BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg319356
Length=1524
Score E
Sequences producing significant alignments: (Bits) Value
AT1G22400.1 | Symbols: UGT85A1, ATUGT85A1 | UDP-Glycosyltransfe... 1195 0.0
AT1G22380.1 | Symbols: AtUGT85A3, UGT85A3 | UDP-glucosyl transf... 1175 0.0
AT1G22360.1 | Symbols: AtUGT85A2, UGT85A2 | UDP-glucosyl transf... 1064 0.0
ATCG01180.1 | Symbols: RRN23S.2 | chloroplast-encoded 23S ribos... 111 2e-23
ATCG00950.1 | Symbols: RRN23S.1 | chloroplast-encoded 23S ribos... 111 2e-23
> AT1G22400.1 | Symbols: UGT85A1, ATUGT85A1 | UDP-Glycosyltransferase
superfamily protein | chr1:7903660-7906673 REVERSE LENGTH=1727
Length=1727
Score = 1195 bits (647), Expect = 0.0
Identities = 1178/1429 (82%), Gaps = 58/1429 (4%)
Strand=Plus/Plus
Query 1 ATGGAATCTCATG-TCGTTTATAACGAACAGAAACCCCACGTAGTTTGCGTGCCTTATCC 59
|||| |||||| | || || ||||| ||| ||||| || |||||||| || || |||||
Sbjct 67 ATGGGATCTCA-GATCATTCATAACTCACAAAAACCACATGTAGTTTGTGTTCCATATCC 125
Query 60 GGCTCAAGGCCACATCAACCCTATGCTGAAACTGGCTAAAATCCTTTACGTCAGAGGCTT 119
||||||||||||||||||||||||| ||| | |||||||| |||| ||| ||||||| |
Sbjct 126 GGCTCAAGGCCACATCAACCCTATGATGAGAGTGGCTAAACTCCTCCACGCCAGAGGC-T 184
Query 120 TC-ACGTCACCTTCGTCAACACCATCTACAACCACAACCGTCTT-CTTAGATCCCGT-GG 176
|| |||||||||||||||||||| ||||||||||||| ||| || ||| | || ||| ||
Sbjct 185 TCTACGTCACCTTCGTCAACACCGTCTACAACCACAATCGT-TTCCTTCGTTCTCGTGGG 243
Query 177 CCCAAACGCCCTCGATGGGCTTCCTTCGTTCCG-TTTCGAGTCCATCCCTGACGGTTTAC 235
|| || ||||| ||||| |||||||||||||| ||| |||||||| |||||||| |||
Sbjct 244 TCC-AATGCCCTAGATGGACTTCCTTCGTTCCGATTT-GAGTCCATTGCTGACGGTCTAC 301
Query 236 CAGAGACGA-ACGTGGACGCCACGCAAGACATCAGTGC-CTTGTGCGACG-CTGTCAAGA 292
||||||| | || |||| |||||||| ||||||| || ||| ||||| | | || ||
Sbjct 302 CAGAGAC-AGACATGGATGCCACGCAGGACATCACAGCTCTT-TGCGA-GTCCACCATGA 358
Query 293 AGAACTGTCTCACTCCATTTAAG-GAGCTTCTCCGGCGGATTAACTCCCAACAGAACGTT 351
||||||||||| |||| || || |||||||||| |||||| ||| | | | || |||
Sbjct 359 AGAACTGTCTCGCTCC-GTTCAGAGAGCTTCTCCAGCGGATCAACGCTGGAGATAATGTT 417
Query 352 CCTCCGGTGAGCTGCATTGTGTCAGATGGTACAATGAGCTTTACCCTTGACGCTGCGGAG 411
|||||||| ||||| ||||| || || ||| ||||||||||| ||||| | |||||||
Sbjct 418 CCTCCGGTAAGCTGTATTGTATCTGACGGTTGTATGAGCTTTACTCTTGATGTTGCGGAG 477
Query 412 GAGCTTGGTGTACCGGAGGTTCTTTTCTGGACCACAAGT-GCTTGTGGC-TTCATGGCTT 469
|||||||| || |||||||||||||| ||||| || ||| || ||| || ||| ||||||
Sbjct 478 GAGCTTGGAGTCCCGGAGGTTCTTTTTTGGACAACCAGTGGC-TGT-GCGTTCCTGGCTT 535
Query 470 ATCTACACTTTCATCTCTTCATCGAGAAGGGTC-TGTGTCCATTAAAAGATGAAAGTTAC 528
||||||||||| ||||||||||||||||||| | | ||||| |||||||||| ||||||
Sbjct 536 ATCTACACTTTTATCTCTTCATCGAGAAGGG-CTTATGTCCGCTAAAAGATGAGAGTTAC 594
Query 529 TTGACGAAGGAGTACTTAG-ATACA--GTTATAGATTGGATACCGTCTATGAAGAATCT- 584
||||||||||||||||||| | ||| |||||||||| ||||| | ||||||||| |
Sbjct 595 TTGACGAAGGAGTACTTAGAAGACACGGTTATAGATTTTATACCAACCATGAAGAATGTG 654
Query 585 AACACTAAAGGATATTCCTAGCTTCATTCGCACCACTAATCCTGATGACATTATGGTTAA 644
|| |||||||||||||||||||||||| || ||||||||||||||||| ||||| |||
Sbjct 655 AA-ACTAAAGGATATTCCTAGCTTCATACGTACCACTAATCCTGATGATGTTATGATTAG 713
Query 645 CTACGCCCTCCGTGAGACCGAGCGAGCCATGGATGCCAAGCACGCTTCTGCTATCATTCT 704
| ||||||||| ||||||||||||||| | || | |||||||||||||||||
Sbjct 714 TTTCGCCCTCCGCGAGACCGAGCGAGCC----A----AA-CGTGCTTCTGCTATCATTCT 764
Query 705 AAACACATTTGATGATCTTGAACATGATGTCATCCA-GTCTATGCAATCCATTTTACCTC 763
||||||||||||||| ||||| |||||||| | || | |||||||||| || |||||||
Sbjct 765 AAACACATTTGATGACCTTGAGCATGATGTTGTTCATG-CTATGCAATCTATCTTACCTC 823
Query 764 CCGTTTATTCAATTGGACCACTTCATCTGATAATGAACCAGGAGATTGATGAAAATAGTG 823
| ||||||||| ||||||| |||||||| || |||| ||||||||| ||| |||||
Sbjct 824 CGGTTTATTCAGTTGGACCGCTTCATCTCTTAGCAAACCGGGAGATTGAAGAAGGTAGTG 883
Query 824 ATG-TAGGAAAGAT-AGGATCAAATCTATGGAAAGAGGAGATGGATTGTTTAGATTGGCT 881
| | | |||| ||| || || ||| ||||||||||||||||||| ||||| ||||||||
Sbjct 884 A-GATTGGAATGATGAGT-TCGAATTTATGGAAAGAGGAGATGGAGTGTTTGGATTGGCT 941
Query 882 TGATACTAAAACTCGAAACAGTGTTGTTTATGTCAACTTTGGGAGCATAACGGTAATGAG 941
||||||||| |||| ||| ||||| ||||| |||||||||||||||||||||| ||||
Sbjct 942 TGATACTAAGACTCAAAATAGTGTCATTTATATCAACTTTGGGAGCATAACGGTTTTGAG 1001
Query 942 CGCAAAGCATCTTGTAGAGTTTGCTTGGGGATTGGCGGGATGTGGGAAAGAATTTTTATG 1001
| ||||| ||||| |||||||||||||| ||||||||| |||||||||| ||||||||
Sbjct 1002 TGTGAAGCAGCTTGTGGAGTTTGCTTGGGGTTTGGCGGGAAGTGGGAAAGAGTTTTTATG 1061
Query 1002 GGTGATTAGGCCAGATTTAGTAGTGGGAGAGGAGGCGGTAGTTCCCCCGGATTTTTTAAC 1061
|||||| ||||||||||||||| |||||||||||| | ||||| ||||| |||||||
Sbjct 1062 GGTGATCCGGCCAGATTTAGTAGCGGGAGAGGAGGCTATGGTTCCGCCGGACTTTTTAA- 1120
Query 1062 TGAGAAAGTA--GACCGGAGAATGCTAGCAAATTGGTGTCCTCAAGAGAAAGTTCTTTCT 1119
|| || | || ||||| || |||||||| | ||||||||||||||||||||| ||||||
Sbjct 1121 TG-GAGACTAAAGACCGCAGTATGCTAGCGAGTTGGTGTCCTCAAGAGAAAGTACTTTCT 1179
Query 1120 CATCCCT-CGATCGGAGTGTTCTTAACACATAGTGGATGGAACTCGACGTTGGAAAGTCT 1178
||||| | | || |||| ||| || || ||| | || |||||||||| |||||||||||
Sbjct 1180 CATCC-TGCTATTGGAGGGTTTTTGACGCATTGCGGGTGGAACTCGATATTGGAAAGTCT 1238
Query 1179 TTCATGCGGAGTTCCAATGGTTTGTTTGCCGTTTTTCGCAGAGCAACAAACGAATTGTAA 1238
||| || |||||||| ||||| |||| ||| ||||| || || || |||| |||||||||
Sbjct 1239 TTCGTGTGGAGTTCCGATGGTGTGTTGGCCATTTTTTGCTGACCAGCAAATGAATTGTAA 1298
Query 1239 ATTCTGTTGTGACGAATGGGAGGT-GGGTATGGAGATTGGTGAAGATGTGAGGAGGGAAG 1297
|| ||||||||||| ||||| || ||| || ||||| |||| |||||||| ||| || |
Sbjct 1299 GTTTTGTTGTGACGAGTGGGATGTTGGG-ATTGAGATAGGTGGAGATGTGAAGAGAGAGG 1357
Query 1298 A-GATTGAGACAGTGGTTAAAGAGTTGATGGATGGAGAGAAGGGAAAGAAAATGAGAGAG 1356
| | ||||| | ||||||| |||| | ||||||||||||||||||||||||||||||||
Sbjct 1358 AAG-TTGAGGCGGTGGTTAGAGAGCTCATGGATGGAGAGAAGGGAAAGAAAATGAGAGAA 1416
Query 1357 AAGACGGAAGAGTGGC-GACGATTGGC-GAAGGAAGCAACGGATCATAA 1403
||| ||| |||||||| | || || || || | |||| ||||| |||||
Sbjct 1417 AAGGCGGTAGAGTGGCAG-CGCTTAGCCGA-GAAAGCGACGGAACATAA 1463
> AT1G22380.1 | Symbols: AtUGT85A3, UGT85A3 | UDP-glucosyl transferase
85A3 | chr1:7900387-7902332 REVERSE LENGTH=1602
Length=1602
Score = 1175 bits (636), Expect = 0.0
Identities = 1147/1389 (83%), Gaps = 53/1389 (4%)
Strand=Plus/Plus
Query 16 GTTTATAACGAACAGAAACCCCACGTAGTTTGCGTGCCTTATCCGGCTCAAGGCCACATC 75
|||| ||||||||| ||||| |||||||||||||||||||| || ||||||||||||||
Sbjct 16 GTTTCTAACGAACAAAAACCACACGTAGTTTGCGTGCCTTACCCAGCTCAAGGCCACATT 75
Query 76 AACCCTATGCTGAAACTGGCTAAAATCCTTTACGTCAGAGGCTTTCACGTCACCTTCGTC 135
||||||||| ||||| |||||||| |||| |||||| |||||| |||||||||||||||
Sbjct 76 AACCCTATGATGAAAGTGGCTAAACTCCTCCACGTCAAAGGCTTCCACGTCACCTTCGTC 135
Query 136 AACACCATCTACAACCACAACCGTCTTCTTAGATCCCGT-GGCCCAAACGCCCTCGATGG 194
|||||| ||||||||||||||||||| || |||||||| || || ||||| ||||||||
Sbjct 136 AACACCGTCTACAACCACAACCGTCTACTCCGATCCCGTGGGGCC-AACGCACTCGATGG 194
Query 195 GCTTCCTTCGTTCC-GTTTCGAGTCCATCCCTGACGGT-TTACCAGAGAC-GAACGTGGA 251
|||||||| |||| | |||||||| || ||||||||| || || ||||| | ||||||
Sbjct 195 ACTTCCTTCCTTCCAG-TTCGAGTCAATACCTGACGGTCTT-CCGGAGACTG-GCGTGGA 251
Query 252 CGCCACGCAAGACATCAGTG-CCTTGTGCGACGCT-GTCAA-GAAGAACTGTCTCACTCC 308
||||||||| |||||| || |||| | ||| | | ||| ||| ||||||||| |||
Sbjct 252 CGCCACGCAGGACATCCCTGCCCTT-TCCGA-G-TCCACAACGAAAAACTGTCTCGTTCC 308
Query 309 ATTTAAGGAGCTTCTCCGGCGGATTAACTC-CCA-ACAGAACGTTCCTCCGGTGAGCTGC 366
|| ||| ||||||||| ||||||| || | | | || | || ||||||||||||||
Sbjct 309 GTTCAAGAAGCTTCTCCAGCGGATT--GTCACGAGAGAGGATGTCCCTCCGGTGAGCTGT 366
Query 367 ATTGTGTCAGATGGTACAATGAGCTTTACCCTTGACGCT-GCGGAGGAGCTTGGTGTACC 425
||||| ||||||||| | ||||||||||| ||||||| | ||||| ||||||||||| ||
Sbjct 367 ATTGTATCAGATGGTTCGATGAGCTTTACTCTTGACG-TAGCGGAAGAGCTTGGTGTTCC 425
Query 426 GGAGGTTC-TTTTCTGGACCACAAGTGCTTGTGGCTTCATGGCTTATCTACACTTTCATC 484
|||| ||| |||| |||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct 426 GGAGATTCATTTT-TGGACCACTAGTGCTTGTGGCTTCATGGCTTATCTACACTTTTATC 484
Query 485 TCTTCATCGAGAAGGGTCTGTGTCCATTAAAAGATGAAAGTTACTTGACGAAGGAGTACT 544
||||||||||||||||| | |||||| ||||||||| |||| |||||||||||| ||||
Sbjct 485 TCTTCATCGAGAAGGGTTTATGTCCAGTAAAAGATGCGAGTTGCTTGACGAAGGAATACT 544
Query 545 TAGATACAGTTATAGATTGGATACCGTCTATGAAGAATCTAACACTAAAGGATATTCCTA 604
| || ||||||||||||||||||||||| ||||| ||| ||| |||||| || |||||||
Sbjct 545 TGGACACAGTTATAGATTGGATACCGTCAATGAACAATGTAAAACTAAAAGACATTCCTA 604
Query 605 GCTTCATTCGCACCACTAATCCTGATGACATTATGGTTAACTACGCCCTCCGTGAGACCG 664
| || || || |||||||||||| | ||||| ||| | |||| || |||||||| |
Sbjct 605 GTTTTATACGTACCACTAATCCTAACGACATAATGCTCAACTTCGTTGTCCGTGAGGC-- 662
Query 665 AGCGAGCCATGGATGCCAAGCACGCTTCTGCTATCATTCTAAACACATTTGATGATCTTG 724
| | | | | |||| | || |||||||||||||| ||||| |||||||| ||||
Sbjct 663 AT-GT-CGA---A--CCAAACGTGCCTCTGCTATCATTCTGAACACGTTTGATGACCTTG 715
Query 725 AACATGATGTCATCCAGTCTATGCAATCCATTTTACCTCCCGTTTATTCAATTGGACCAC 784
||||||| | |||||||||||||||||||||||||| || |||||| |||| ||||| |
Sbjct 716 AACATGACATAATCCAGTCTATGCAATCCATTTTACCACCGGTTTATCCAATCGGACCGC 775
Query 785 TTCATCTGATAATGAACCAGG-AGATTGATGAAAATAGTGATG-TAGGAAAGATAGGATC 842
||||||| || | ||| ||| ||||||| ||| ||||||| | | |||| ||| |||||
Sbjct 776 TTCATCTCTTAGTAAAC-AGGGAGATTGAAGAAGATAGTGA-GATTGGAAGGATGGGATC 833
Query 843 AAATCTATGGAAAGAGGAGA-TGGATTGTTTAG-ATTGGCTTGATACTAAAACTCGAAAC 900
|||||||||||||||||||| || | || || | || ||||| ||||||| |||||||
Sbjct 834 AAATCTATGGAAAGAGGAGACTG-AGTGCTTGGGAT-GGCTTAATACTAAGTCTCGAAAT 891
Query 901 AGTGTTGTTTATGTCAACTTTGGGAGCATAACGGTAATGAGC--G-CAAAGCATCTTGTA 957
|| ||||||||||| ||||||||||||||||| |||||| | | || ||| | |||
Sbjct 892 AGCGTTGTTTATGTTAACTTTGGGAGCATAACAATAATGACCACGGCACAGCTT-TTG-- 948
Query 958 GAGTTTGCTTGGGGATTGGCGGGATGTGGGAAAGAATTTT-TATGGGTGATTAGGCCAGA 1016
|||||||||||||| ||||||| | ||||||| | ||| |||||||||| |||| ||
Sbjct 949 GAGTTTGCTTGGGGTTTGGCGGCAAC-GGGAAAGGAGTTTCTATGGGTGATGCGGCCGGA 1007
Query 1017 TTTAGTAGTGGGAGAGGAGGCGGT-AGTTCCCCCGGATTTTTTAACTGAGAAAG-TAGAC 1074
|| ||||| ||||||||||| || | |||| || |||||| | |||| || | ||
Sbjct 1008 TTCAGTAGCCGGAGAGGAGGCAGTGA-TTCCAAAAGAGTTTTTAGCGGAGACAGCT-GAT 1065
Query 1075 CGGAGAATGCT-AGCAAATTGGTGTCCTCAAGAGAAAGTTCTTTCTCATCCCTCGATCGG 1133
|| |||||||| | ||| |||||||||||| |||||||||||||||||||| || ||||
Sbjct 1066 CGAAGAATGCTGA-CAAGTTGGTGTCCTCAGGAGAAAGTTCTTTCTCATCCGGCGGTCGG 1124
Query 1134 AGTGTTCTTAACACATAGTGGATGGAACTCGACGTTGGAAAGTCTTTCATGCGGAGTTCC 1193
|| |||||| || ||| | || ||||| |||||||| |||||||||||||||||||||||
Sbjct 1125 AGGGTTCTTGACCCATTGCGGGTGGAATTCGACGTTAGAAAGTCTTTCATGCGGAGTTCC 1184
Query 1194 AATGGTTTGTTTGCCGTTTTTCGCAGAGCAACAAACGAATTGTAAATTCTGTTGTGACGA 1253
|||||| |||| ||| ||||| || ||||||||||| |||||||| || | |||||| ||
Sbjct 1185 AATGGTATGTTGGCCATTTTTTGCTGAGCAACAAACAAATTGTAAGTTTTCTTGTGATGA 1244
Query 1254 ATGGGAGGTGGGTATGGAGATTGGTGAAGATGTGAGGAGGGAAGAGATTGAGACAGTGGT 1313
||||||||| ||||| ||||| |||| |||||| | ||||| |||| ||||| | |||||
Sbjct 1245 ATGGGAGGTTGGTATTGAGATCGGTGGAGATGTCAAGAGGGGAGAGGTTGAGGCGGTGGT 1304
Query 1314 TAAAGAGTTGATGGATGGAGAGAAGGGAAAGAAAATGAGAGAGAAGACGGAAGAGTGGCG 1373
|| |||| | |||||||||||||| ||||||||||||||||||||| | | |||||||||
Sbjct 1305 TAGAGAGCTCATGGATGGAGAGAAAGGAAAGAAAATGAGAGAGAAGGCTGTAGAGTGGCG 1364
Query 1374 ACGATTGGC 1382
|| |||||
Sbjct 1365 GCGCTTGGC 1373
> AT1G22360.1 | Symbols: AtUGT85A2, UGT85A2 | UDP-glucosyl transferase
85A2 | chr1:7894858-7897591 REVERSE LENGTH=1720
Length=1720
Score = 1064 bits (576), Expect = 0.0
Identities = 1132/1399 (81%), Gaps = 43/1399 (3%)
Strand=Plus/Plus
Query 27 ACAGAAACCCCACGTAGTTTGCGTGCCTTATCCGGCTCAAGGCCACATCAACCCTATGCT 86
||| |||| |||||||||||||| ||||||||||||||||||||||||||||| ||| |
Sbjct 82 ACAAAAACAACACGTAGTTTGCGTTCCTTATCCGGCTCAAGGCCACATCAACCCAATGAT 141
Query 87 GAAACTGGCTAAAATCCTTTACGTCAGAGGCTTTCACGTCACCTTCGTCAACACCATCTA 146
|||| |||||||| ||||||||| || |||||| || | ||||||||||||||| ||||
Sbjct 142 GAAAGTGGCTAAACTCCTTTACGCCAAAGGCTTCCATATTACCTTCGTCAACACCGTCTA 201
Query 147 CAACCACAACCGTCTTCTTAGATCCCGTGGCCCAAACGCCCTCGATGGGCTTCCTTCGTT 206
||||||||||||||| || | |||||||| || |||||| | || ||||||||||| ||
Sbjct 202 CAACCACAACCGTCTCCTCCGGTCCCGTGGGCCTAACGCCGTTGACGGGCTTCCTTCTTT 261
Query 207 CCG-TTTCGAGTCCATCCCTGACGGTTTACCAGAGAC-GAACGTGGACGCCACGCAAGAC 264
||| ||| |||||||||||||||||| |||| ||||| || |||||||| ||| || |||
Sbjct 262 CCGGTTT-GAGTCCATCCCTGACGGTCTACCCGAGACTGA-CGTGGACGTCACTCAGGAC 319
Query 265 ATCAGTGC-CTTGTGCGACG-CTGTCAA-GAAGAACTGTCTCACTCCATTTAAGGAGCTT 321
||| | | ||| ||||| | | ||| |||| |||||||| ||||||| |||||||||
Sbjct 320 ATCCCTACTCTT-TGCGA-GTCCA-CAATGAAGCACTGTCTCGCTCCATTCAAGGAGCTT 376
Query 322 CTCCGGCGGATTAACTCCCAACAGA--ACGTTCCTCCGGTGAGCTGCATTGTGTCAGATG 379
||||||| ||| ||| | || || | |||||||| |||||||| || || || || |
Sbjct 377 CTCCGGCAGATCAACGC--AAGGGATGATGTTCCTCCTGTGAGCTGTATCGTATCCGACG 434
Query 380 GTACAATGAGCTTTACCCTTGACGCTGCGGAGGAGCTTGGTGTACCGGAGGTTCTTTTCT 439
|| |||||||| || ||||| |||||||||||||| ||||| |||||||||||||| |
Sbjct 435 GTTGTATGAGCTTCACACTTGATGCTGCGGAGGAGCTCGGTGTCCCGGAGGTTCTTTTTT 494
Query 440 GGACCACAAGTGCTTGTGGCTTCATGGCTTATCTACACTT-TCATCTCTTCATCGAGAAG 498
|||| || ||||||||||||||| ||||||| || ||| | ||| |||||||||||||
Sbjct 495 GGACAACTAGTGCTTGTGGCTTCTTGGCTTACCTTTACTACT-ATCGCTTCATCGAGAAG 553
Query 499 GG-TCTGTGTCCATTAAAAGATGAAAGTTACTTGACGAAGGAGTACTTAGATACAGTTAT 557
|| | | | ||| |||||||||| |||||||| || ||||| |||| || ||| ||
Sbjct 554 GGAT-TATCACCAATAAAAGATGAGAGTTACTTAACCAAGGAACACTTGGACACAAAAAT 612
Query 558 AGATTGGATACCGTCTATGAAGAATCTAACACTAAAGGATATTCCTAGCTTCATTCGCAC 617
||| |||||||| || |||||||| |||| |||||| || || ||||||||||| || ||
Sbjct 613 AGACTGGATACCATCGATGAAGAACCTAAGACTAAAAGACATCCCTAGCTTCATCCGAAC 672
Query 618 CACTAATCCTGATGACATTATGGTTAACTACGCCCTCCGTGAGACCGAGCGAGCCATGGA 677
||||||||||| ||||| ||| | |||| | |||||||| | || ||||||| |
Sbjct 673 GACTAATCCTGACGACATCATGCTCAACTTTATCATCCGTGAGGCTGACCGAGCCAA--A 730
Query 678 TGCCAAGCACGCTTCTGCTATCATTCTAAACACATTTGATGATCTTGAACATGATGTCAT 737
| || ||||| ||||||||||| ||||| ||||||||||| ||||| || || ||
Sbjct 731 --C---GC--GCTTCAGCTATCATTCTCAACACGTTTGATGATCTCGAACACGACGTTAT 783
Query 738 CCAGTCTATGCAATCCATTTTACCTCCCGTTTATTCAATTGGACCACTT-CATCTGA-TA 795
||| |||||| |||||||| ||||||| |||||||| |||||||| || ||| | | ||
Sbjct 784 CCAATCTATGAAATCCATTGTACCTCCGGTTTATTCTATTGGACCG-TTACATTT-ACTA 841
Query 796 -ATGAACCAGGAGATTGATGAAAATAGTGATGTAGGAAAGATAGGATCAAATCTATGGAA 854
| ||| || |||| | || ||||||| | ||| || |||||| ||||| ||||
Sbjct 842 GA-GAAACAAGAGAGCGGCGAGTATAGTGAAATCGGACGGACAGGATCGAATCTTTGGAG 900
Query 855 AGAGGAGA-TGGATTGTTTAGATTGGCTTGATACTAAAACTCGAAACAGTGTTGTTTATG 913
|||||||| || | ||| | || ||||| | || ||| || ||||||||||||| || |
Sbjct 901 AGAGGAGACTG-AGTGTCTGGACTGGCTAAACACGAAAGCTAGAAACAGTGTTGTGTACG 959
Query 914 TCAACTTTGGGAGCATAACGGTAATGAGCGCAAAGCATCTTGTAGAGTTTGCTTGGGGAT 973
| ||||| ||||| ||||| || |||||||||| || ||||| |||||||| ||||| |
Sbjct 960 TTAACTTCGGGAGTATAACTGTTTTGAGCGCAAAACAGCTTGTGGAGTTTGCATGGGGTT 1019
Query 974 TGGCGGGAT-GTGGGAAAGAATTTTTATGGGTGATTAGGCCAGATTTAGTAGT-GGGAGA 1031
|||| | | | |||||||| ||||| |||||||| |||| |||||||||| ||| ||
Sbjct 1020 TGGCTGCAACG-GGGAAAGAGTTTTTGTGGGTGATCCGGCCGGATTTAGTAGCCGGG-GA 1077
Query 1032 GGAGGCGGTAGTTCCCCCGGATTTTTTAACTGAGAAAGTAGACCGGAGAATGCTAGCAAA 1091
||||| | ||||| ||||| |||||||| | | | |||||||| ||| | ||||
Sbjct 1078 TGAGGCAATGGTTCCACCGGAGTTTTTAACGGCTACGGCGGACCGGAGGATGTTGGCAAG 1137
Query 1092 TTGGTGTCCTCAAGAGAAAGTTCTTTCTCATCCCTCGATCGGAGTGTTCTTAACACATAG 1151
||||||||||||||||||||| ||||||||||| | || |||| |||||| || ||| |
Sbjct 1138 TTGGTGTCCTCAAGAGAAAGTCCTTTCTCATCCGGCCATTGGAGGGTTCTTGACGCATTG 1197
Query 1152 TGGATGGAACTCGACGTTGGAAAGTCTTT-CATGCGGAGTTCCAATGGTTTGTTTGCCGT 1210
|| ||||||||||||||||||||||| | | | |||||||||||||| |||| |||||
Sbjct 1198 CGGGTGGAACTCGACGTTGGAAAGTCTATGCG-GTGGAGTTCCAATGGTGTGTTGGCCGT 1256
Query 1211 TTTTCGCAGAGCAACAAACGAATTGTAAATTCTGTTGTGACGAATGGGAGGT-GGGTATG 1269
|||| |||||||||||||| |||||||| || | | |||||||||||||||| ||| ||
Sbjct 1257 TTTTTGCAGAGCAACAAACTAATTGTAAGTTTTCTCGTGACGAATGGGAGGTTGGG-ATT 1315
Query 1270 GAGATTGGTGAAGATGTGAGGAGGGAAGAGATTGAGACAGTGGTTAAAGAGTTGATGGAT 1329
|||||||||| |||||||| ||| |||||| ||||| | ||||||| ||||||||||||
Sbjct 1316 GAGATTGGTGGAGATGTGAAGAGAGAAGAGGTTGAGGCGGTGGTTAGGGAGTTGATGGAT 1375
Query 1330 GGAGAGAAGGGAAAGAAAATGAGAGAGAAGACGGAAGAGTGGCGACGATTGGCGAAGGAA 1389
| ||||||||||||||| |||||||||||| ||||||||||||| || |||||||| |||
Sbjct 1376 GAAGAGAAGGGAAAGAATATGAGAGAGAAGGCGGAAGAGTGGCGGCGCTTGGCGAATGAA 1435
Query 1390 GCAACGGATCATAAGCATG 1408
|| ||||| ||||||||||
Sbjct 1436 GCGACGGAGCATAAGCATG 1454
> ATCG01180.1 | Symbols: RRN23S.2 | chloroplast-encoded 23S ribosomal
RNA | chrC:131149-133958 REVERSE LENGTH=2810
Length=2810
Score = 111 bits (60), Expect = 2e-23
Identities = 60/60 (100%), Gaps = 0/60 (0%)
Strand=Plus/Plus
Query 1450 AATGTCGGCTTGAGTAACGCAAACATTGGTGAGAATCCAATGCCCCGAAAACCCAAGGGT 1509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1274 AATGTCGGCTTGAGTAACGCAAACATTGGTGAGAATCCAATGCCCCGAAAACCCAAGGGT 1333
> ATCG00950.1 | Symbols: RRN23S.1 | chloroplast-encoded 23S ribosomal
RNA | chrC:104691-107500 FORWARD LENGTH=2810
Length=2810
Score = 111 bits (60), Expect = 2e-23
Identities = 60/60 (100%), Gaps = 0/60 (0%)
Strand=Plus/Plus
Query 1450 AATGTCGGCTTGAGTAACGCAAACATTGGTGAGAATCCAATGCCCCGAAAACCCAAGGGT 1509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1274 AATGTCGGCTTGAGTAACGCAAACATTGGTGAGAATCCAATGCCCCGAAAACCCAAGGGT 1333
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 75200416410
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5