BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg319434
Length=1797
Score E
Sequences producing significant alignments: (Bits) Value
AT2G13800.1 | Symbols: ATSERK5, SERK5, BAK8 | somatic embryogen... 2551 0.0
AT2G13790.1 | Symbols: ATSERK4, SERK4, BKK1, BAK7 | somatic emb... 2189 0.0
AT4G33430.2 | Symbols: BAK1 | BRI1-associated receptor kinase |... 929 0.0
> AT2G13800.1 | Symbols: ATSERK5, SERK5, BAK8 | somatic embryogenesis
receptor-like kinase 5 | chr2:5753271-5757239 FORWARD
LENGTH=1985
Length=1985
Score = 2551 bits (1381), Expect = 0.0
Identities = 1674/1814 (92%), Gaps = 25/1814 (1%)
Strand=Plus/Plus
Query 1 ATGGAACAAGGATCGTCCCGTGGCTTTATTTGGCTGATTCTATTTCTCGA-TTTGGTTCT 59
|||||||| ||||| ||||||||||||||||||||||||||||||||||| |||| |||
Sbjct 6 ATGGAACATGGATCATCCCGTGGCTTTATTTGGCTGATTCTATTTCTCGATTTTGTTTC- 64
Query 60 CAGAGTCACCGGAAACACACAAGTTGATGCTCT-ATCTGCTCTAAG-AGTCAG-TT-T-A 114
||||||||||||||| ||||||||||||||||| || ||||||||| || ||| || | |
Sbjct 65 CAGAGTCACCGGAAAAACACAAGTTGATGCTCTCAT-TGCTCTAAGAAG-CAGTTTATCA 122
Query 115 TC---TGACC---CTAACAATGTACTTCAAAGCTGGAATGTCACTCATGTTACTCCATGT 168
|| ||||| | |||||| |||| ||||||||||||| |||||| ||||||||||||
Sbjct 123 TCAGGTGACCATACAAACAATATACTCCAAAGCTGGAATGCCACTCACGTTACTCCATGT 182
Query 169 TCATGGGTTT-ATATAACTTGCAATAGTGAAAACAGTGTTACTCGTGTTGACCTGGGAAA 227
|||| ||||| || | |||||||||| ||||||||||||||||||| |||||||||| |
Sbjct 183 TCAT-GGTTTCATGTTACTTGCAATACTGAAAACAGTGTTACTCGTCTTGACCTGGGGAG 241
Query 228 TGTTAATCTATCTGGAGAACTGGTGCCACAGCTTGGTCAGCTTCCAAACTTGCAGTACTT 287
|| |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct 242 TGCTAATCTATCTGGAGAACTGGTGCCACAGCTTGCTCAGCTTCCAAATTTGCAGTACTT 301
Query 288 GGAGCTTTATAGCAATAACATTACTGGGGAGATACCTGAGGAGCTTGGCAACTTGATGGA 347
||| |||| || |||||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct 302 GGAACTTTTTAACAATAATATTACTGGGGAGATACCTGAGGAGCTTGGCGACTTGATGGA 361
Query 348 ACTAGTAAGCTTGGATCTTTACGCGAACAGCATAAGTGGTCCCATCCCTTCGTCTCTTGG 407
||||||||||||||| |||| || |||| |||||| |||||||||||||| ||||||||
Sbjct 362 ACTAGTAAGCTTGGACCTTTTTGCAAACAACATAAGCGGTCCCATCCCTTCCTCTCTTGG 421
Query 408 CAAACTAGGAAAACTCCGGTTCTTGCGTCTTAATAACAACAGCTTATCTGGAGAAATTCC 467
|||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct 422 CAAACTAGGAAAACTCCGCTTCTTGCGTCTTTATAACAACAGCTTATCTGGAGAAATTCC 481
Query 468 AAGGTCTTTGACTGCTGTGCCACTGCAGGATCTGGATGTCTCAAACAATCGGCTCAGTGG 527
|||||||||||||||| |||| ||| | | ||| ||| ||||||||||||||||||||||
Sbjct 482 AAGGTCTTTGACTGCTCTGCCGCTGGATGTTCTTGATATCTCAAACAATCGGCTCAGTGG 541
Query 528 AGATATTCCTGTAAATGGTTCTTTTTCGCAGTTCACTTCTATTAGTTTTGCCAATAATAA 587
|||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 542 AGATATTCCTGTTAATGGTTCCTTTTCGCAGTTCACTTCTATGAGTTTTGCCAATAATAA 601
Query 588 TTTAAGGCCGCGACCTGCATCTTCACCACCATCACCTTCAGGAATGACTGCAGCAATAGC 647
||||||||||||||||||||| | |||||||||||||||||| | ||||||||||||
Sbjct 602 ATTAAGGCCGCGACCTGCATCTCCTTCACCATCACCTTCAGGAACGTCTGCAGCAATAGT 661
Query 648 AGGGGGAGTTGTTGCAGGTGCGGCACTTCTATTTGCGCTTGCTTGGTGGATGAAAAGAAA 707
|| |||||||| ||| ||||| ||||||||||||||||||||||||||| ||| ||||||
Sbjct 662 AGTGGGAGTTGCTGCGGGTGCAGCACTTCTATTTGCGCTTGCTTGGTGGCTGAGAAGAAA 721
Query 708 ACTGCAGGATCACTTTTTTGATGTACCTGTTGAGGAAGATCCAGAGGTTCATTTAGGACA 767
|||||||| ||||||| |||||||||||| ||| ||||| ||||||||| ||||||||||
Sbjct 722 ACTGCAGGGTCACTTTCTTGATGTACCTGCTGAAGAAGACCCAGAGGTTTATTTAGGACA 781
Query 768 ATTTAAAAGGTTTTCCTTGCGTGAACTGCTAGTTGCTACAGAGAAATTTAGCAAAAGAAA 827
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 782 ATTTAAAAGGTTCTCCTTGCGTGAACTGCTAGTTGCTACAGAGAAATTTAGCAAAAGAAA 841
Query 828 TGTATTGGGTGAAGGACGTTTTGGTAAAGTGTATAAAGGACGTTTAGCCGATGGCTCTCT 887
||||||||| ||||||||||||||| | ||||||||||||||||||| |||| | ||||
Sbjct 842 TGTATTGGGCAAAGGACGTTTTGGTATATTGTATAAAGGACGTTTAGCTGATGACACTCT 901
Query 888 AGTGGCTGTGAAAAGGCTAAGA-GAAGAATGTACCAAGGGTAGGAAACTGCAGTTCCAAA 946
||||||||||||| |||||| | |||||| ||||||||||| || |||||||||| ||||
Sbjct 902 AGTGGCTGTGAAACGGCTAA-ATGAAGAACGTACCAAGGGTGGGGAACTGCAGTTTCAAA 960
Query 947 CTGAGGTTGAGATGATCAGTATGGCCGTTCATAGGAACTTGCTTCGGCTTCATGGTTTTT 1006
| || |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct 961 CCGAAGTTGAGATGATCAGTATGGCCGTTCATAGGAACTTGCTTCGGCTTCGTGGCTTTT 1020
Query 1007 GCATGACTCCAACTGAAAGATTACTTGTTTATCCCTACATGGCTAATGGAAGTGTTGCTT 1066
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1021 GCATGACTCCAACTGAAAGATTACTTGTTTATCCCTACATGGCTAATGGAAGTGTTGCTT 1080
Query 1067 CTTGTTTAAAAGAACGTCCTGAAGGCAATCCA-CCACTTGATTGGGCAAAAAGAAAGAAT 1125
||||||||| ||| |||||||||||||||||| || ||||| ||| ||||||||||| ||
Sbjct 1081 CTTGTTTAAGAGAGCGTCCTGAAGGCAATCCAGCC-CTTGACTGGCCAAAAAGAAAGCAT 1139
Query 1126 ATTGCTTTGGGATCAGCAAGGGGGCTCGCGTATCTACATGATCATGGCAACCAAAAAATC 1185
|||||| |||||||||||||||||||||| ||| |||| |||||| || ||||||| |||
Sbjct 1140 ATTGCTCTGGGATCAGCAAGGGGGCTCGCATATTTACACGATCATTGCGACCAAAAGATC 1199
Query 1186 ATTCACCGGGATGTGAAAGCTGCGAATATATTGTTAGATGAAGAGTTTGAAGCTGTTGTT 1245
||||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct 1200 ATTCACCTGGATGTGAAAGCTGCAAATATACTGTTAGATGAAGAGTTTGAAGCTGTTGTT 1259
Query 1246 GGAGATTTTGGGCTCGCAAAATTAATGAATTATAACGACTCCCATGTGACAACTGCGGTA 1305
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1260 GGAGATTTTGGGCTAGCAAAATTAATGAATTATAACGACTCCCATGTGACAACTGCTGTA 1319
Query 1306 CGCGGTAC-ATTTGGCCATATAGCTCCTGAGTACTTTTCGACAGGAAAATCTTCTGAGAA 1364
|| ||||| | ||||||||||||| || |||||| | |||||||||||||||||||||||
Sbjct 1320 CGGGGTACGA-TTGGCCATATAGCGCCCGAGTACCTCTCGACAGGAAAATCTTCTGAGAA 1378
Query 1365 AACTGATGTTTTTGGATACGGGGTCATGCTTCTCGAGCTCATCACTGGACAGAAA-GCTT 1423
|||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct 1379 GACTGATGTTTTTGGGTACGGGGTCATGCTTCTCGAGCTCATCACTGGACA-AAAGGCTT 1437
Query 1424 TCGATCTTGCTCGGCTTGCTAATGATGATGATATCATGTTACTCGACTGGGTGAAAGAGG 1483
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1438 TCGATCTTGCTCGGCTTGCAAATGATGATGATATCATGTTACTCGACTGGGTGAAAGAGG 1497
Query 1484 TTTTGAAAGAGAAGAAGTTGGAAAGCCTTGTTGACGCAGAGCTTGAAGGAAAGTACGTGG 1543
||||||||||||||||||||||||||||||| || ||||| || ||||||||||||||||
Sbjct 1498 TTTTGAAAGAGAAGAAGTTGGAAAGCCTTGTGGATGCAGAACTCGAAGGAAAGTACGTGG 1557
Query 1544 AAACAGAAGTGGAGCAGCTGATTCAAATGGCTCTGCTCTGCACTCAAAGTTCTGCGATGG 1603
|||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 1558 AAACAGAAGTGGAGCAGCTGATACAAATGGCTCTGCTCTGCACTCAAAGTTCTGCAATGG 1617
Query 1604 AACGTCCCAAGATGTCAGAAGTAGTGAGAATGCTGGAAGGAGATGGTTTAGCTGAGCGAT 1663
||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1618 AACGTCCAAAGATGTCAGAAGTAGTGAGAATGCTGGAAGGAGATGGTTTAGCTGAGAGAT 1677
Query 1664 GGGAAGACTGGCAAAAGGAGGAGATGCCAATACATGATTTTAATTATCAAGCCTATCCTC 1723
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1678 GGGAAGAATGGCAAAAGGAGGAGATGCCAATACATGATTTTAACTATCAAGCCTATCCTC 1737
Query 1724 ATGCTGGCACTGACTGGCTCATCCCCTATTCCAATTCCCTTATCGAAAACGATTACCCCT 1783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1738 ATGCTGGCACTGACTGGCTCATCCCCTATTCCAATTCCCTTATCGAAAACGATTACCCCT 1797
Query 1784 CAGGTCCAAGATAA 1797
| || |||||||||
Sbjct 1798 CGGGGCCAAGATAA 1811
> AT2G13790.1 | Symbols: ATSERK4, SERK4, BKK1, BAK7 | somatic embryogenesis
receptor-like kinase 4 | chr2:5741820-5746793 FORWARD
LENGTH=2234
Length=2234
Score = 2189 bits (1185), Expect = 0.0
Identities = 1554/1724 (90%), Gaps = 58/1724 (3%)
Strand=Plus/Plus
Query 124 AACAATGTACTTCAAAGCTGGAATGTC-ACTCATGTTACTCCATGTTCATGGGTTT-ATA 181
||||||||||| ||||||||| ||| | |||| ||||||||||||| | | ||||| ||
Sbjct 307 AACAATGTACTCCAAAGCTGGGATG-CTACTCTTGTTACTCCATGTAC-TTGGTTTCATG 364
Query 182 TAACTTGCAATAGTGAAAACAGTGTTACTCGTGTTGACC-TGGGAAATGTTAATCTATCT 240
| ||||||||| ||| || | |||||||||||||||| |||| |||| || ||||||
Sbjct 365 TTACTTGCAATCCTGAGAATAAAGTTACTCGTGTTGACCTTGGG-AATGCAAAACTATCT 423
Query 241 GGAGAA-CTGGTGCCACAGCTTGGTCAGCTTCCAAACTTGCAGTACTTGGAGCTTTATAG 299
||| || |||| ||| | |||||||||||| |||||||||||||||||||||||||||
Sbjct 424 GGA-AAGTTGGTTCCAGAACTTGGTCAGCTTTTAAACTTGCAGTACTTGGAGCTTTATAG 482
Query 300 CAATAACATTACTGGGGAGATACCTGAGGAGCTTGGCAACTTGATGGAACTAGTAAGCTT 359
|||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct 483 CAATAACATTACAGGGGAGATACCTGAGGAGCTTGGCGACTTGGTGGAACTAGTAAGCTT 542
Query 360 GGATCTTTACGCGAACAGCATAAGTGGTCCCATCCCTTCGTCTCTTGGCAAACTAGGAAA 419
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 543 GGATCTTTACGCAAACAGCATAAGCGGTCCCATCCCTTCGTCTCTTGGCAAACTAGGAAA 602
Query 420 ACTCCGGTTCTTGCGTCTTAATAACAACAGCTTATCTGGAGAAATTCCAAGGTCTTTGAC 479
||||||||||||||||||||| ||||| |||||||| || |||||||||| | |||||||
Sbjct 603 ACTCCGGTTCTTGCGTCTTAACAACAATAGCTTATCAGGGGAAATTCCAATGACTTTGAC 662
Query 480 TGCTGTGCCA-CTGCAGGATCTGGATGTCTCAAACAATCGGCTCAGTGGAGATATTCCTG 538
| ||||| || ||||| | ||||||| |||||||||||||||||||||||||||||||||
Sbjct 663 TTCTGTG-CAGCTGCAAGTTCTGGATATCTCAAACAATCGGCTCAGTGGAGATATTCCTG 721
Query 539 TAAATGGTTCTTTTTCGCAGTTCACTTCTATTAGTTTTGCCAATAATAATTTAA-GG--C 595
| |||||||||||||||| |||||| |||| |||||||| ||||||| |||| || |
Sbjct 722 TTAATGGTTCTTTTTCGCTCTTCACTCCTATCAGTTTTGCGAATAATAGCTTAACGGATC 781
Query 596 --CGCG-ACCT--G-C-A----T--CT-T-C-A--CCACCATCACCTTCA----GG--AA 631
| || |||| | | | | || | | | |||||| |||||||| || ||
Sbjct 782 TTCCCGAACCTCCGCCTACTTCTACCTCTCCTACGCCACCACCACCTTCAGGGGGGCAAA 841
Query 632 TGACTGCAGCAATAGCAGGGGGAGTTGTTGCAGGTGCGGCACTTCTA-----T-TT---G 682
||||||||||||||||||||||||||| ||||||||| ||||||||| | || |
Sbjct 842 TGACTGCAGCAATAGCAGGGGGAGTTGCTGCAGGTGCAGCACTTCTATTTGCTGTTCCAG 901
Query 683 -C---GC--TTGCTTGGTGGATGAAAAGAAAACTGCAGGATCACTTTTTTGATGTACCTG 736
| || ||||||||||| | | |||||||| ||||| |||||||||||||||||||
Sbjct 902 CCATTGCGTTTGCTTGGTGGCTCAGAAGAAAACCACAGGACCACTTTTTTGATGTACCTG 961
Query 737 TTGAGGAAGATCCAGAGGTTCATTTAGGACAATTTAAAAGGTTTTCCTTGCGTGAACTGC 796
||| ||||| ||||||||||||||||||||| | ||||||||| ||||||||||||||
Sbjct 962 CTGAAGAAGACCCAGAGGTTCATTTAGGACAACTCAAAAGGTTTACCTTGCGTGAACTGT 1021
Query 797 TAGTTGCTACAGAGAAATTTAGCAA-AAGAAATGTATTGGGTGA-AGGACGTTTTGGTAA 854
|||||||||| || || |||||||| || ||||||||||||| | ||| ||||||||||
Sbjct 1022 TAGTTGCTACTGATAACTTTAGCAATAA-AAATGTATTGGGT-AGAGGTGGTTTTGGTAA 1079
Query 855 AGTGTATAAAGGACGTTTAGCCGATGGCTCTCTAGTGGCTGTGAAAAGGCTAAGAGAAGA 914
|||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||
Sbjct 1080 AGTGTATAAAGGACGTTTAGCCGATGGCAATCTAGTGGCTGTCAAAAGGCTAAAAGAAGA 1139
Query 915 ATGTACCAAGGGTAGGAAACTGCAGTTCCAAACTGAGGTTGAGATGATCAGTATGGCCGT 974
| ||||||||||| || |||||||||| ||||| || |||||||||||||||||||||||
Sbjct 1140 ACGTACCAAGGGTGGGGAACTGCAGTTTCAAACCGAAGTTGAGATGATCAGTATGGCCGT 1199
Query 975 TCATAGGAACTTGCTTCGGCTTCATGGTTTTTGCATGACTCCAACTGAAAGATTACTTGT 1034
||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct 1200 TCATAGGAACTTGCTTCGGCTTCGTGGCTTTTGCATGACTCCAACTGAAAGATTACTTGT 1259
Query 1035 TTATCCCTACATGGCTAATGGAAGTGTTGCTTCTTGTTTAAAAGAACGTCCTGAAGGCAA 1094
||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct 1260 TTATCCCTACATGGCTAATGGAAGTGTTGCTTCTTGTTTAAGAGAGCGTCCTGAAGGCAA 1319
Query 1095 TCCACCACTTGATTGGGCAAAAAGAAAGAATATTGCTTTGGGATCAGCAAGGGGGCTCGC 1154
|||| ||||||||||| ||||||||||| |||||||| ||||||||||||||||||| ||
Sbjct 1320 TCCAGCACTTGATTGGCCAAAAAGAAAGCATATTGCTCTGGGATCAGCAAGGGGGCTTGC 1379
Query 1155 GTATCTACATGATCATGGCAACCAAAAAATCATTCACCGGGATGTGAAAGCTGCGAATAT 1214
|||| ||||||||||| || ||||||||||||||||||||||||| |||||||| |||||
Sbjct 1380 GTATTTACATGATCATTGCGACCAAAAAATCATTCACCGGGATGTTAAAGCTGCTAATAT 1439
Query 1215 ATTGTTAGATGAAGAGTTTGAAGCTGTTGTTGGAGATTTTGGGCTCGCAAAATTAATGAA 1274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1440 ATTGTTAGATGAAGAGTTTGAAGCTGTTGTTGGAGATTTTGGGCTCGCAAAATTAATGAA 1499
Query 1275 TTATAACGACTCCCATGTGACAACTGCGGTACGCGGTACATTTGGCCATATAGCTCCTGA 1334
|||||| |||||||||||||||||||| |||||||||||| ||||||||||||| || ||
Sbjct 1500 TTATAATGACTCCCATGTGACAACTGCTGTACGCGGTACAATTGGCCATATAGCGCCCGA 1559
Query 1335 GTACTTTTCGACAGGAAAATCTTCTGAGAAAACTGATGTTTTTGGATACGGGGTCATGCT 1394
|||| | ||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct 1560 GTACCTCTCGACAGGAAAATCTTCTGAGAAGACTGATGTTTTTGGGTACGGGGTCATGCT 1619
Query 1395 TCTCGAGCTCATCACTGGACAGAAA-GCTTTCGATCTTGCTCGGCTTGCTAATGATGATG 1453
||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||
Sbjct 1620 TCTCGAGCTCATCACTGGACA-AAAGGCTTTCGATCTTGCTCGGCTTGCAAATGATGATG 1678
Query 1454 ATATCATGTTACTCGACTGGGTGAAAGAGGTTTTGAAAGAGAAGAAGTTGGAAAGCCTTG 1513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1679 ATATCATGTTACTCGACTGGGTGAAAGAGGTTTTGAAAGAGAAGAAGTTGGAAAGCCTTG 1738
Query 1514 TTGACGCAGAGCTTGAAGGAAAGTACGTGGAAACAGAAGTGGAGCAGCTGATTCAAATGG 1573
| || ||||| || |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1739 TGGATGCAGAACTCGAAGGAAAGTACGTGGAAACAGAAGTGGAGCAGCTGATACAAATGG 1798
Query 1574 CTCTGCTCTGCACTCAAAGTTCTGCGATGGAACGTCCCAAGATGTCAGAAGTAGTGAGAA 1633
||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 1799 CTCTGCTCTGCACTCAAAGTTCTGCAATGGAACGTCCAAAGATGTCAGAAGTAGTGAGAA 1858
Query 1634 TGCTGGAAGGAGATGGTTTAGCTGAGCGATGGGAAGACTGGCAAAAGGAGGAGATGCCAA 1693
|||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct 1859 TGCTGGAAGGAGATGGTTTAGCTGAGAGATGGGAAGAATGGCAAAAGGAGGAGATGCCAA 1918
Query 1694 TACATGATTTTAATTATCAAGCCTATCCTCATGCTGGCACTGACTGGCTCATCCCCTATT 1753
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1919 TACATGATTTTAACTATCAAGCCTATCCTCATGCTGGCACTGACTGGCTCATCCCCTATT 1978
Query 1754 CCAATTCCCTTATCGAAAACGATTACCCCTCAGGTCCAAGATAA 1797
||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1979 CCAATTCCCTTATCGAAAACGATTACCCCTCGGGTCCAAGATAA 2022
> AT4G33430.2 | Symbols: BAK1 | BRI1-associated receptor kinase
| chr4:16086311-16090777 REVERSE LENGTH=2821
Length=2821
Score = 929 bits (503), Expect = 0.0
Identities = 930/1135 (82%), Gaps = 34/1135 (3%)
Strand=Plus/Plus
Query 680 TTGCGCTTGCTTGGTGGATGAAAAG-AAAA-CTGCAGGATCACTTTTTTGATGTACCTGT 737
|||| || ||||||||| | || | |||| | |||||| ||||| ||||||||||| |
Sbjct 1361 TTGCACTAGCTTGGTGG-CG-AAGGAAAAAGCCGCAGGACCACTTCTTTGATGTACCAGC 1418
Query 738 TGAGGAAGATCCAGAGGTTCATTTAGGACAATTTAAAAGGTTTTCCTTGCGTGAACTGCT 797
||| || || ||||| ||||||||||||||| | || |||||||| ||||||||||| |
Sbjct 1419 TGAAGAGGACCCAGAAGTTCATTTAGGACAACTGAAGAGGTTTTCATTGCGTGAACTACA 1478
Query 798 AGTTGCTACAGAGAAATTTAGCAA-AAGAAATGTATTGGGTGA-AGGACGTTTTGGTAAA 855
||||||| | || || |||||||| ||| || |||||||| | ||| |||||||||||
Sbjct 1479 AGTTGCTTCGGATAATTTTAGCAACAAG-AACATATTGGGT-AGAGGTGGTTTTGGTAAA 1536
Query 856 GTGTATAAAGGACGTTTAGCCGATGGCT-CTCTAGTGGCTGTGAAAAGGCTAAGAGAAGA 914
|| ||||||||||| ||||| ||||| | || ||||||| || |||||||||| ||| ||
Sbjct 1537 GTTTATAAAGGACGGTTAGCTGATGG-TACTTTAGTGGCCGTTAAAAGGCTAAAAGAGGA 1595
Query 915 ATGTA-CCAAGGGTAGG-AAACTGCAGTTCCAAACTGAGGTTGAGATGATCAGTATGGCC 972
| | |||| ||| || ||||||||||||| || |||||||||||||| ||||||||
Sbjct 1596 GCGCACCCAA-GGT-GGCGAACTGCAGTTCCAGACAGAGGTTGAGATGATTAGTATGGCG 1653
Query 973 GTTCATAGGAACTTGCTTCGGCTTCATGGTTTTTGCATGACTCCAACTGAAAGATTACTT 1032
||||| || |||||||||||||||| ||| ||||||||||||||||| |||||||| |||
Sbjct 1654 GTTCACAGAAACTTGCTTCGGCTTCGTGGATTTTGCATGACTCCAACCGAAAGATTGCTT 1713
Query 1033 GTTTATCCCTACATGGCTAATGGAAGTGTTGCTTCTTGTTTAAAAGAACGTCCTGAAGGC 1092
|||||||||||||||||||||||||||||||| || ||||||| ||||||||| || | |
Sbjct 1714 GTTTATCCCTACATGGCTAATGGAAGTGTTGCCTCCTGTTTAAGAGAACGTCCCGA-GTC 1772
Query 1093 A-ATCCACCACTTGATTGGGCAAAAAGAAAGAATATTGCTTTGGGATCAGCAAGGGGGCT 1151
| ||||||||||||||| |||| ||| || |||||| |||||||| ||||| |||||
Sbjct 1773 CCAGCCACCACTTGATTGGCCAAAGAGACAGCGTATTGCGTTGGGATCTGCAAGAGGGCT 1832
Query 1152 CGCGTATCTACATGATCATGGCAACCAAAAAATCATTCACCGGGATGTGAAAGCTGCGAA 1211
|||||| ||||||||||| || ||| ||| || ||||| || |||||||||||||| ||
Sbjct 1833 TGCGTATTTACATGATCATTGCGACCCAAAGATTATTCATCGAGATGTGAAAGCTGCAAA 1892
Query 1212 TATATTGTTAGATGAAGAGTTTGAAGCTGTTGTTGGAGATTTTGGGCTCGCAAAATTAAT 1271
||| ||||| ||||||||||||||||| || ||||| |||||||| || |||||| | ||
Sbjct 1893 TATTTTGTTGGATGAAGAGTTTGAAGCCGTGGTTGGGGATTTTGGACTTGCAAAACTCAT 1952
Query 1272 GAATTATAACGACTCCCATGTGACAACTGCGGTACGCGGTACATTTGGCCATATAGCTCC 1331
| | || || ||| | ||||||||||| || || || || ||| |||| |||||||| ||
Sbjct 1953 GGACTACAAAGACACACATGTGACAACCGCAGTGCGTGGGACAATTGGTCATATAGCCCC 2012
Query 1332 TGAGTACTTTTCGACAGGAAAATCTTCTGAGAAAACTGATGTTTTTGGATACGGGGTCAT 1391
||||||| |||| || |||||||| || |||||||| ||||| ||||| || || |||||
Sbjct 2013 TGAGTACCTTTCCACTGGAAAATCATCAGAGAAAACCGATGTCTTTGGGTATGGAGTCAT 2072
Query 1392 GCTTCTCGAGCTCATCACTGGACAGAAAG-CTTTCGATCTTGCTCGGCTTGCTAATGATG 1450
|||||| ||||| ||||||||||| || | |||| ||||||||||| || || |||||||
Sbjct 2073 GCTTCTTGAGCTTATCACTGGACA-AAGGGCTTTTGATCTTGCTCGCCTCGCGAATGATG 2131
Query 1451 ATGATATCATGTTACTCGACTGGGTGAAAGAGGTT-TTGAAAGAGAAGAAGTTGGAAAGC 1509
||||| |||||||||| ||||||||||||| |||| || ||||||||||| |||||| ||
Sbjct 2132 ATGATGTCATGTTACTAGACTGGGTGAAAG-GGTTGTTAAAAGAGAAGAAATTGGAA-GC 2189
Query 1510 -CTTGTTGACGCAGAGCTTGAAGGAAAGTACGTGGAA-ACAGAAGTGGAGCAGCTGATTC 1567
|| || || | || ||| | || || ||| || | ||||||||||||||| || |
Sbjct 2190 ACTAGTAGATGTTGATCTTCAGGGTAATTACAAAGACGA-AGAAGTGGAGCAGCTAATCC 2248
Query 1568 AAATGGCTCTGCTCTGCACTCAAAGTTCTGCGATGGAACGTCCCAAGATGTCAGAAGTAG 1627
|| ||||| | ||||||||||| ||||| | |||||| | ||||| ||||| ||||| |
Sbjct 2249 AAGTGGCTTTACTCTGCACTCAGAGTTCACCAATGGAAAGACCCAAAATGTCTGAAGTTG 2308
Query 1628 TGAGAATGCTGGAAGGAGATGGTTTAGCTGAGCGATGGGAAGACTGGCAAAAGGAGGAGA 1687
| |||||||| ||||||||||||||||||||| |||||||||| |||||||||||||| |
Sbjct 2309 TAAGAATGCTTGAAGGAGATGGTTTAGCTGAGAGATGGGAAGAGTGGCAAAAGGAGGAAA 2368
Query 1688 TGC-CAATACATGATTTTAATTATC-AAGCCTATCC-TC-ATGCTG-GCACTGACTGGCT 1742
|| || ||| ||||| || || | || || | || || | || | | ||| |||| |
Sbjct 2369 TGTTCAG-ACAAGATTTCAACTACCCAACCC-A-CCATCCA-GCCGTGT-CTGGCTGGAT 2423
Query 1743 CATCCCCTATTCCAATTCCCTTATCGAAAACGATTACCCCTCAGGTCCAAGATAA 1797
||| | |||||| ||||| ||||||||||| |||||||| ||||||||||||
Sbjct 2424 CATTGGCGATTCCACTTCCCAGATCGAAAACGAATACCCCTCGGGTCCAAGATAA 2478
Score = 289 bits (156), Expect = 8e-77
Identities = 343/431 (80%), Gaps = 21/431 (5%)
Strand=Plus/Plus
Query 16 TCCCGTGGCTT-TATTTGGCTGATTCT-ATTTCTCGATTTGGTTCTCAGAGTCACCGGAA 73
|||| | |||| | ||||| ||||||| ||| | |||||||||||||||||| | || |
Sbjct 509 TCCC-TTGCTTCT-TTTGGTTGATTCTCGTTT-TGGATTTGGTTCTCAGAGTCTCGGGCA 565
Query 74 ACACAC-AAGTTGATGCTCTATCTGCTCT-AAGAGTCAGTTTATCTGACCCTAACAATGT 131
|| | | ||| |||||||||| ||| || || | ||||||| | |||||||| || ||
Sbjct 566 ACGC-CGAAGGTGATGCTCTAAGTGCACTGAA-AAACAGTTTAGCCGACCCTAATAAGGT 623
Query 132 ACTTCAAAGCTGGAATGTC-ACTCATGTTACTCCATGTTCATGGGTTT-ATATAACTTGC 189
|||||||| ||| ||| | |||| ||||||||||||| ||| ||||| || | ||||||
Sbjct 624 GCTTCAAAGTTGGGATG-CTACTCTTGTTACTCCATGTACAT-GGTTTCATGTTACTTGC 681
Query 190 AATAGTGAAAACAGTGTTACTCGTGTTGACC-TGGGAAATGTTAATCTATCTGGAGAACT 248
||||| || || |||||||| |||||||||| |||| |||| |||||||||||| | ||
Sbjct 682 AATAGCGACAATAGTGTTACACGTGTTGACCTTGGG-AATGCAAATCTATCTGGACAGCT 740
Query 249 GGTGCCACAGCTTGGTCAGCTTCCAAACTTGCAGTACTTGGAGCTTTATAGCAATAACAT 308
|| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CGTAATGCAACTTGGTCAGCTTCCAAACTTGCAGTACTTGGAGCTTTATAGCAATAACAT 800
Query 309 TACTGGGGAGA-TACCTGAGGAGCTTGGCAA-CTTGATGGAACTAGTAAGCTTGGATCTT 366
||||||| | | | || || ||||||| || || || |||| | || ||||||||||||
Sbjct 801 TACTGGG-ACAATCCCAGAACAGCTTGGAAATCT-GACGGAATTGGTGAGCTTGGATCTT 858
Query 367 TACGCGAACAGCATAAGTGGTCCCATCCCTTCGTCTCTTGGCAAACT-AGGAAAACTCCG 425
||| ||||| |||| || || || || || |||| ||| ||| | |||| |||||
Sbjct 859 TACTTGAACAATTTAAGCGGGCCTATTCCATCAACTCTCGGCCGACTTAAGAAA-CTCCG 917
Query 426 GTTCTTGCGTC 436
|||||| |||
Sbjct 918 TTTCTTGAGTC 928
Score = 159 bits (86), Expect = 6e-38
Identities = 133/155 (86%), Gaps = 5/155 (3%)
Strand=Plus/Plus
Query 431 TGCGTCTTAATAACAACAGCTTATCTGGAGAAATTCCAAGGTCTTTGACTGCTGTGCC-- 488
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct 1064 TGCGTCTTAATAACAATAGCTTATCTGGAGAAATTCCAAGGTCTTTGACTGCTGT-CCTG 1122
Query 489 AC--TGCAGGATCTGGATGTCTCAAACAATCGGCTCAGTGGAGATATTCCTGTAAATGGT 546
|| | || | ||||||| |||||||||||| |||| |||||||||||||| ||||||
Sbjct 1123 ACGCTACAAGTTCTGGATCTCTCAAACAATCCTCTCACCGGAGATATTCCTGTTAATGGT 1182
Query 547 TCTTTTTCGCAGTTCACTTCTATTAGTTTTGCCAA 581
|| ||||| | |||||| | || |||||||||||
Sbjct 1183 TCCTTTTCACTTTTCACTCCAATCAGTTTTGCCAA 1217
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 88905165195
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5