BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg319696
Length=1620
Score E
Sequences producing significant alignments: (Bits) Value
AT2G17470.1 | Symbols: | Aluminium activated malate transporte... 2584 0.0
AT1G68600.1 | Symbols: | Aluminium activated malate transporte... 1314 0.0
> AT2G17470.1 | Symbols: | Aluminium activated malate transporter
family protein | chr2:7584505-7588008 REVERSE LENGTH=1684
Length=1684
Score = 2584 bits (1399), Expect = 0.0
Identities = 1551/1624 (96%), Gaps = 11/1624 (1%)
Strand=Plus/Plus
Query 1 ATGGGTCCATTTCATCCGCAAAGCAGAGAGAGGCTTCTCTCGCAGAATGGATACTCAGAT 60
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1 ATGGGTCCATTTCATCAGCAAAGCAGAGAGAGGCTTCTCTCGCAGAATGAATACTCAGAT 60
Query 61 -TCGTGTTTCCGAAAGATCACAAAACTGTGCGAGTTGGGACATTCAGATCGTAGAAGGAT 119
| ||||||||| ||||||||||| |||||||||||||||||||| |||||| |||||||
Sbjct 61 AT-GTGTTTCCGCAAGATCACAAACCTGTGCGAGTTGGGACATTCCGATCGTCGAAGGAT 119
Query 120 CTTCTTCGCGGTCAAGATGGGAATGGCTCTTGCCCTCTGCTCCATTGTTATCTTCCTCAA 179
|||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct 120 CTTCTTCGCGGTGAAGATGGGAATGGCTCTTGCCCTCTGCTCCGTTGTTATTTTCCTCAA 179
Query 180 AGAGCCGTTGCATGATGCTAGTAAATACTCTGTATGGGGCATCCTCACTGTGGTCGTGGT 239
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 180 AGAGCCGTTGCATGATGCTAGTAAATACTCTGTATGGGGCATCCTTACTGTCGTCGTGGT 239
Query 240 TTTCGAGTATTACGTAGGAGCAACTTTGGTCAAAGGATTCAACAGAGCGATAGGCACGGT 299
||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 240 TTTCGAGTATTCCGTTGGAGCAACTTTGGTCAAAGGATTCAACAGAGCGATAGGCACAGT 299
Query 300 ATCTGCTGGAGGACTCGCTCTTGGCATCGCGAGGCTCTCTGTTTTATCAGGAGATTTAGA 359
|||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct 300 ATCTGCTGGAGGGCTCGCTCTTGGCATCGCGAGGCTCTCTGTTTTATCAAGAGATTTCGA 359
Query 360 GCAAGCCATCATCATAATCTGCATTTTCCTTGCAGGTTTCATTTCTAGTTATTCGAAACT 419
|||| |||||||||||| |||||||||||| |||||||||||| |||||||||| |||||
Sbjct 360 GCAAACCATCATCATAACCTGCATTTTCCTAGCAGGTTTCATTGCTAGTTATTCAAAACT 419
Query 420 CCACCCGGCCATGAAACCATATGAATATGCATTCAGGGTGTTCTTGTTGACATTCTGTAT 479
||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 420 CCACCCGGCCATGAAGCCATATGAATACGCATTCAGGGTGTTCTTGTTGACATTCTGTAT 479
Query 480 TGTTCTGGTTTCGGGGAACAATACCGGAGATTTCTTCAGCACAGCGTATTACAGGTTTTT 539
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 480 TGTTCTGGTTTCGGGGAACAATACCGGAGACTTCTTCAGCACGGCGTATTACAGGTTTTT 539
Query 540 GTTTATTGTTATTGGTGCAACCACATGTTTGGTTGTGAATATATTCATATTTCCGATATG 599
|||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 540 GTTTATTGTTGTTGGTGCAACCACATGTTTGGTTGTGAATATATTCATATTTCCAATATG 599
Query 600 GGCCGGGGAAGATCTCCATAAACTGGTGGCCAATAATTTCAAGAGTGTGGCAAATTCCCT 659
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 600 GGCCGGGGAGGATCTCCATAAACTGGTGGCCAATAATTTCAAGAGTGTGGCAAATTCCCT 659
Query 660 AGAAGGATGTGCT-AATGGCTATTTGCAATGTGTGGAATACGAGAGAGTACCCTCGAAGA 718
||||||||||| | |||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct 660 AGAAGGATGTG-TAAATGGCTACTTGCAATGTGTGGAATATGAGAGAGTACCCTCGAAGA 718
Query 719 TTCTCACGTACCAAACATCTGATGATCCATTATATAGTGGGTACAGGTCCGCTATTCAAT 778
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 719 TTCTCACGTACCAAACATCTGATGATCCATTATACAGTGGGTACAGGTCCGCTATTCAAT 778
Query 779 CAACAAATCAAGAAGAATCTCTGCTCGATTTTGCCATATGGGAGCCTCCACATGGACCTT 838
| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 779 CTACAAATCAGGAAGAATCTCTGCTCGATTTTGCCATATGGGAGCCTCCACATGGACCTT 838
Query 839 ACAGAACGTTTAACCATCCATGGAAAAACTATGTCAAACTTAGTGGTGCATTAAGGCATT 898
||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct 839 ACAGAACGTTTAACCATCCCTGGAAAAACTATGTCAAACTTAGTGGTGCAGTAAGGCATT 898
Query 899 GTGCTTTCACCGTCATGGCAATACATGGTTGCATTCTTTCAGAGATACAGGCAGCTCCAG 958
||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct 899 GTGCTTTCACCGTCATGGCGATACATGGTTGCATACTTTCAGAGATACAGGCAGCTCCAG 958
Query 959 AGAAACGACAGGC-TTTCCGTCATGAGCTTCAAAGAGTTGGCAATGAAGGCGCAAAAGTT 1017
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 959 AGAAACGACAGGCATTT-CGTCATGAGCTTCAAAGAGTTGGCAATGAAGGCGCAAAAGTT 1017
Query 1018 CTGCGTTTGATTGGAGACAAAGTGGAGAAAATGGAGAAGCTAAGCCCCAGG-GAGATTCT 1076
||||||||||||||||| |||||||||||||||||||| || || ||| || ||||||||
Sbjct 1018 CTGCGTTTGATTGGAGAAAAAGTGGAGAAAATGGAGAATCT-AGGCCCGGGAGAGATTCT 1076
Query 1077 AAATGACGTTCAACTTGCAGCAGAGGAGCTACAGATGAAAATAGACAGTAAATCCTACCT 1136
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1077 AAATGACGTTCAACGTGCAGCAGAGGAGCTACAGATGAAAATAGACAGTAAATCCTACCT 1136
Query 1137 TCTTGTGAACTCAGAAAGCTGGGCGGCTACTAAAGAGCAAGCTGAAGCTGAAGTAGATGA 1196
|||||||||||||||||||||||| |||||||||||| |||||||||| |||| | ||||
Sbjct 1137 TCTTGTGAACTCAGAAAGCTGGGCAGCTACTAAAGAGAAAGCTGAAGCAGAAGAATATGA 1196
Query 1197 AGAAGAAGCTCACGAGACCAAAGTGATCAAATCCTTAAGTCAGATTTGGGATACCAGCAG 1256
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1197 AGAAGAAGCTCACGAGACCAAAGTGATCAAATCCTTAAGTCAGATTTGGGATACCAACAG 1256
Query 1257 TAGCAGCAACAACCAGAATCCAACTAGTGGTAATGATGAATCTCAGATATGGGAATCAAC 1316
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1257 TAGCAGCAACAATCAGAATCCAGCTAGTGGTAATGATGAATCTCAGATATGGGAATCAAC 1316
Query 1317 AGAGAGTATGATGTTAAGAAACCGCGAGACATGGCCAAGTGTGTCCTTCATTGGTGGTTC 1376
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1317 AGAGAGTATGATGTTAAGAAACCGTGAGACATGGCCAAGTGTGTCCTTCATTGGTGGTTC 1376
Query 1377 AGTGGTAAATGAGACAGTATATAAAGTATACGAAAGCGCGAGTTCTTTGTCTTTAGCTAC 1436
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1377 TGTGGTAAATGAGACAGTATATAAAGTATACGAAAGCGCGAGTTCTTTGTCTTTAGCTAC 1436
Query 1437 GTTTGCTTCCCTTCTCATCGAGTTTGTTGCAAGGCTGGAGAACCTTGTAAACGCCTTTGA 1496
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1437 GTTTGCTTCCCTTCTCATCGAGTTTGTTGCAAGGCTGGAGAACCTTGTAAACGCTTTTGA 1496
Query 1497 GGAGCTAAGCAGAAAAGCAGATTTCAAAGATCCGGTTCTTGTTAACGTAGTGGATCAAG- 1555
||||||||||| |||||||||||||| ||| ||||||| | ||||||||||||||||||
Sbjct 1497 GGAGCTAAGCACAAAAGCAGATTTCAGAGACCCGGTTCCTCTTAACGTAGTGGATCAAGA 1556
Query 1556 -G-ATTATGGACAAGACTCATGAGACTTAGGAGACTTAGGAGATACTTTAGCAGAAGTTA 1613
| ||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct 1557 AGGATTATGGACAACACTCATGAGACTTAGGAGACTTAGGAGATATTTTGGCAGAAGTTA 1616
Query 1614 AAAC 1617
||||
Sbjct 1617 AAAC 1620
> AT1G68600.1 | Symbols: | Aluminium activated malate transporter
family protein | chr1:25759842-25762934 FORWARD LENGTH=1875
Length=1875
Score = 1314 bits (711), Expect = 0.0
Identities = 1233/1475 (84%), Gaps = 75/1475 (5%)
Strand=Plus/Plus
Query 95 TGGGACATTCAGATCGTA-GAAGGATC-TT-CTTCGCGGTCAAGATGGGAATGGCTCTT- 150
|||||||||| ||||||| ||| | | || |||| | ||||||||||||| ||| ||
Sbjct 251 TGGGACATTCTGATCGTAGGAA--A-CTTTACTTCTCCATCAAGATGGGAATTGCT-TTG 306
Query 151 GCCCTCTGCTCCATT-GTTATCTTCCTCAAAGAGCCG-TTGCATGATGCTAGTAAATACT 208
|| ||||| | | || || ||||| |||||||||||| || || ||||||||||||| |
Sbjct 307 GCACTCTG-TTCTTTCGTCATCTTTCTCAAAGAGCCGCTT-CAAGATGCTAGTAAATTCG 364
Query 209 CTGTATGGGGC-ATCCTCACTGT-GGTCGTGGTTTTCGAGTATTACGTAGGAGCAACTTT 266
| || | |||| || ||||| || | || | |||||||||||||||| |||||||||||
Sbjct 365 CAGT-TTGGGCGATTCTCACCGTCGTTC-TCATTTTCGAGTATTACGTCGGAGCAACTTT 422
Query 267 GGTCAAAGGATTCAACAGAGCGA-TAGGCACGGTATCT-GCTGGAGGACTCGCTCTTGGC 324
||| ||||||||||| ||||| | ||||||| | | | ||||||||||| ||||| |||
Sbjct 423 GGTTAAAGGATTCAATAGAGC-ATTAGGCACAATGT-TAGCTGGAGGACTTGCTCTCGGC 480
Query 325 ATCGCG-AGGCTCTCTGTTTTATCAGGAGA-TTTAG-AGCAAGCCATCATCATAATCTGC 381
||||| | ||||||||||||| ||||||| ||| | || ||| ||||||| ||||||||
Sbjct 481 GTCGCGCA-GCTCTCTGTTTTAGCAGGAGAGTTT-GAAG-AAGTCATCATCGTAATCTGC 537
Query 382 ATTTTCCTTGCAGGTTTCATTTCTAGTTATTCGAAACTCCACCCGGCCATGAAACCATAT 441
|| |||||||||||||| | ||||||||| |||||| || || |||||||||||||
Sbjct 538 ATATTCCTTGCAGGTTTTGGTGCTAGTTATTTGAAACTATACGCGTCCATGAAACCATAC 597
Query 442 GAATATGCATTCAGGGTGTTCTTGTTGACAT-TCTGTATTGTTCTGGTTTCGGGGAACAA 500
||||| |||||||| |||||| |||||||| | ||||| ||||| ||||| ||||||||
Sbjct 598 GAATACGCATTCAGAGTGTTCAAGTTGACATAT-TGTATCGTTCTTGTTTCCGGGAACAA 656
Query 501 -TACCGGAGATTTCTTCAGCACAGCGTATTACAGGTTTTTGTTTATTGTTATTGGTGCAA 559
| | |||| ||||| ||||| || ||||||||| ||||| |||||| | |||||||||
Sbjct 657 CT-CAAGAGACTTCTTAAGCACTGCTTATTACAGGATTTTGCTTATTGGTCTTGGTGCAA 715
Query 560 CCACATGTTTGGTTGTGAATATATTCATATTTCCGATATGGGCCGGGGAAGATCTCCATA 619
||| |||||| |||||||| |||| ||||||||||||||||||| |||||||||||||
Sbjct 716 CCATTTGTTTGCTTGTGAATGTATTTTTATTTCCGATATGGGCCGGAGAAGATCTCCATA 775
Query 620 AACTGGTGGCCAATAATTTCAAGAGTGTGGCAAATTCCCTAGAAGGATGTGCTAATGGCT 679
|||||||||| || || ||||||| ||| |||||||||||||||||||||| |||||| |
Sbjct 776 AACTGGTGGCTAAAAACTTCAAGAATGTTGCAAATTCCCTAGAAGGATGTGTTAATGGTT 835
Query 680 ATTTGCAATGTGTGGAATACGAGAGAGTACCCTCGAAGATTCTCACGTACCAAACATCTG 739
| ||||||||||| |||||||||||| |||| |||||||| |||||||||||| | || |
Sbjct 836 ACTTGCAATGTGTCGAATACGAGAGAATACCGTCGAAGATACTCACGTACCAAGCTTCAG 895
Query 740 ATGATCCATTATATAGTGGGTACAGGTCCGCTATTCAATCAACAAATCAAGAAGAATCTC 799
||||||||||||| || |||||||| |||||| ||||||| |||| |||||||| |||
Sbjct 896 ATGATCCATTATACAGCGGGTACAGATCCGCTGTTCAATCTACAAGCCAAGAAGATTCTT 955
Query 800 TGCTCGATTTTGCCATATGGGAGCCTCCACATGGACCTTACAGAACGTTTAACCATCCAT 859
|||| ||||| || |||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct 956 TGCTTGATTTCGCTATATGGGAGCCTCCACATGGACCTTACAAAACGTTTAACCATCCTT 1015
Query 860 GGAAAAACTATGTCAAACTTAGTGGTGCATTAAGGCATTGTGCTTTCACCGTCATGGCAA 919
||||||||||||||||||||||||||||| | |||||||| || ||||| ||||||||||
Sbjct 1016 GGAAAAACTATGTCAAACTTAGTGGTGCAGTGAGGCATTGCGCGTTCACAGTCATGGCAA 1075
Query 920 TACATGGTTGCATTCTTTCAGAGATACAGGCAGCTCCAGAGAAACGACAGGCTTTCCGTC 979
| ||||| |||||||||||||| ||||||||| ||||||||||| |||| | |||| ||
Sbjct 1076 TGCATGGATGCATTCTTTCAGAAATACAGGCATCTCCAGAGAAAAGACATGTTTTCAGTA 1135
Query 980 ATGAGCTTCAAAGAGTTGGCAATGAAGGCGCAAAAGT-TCTGCGTTTGATTGGAGACAAA 1038
| ||||||| |||||||| |||||||| |||||||| | | |||||| ||||||| |||
Sbjct 1136 ACGAGCTTCGGAGAGTTGGTAATGAAGGAGCAAAAGTAT-TACGTTTGTTTGGAGAAAAA 1194
Query 1039 GTGGAGAAAATGGAGAAGCTAAGCC----CC-AGG-GAGATTCT-AAATGACGTTCAACT 1091
|| |||||||||||||||||||||| || ||| |||||||| ||| ||||||||||
Sbjct 1195 GTAGAGAAAATGGAGAAGCTAAGCCTAAGCCTAGGAGAGATTCTGAAA-GACGTTCAACG 1253
Query 1092 TGCAGCAGAGG-AGCTACAGATGAAAATAGACAGTAAATCCTACCTTCTTGTGAACTCAG 1150
|||||| |||| | ||||| ||||||||||| |||||||| || |||||||| |||||||
Sbjct 1254 TGCAGCTGAGGCA-CTACAAATGAAAATAGATAGTAAATCATATCTTCTTGTCAACTCAG 1312
Query 1151 AAAGCTGGGCGGCTACTAAAGAGCAAGCTGAAGCTGAAGTAGAT-GA-A----GA--A-G 1201
|||||||||| |||| |||||||||||||||||| |||| || | || | || | |
Sbjct 1313 AAAGCTGGGCAGCTATTAAAGAGCAAGCTGAAGCGGAAGAAGCTCGAGAAAACGACCAAG 1372
Query 1202 AAGCT-----C-ACGAGACCAAAGTGATCAAATCCTTAAGTCAGATTTGGGATACCAGCA 1255
|||| | |||||||||||||||||||||||||||| |||||||||||||| | ||
Sbjct 1373 AAGCCAAAGACGACGAGACCAAAGTGATCAAATCCTTAAGCCAGATTTGGGATACTAACA 1432
Query 1256 GTAGCAGCAACAACCAGAATCCAACTAGTGGTAATGATGAATCTCAG-ATATGGGAA-TC 1313
| || ||||||||| || | ||| |||||| |||||||| || ||| | ||
Sbjct 1433 --A-CAACAACAACCA---TC-AG--AGT---AATGATCAATCTCAGCAT-TGG-ATGTC 1478
Query 1314 AACAGAGAGTATGATGTTAA-GAAACCGCGAGACATGGCCAAGTGTGTCCTTCATTGGTG 1372
|||||||||||||||||||| ||| ||| |||| ||||||||| |||||||||||| ||
Sbjct 1479 AACAGAGAGTATGATGTTAAAGAA-CCGAGAGATGTGGCCAAGTATGTCCTTCATTGATG 1537
Query 1373 GTTCAGTGGTAAATGAGACAGTATATAAAGTATACGAAAGCGCGAGTTCTTTGTCTTTAG 1432
|| | ||||| ||||||| || || ||||||||||||||| |||||||| |||||| | |
Sbjct 1538 GTACTGTGGTGAATGAGATAGAATGTAAAGTATACGAAAGTGCGAGTTCGTTGTCTCTGG 1597
Query 1433 CTACGTTTGCTTCCCTTCTCATCGAGTTTGTTGCAAGGCTGGAGAACCTTGTAAACGCCT 1492
||||||| ||||||||||| || |||||||||||||||||| | ||| |||| || || |
Sbjct 1598 CTACGTTCGCTTCCCTTCTGATTGAGTTTGTTGCAAGGCTGCAAAACATTGTCAATGCTT 1657
Query 1493 TTGAGGAGCTAAGCAGAAAAGCAGATTTCAAAGAT 1527
|||||||||| |||| |||||| | ||||||||||
Sbjct 1658 TTGAGGAGCTTAGCACAAAAGCTGGTTTCAAAGAT 1692
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 80019668730
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5