BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg319692
Length=1146
Score E
Sequences producing significant alignments: (Bits) Value
AT2G17420.1 | Symbols: NTRA, ATNTRA, NTR2 | NADPH-dependent thi... 1808 0.0
AT4G35460.1 | Symbols: ATNTRB, NTRB, NTR1 | NADPH-dependent thi... 963 0.0
> AT2G17420.1 | Symbols: NTRA, ATNTRA, NTR2 | NADPH-dependent thioredoxin
reductase A | chr2:7564345-7566539 FORWARD LENGTH=1469
Length=1469
Score = 1808 bits (979), Expect = 0.0
Identities = 1096/1151 (95%), Gaps = 14/1151 (1%)
Strand=Plus/Plus
Query 4 TGTTGGATCTCAATGAGCCAGTCAAGATTCATAATAAAGTCTTTATTAAGCACAGCTGGA 63
|||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||
Sbjct 1 TGTTGGATCTCAATGAGCCAGTCAAGATTCATTATAAAGTCTTTATTTAGCACAGCAGGA 60
Query 64 GGTTTCTTACTTGGATCTGCTCTCTCAAATCCGCCGTCTCTAGCCACCGCGTTTTCTTC- 122
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 GGTTTCTTACTTGGATCTGCTCTCTCAAATCCGCCGTCTCTAGCCACCGCGTTTTCTTCT 120
Query 123 -C-T-C-C-TCCTCCT---CCACCACCGCCGTCGACATGGAAACTCACAAAACCAAGGTC 174
| | | | ||||||| || || ||||||||||||||||||||||||||||||||||
Sbjct 121 TCTTCCTCGTCCTCCTCCGCCGCCGCCGCCGTCGACATGGAAACTCACAAAACCAAGGTT 180
Query 175 TGCATCGTCGGAAGTGGACCAGCAGCACACACGGCGGCGATCTATGCATCTAGAGCTGAG 234
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 181 TGCATCGTCGGAAGTGGACCAGCAGCACACACGGCGGCGATCTATGCATCGAGAGCGGAG 240
Query 235 CTTAAGCCTCTTCTCTTCGAAGGATGGATGGCTAACGATATCGCCCCCGGCGGTCAATTA 294
|||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct 241 CTTAAGCCTCTTCTCTTCGAAGGATGGATGGCTAACGACATCGCTCCCGGCGGTCAATTA 300
Query 295 ACAACAACCACCGACGTCGAGAACTTCCCTGGATTCCCTGAAGGTATCCTCGGTGCTGAG 354
|| ||||| ||||||||||| ||||||||||| |||||||||||||| |||||| |||
Sbjct 301 ACTACAACAACCGACGTCGAAAACTTCCCTGGGTTCCCTGAAGGTATTCTCGGTATTGAT 360
Query 355 ATCGTTGAGAAATTCAGAAAACAATCGGAGAGATTCGGTACTAAGATCTTCACGGAAACT 414
||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||
Sbjct 361 ATCGTTGAGAAATTCAGAAAACAATCGGAGAGATTTGGAACTACGATCTTCACGGAAACT 420
Query 415 GTTAACAAAGTTGATTTCTCATCGAAACCGTTTAAGCTATTCACTGATTCGAGAACTGTT 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 421 GTTAACAAAGTTGATTTCTCATCGAAACCGTTTAAGCTATTCACTGATTCGAGAACTGTT 480
Query 475 CTCGCTGATTCTGTAATCATTTCTACTGGAGCTGTTGCTAAACGTCTTAGCTTCACTGGA 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 481 CTCGCTGATTCTGTAATCATTTCTACTGGAGCTGTTGCTAAACGTCTTAGCTTCACTGGA 540
Query 535 TCTGGTGAAGGTAACGGTGGTTTTTGGAATCGTGGTATCTCCGCTTGTGCTGTTTGCGAC 594
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 TCTGGTGAAGGTAATGGTGGTTTTTGGAATCGTGGTATCTCCGCTTGTGCTGTTTGCGAC 600
Query 595 GGAGCTGCTCCGATTTTTAGGAATAAGCCT-TTGGTTGTTATTGGTGGTGGTGATTCGGC 653
|||||||||||||||||||||||||||||| || || |||||||||||||||||||| ||
Sbjct 601 GGAGCTGCTCCGATTTTTAGGAATAAGCCTCTT-GTGGTTATTGGTGGTGGTGATTCAGC 659
Query 654 TATGGAGGAAGCTAATTTCCTCACTAAGTATGGATCTAAGGTTTATATAATCCATAGGAG 713
|||||||||||| ||||| || |||||||||||||||||||||||||| || ||||||||
Sbjct 660 TATGGAGGAAGCGAATTTTCTGACTAAGTATGGATCTAAGGTTTATATTATTCATAGGAG 719
Query 714 GGATACGTTTAGGGCGTCTAAGATTATGCAGCAGAGAGCTTTGTCTAACCCTAAGATTGA 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 720 GGATACGTTTAGGGCGTCTAAGATTATGCAGCAGAGAGCTTTGTCTAACCCTAAGATTGA 779
Query 774 AGTGATTTGGAACTCTGCGGTGGTGGAGGCTTATGGAGATGAAAATGGCAAAGGTGTTCT 833
|||||||||||||||||| ||||| ||||| ||||| ||||||||||| | |||||||
Sbjct 780 AGTGATTTGGAACTCTGCCGTGGTTGAGGCGTATGGTGATGAAAATGG---ACGTGTTCT 836
Query 834 TGGAGGATTGAAGGTGAAGAATGTTGTTACTGGAGTTGTTTCAGATTTGAAGGTGTCTGG 893
||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||
Sbjct 837 TGGAGGATTGAAGGTGAAGAATGTTGTTACTGGGGATGTTTCAGATCTGAAGGTGTCTGG 896
Query 894 ATTGTTCTTTGCTATTGGTCATGAGCCAGCTACGAAGTTTTTGGATGGGCAGCTTGAGCT 953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 897 ATTGTTCTTTGCTATTGGTCATGAGCCAGCTACGAAGTTTTTGGATGGGCAGCTTGAGCT 956
Query 954 TGATGAAGATGGTTATGTTGTGACTAAGCCTGGTACTACTAAGACGAGCGTGGTTGGTGT 1013
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct 957 TGATGAAGATGGTTATGTTGTGACCAAGCCAGGTACTACTAAGACGAGCGTGGTTGGTGT 1016
Query 1014 ATTTGCTGCTGGAGATGTTCAAGACAAGAAGTATAGACAGGCCATCACTGCTGCAGGAAC 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1017 ATTTGCTGCTGGAGATGTTCAAGACAAGAAGTATAGACAGGCCATCACTGCTGCAGGAAC 1076
Query 1074 TGGGTGCATGGCGGCTTTGGACGCAGAGCATTACTTACAAGAGATTGGATCTCAGGAGGG 1133
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1077 TGGGTGCATGGCGGCATTGGATGCAGAGCATTACTTACAAGAGATTGGATCTCAGGAGGG 1136
Query 1134 TAAGAGTGATT 1144
|||||||||||
Sbjct 1137 TAAGAGTGATT 1147
> AT4G35460.1 | Symbols: ATNTRB, NTRB, NTR1 | NADPH-dependent thioredoxin
reductase B | chr4:16842188-16844082 FORWARD LENGTH=1500
Length=1500
Score = 963 bits (521), Expect = 0.0
Identities = 851/1007 (85%), Gaps = 35/1007 (3%)
Strand=Plus/Plus
Query 154 GAAACTCACAAAACCAAGG-TCTGCATCGTCGGAAGTGGACCAGCAGCACACACGGCGGC 212
||||||||||| | ||||| |||| ||||| |||||||| ||||| ||||||||||||||
Sbjct 169 GAAACTCACAACA-CAAGGCTCTGTATCGTAGGAAGTGGCCCAGCGGCACACACGGCGGC 227
Query 213 GATCTATGCATCTAGAGCTGAGCTTAAGCCTCTTCTCTTCGAAGGATGGATGGCTAACGA 272
||| || ||| |||| ||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 228 GATTTACGCAGCTAGGGCTGAACTTAAACCTCTTCTCTTCGAAGGATGGATGGCTAACGA 287
Query 273 TATCGCCCCCGGCGGTCAATTAACAACAACCACCGACGTCGAGAACTTCCCTGGATTCCC 332
||||| ||||| |||||| ||||||| ||||||||||||||||| ||||| ||||| ||
Sbjct 288 CATCGCTCCCGGTGGTCAACTAACAACCACCACCGACGTCGAGAATTTCCCCGGATTTCC 347
Query 333 TGAAGGTATCCTCGGTGCT-GAGATCGTTGAGAAATTCAGAAAACAATCGGAGAGATTCG 391
|||||||| ||||| | | ||| || ||| |||||| | |||||||||||| ||||||
Sbjct 348 AGAAGGTATTCTCGGAG-TAGAGCTCACTGACAAATTCCGTAAACAATCGGAGCGATTCG 406
Query 392 GTACTAAGATCTTCACGGAAACTGTTAAC-AAAGTTGATTTCTCATCGAAACCGTTTAAG 450
|||||| ||| || || || || | | || ||||| |||||||| |||||||||||||||
Sbjct 407 GTACTACGATATTTACAGAGAC-GGTGACGAAAGTCGATTTCTCTTCGAAACCGTTTAAG 465
Query 451 CTATTCACTGATTCGAGAA-CTGTTCTCGCTGATTCTGT-AATCATTTCTACTGGAGCTG 508
|||||||| ||||| | || | |||||||||| |||| | || | ||||||||||||
Sbjct 466 CTATTCACAGATTC-AAAAGCCATTCTCGCTGACGCTGTGATTC-TCGCTACTGGAGCTG 523
Query 509 TTGCTAAACGTCTTAGCTTCACTGGATCTGGTGAAGGTAAC-GGTGGTTTTTGGAATCGT 567
| ||||| || ||||||||| |||||||||||||| | | || ||||| ||||| |||
Sbjct 524 TGGCTAAGCGGCTTAGCTTCGTTGGATCTGGTGAAGCT-TCTGGAGGTTTCTGGAACCGT 582
Query 568 GGTATCTCCGCTTGTGCTGTTTGCGACGGAGCTGCTCCGATTTTTAGGAATAAGCCT-TT 626
|| |||||||||||||||||||||||||||||||||||||| || | || || ||| ||
Sbjct 583 GGAATCTCCGCTTGTGCTGTTTGCGACGGAGCTGCTCCGATATTCCGTAACAAACCTCTT 642
Query 627 G-GTTGTTATTGGTGGTGGTGATTCGGCTATGGAGGAAGCTAA-TTTCCTCACTAAGTAT 684
| | || || ||||| || ||||| || ||||| ||||| || |||| | || || |||
Sbjct 643 GCGGTG--ATCGGTGGAGGCGATTCAGCAATGGAAGAAGCAAACTTTCTT-ACAAAATAT 699
Query 685 GGATCTAAGGTTTATATAATCCATAGGAGGGATACGTTTAGGGCGTCTAAGATTATGCAG 744
|||||||| || ||||||||||||||||| ||| | ||||| ||||||||||||||||||
Sbjct 700 GGATCTAAAGTGTATATAATCCATAGGAGAGATGCTTTTAGAGCGTCTAAGATTATGCAG 759
Query 745 CAGAGAGCTTTGTCTAACCCTAAGATTGAAGTGATTTGGAACTC-TGCGGTGGTGGAGGC 803
||| ||||||||||||| ||||||||||| |||||||||||||| | | || ||||| ||
Sbjct 760 CAGCGAGCTTTGTCTAATCCTAAGATTGATGTGATTTGGAACTCGT-CTGTTGTGGAAGC 818
Query 804 TTATGGAGATG-A-AAATGGCAAAGGTGTTCTTGGAGGATTGAAGGTGAAGAATGTTGTT 861
||||||||||| | ||| | | | ||| |||||||||||||| ||||||||||| |||
Sbjct 819 TTATGGAGATGGAGAAA-G--AGATGTG--CTTGGAGGATTGAAAGTGAAGAATGTGGTT 873
Query 862 ACTGGAGTTGTTTCAGATTTGAAGGTGTCTGGATTGTTCTTTGCTATTGGTCATGAGCCA 921
|| |||| |||||| ||||| || || |||||||||||||||||||||||||||||||||
Sbjct 874 ACCGGAGATGTTTCTGATTTAAAAGTTTCTGGATTGTTCTTTGCTATTGGTCATGAGCCA 933
Query 922 GCTACGAAGTTTTTGGATGG-GCAGCTTGAGCTT-GATGAAGATGGTTATGTTGTGACTA 979
||||| |||||||||||||| | | ||||| || ||| |||||||||||||| || |
Sbjct 934 GCTACCAAGTTTTTGGATGGTGGTG-TTGAG-TTAGATTCGGATGGTTATGTTGTCACGA 991
Query 980 AGCCTGGTACTACTA-AGACGAGCGTGGTTGGTGTATTT-GCTGCTGGAGATGTTCAAGA 1037
||||||||||||| | |||| ||||| || || ||| ||||| || |||||||| ||
Sbjct 992 AGCCTGGTACTAC-ACAGACTAGCGTTCCCGGAGT-TTTCGCTGCGGGTGATGTTCAGGA 1049
Query 1038 CAAGAAGTATAGACAGGCCATCACTGCTGCAGGAACTGGGTGCATGGCGGCTTTGGACGC 1097
||||||||||| || |||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 1050 TAAGAAGTATAGGCAAGCCATCACTGCTGCAGGAACTGGGTGCATGGCAGCTTTGGATGC 1109
Query 1098 AGAGCATTACTTACAAGAGATTGGATCTCAGGAGGGTAAGAGTGATT 1144
||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct 1110 AGAGCATTACTTACAAGAGATTGGATCTCAGCAAGGTAAGAGTGATT 1156
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 56224610400
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5