BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg319461
Length=1050
Score E
Sequences producing significant alignments: (Bits) Value
AT2G14710.1 | Symbols: | F-box family protein | chr2:6298679-6... 883 0.0
AT3G16580.1 | Symbols: | F-box and associated interaction doma... 536 1e-151
AT1G47390.1 | Symbols: | F-box and associated interaction doma... 224 1e-57
AT5G36660.1 | Symbols: | transposable element gene | chr5:1439... 180 3e-44
AT5G36737.1 | Symbols: | transposable element gene | chr5:1445... 180 3e-44
AT2G14700.1 | Symbols: | unknown protein; Has 1 Blast hits to ... 54.7 2e-06
> AT2G14710.1 | Symbols: | F-box family protein | chr2:6298679-6300150
FORWARD LENGTH=1472
Length=1472
Score = 883 bits (478), Expect = 0.0
Identities = 874/1054 (83%), Gaps = 72/1054 (7%)
Strand=Plus/Plus
Query 30 GTTGATTGAAGAGATACTCTCTCGTGTCCCACCTAAATGTCTTGTTCGCTTCAGAACCGT 89
|||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct 287 GTTGATTGAAGAGATACTCTCTCGTGTCCCACCTAAATCTCTCGTTCGCTTCAGAACCGT 346
Query 90 ATCGAAACAATGGAACACTCTTTTCGACGACAAGACGTTCATCAACAACCACAAGATGAC 149
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 347 ATCGAAACAATGGAACGCTCTTTTCGACGACAAGACGTTCATCAACAACCACAAGATGAC 406
Query 150 GTTTCGATTCATCCTAGCAACCAAATACAGGATTTATTCGGTAAGCATCGATCCCGTAAT 209
|||||| || ||| |||||||||||| || ||||||||||||||||||||||||||| ||
Sbjct 407 GTTTCGTTTTATCTTAGCAACCAAATCCAAGATTTATTCGGTAAGCATCGATCCCGTGAT 466
Query 210 TGTTGTGGTACGTGACATAACCTTAGGTACTCCCGGGTTAG---CTTTCAAACTTAAAAA 266
|| | | ||||||| || ||||||||| ||| || |||| |||| ||||||| ||
Sbjct 467 AGT-G-G-TACGTGAGTTACCCTTAGGTATTCCAGGTTTAGAATCTTTGGAACTTAATAA 523
Query 267 CTTGGTTGATTGCAATGGGTTGTTGCTATGTGGCAAGAATAATGGAGCCGTTGTTTGGAA 326
||||||||||||||||| ||||||| |||||| ||||| ||||| || |||||||||||
Sbjct 524 CTTGGTTGATTGCAATGAGTTGTTGGTATGTGTTAAGAACAATGGTGCGGTTGTTTGGAA 583
Query 327 CCCTTGGTTGGGGCAAAGTAGATGGATCGAGCCGAGTTTAAAACATTCTCGTATGA-ATT 385
|||||||||||| || |||||||||||| ||||||||||||| ||||||| |||| |||
Sbjct 584 CCCTTGGTTGGGACAGAGTAGATGGATCCAGCCGAGTTTAAACCATTCTCCTATGGTATT 643
Query 386 TCGAAGGTATAGGATACGACAATAAGACTTACAAGATCGCTGCTTCGTCCCCTGGGATCA 445
||| || || | |||||||||||||| |||||||| | | || | | | |
Sbjct 644 -CGACGGCATTGTATACGACAATAAGAAGTACAAGAT-G--G-TT-G-C---T----T-- 687
Query 446 AATATCCCAATCTTGACTTGTGGACAATCTATGAATTTGCCTCTGATGTGTGGATAGACC 505
| | ||| | |||||||| ||||||||| ||| |||| ||||||||||||||||
Sbjct 688 --T-T-----TCTGG-CTTGTGGAAAATCTATGACTTTTCCTCCGATGTGTGGATAGACC 738
Query 506 ACGACCCAGAACCTGGTAATGG---CGGTAGCAT-AT-ACAT-TG-AAAGTGTTGTAT-C 557
|| | || || || |||| | | | | | || | || | ||| || ||||| |
Sbjct 739 ACAAGTCAAAATCTACTAATAGTAACACAAACGTGATTA-ATGTTCAAACTGCTGTATGC 797
Query 558 GTTGAATGGAACTTTGTATTGGGTTTGTTCTCATTACGAGACCGATCCCTTGTGCTACCA 617
|||||||||| ||||||||||||||||| || | | |||| |||||||||||||||||
Sbjct 798 -TTGAATGGAAATTTGTATTGGGTTTGTTTTCGTGAAAAGACTGATCCCTTGTGCTACCA 856
Query 618 CATT-AGAAAATTCGACTTT-TCCAGCGG-ATTATTCATAAGATTTTGTGATCTACCATG 674
|||| | ||| |||| ||| || | | | || || | ||||||||| | ||||| |
Sbjct 857 CATTCATAAA-TTCGG-TTTCTCGAACAGCAT-ATGGGTGAGATTTTGTAACCTACCTTT 913
Query 675 CGGGAGAAACCATGATGGGGATGCTCTTGTCCTTGG-GATCTTTAGGGGAGATCGGTTTT 733
||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||
Sbjct 914 TGGGAGAAACCATGATGGGGATGCTCTTGTCCTTGGTG-TCTTTAGAGGAGATCGGTTTT 972
Query 734 CGTTGCTAAAGCAATGCATGGTAACAAAGAAGATTGATATTTGGGTGACCGAGAACAAGA 793
|||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||
Sbjct 973 CGTTGCTAAAGCAATGCATGGTGACAAAGAAGATTGAGGTTTTTGTGACCGAGAACAAGA 1032
Query 794 TTAA---TGAAAATGGTGCGGATGTGGTTTGGATGAATTTCATGAACTTTT-CAAGTCCT 849
|||| ||| ||||||| || |||||||||| ||||||||||| ||||| ||||||||
Sbjct 1033 TTAACCATGAGAATGGTGATGACGTGGTTTGGAAGAATTTCATGA-CTTTTTCAAGTCCT 1091
Query 850 AACTTGCCGGATTTA-TA----C--T------CT--AAGCCAAGTTACTTCATCGAAGAT 894
|||||||| |||||| || | | || || ||||||||||||||||||| |
Sbjct 1092 AACTTGCCTGATTTAGTAGAGACGGTAAAATTCTCTAATCCAAGTTACTTCATCGAAGGT 1151
Query 895 AAAAGGCTCGTGGTGTGCTCTTGCGACGACACTGGTCGTGCTTGGATCTATATATTGGGG 954
|||||||| |||||||||||| | ||| ||||||||| ||||||||||||||| |||||
Sbjct 1152 AAAAGGCTTGTGGTGTGCTCTCGTGACAACACTGGTCACGCTTGGATCTATATACTGGGG 1211
Query 955 GATAATAAGTTGATCAGTAAATTTCATATATATTGTGTGGTTGATCCTTG-CCTTTTGCA 1013
|||| |||||||||||||||| || |||| | ||||||||||||||||| ||||| |||
Sbjct 1212 GATAGTAAGTTGATCAGTAAAACTCGTATAGAGTGTGTGGTTGATCCTTGGCCTTT-GCA 1270
Query 1014 CTGTACCTTTATTCCCAGTTTGGTACCGGTTCCT 1047
|||||||||| |||||||||||||||||||||||
Sbjct 1271 CTGTACCTTTGTTCCCAGTTTGGTACCGGTTCCT 1304
> AT3G16580.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:5647376-5648746 REVERSE LENGTH=1371
Length=1371
Score = 536 bits (290), Expect = 1e-151
Identities = 837/1086 (77%), Gaps = 97/1086 (9%)
Strand=Plus/Plus
Query 30 GTTGATTGAAGAGATACTCTCTCGTGTCCCACCTA-AATGTCTTGTTCGCTTCAGAACCG 88
||||||||||||||||||||||||||||||||| | ||| |||| ||||||||| |||||
Sbjct 75 GTTGATTGAAGAGATACTCTCTCGTGTCCCACC-AGAATCTCTTCTTCGCTTCAAAACCG 133
Query 89 TATCGAAACAATGGAACACTCTTTTC-GACGACAAGACGTTCATCAACAACCACAAGATG 147
||||||||||||||||| |||| ||| | ||| |||||||||||||| ||||||||||||
Sbjct 134 TATCGAAACAATGGAACGCTCTCTTCCG-CGATAAGACGTTCATCAATAACCACAAGATG 192
Query 148 ACGTTTCGATTCATCCTAGCAACCAAATACAGGATTTATTCGGTAAGCATCGATCCCGTA 207
||||||||||||||| |||||||||||| || ||||||||||||||||||||||||| |
Sbjct 193 ACGTTTCGATTCATCTTAGCAACCAAATCCAAGATTTATTCGGTAAGCATCGATCCCA-A 251
Query 208 -ATTGTTGTGGTACGTGACATAACCTTAGGTACTCCCGGGTTAGCTT-TCA--A-A--CT 260
|| |||||| ||||| ||||||||| || |||||| |||| | ||| | | |
Sbjct 252 GATAGTTGTG---CGTGAGTTAACCTTAGATATTCCCGGTTTAGAATCTCATGAGATACC 308
Query 261 TAAAAACTTGGTTGATTGCAATGGGTTGTTGCTATGTGGCAAGAATAATGGAGCCGTTG- 319
|||||| |||||||||||| || ||| || ||||||| || | | || |||| || |
Sbjct 309 TAAAAAATTGGTTGATTGCGATAAGTTATTACTATGTGACATGGAGAAAGGAGTTGT-GC 367
Query 320 TTTGGAACCCTTGGTTGGGGCAAAGTAGATGGATCGAGCC-GAGTTTAAAACATTCTCGT 378
|||||||||| ||| || | || |||| ||||||||| || | ||| ||| || ||||
Sbjct 368 TTTGGAACCCGTGGCTGAGACATAGTACATGGATCGA-CCAGGGTTCAAACCACACTCGA 426
Query 379 ATGAATTTCGAA-GGTATAGGATACGACAATAAG---ACTTACAAGATCGCTGCTTCGTC 434
||| | | | | || ||||||||| |||||||| | |||||||||| ||||| |
Sbjct 427 ATGGAGT-CTTATGGCATAGGATACAACAATAAGGGGAGTTACAAGATCTTTGCTTTTTG 485
Query 435 CCCTGGGATC-AAATATCC-CAATCTT-GACTTGTGGACAATCTATGAATTTGCCTCTGA 491
| ||| ||| | || || | || |||| ||||||| |||| | |||||||||
Sbjct 486 TGATCGGAAGGAAA-A-CCACACCCAGAGA-TTGTTGACAATCCATGACTCTGCCTCTGA 542
Query 492 TGTGTGGATAGACCACGACCC-A--GA-ACCTGGTAATGG----CG----GT--AG--CA 535
|| ||||| ||||| ||| || | || | | || | || | || | ||
Sbjct 543 TGCGTGGAAAGACCGCGAGCCTATTGATAA-TAGTCAGGGAAAACAAATTGTTCATAACA 601
Query 536 TATACATTGAAAGT-GT--TGTATCGTTGAATGGAACTTTGTATTGGGTTTGTTCTCATT 592
|||||| | ||| | || |||||| |||||||||| |||||||| |||| || | ||
Sbjct 602 TATACACTAAAATTAGTGGTGTATCATTGAATGGAAATTTGTATTTGGTTACTTATT-TT 660
Query 593 -ACGA-GACCGATCCCTTGTGCTACC-ACATTAGAAAATTCGACTT-TTCCAGCGGATTA 648
| | ||| |||| | ||| | ||| | ||| |||| | | | || ||| |||| |
Sbjct 661 GAA-ACGACTGATCTCGTGTACCACCTA-ATT-GAAA-T-CAA-TTCTTCGAGCGAAAGC 714
Query 649 TTCAT-AAGATTTTGTGATCTACCATGCGGGA-GA--AACCATGATGGGGATGCTCTT-G 703
|| | ||| ||||||||||||||||| |||| | ||| | | ||||||| || |
Sbjct 715 GTCGTGAAG-TTTTGTGATCTACCATGTGGGACGTCGAACTTTCTTAAGGATGCT-TTCG 772
Query 704 TCCTT-GGGATCTTTAG-GGGAGATCGGTTTTCGTTGCTAAAGCAATGC-ATGGTAACAA 760
||||| ||| | ||| | ||||||||| ||||| ||| ||||||||||| ||| |||||
Sbjct 773 TCCTTAGGG-T-TTTCGAGGGAGATCGATTTTCATTGTTAAAGCAATGCCATGC-AACAA 829
Query 761 AGAAGATTGATATTTGGGTGACCGAGAACAAGATTAATGAA-AATGGTGC--G-GATGTG 816
|||||||||| |||||||||| | || ||||||||||| || ||| || | ||||||
Sbjct 830 AGAAGATTGAGATTTGGGTGAGCAAGTACAAGATTAAT-AATAATCTTGATAGAGATGTG 888
Query 817 GTTTGGATGAATTTCATG-AACTTTTCAAGTCCTAACTTGCCGGATTTA-TA-------- 866
| ||||| || |||||| || ||| ||||||||||||||||||||||| ||
Sbjct 889 GAATGGATAAAGTTCATGGAAGTTT-CAAGTCCTAACTTGCCGGATTTAGTAGATGGATT 947
Query 867 C---TCTAAGCCAAGTTACTTCATCGAAGATAAAAGGCTCGTGGTGTGCTCTTGCGACGA 923
| ||| ||||||||||||| || ||||||||||||||||| |||||||| ||| ||||
Sbjct 948 CGACTCTCAGCCAAGTTACTTTATTGAAGATAAAAGGCTCGTCGTGTGCTCGTGCAACGA 1007
Query 924 CACTGGTCGTGCTTGGATCTATATATTGGGGGATAATAAGTTGATCAGTAAATTTCATAT 983
|||||||| |||||||||||| | || || || |||||||||||||||||| ||| ||
Sbjct 1008 AACTGGTCGGGCTTGGATCTATGTTTTCGGAGAAAATAAGTTGATCAGTAAAACTCAAAT 1067
Query 984 AT-ATTGTGTGGTTGATCCTTG-CCTTTTGCACTGTACCTTTATTCCCAGTTTGGTACCG 1041
| ||| |||||| |||| ||| |||| ||||| ||||||||||||||||||||||||
Sbjct 1068 -TGATTCTGTGGTGGATCTTTGGCCTTCA-CACTGGACCTTTATTCCCAGTTTGGTACCG 1125
Query 1042 GTTCCT 1047
||||||
Sbjct 1126 GTTCCT 1131
> AT1G47390.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr1:17379544-17380656 FORWARD LENGTH=1113
Length=1113
Score = 224 bits (121), Expect = 1e-57
Identities = 255/316 (81%), Gaps = 24/316 (8%)
Strand=Plus/Plus
Query 32 TGATTGAAGAGATACTCTCTCGTGTCCCACCTAAATGTCTTGTTCGCTTCAGAACCGTAT 91
|||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||| |
Sbjct 32 TGATTGAAGAGATACTCTCTCGTGTCCCTCCTGAATCTCTTGTTCGCTTCAGAACCGTTT 91
Query 92 CGAA-ACAATGGAACACTCTTTTCGACGACAAGACGTTCATCAACAACCACAAGATGACG 150
| || | |||||||| | || |||||||| |||| |||||| |||||||||||||||||
Sbjct 92 CTAAGA-AATGGAACGCCCTCTTCGACGATAAGATGTTCATTAACAACCACAAGATGACA 150
Query 151 TTTCGATTCATCCTAGCAACCAAATAC-AGGATT-TATTCGGTAAGCATCGA-TCCCGTA 207
|||||||||||| |||||||| ||| | | | || || ||||||||||| || ||| |
Sbjct 151 TTTCGATTCATCTTAGCAACCGAAT-CTAAG-TTCTACTCGGTAAGCAT-GACTCCAA-A 206
Query 208 -ATTGTTGTGGTACGTGACATAACCTTAGG-TACTCCCGGGTTAG--CTTTCAAACTTAA 263
|| | ||| ||||| ||| || || || |||||| |||| ||| |||| |||
Sbjct 207 GATAGAAGTG---CGTGAGTTAAGTTT-GGATATTCCCGGTTTAGAACTT--AAACCTAA 260
Query 264 AAACTTGGTTGATTGCAATGGGTTGTTGCTATGTGGCAAG-AATAATGGAG-C--CGTTG 319
|| ||| |||||||||||||||| ||||||||||||| | || || | || | ||| |
Sbjct 261 AATTTTGATTGATTGCAATGGGTTCTTGCTATGTGGCATGGAAAAA-GAAGGCATCGTGG 319
Query 320 TTTGGAACCCTTGGTT 335
|||||||||| |||||
Sbjct 320 TTTGGAACCCGTGGTT 335
> AT5G36660.1 | Symbols: | transposable element gene | chr5:14396688-14399025
FORWARD LENGTH=2338
Length=2338
Score = 180 bits (97), Expect = 3e-44
Identities = 157/186 (84%), Gaps = 4/186 (2%)
Strand=Plus/Plus
Query 864 ATACTCTAAGCCAAGTTACTTCATCGAAGATAAAAGGCTCGTGGTGTGCTCTTGCGACGA 923
|||||||||||||||||||||||||||||||||||| | ||| |||||||||||||| ||
Sbjct 2002 ATACTCTAAGCCAAGTTACTTCATCGAAGATAAAAGACCCGTAGTGTGCTCTTGCGATGA 2061
Query 924 CACTGGTCGTGCTTGGATCTATATATTGGGGGATAATAAGTTGATCAGTAAAT-TTCATA 982
|||||||| |||||||||||| | || |||| |||||| ||| ||||||| || | |
Sbjct 2062 AACTGGTCGGGCTTGGATCTATGTTTTCAGGGAAAATAAGCTGACCAGTAAAACTT-AGA 2120
Query 983 TATATTGTGTGGTTGATCCTTG-CCTTTTGCACTGTACCTTTATTCCCAGTTTGGTACCG 1041
|| || ||||||||||||||| |||| ||| | ||| |||||||||| ||||||||
Sbjct 2121 TAGATAATGTGGTTGATCCTTGACCTTC-GCATTCTACATTTATTCCCAATTTGGTACAT 2179
Query 1042 GTTCCT 1047
||||||
Sbjct 2180 GTTCCT 2185
Score = 148 bits (80), Expect = 8e-35
Identities = 534/740 (72%), Gaps = 83/740 (11%)
Strand=Plus/Plus
Query 99 ATGGAACACTCTTTTCGACGACAAGACGTTCATCAACAACCACAAGATGACGTTTCGATT 158
||||||| |||| ||| |||||||||||||||||||||||||||||| |||| ||||||
Sbjct 1 ATGGAACGCTCTCTTCAACGACAAGACGTTCATCAACAACCACAAGACAACGTATCGATT 60
Query 159 CATCCTAGCAACCAAATACAGGATTTATTCGGTAAGCAT-CGATCCCGTA-ATTGTTGTG 216
|||| || ||||||||| || |||||||||||||||||| | |||| | | || | |
Sbjct 61 CATCTTAACAACCAAATTCAAGATTTATTCGGTAAGCATTC-ATCC-GAAGATAGAAATA 118
Query 217 GTACGTGACAT-AACCTTAGGTACTCCCGGGTTAGCTTTC-A-A-ACTTAAAAACTTGGT 272
|| ||| || |||||||| || ||| || |||| | | | | || ||||||| ||||
Sbjct 119 -TA--TGA-ATTAACCTTAGATATTCCTGGTTTAGAATCCCAGATACCTAAAAACATGGT 174
Query 273 TGATTGCAATGGGTT-GTTGCTATGTGGCAAGAATAATGGAGCCGTTGTTTGGAACCCTT 331
||||| | || | ||||| ||| | | ||| | ||||| || ||||||||||| |
Sbjct 175 AGATTG-ATTGC-TACGTTGC-ATG-G--A-GAA-A--GGAGCTGTGGTTTGGAACCCAT 224
Query 332 GGTTGGGGCAAAGTAGATGGATCGAGCC-GAGTTTAAAACATTCTCGTATG-AATTTCGA 389
| ||| | || ||| ||| |||||||| || |||| | || ||| ||| ||| | |
Sbjct 225 GCTTGAGACAGAGTGGATAGATCGAGCAAGA-TTTACACCAAACTCA-ATGGAATC-CTA 281
Query 390 AGGTATAGGATACGACAATAAG---ACTTACAAGATC---GCTGCTTCGTCCCCTGGGAT 443
|| ||||||||| |||||||| | |||||||||| |||| || ||| ||| |
Sbjct 282 TGGCATAGGATACAACAATAAGGGGAGTTACAAGATCATTGCTGGTT-GTCGTCTGA-AG 339
Query 444 CAAATATCCCA-ATCTTGAC-TTGTGGACAAT-CTATGAATTTGCCTCTGATG-TGTGGA 499
|| |||||| | ||| ||||||||||| | |||| |||||||| ||| | ||||
Sbjct 340 GAAC-ATCCCACAAA--GACCTTGTGGACAATGC-ATGACTTTGCCTCCAATGCT-TGGA 394
Query 500 TAGACCACGACCCAGAACCTGGTAATG-----G-C-GGTAGCATATACAT-TGAAAGTGT 551
| ||| | | ||| | |||||| || | | || || | | || |||| ||
Sbjct 395 AATACCTCAAGTCAGTATCTGGTAGTGTAATAGTCAGGAAGGAAAAACGGCTGAAT-TGA 453
Query 552 TGTATCGTTGAATGGAACTT-TGTATTGGGTTTGTTCTCATTACGAGACCGATCCCTTGT 610
||| | | | || || |||||| ||| || || || |||| |||||| |||
Sbjct 454 AGTA-C-TC-ACCACAAGTTGTGTATTA--TTT-TTG--ATGACAAGACTGATCCCATGT 505
Query 611 GCTACCA-CATTAGA-AAATTCGACTTT-TCCAGCGGA-TTATTCATAAGATTTTGTGAT 666
| ||| | || | |||||| | || ||||| ||| || || | ||||||||| ||
Sbjct 506 AC-ACCTGCCCTATATAAATTCAA-TTCCTCCAG-GGAATTCTTTTTCAGATTTTGTCAT 562
Query 667 CTACCATGCGGGA-GA-A-ACCAT-GATGGGGATGCTCTTGTCCTT-GGGATCTT-T-AG 719
|||||||| || | || | || || | | |||||||||||| || ||| | || | ||
Sbjct 563 CTACCATGTGGAACGATAGACTATCG-TAAGGATGCTCTTGTACTCAGGG-T-TTATGAG 619
Query 720 GGGAGATCGGTTTTCGTTGCTAAAGCAATGC-ATGGTAACAAAGAAGATTGATATTTGGG 778
||| |||| ||||| ||| |||| |||||| ||| ||||||||||||||| | ||||
Sbjct 620 GGG-GATCAATTTTCATTGTTAAATCAATGCCATGC-AACAAAGAAGATTGAGGTCTGGG 677
Query 779 TGACCGAGAACAAGATTAAT 798
||| | || |||||||||||
Sbjct 678 TGAGCAAGTACAAGATTAAT 697
> AT5G36737.1 | Symbols: | transposable element gene | chr5:14455987-14458324
FORWARD LENGTH=2338
Length=2338
Score = 180 bits (97), Expect = 3e-44
Identities = 157/186 (84%), Gaps = 4/186 (2%)
Strand=Plus/Plus
Query 864 ATACTCTAAGCCAAGTTACTTCATCGAAGATAAAAGGCTCGTGGTGTGCTCTTGCGACGA 923
|||||||||||||||||||||||||||||||||||| | ||| |||||||||||||| ||
Sbjct 2002 ATACTCTAAGCCAAGTTACTTCATCGAAGATAAAAGACCCGTAGTGTGCTCTTGCGATGA 2061
Query 924 CACTGGTCGTGCTTGGATCTATATATTGGGGGATAATAAGTTGATCAGTAAAT-TTCATA 982
|||||||| |||||||||||| | || |||| |||||| ||| ||||||| || | |
Sbjct 2062 AACTGGTCGGGCTTGGATCTATGTTTTCAGGGAAAATAAGCTGACCAGTAAAACTT-AGA 2120
Query 983 TATATTGTGTGGTTGATCCTTG-CCTTTTGCACTGTACCTTTATTCCCAGTTTGGTACCG 1041
|| || ||||||||||||||| |||| ||| | ||| |||||||||| ||||||||
Sbjct 2121 TAGATAATGTGGTTGATCCTTGACCTTC-GCATTCTACATTTATTCCCAATTTGGTACAT 2179
Query 1042 GTTCCT 1047
||||||
Sbjct 2180 GTTCCT 2185
Score = 148 bits (80), Expect = 8e-35
Identities = 534/740 (72%), Gaps = 83/740 (11%)
Strand=Plus/Plus
Query 99 ATGGAACACTCTTTTCGACGACAAGACGTTCATCAACAACCACAAGATGACGTTTCGATT 158
||||||| |||| ||| |||||||||||||||||||||||||||||| |||| ||||||
Sbjct 1 ATGGAACGCTCTCTTCAACGACAAGACGTTCATCAACAACCACAAGACAACGTATCGATT 60
Query 159 CATCCTAGCAACCAAATACAGGATTTATTCGGTAAGCAT-CGATCCCGTA-ATTGTTGTG 216
|||| || ||||||||| || |||||||||||||||||| | |||| | | || | |
Sbjct 61 CATCTTAACAACCAAATTCAAGATTTATTCGGTAAGCATTC-ATCC-GAAGATAGAAATA 118
Query 217 GTACGTGACAT-AACCTTAGGTACTCCCGGGTTAGCTTTC-A-A-ACTTAAAAACTTGGT 272
|| ||| || |||||||| || ||| || |||| | | | | || ||||||| ||||
Sbjct 119 -TA--TGA-ATTAACCTTAGATATTCCTGGTTTAGAATCCCAGATACCTAAAAACATGGT 174
Query 273 TGATTGCAATGGGTT-GTTGCTATGTGGCAAGAATAATGGAGCCGTTGTTTGGAACCCTT 331
||||| | || | ||||| ||| | | ||| | ||||| || ||||||||||| |
Sbjct 175 AGATTG-ATTGC-TACGTTGC-ATG-G--A-GAA-A--GGAGCTGTGGTTTGGAACCCAT 224
Query 332 GGTTGGGGCAAAGTAGATGGATCGAGCC-GAGTTTAAAACATTCTCGTATG-AATTTCGA 389
| ||| | || ||| ||| |||||||| || |||| | || ||| ||| ||| | |
Sbjct 225 GCTTGAGACAGAGTGGATAGATCGAGCAAGA-TTTACACCAAACTCA-ATGGAATC-CTA 281
Query 390 AGGTATAGGATACGACAATAAG---ACTTACAAGATC---GCTGCTTCGTCCCCTGGGAT 443
|| ||||||||| |||||||| | |||||||||| |||| || ||| ||| |
Sbjct 282 TGGCATAGGATACAACAATAAGGGGAGTTACAAGATCATTGCTGGTT-GTCGTCTGA-AG 339
Query 444 CAAATATCCCA-ATCTTGAC-TTGTGGACAAT-CTATGAATTTGCCTCTGATG-TGTGGA 499
|| |||||| | ||| ||||||||||| | |||| |||||||| ||| | ||||
Sbjct 340 GAAC-ATCCCACAAA--GACCTTGTGGACAATGC-ATGACTTTGCCTCCAATGCT-TGGA 394
Query 500 TAGACCACGACCCAGAACCTGGTAATG-----G-C-GGTAGCATATACAT-TGAAAGTGT 551
| ||| | | ||| | |||||| || | | || || | | || |||| ||
Sbjct 395 AATACCTCAAGTCAGTATCTGGTAGTGTAATAGTCAGGAAGGAAAAACGGCTGAAT-TGA 453
Query 552 TGTATCGTTGAATGGAACTT-TGTATTGGGTTTGTTCTCATTACGAGACCGATCCCTTGT 610
||| | | | || || |||||| ||| || || || |||| |||||| |||
Sbjct 454 AGTA-C-TC-ACCACAAGTTGTGTATTA--TTT-TTG--ATGACAAGACTGATCCCATGT 505
Query 611 GCTACCA-CATTAGA-AAATTCGACTTT-TCCAGCGGA-TTATTCATAAGATTTTGTGAT 666
| ||| | || | |||||| | || ||||| ||| || || | ||||||||| ||
Sbjct 506 AC-ACCTGCCCTATATAAATTCAA-TTCCTCCAG-GGAATTCTTTTTCAGATTTTGTCAT 562
Query 667 CTACCATGCGGGA-GA-A-ACCAT-GATGGGGATGCTCTTGTCCTT-GGGATCTT-T-AG 719
|||||||| || | || | || || | | |||||||||||| || ||| | || | ||
Sbjct 563 CTACCATGTGGAACGATAGACTATCG-TAAGGATGCTCTTGTACTCAGGG-T-TTATGAG 619
Query 720 GGGAGATCGGTTTTCGTTGCTAAAGCAATGC-ATGGTAACAAAGAAGATTGATATTTGGG 778
||| |||| ||||| ||| |||| |||||| ||| ||||||||||||||| | ||||
Sbjct 620 GGG-GATCAATTTTCATTGTTAAATCAATGCCATGC-AACAAAGAAGATTGAGGTCTGGG 677
Query 779 TGACCGAGAACAAGATTAAT 798
||| | || |||||||||||
Sbjct 678 TGAGCAAGTACAAGATTAAT 697
> AT2G14700.1 | Symbols: | unknown protein; Has 1 Blast hits to
1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink). | chr2:6292466-6295726 FORWARD LENGTH=669
Length=669
Score = 54.7 bits (29), Expect = 2e-06
Identities = 32/33 (97%), Gaps = 1/33 (3%)
Strand=Plus/Plus
Query 1 ATGGCTGACGAAGAAGGTCTCTCTTTTTT-GTT 32
||||||||||||||||||||||||||||| |||
Sbjct 28 ATGGCTGACGAAGAAGGTCTCTCTTTTTTCGTT 60
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 51490000675
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5