGGAGTCGCAGCGGCTGTTAGCACACGTGTGTCAAACAAA 954
| ||||||||||||||| | ||||||||| |||||||| |||||||| ||||||||||||
Sbjct 990 TACACTATGTGATTCCA-TCTGGAGTCGCGGCGGCTGTGAGCACACGAGTGTCAAACAAA 1048
Query 955 TTGGGAGCTGGAAATCCTCAAGTTGCTAGGGTTTCAGTATTGGCAGGGCTTTGTCTCTGG 1014
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1049 TTGGGAGCTGGAAATCCTCAAGTTGCTAGGGTTTCCGTATTGGCAGGGCTTTGTCTCTGG 1108
Query 1015 CTGGTAGAGTCAGCTTTCTTTAGCACACTTCTCTTCACATGCAGGAACATCATAGGCTAC 1074
|| ||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||
Sbjct 1109 CTTGTAGAGTCAGCTTTCTTTAGCACACTTCTCTTCACCTGCCGAAACATCATAGGCTAC 1168
Query 1075 GCATTCAGCAACAGCAAAGAAGTTGTGGACTATGTGGCTGACCTAACTCCTTTGCTCTGT 1134
||||||||||||||||||||||||| |||||||| |||||| || ||||||||||||||
Sbjct 1169 ACATTCAGCAACAGCAAAGAAGTTGTTGACTATGTTGCTGACATATCTCCTTTGCTCTGT 1228
Query 1135 CTCTCCTTTGTTCTCGACGGATTTACCGCAGTTCTTAATGGGGTTGCTAGGGGCA-GTGG 1193
|||||||| | ||||||||||| || |||||||| ||||| || |||||||| | ||||
Sbjct 1229 CTCTCCTTCATCCTCGACGGATTAACGGCAGTTCTAAATGGAGTGGCTAGGGG-ATGTGG 1287
Query 1194 TTGGCAGCACATTGGAGCTTTGAACAATGTGTTAGCTTATTATATCGTAGGTGCCCCGGT 1253
||||| |||||||||||||||| ||| ||| | ||||||||| | ||||| || || ||
Sbjct 1288 GTGGCAACACATTGGAGCTTTGATCAACGTGGTGGCTTATTATCTTGTAGGAGCTCCTGT 1347
Query 1254 TGGAGTTTACTTAGCTTTCAGTCGTGAGTTGAACGGAAAAGGACTTTGGTGTGGTGTTGT 1313
||||||||||||||||||||||||||||| ||| ||||||||||| ||||| |||||| |
Sbjct 1348 TGGAGTTTACTTAGCTTTCAGTCGTGAGTGGAATGGAAAAGGACTCTGGTGCGGTGTTAT 1407
Query 1314 GGTTGGATCCGCTGTGCAAGCCA-TTATACTGTCTTTCGTCACATGT-TCCATAAATTGG 1371
|||||||||||| |||||||||| || ||||| || |||||||| | ||||| || |||
Sbjct 1408 GGTTGGATCCGCGGTGCAAGCCACTT-TACTGGCTATCGTCACA-GCCTCCATGAACTGG 1465
Query 1372 AAGGAACAGGCTGAGAAGGCTAGGAAGAGAATAATCTCAACTGAAAATGGATTGGCTTAA 1431
||||||||||||||||| || ||||||||||||||||| |||||||||||||||| ||||
Sbjct 1466 AAGGAACAGGCTGAGAAAGCAAGGAAGAGAATAATCTCTACTGAAAATGGATTGGTTTAA 1525
> AT2G04040.1 | Symbols: ATDTX1, TX1 | MATE efflux family protein
| chr2:1334512-1336489 REVERSE LENGTH=1542
Length=1542
Score = 1740 bits (942), Expect = 0.0
Identities = 1279/1442 (89%), Gaps = 22/1442 (2%)
Strand=Plus/Plus
Query 1 ATGGAAGAGCCATTTCTTCCGGA-AGATGAGCAGCTAGTCCCCTGTAAAGCCACATGGC- 58
||||| |||||||||||| | || ||| |||| |||||||| | | ||| ||||||||
Sbjct 10 ATGGAGGAGCCATTTCTT-CTGAGAGACGAGCTTCTAGTCCCTTCTCAAGTCACATGGCA 68
Query 59 -A-AAATGGTCAGCTCAA-CGTCGAGCTGAAGAAAGTGAGCCGCTTGGCCGCTCCAATGG 115
| |||| || | || ||||||||| |||| ||||||||||||||||||||| ||||
Sbjct 69 TACAAAT--CCA--TTAACCGTCGAGCTAAAGAGAGTGAGCCGCTTGGCCGCTCCTATGG 124
Query 116 CCACCGTGACCATTGCTCAGTACTTATTGCCTGTCATCTCAGTCATGGTCGCCGGTCACA 175
|||| ||||||||||||||||||||||||||||||||||| ||||||||||| || ||||
Sbjct 125 CCACTGTGACCATTGCTCAGTACTTATTGCCTGTCATCTCGGTCATGGTCGCTGGCCACA 184
Query 176 ACGGCGAGCTCCAGCTGTCCGGTGTCGCTCTTGCCACA-TCCTTCACAAACGTCTCCGGT 234
|||||||||||||||| |||||||||||||||| || | ||||||||||||||| |||||
Sbjct 185 ACGGCGAGCTCCAGCTCTCCGGTGTCGCTCTTG-CAAACTCCTTCACAAACGTCACCGGT 243
Query 235 TTCAGCATTATGTATGGGTTAGTGGGTGCACTAGAAACACTTTGTGGCCAAGCTTATGGA 294
|| |||||||||| ||| |||||||||||||| ||||| |||||||||||||||||||||
Sbjct 244 TTTAGCATTATGTGTGGATTAGTGGGTGCACTTGAAACTCTTTGTGGCCAAGCTTATGGA 303
Query 295 GCCAAACAATACGAAAAACTCGGAACCTATACATACTCTGCAATTGCCTCTAACATCCCT 354
||||||||||| |||||| ||||||| || |||||||||| ||||| || ||||| ||
Sbjct 304 GCCAAACAATATGAAAAAATCGGAACTTACGCATACTCTGCTATTGCTTCCAACATACCA 363
Query 355 ATTTGTGTCCTCATATCAATTCTCTGGATTTACATCGAAAAGCTATTAATCTCTCTCGGT 414
|||||| |||||||||||||||||||| |||||||||||||| | || || ||||||||
Sbjct 364 ATTTGTTTCCTCATATCAATTCTCTGGCTTTACATCGAAAAGATCTTGATTTCTCTCGGA 423
Query 415 CAAGACCCTGACATCTCCAGAGTCGCTGGCTCATACGCCTTGTGGCTCATACCGGCTTTG 474
||||||||||| || || ||| |||||||||| |||||||| ||||| |||||||||||
Sbjct 424 CAAGACCCTGAAATTTCAAGAATCGCTGGCTCCTACGCCTTTTGGCTTATACCGGCTTTA 483
Query 475 TTT-GCTCATGCGATTGTCATACCACTGACCCGGTTTCTACTAGCACAAGGGTTGGTTCT 533
||| || || |||||||||||||||||| |||||||||| ||| |||||||||||||| |
Sbjct 484 TTTGGC-CAAGCGATTGTCATACCACTGTCCCGGTTTCTGCTAACACAAGGGTTGGTTAT 542
Query 534 TCCCCTGCTCTACTCTGCAC-TGACCACCCTTTTGTTCCACATGGCGGTTTGCTGGACTT 592
||| ||||||| | |||| | |||||||||||||||||||| | |||||| |||||||
Sbjct 543 TCCTCTGCTCTTCACTGC-CGTGACCACCCTTTTGTTCCACGTTTTGGTTTGTTGGACTT 601
Query 593 TGGTTTCCGCGCTTGGTCTGGGAAGCAATGGAGCTGCCCTAGCTATTAGTGTGTCTTTCT 652
|||||| | | ||||||||||| | |||||| ||||| | |||| |||||||||||||
Sbjct 602 TGGTTTTCTTGTTTGGTCTGGGATGTAATGGACCTGCCATGGCTACAAGTGTGTCTTTCT 661
Query 653 GGTTTTACGCTGTGATTCTCTCATGTTATGTGAGATCCTCCAGCTCTTGTGAGAAGACTC 712
|||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||
Sbjct 662 GGTTTTACGCTGTGATACTCTCATGTTATGTGAGATTCTCCAGCTCTTGCGAGAAGACTC 721
Query 713 GCGGATTTGTATCCGGAGATATCGTGTCTTCTGTCAAGCAGTTCTTCCATTACGGAGTCC 772
|||||||||||||| ||||| | ||||||||| |||||||||||||||| |||||| |||
Sbjct 722 GCGGATTTGTATCCCGAGATTTTGTGTCTTCTATCAAGCAGTTCTTCCAATACGGAATCC 781
Query 773 CATCAGCCGCAATGCTTTGCCTAGAATGGTGGCTATTTGAGCTACTTATACTCTGTTCAG 832
||||||| |||||| |||| ||||||||||||||||||||| |||| |||||||| ||||
Sbjct 782 CATCAGCTGCAATGATTTGTCTAGAATGGTGGCTATTTGAGATACTCATACTCTGCTCAG 841
Query 833 GTCTTCTCCCGAACCCAAAACTCGAGACCTCTGTTCTTTCTATTTGTCTTACAACAGCAA 892
|||||||||| ||||| ||||||||||||||||||||||| ||||||||||||| || ||
Sbjct 842 GTCTTCTCCCTAACCCGAAACTCGAGACCTCTGTTCTTTCAATTTGTCTTACAATAGAAA 901
Query 893 CTTTGCACTATGTGATTCCAGTTGGAGTCGCAGCGGCTGTTAGCACACGTGTGTCAAACA 952
||||||||||||||||| ||| ||||||||| |||||||| ||||||||||| |||||||
Sbjct 902 CTTTGCACTATGTGATTTCAGCTGGAGTCGCCGCGGCTGTGAGCACACGTGTATCAAACA 961
Query 953 AATTGGGAGCTGGAAATCCTCAAGTTGCTAGGGTTTCAGTATTGGCAGGGCTTTGTCTCT 1012
| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 962 ATTTGGGAGCTGGGAATCCTCAAGTTGCTAGGGTTTCAGTATTAGCAGGGCTTTGTCTCT 1021
Query 1013 GGCTGGTAGAGTCAGCTTTCTTTAGCACACTTCTCTTCACATGCAGGAACATCATAGGCT 1072
|| | |||||||||||||||||||||| |||||| ||||| ||||||||||||||||| |
Sbjct 1022 GGATAGTAGAGTCAGCTTTCTTTAGCATACTTCTATTCACCTGCAGGAACATCATAGGAT 1081
Query 1073 ACGCATTCAGCAACAGCAAAGAAGTTGTGGACTATGTGGCTGACCTAACTCCTTTGCTCT 1132
|||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct 1082 ACGCATTCAGCAACAGCAAAGAAGTTTTGGACTATGTAGCTGACCTAACTCCTTTGCTCT 1141
Query 1133 GTCTCTCCTTTGTTCTCGACGGATTTACCGCAGTTCTTAATGGGGTTGCTAGGGGCAGTG 1192
| ||||||||| | |||||||| || || |||||||| ||||| ||||||||||| ||||
Sbjct 1142 GCCTCTCCTTTATCCTCGACGGCTTCACAGCAGTTCTAAATGGAGTTGCTAGGGGAAGTG 1201
Query 1193 GTTGGCAGCACATTGGAGCTTTGAACAAT-GTGTTAGCTTATTATATCGTAGGTGCCCCG 1251
||||||| ||||||||||||| ||||||| |||| |||||||| | ||||| || ||
Sbjct 1202 GTTGGCAACACATTGGAGCTTGGAACAATACTGTT-TCTTATTATCTTGTAGGAGCTCCT 1260
Query 1252 GTTGGAGTTTACTTAGCTTTCAGTCGTGAGTTGAACGGAAAAGGACTTTGGTGTGGTGTT 1311
|||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 1261 GTTGGAATTTACTTAGCTTTCAGTCGTGAGTTGAACGGAAAAGGACTGTGGTGCGGTGTT 1320
Query 1312 GTGGTTGGATCCGCTGTGCAAGCCATTATACTGTCT-TTCGTCACATG-TTCCATAAATT 1369
||||||||||| |||||||||||| ||||||| || || |||||| | |||||||||||
Sbjct 1321 GTGGTTGGATCTACTGTGCAAGCCACTATACTGGCTATT-GTCACA-GCTTCCATAAATT 1378
Query 1370 GGAAGGAACAGGCTGAGAAGGCTAGGAAGAGAATAATCTCAACTGAAAATGGATTGGCTT 1429
|||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||
Sbjct 1379 GGAAGGAACAGGCTGAGAAGGCAAGGAAGAGAATTGTCTCAACTGAAAACAGATTGGCTT 1438
Query 1430 AA 1431
||
Sbjct 1439 AA 1440
> AT2G14661.1 | Symbols: | Pseudogene of AT2G04040; ATDTX1; antiporter/
multidrug efflux pump/ multidrug transporter/ transporter
| chr2:6273315-6274037 REVERSE LENGTH=561
Length=561
Score = 691 bits (374), Expect = 0.0
Identities = 497/556 (89%), Gaps = 10/556 (2%)
Strand=Plus/Plus
Query 878 GTCTTACAACAGCAACTTTGCACTATGTGATTCCAGTTGGAGTCG-CAGCGGCTGTTAGC 936
||||||||| || ||||||||||||||||||| ||| |||||||| | || ||||| |||
Sbjct 11 GTCTTACAATAGAAACTTTGCACTATGTGATTTCAGCTGGAGTCGTC-GCCGCTGTGAGC 69
Query 937 ACACGTGTGTCAAACAAATTGGGAGCTGGAAATCCTCAAGTTGCTAGGGTTTCAGTATTG 996
|||||||| |||||||| ||||||| ||| |||||||||||||||||||| ||||||||
Sbjct 70 ACACGTGTATCAAACAATTTGGGAGTTGGGAATCCTCAAGTTGCTAGGGTCTCAGTATTA 129
Query 997 GCAGGGCTTTGTCTCTGGCTGGTAGAGTCAGCTTTCTTTAGCACACTTCTCTTCACATGC 1056
||| |||||||||||||| | |||||||||||||||||||||| |||||| ||||| |||
Sbjct 130 GCAAGGCTTTGTCTCTGGATAGTAGAGTCAGCTTTCTTTAGCATACTTCTATTCACCTGC 189
Query 1057 AGGAACATCATAGGCTACGCATTCAGCAACAGCAAAGAAGTTGTGGACTATGTGGCTGAC 1116
|||||||||||||| ||||||||||||||||||||||||||| |||||||||| || |||
Sbjct 190 AGGAACATCATAGGATACGCATTCAGCAACAGCAAAGAAGTTTTGGACTATGTCGCCGAC 249
Query 1117 CTAACTCCTTTGCTCTGTCTCTCCTTTGTTCTCGACGGATTTACCGCAGTTCTTAATGGG 1176
||||||||||||||||| ||||||||| | |||||||| ||||| |||||||||||||||
Sbjct 250 CTAACTCCTTTGCTCTGCCTCTCCTTTATCCTCGACGGCTTTACAGCAGTTCTTAATGGG 309
Query 1177 GTTGCTAGGGGCAGTGGTTGGCAGCACATTGGAGCTTTGAACAAT-GTGTTAGCTTATTA 1235
|||||||||| ||||||||||| ||||||||||||| ||||||| |||| |||||||
Sbjct 310 ATTGCTAGGGGAAGTGGTTGGCAACACATTGGAGCTTGGAACAATACTGTT-TCTTATTA 368
Query 1236 TATCGTAGGTGCCCCGGTTGGAGTTTACTTAGCTTTCAGTCGTGAGTTGAACGGAAAAGG 1295
| ||||| | || || ||||| |||||||||||||||||||||||||||||||||||||
Sbjct 369 TCTCGTATGAGCTCCTCTTGGAATTTACTTAGCTTTCAGTCGTGAGTTGAACGGAAAAGG 428
Query 1296 ACTT-TGGTGTGGTGTTGTGGTTGGATCCGCTGTGCAAGCCATTATACTGTCT-TTCGTC 1353
| || ||||| ||||||||||||||||| |||||||||||| ||||||| || || |||
Sbjct 429 A-TTGTGGTGCGGTGTTGTGGTTGGATCTACTGTGCAAGCCACTATACTGGCTATT-GTC 486
Query 1354 ACATG-TTCCATAAATTGGAAGGAACAGGCTGAGAAGGCTAGGAAGAGAATAATCTCAAC 1412
||| | ||||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct 487 ACA-GCTTCCATAAATTGGAAGGAACAGGCTGAGAAGGCAAGGAAGAGAATTGTCTCAAC 545
Query 1413 TGAAAATGGATTGGCT 1428
||||||| ||||||||
Sbjct 546 TGAAAATAGATTGGCT 561
> AT2G04066.1 | Symbols: | MATE efflux family protein | chr2:1352887-1353517
REVERSE LENGTH=516
Length=516
Score = 492 bits (266), Expect = 4e-138
Identities = 363/410 (89%), Gaps = 6/410 (1%)
Strand=Plus/Plus
Query 1025 CAGCTTTCTTTAGCACACTTCTCTTCACATGCAGGAACATCATAGGCTACGCATTCAGCA 1084
|||||||||||||||||||||||||||| ||| | ||||||||||||||| |||||||||
Sbjct 110 CAGCTTTCTTTAGCACACTTCTCTTCACCTGCCGAAACATCATAGGCTACACATTCAGCA 169
Query 1085 ACAGCAAAGAAGTTGTGGACTATGTGGCTGACCTAACTCCTTTGCTCTGTCTCTCCTTTG 1144
|||||||||||||||| |||||||| |||||| || ||||||||||||||||||||||
Sbjct 170 ACAGCAAAGAAGTTGTTGACTATGTTGCTGACATATCTCCTTTGCTCTGTCTCTCCTTCA 229
Query 1145 TTCTCGACGGATTTACCGCAGTTCTTAATGGGGTTGCTAGGGGCA-GTGGTTGGCAGCAC 1203
| ||||||||||| || |||||||| ||||| || |||||||| | |||| ||||| |||
Sbjct 230 TCCTCGACGGATTAACGGCAGTTCTAAATGGAGTGGCTAGGGG-ATGTGGGTGGCAACAC 288
Query 1204 ATTGGAGCTTTGAACAATGTGTTAGCTTATTATATCGTAGGTGCCCCGGTTGGAGTTTAC 1263
||||||||||||| ||| ||| | ||||||||| | ||||| || || ||||||||||||
Sbjct 289 ATTGGAGCTTTGATCAACGTGGTGGCTTATTATCTTGTAGGAGCTCCTGTTGGAGTTTAC 348
Query 1264 TTAGCTTTCAGTCGTGAGTTGAACGGAAAAGGACTTTGGTGTGGTGTTGTGGTTGGATCC 1323
||||||||||||||||||| ||| ||||||||||| ||||| |||||| |||||||||||
Sbjct 349 TTAGCTTTCAGTCGTGAGTGGAATGGAAAAGGACTCTGGTGCGGTGTTATGGTTGGATCC 408
Query 1324 GCTGTGCAAGCCA-TTATACTGTCTTTCGTCACATGT-TCCATAAATTGGAAGGAACAGG 1381
|| |||||||||| || ||||| || |||||||| | ||||| || |||||||||||||
Sbjct 409 GCGGTGCAAGCCACTT-TACTGGCTATCGTCACA-GCCTCCATGAACTGGAAGGAACAGG 466
Query 1382 CTGAGAAGGCTAGGAAGAGAATAATCTCAACTGAAAATGGATTGGCTTAA 1431
|||||||||| ||||||||||||||||||||| |||||||||||| ||||
Sbjct 467 CTGAGAAGGCAAGGAAGAGAATAATCTCAACTAAAAATGGATTGGTTTAA 516
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 70531765725
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5