BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg319280
Length=1962
Score E
Sequences producing significant alignments: (Bits) Value
AT2G04750.1 | Symbols: | Actin binding Calponin homology (CH) ... 3099 0.0
AT5G35700.1 | Symbols: FIM2, FIM5 | fimbrin-like protein 2 | ch... 1646 0.0
> AT2G04750.1 | Symbols: | Actin binding Calponin homology (CH)
domain-containing protein | chr2:1659762-1662748 REVERSE LENGTH=1959
Length=1959
Score = 3099 bits (1678), Expect = 0.0
Identities = 1872/1966 (95%), Gaps = 11/1966 (1%)
Strand=Plus/Plus
Query 1 ATGTCTAGTTACGTTGGTGTTCTTGTCTCTGATCCATGGCTACAGAGCCAATTCACACAA 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1 ATGTCTAGTTACGTTGGTGTTCTTGTCTCTGATCCATGGCTACAAAGCCAATTCACACAA 60
Query 61 GTGGAGTTACGCACTCTTAAATCCAAGTTTTATTCGACAAAAACTCGATTTGGTCGTGTT 120
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 61 GTGGAGTTACGCACTCTTAAATCCAAGTTTTATTCGACAAAAACTCGATTCGGTCGTGTC 120
Query 121 ACTGTGAAACATTTACCACCAGTGTTAGCAAAATTGAAAGATTTCAGTGGCAAGTTTGAT 180
|||||||||||||||||||||||||| ||||| |||||| |||||| |||||||||||||
Sbjct 121 ACTGTGAAACATTTACCACCAGTGTTTGCAAAGTTGAAATATTTCAATGGCAAGTTTGAT 180
Query 181 GAAAATGAGATCAAAACTATATTGGATGAGTCTTACCCCAATCGCGCTAAGGAAGTTGAG 240
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 181 GAAAATGAGATCAAAACTATATTGGATGAGTCTTATCCCAATCGCGCTAAGGAAGTTGAA 240
Query 241 TTCGAGACCTTTCTTCGGGCCTTTTTAAGTGTGCAATCCCGAGGATCAAAAGGCGCTTCA 300
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 TTCGAAACCTTTCTCCGGGCCTTTTTAAGTGTGCAATCCCGAGGATCAAAAGGCGCTTCA 300
Query 301 TCGTTTCTCAAGAC-AGGAGCTACAACGTTCCATCA-TGCGATCAATGAATCCGAGAAAG 358
|||||||||||||| || | |||||||||||||||| | |||| || |||||||||||||
Sbjct 301 TCGTTTCTCAAGACAAGTA-CTACAACGTTCCATCACT-CGATAAACGAATCCGAGAAAG 358
Query 359 CTTCCTATGTGTCCCATATCAATAGTTATTTGAAAGAAGAACCTCTCTTGAAGAGCTATC 418
|||| |||||||| ||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct 359 CTTCATATGTGTCACATATCAATAGTTATTTGAAAGATGAACCTAACTTGAAGAGCTATC 418
Query 419 TTCCAATCAATCCTGCTACAAATGCTTTGTTTGATCTTGTTAAAGATGGTGTTCTTCTGT 478
|||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 419 TTCCAATCAACCCTACTACAAATGCTTTGTTTGATCTTGTTAAAGATGGTGTTCTTTTGT 478
Query 479 GTAAGCTTATAAACATAGCTGTGCCTGGGACGATAGACGAAAGAGCGATAAACACGAAGA 538
|||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||
Sbjct 479 GTAAGCTTATAAACATCGCTGTGCCTGGGACTATAGACGAAAGAGCGATAAACACAAAGA 538
Query 539 CAGAACTTAATCCATGGGAGAGAACTGAAAATCTTTCACTCTGTCTCAACTCGGCTAAGG 598
|||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||
Sbjct 539 AAGAACTTAATCCATGGGAAAGAACTGAAAATCTTTCACTATGTCTCAACTCTGCTAAGG 598
Query 599 CGATAGGCTGCACCGTCGTCAACATTGGAACTCAGGACATTGCTGAAGGAACACCCCATC 658
| || |||||||| || |||||||||||||||||||||||||||||||||||||| ||||
Sbjct 599 CAATTGGCTGCACTGTAGTCAACATTGGAACTCAGGACATTGCTGAAGGAACACCACATC 658
Query 659 TTGTACTTGGGTTGATCTTTCAGATTATAAAGATCCAATTGCTGGCTGATCTCAATCTTA 718
||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 659 TTGTACTAGGGTTGATCTTTCAGATTATAAAGATCCAATTGTTGGCTGATCTCAATCTTA 718
Query 719 AGAAAACTCCACAACTTGTTGAGTTGGTGGAAGAAAACCAGGATGTGGAGGAGCTTATGG 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 719 AGAAAACTCCACAACTTGTTGAGTTGGTGGAAGAAAACCAGGATGTGGAGGAGCTTATGG 778
Query 779 GACTAGCTCCTGAGAAACTTTTGCTAAAATGGATGAATTTTCATCTCAAGAAAGCTGGTT 838
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 779 GACTAGCTCCTGAGAAACTTTTGCTAAAATGGATGAATTTTCATCTTAAGAAAGCTGGTT 838
Query 839 ATGAGAAACAAGTAACCAATTTCTCTTCTGATGTTAAGGATGGAGAAGCATATGCATACC 898
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 839 ATGAGAAACAAGTAACCAATTTCTCTTCTGATGTTAAGGATGGAGAGGCATATGCATACC 898
Query 899 TGCTCAATGCTCTAGCACCAGAACACAGCACACATGTGACATTAGAGATCAAAGACCCTT 958
||||||||||| |||| ||||||||||| ||| |||| ||||||||||| ||||||||||
Sbjct 899 TGCTCAATGCTTTAGCTCCAGAACACAGTACAAATGTCACATTAGAGATTAAAGACCCTT 958
Query 959 CAGAAAGAGCGATGAAGGTTCTTGAGCAAGCAGAGAAGCTGGATTGTAAAAGATTCCTTT 1018
|||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 959 CAGAAAGAGCGACGAAGGTTCTTGAGCAAGCAGAGAAGCTGGACTGTAAAAGATTCCTTT 1018
Query 1019 CTCCTAAAGATATAGTTGAAGGCTCTGCAAATCTTAATCTTGCATTTGTGGCACAACTGT 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1019 CTCCTAAAGATATAGTTGAAGGCTCTGCAAATCTTAATCTTGCATTTGTGGCACAACTGT 1078
Query 1079 TTCACCACAGGAATGGGTTGTCTGATGAGAGTTCAAAGGGGCCTGTCTCTGTTACTGAGA 1138
|||||||||||||||| ||||||||||||||| |||||| |||| |||||||| ||||||
Sbjct 1079 TTCACCACAGGAATGGATTGTCTGATGAGAGTCCAAAGGTGCCTATCTCTGTTGCTGAGA 1138
Query 1139 TGGTCACAGAAGATGATGAAACTTCTCGAGAAGAACGATGCTTTCGCCATTGGATGAACA 1198
|||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1139 TGGTCACAGAAGATGAAGAAACTTCTCGAGAAGAAAGATGCTTTCGCCATTGGATGAACA 1198
Query 1199 GTCTTGGTGCTGTGACTTATGTCGATAATGTTTTCGAGGATGTTAGAAATGGATGGGTTC 1258
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1199 GTCTCGGTGCTGTGACTTATGTCGATAATGTTTTCGAGGATGTTAGAAATGGATGGGTTC 1258
Query 1259 TTCTTGAAGTTCTTGACAAAGTATCGCCAGGCTCGGTCAACTGGAAGCACGCGAATAAAC 1318
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1259 TTCTTGAAGTTCTTGACAAAGTATCACCAGGCTCGGTCAACTGGAAGCACGCGAATAAAC 1318
Query 1319 CTCCTATCAAAATGCCATTCAAGAAGGTTGAGAACTGTAACCAAGTTATCAAGATTGGGA 1378
|||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1319 CTCCCATTAAAATGCCATTCAAGAAGGTTGAGAATTGTAACCAAGTTATCAAGATTGGGA 1378
Query 1379 AAGAATTGAACTTCTCGCTTGTCAATGTAGCTGGCCATGACATTGTGCAAGGAAACAAGA 1438
|||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct 1379 AAGAATTGAACTTCTCGCTTGTCAATGTAGCTGGTCATGACATTATGCAAGGAAACAAGA 1438
Query 1439 AGCTCCTTCTCGCTTTTTTGTGGCAATTGATGAGATACACAATGCTCCAAATCCTGAACA 1498
|||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1439 AGCTACTTCTCGCTTTTTTGTGGCAGTTGATGAGATACACAATGCTCCAAATCCTGAACA 1498
Query 1499 ACTTGAGATCTCACTGGCAAGGTAGAGATATTACAGAGGCAGATATTCTGAACTGGGCAA 1558
||||||| |||||||| ||||||| |||||| ||||||||||||||||| ||||||||||
Sbjct 1499 ACTTGAGGTCTCACTGCCAAGGTAAAGATATCACAGAGGCAGATATTCTAAACTGGGCAA 1558
Query 1559 ATAGGAAAGTCAAGAAATCG-GGTCGACCCTCTCAAGCAGTGAGCTTCAAGGACAAGAAT 1617
||||||||||||||||| | |||||| |||||||||| |||||||||||||||||||||
Sbjct 1559 ATAGGAAAGTCAAGAAAA-GTGGTCGAACCTCTCAAGCTGTGAGCTTCAAGGACAAGAAT 1617
Query 1618 CTGGCAAATGGAATCTTCTTTTTGGAGCTTTTGAGTGCCGTAGAGCCAAGAGTTGTAAAC 1677
||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 1618 CTGGCAAATGGAATCTTCTTTTTAGAGCTTTTGAGTGCTGTAGAGCCAAGAGTTGTAAAC 1677
Query 1678 TGGAGTCTTGTCTCCAAAGGAGAAACAGCAGAAGAGGAAAAGAATTTGAATGCAACATAC 1737
||||||||||| ||||||||||||||| || | |||||||||||||||||||||||||||
Sbjct 1678 TGGAGTCTTGTATCCAAAGGAGAAACA-CA-A-GAGGAAAAGAATTTGAATGCAACATAC 1734
Query 1738 ATCATAAGTGTTGCAAGGAAGCTCGGATGCTCAATCTTCTTGTTGCCTGAAGATATTTTA 1797
||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||
Sbjct 1735 ATCATAAGTGTTGCAAGGAAGCTTGGATGCTCAATCTTCTTGCTGCCTGAGGATATTTTA 1794
Query 1798 GAGGTAAATCAGAAGA-TGATGCTTATATTAGCTGCTAGCATCATGAACTGGAGCCTTCA 1856
|||||||| |||| || |||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1795 GAGGTAAACCAGA-GAATGATGCTTATATTAGCTGCTAGTATCATGAACTGGAGCCTTCA 1853
Query 1857 GCAACAATCAGACACCGAGTCTACTGTCTCGGATGATACTGACGTAAGCTCTGTGACAGA 1916
||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||
Sbjct 1854 GCAACAATCAGACACTGAATCTACTGTCTCGGATGATACTGACGTAAGCTCTGTGACCGA 1913
Query 1917 AGAGATCTCCAATTTGTCCACAGACGATGGATCTTCAGATGTCTAA 1962
|||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct 1914 AGAGATCTCCAATTTGTCGACAGACGATGGATCTTCAGATGTTTAA 1959
> AT5G35700.1 | Symbols: FIM2, FIM5 | fimbrin-like protein 2 |
chr5:13872535-13876857 REVERSE LENGTH=2568
Length=2568
Score = 1646 bits (891), Expect = 0.0
Identities = 1596/1929 (83%), Gaps = 77/1929 (4%)
Strand=Plus/Plus
Query 1 ATGTCTAGTTACGTTGGTGTTCTTGTCTCTGATCCATGGCTACAGAGCCAATTCACACAA 60
||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||
Sbjct 207 ATGTCTAGTTACGTTGGTGTTCTTGTCTCTGATCCTTGGTTACAGAGCCAATTTACACAA 266
Query 61 GTGGAGTTACGCACTCTTAAATCCAAGTTT-TATTCGA-CAAAAACTCGATTTGGTCGTG 118
||||| || || || |||||||| |||||| | ||||| ||||| ||| ||| || |||
Sbjct 267 GTGGAATTGCGTACCCTTAAATCTAAGTTTGT-TTCGAACAAAA-CTCAATTAGGACGT- 323
Query 119 TT-ACTGT-GAAACATTTACCACCAGTGTTAGCAAAA-TTGAAAGATTTCAGTGGCAAGT 175
|| ||||| | | |||||||||| || || | |||| ||||||| ||| | || |
Sbjct 324 TTCACTGTCGGAG-ATTTACCACCTGTTTTCG-AAAAGTTGAAAGCTTTTAACGGTACCA 381
Query 176 TTGATGAAAATGAGATCAAAACTATATTGGATGAGTCTTACCCCAATCGC-GCTAAGGAA 234
||||||| ||||||||||| || ||||||| ||||||| |||||| || | | | |||
Sbjct 382 TTGATGAGGATGAGATCAAATCTGTATTGGACAAGTCTTATCCCAAT-GCTGATGATGAA 440
Query 235 GTTGAGTTCGAGACCTTTCTTCGGGCCTTTTTAAGTGTGCAATCCCGAGGA-TC-A-AAA 291
|| || || ||| |||||||||||||||||||||||||||| | |||||| | | |||
Sbjct 441 GTCGATTTTGAGTTCTTTCTTCGGGCCTTTTTAAGTGTGCAAGCACGAGGAGTTGAGAAA 500
Query 292 ---GG-----C----G---CTTCATCGTTTCTCAAGAC-AGGAGCTACAACGTTCCATCA 335
|| | | |||| || || ||||| || || | |||||||| | || ||
Sbjct 501 TCAGGAGGGTCAAAAGGTGCTTCTTCATTCCTCAAAACCAGTA-CTACAACGGTGCACCA 559
Query 336 TGCGATCAATGAATCCGAGAAAGCTTCCTATGTGTCCCATATCAATAGTTATTTGAAAGA 395
||||||||||||||||||||| ||||| ||||| || ||| | |||| ||| |||| |||
Sbjct 560 TGCGATCAATGAATCCGAGAAGGCTTCTTATGTTTCGCATGTTAATAATTACTTGAGAGA 619
Query 396 AGAACCTCTCTTGAAGAGCTATCTTCCAATCAATCCTGCTACAAATGCTTTGTTTGATCT 455
|| ||| ||||||||||||||||||| || |||| || ||||||||||| ||||||||
Sbjct 620 TGATCCTTTCTTGAAGAGCTATCTTCCTATTGATCCCGCAACAAATGCTTTCTTTGATCT 679
Query 456 TGTTAAAGATGGTGTTCTTCTGTGTAAGCTTATAAACATAGCTGTGCCTGGGACGATAGA 515
||||||||||||||||||| |||||||||||||||| | ||||| |||||||| || ||
Sbjct 680 TGTTAAAGATGGTGTTCTTTTGTGTAAGCTTATAAATGTTGCTGTTCCTGGGACCATCGA 739
Query 516 CGAAAGAGCGATAAACACGAAGACAGAAC--TTAATCCATGGGAGAG-AACTGAAAATCT 572
|||| |||| || ||||| |||| | ||| |||| ||||||||||| || ||| || ||
Sbjct 740 CGAACGAGCTATCAACACAAAGA-A-AACGCTTAACCCATGGGAGAGGAA-TGAGAACCT 796
Query 573 TTCACTCT-G-TCTCAACTCGGCTAAGGCGATAGGCTGCACCGTCGTCAACATTGGAACT 630
| ||| | | |||||| || || || || || |||||||| || ||||||||||||||
Sbjct 797 T--ACTTTAGGTCTCAATTCTGCCAAAGCTATTGGCTGCACAGTGGTCAACATTGGAACA 854
Query 631 CAGGACATTGCTGAAGGAACACCCCATCTTGTACTTGGGTTGATCTTTCAGATTATAAAG 690
|||||||| |||||||||| ||| |||| |||||||||||||| | |||||||||||||
Sbjct 855 CAGGACATAGCTGAAGGAAGACCATATCTCGTACTTGGGTTGATATCTCAGATTATAAAG 914
Query 691 ATCCAATTGCTGGCTGATCTCAATCTTAAGAAAACTCCA-CAACTTGTTGAGTTGGTGGA 749
|||||| || |||||||||||||| ||||||||||||| | ||| || | |||||||
Sbjct 915 ATCCAAATGTTGGCTGATCTCAATTTTAAGAAAACTCCTTCG-CTTTTTCAACTGGTGGA 973
Query 750 AGAAAAC-CAGGATGTGGAGGAGCTTATGGGACTAGCTCCTGAGAAACTTTTGCTAAAAT 808
|| | | ||||||| |||||||| |||||| | |||||||| ||| ||||||||||||
Sbjct 974 CGACA-CTCAGGATGCAGAGGAGCTCATGGGATTGGCTCCTGAAAAAGTTTTGCTAAAAT 1032
Query 809 GGATGAATTTTCATCTCAAGAAAGCTGGTTATGAGAAA-CAAGTAACCAATTTCTCTTCT 867
|||||||||| ||||| ||||||||||||||||| ||| || || || ||||| ||||||
Sbjct 1033 GGATGAATTTCCATCTGAAGAAAGCTGGTTATGA-AAAGCAGGTTACGAATTTTTCTTCT 1091
Query 868 GATGTT-AAGGATGGAGAAGCATATGCATACCTGCTCAATGCTCTAGCACCAGAACACAG 926
||| || ||||| || || |||||||| |||||||| ||||| || || |||||||||||
Sbjct 1092 GAT-TTGAAGGACGGTGAGGCATATGCGTACCTGCTTAATGCCCTTGCTCCAGAACACAG 1150
Query 927 CACACATGTGACATTAGAGATCAAAGACCCTTCAGAAAGAGCGATGAAGGTTCTTGAGCA 986
||||||||| ||||||||| ||||||||| |||||||||||| ||||||||||||||
Sbjct 1151 TACACATGTGGCATTAGAGACCAAAGACCCCACAGAAAGAGCGAAAAAGGTTCTTGAGCA 1210
Query 987 AGCAGAGAAGCTGGATTGTAAAAGATTCCTTTCTCCTAAAGATATAGTTGAAGGCTCTGC 1046
|| |||||||||||||||||| ||| ||||||||| ||||| ||||| || ||||| ||
Sbjct 1211 GGCTGAGAAGCTGGATTGTAAACGATACCTTTCTCCCAAAGACATAGTGGACGGCTCAGC 1270
Query 1047 AAATCTTAATCTTGCATTTGTGGCACAACTGTTTCACCACAGGAATGGGTTGTCTGATGA 1106
||||||||| |||||||||||||| ||| | ||||| ||||||||||| ||| ||| |||
Sbjct 1271 AAATCTTAACCTTGCATTTGTGGCGCAAATATTTCAGCACAGGAATGGATTGACTGTTGA 1330
Query 1107 -GAGTTCAAAGGGGCCTGTCTCTGTTACTGAGATGGTCACAGAAGATGATG-AAACTTCT 1164
|| ||||||| | | | | || |||||||| | ||||| |||| || |||||||
Sbjct 1331 CGA-TTCAAAGA--CAT--CA-T-TTGCTGAGATGATGACAGATGATG-TGGAAACTTCA 1382
Query 1165 CGAGAAGAACGATGCTTTC-GCCAT-TGGATGAACAGTCTTGGTGCTGTGACTTATGTCG 1222
||||||||| |||| |||| ||| | ||||| ||||||||||| | | |||||||||
Sbjct 1383 CGAGAAGAAAGATG-TTTCCGCC-TCTGGATTAACAGTCTTGGCACAGCCACTTATGTCA 1440
Query 1223 ATAATGTTTTCGAGGATGTTAGAAATGGATGGGTTCTTCTTGAAGTTCTTGACAAAGTAT 1282
|||||||||| |||||| |||| ||||| |||||||||||||||||||| |||||||| |
Sbjct 1441 ATAATGTTTTTGAGGATCTTAGGAATGGGTGGGTTCTTCTTGAAGTTCTCGACAAAGTTT 1500
Query 1283 CGCCAGGCTCGGTCAACTGGAAGCACGCGAATAAACCTCCTATCAAAATGCCATTCAAGA 1342
| || ||||||||||||||||| ||||| ||||||||||| || |||||||||||||| |
Sbjct 1501 CACCTGGCTCGGTCAACTGGAAACACGCAAATAAACCTCCCATAAAAATGCCATTCAAAA 1560
Query 1343 AGGTTGAGAACTGTAACCAAGTTATCAAGATTGGGAAAGAATTGAACTTCTCGCTTGTCA 1402
||||||||||||| || ||||||| ||||||||||| ||| || ||| || |||||||
Sbjct 1561 AGGTTGAGAACTGCAATGAAGTTATAAAGATTGGGAAGGAACTGCGCTTTTCCCTTGTCA 1620
Query 1403 ATGTAGCTGGCCATGACATTGTGCAAGGAAACAAGAAGCTCCTTCTCGCTTTTTTGTGGC 1462
|||||||||| ||||||||||||||||||| ||||| || |||||||| ||||||||||
Sbjct 1621 ATGTAGCTGGGAATGACATTGTGCAAGGAAATAAGAAACTTCTTCTCGCATTTTTGTGGC 1680
Query 1463 AATTGATGAGATACACAATGCTCCAAATCCTGAACAACTTGAGATCTCACTGGCAAGGTA 1522
|| | |||||||| |||||||||||| | |||| ||||||||||| |||| ||||||||
Sbjct 1681 AACTAATGAGATATACAATGCTCCAACTTCTGAGGAACTTGAGATCACACTCGCAAGGTA 1740
Query 1523 GAGATATTACAGAGGCAGATATTCTGAACTGGGCAAATAGGAAAGTCAAGAAATCG-GGT 1581
||| |||||||| ||||||||||| |||||||| ||||||||||| |||| | | ||
Sbjct 1741 AAGAAATTACAGATGCAGATATTCTTAACTGGGCGAATAGGAAAGTGAAGAGAG-GTGGC 1799
Query 1582 CGACCCTC-TCAAGCAG-TGAGCTTCAAGGACAAGAATCTGGCAAATGGAATCTTCTTTT 1639
||| | | ||| || | | ||||||| ||||||||||||| | | |||||| ||||||
Sbjct 1800 CGAAC-TAGTCAGGCTGAT-AGCTTCAGGGACAAGAATCTGTCTAGTGGAATGTTCTTTC 1857
Query 1640 TGGAGCTT-TTGAGTGCCGTAGAGCCAAGAGTTGTAAACTGGAGTCTTGTCT-CCAAAGG 1697
|||| ||| || ||||| ||||||||||||||||| |||||||| || || | |||| ||
Sbjct 1858 TGGAACTTCTT-AGTGCGGTAGAGCCAAGAGTTGTCAACTGGAGCCTCGT-TACCAATGG 1915
Query 1698 AGAAACAGCAGAAGAGGAAAAGAATTTGAATGCAACATACATCATAAGTGTTGCAAGGAA 1757
|||||||| || ||||| ||||| |||||||| ||||||||||| ||||||||| | ||
Sbjct 1916 AGAAACAG-AG--GAGGATAAGAAGTTGAATGCCACATACATCATCAGTGTTGCACGAAA 1972
Query 1758 GCTCGGATGCTCAATCTTCTTGTTGCCTGAAGATATTTTAGAGGTAAATCAGAAGATGAT 1817
||| ||||| || || |||||||||||||||||||| ||||||| || |||||||||||
Sbjct 1973 GCTTGGATGTTCCATATTCTTGTTGCCTGAAGATATCATAGAGGTGAACCAGAAGATGAT 2032
Query 1818 GCTTATATTAGCTGCTAGCATCATGAACTGGAGCCTTCAGCAACAATCAGACACCGAGTC 1877
|||||| || || || ||||||||| |||||||||| || |||||||||||||| |||||
Sbjct 2033 GCTTATCTTGGCAGCCAGCATCATGTACTGGAGCCTCCAACAACAATCAGACACAGAGTC 2092
Query 1878 TACTGTCTC 1886
|||||||||
Sbjct 2093 TACTGTCTC 2101
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 97188255120
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5