BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg319858
Length=1044
Score E
Sequences producing significant alignments: (Bits) Value
AT2G19060.1 | Symbols: | SGNH hydrolase-type esterase superfam... 1519 0.0
AT2G19050.1 | Symbols: | GDSL-like Lipase/Acylhydrolase superf... 1090 0.0
> AT2G19060.1 | Symbols: | SGNH hydrolase-type esterase superfamily
protein | chr2:8257000-8260545 FORWARD LENGTH=1811
Length=1811
Score = 1519 bits (822), Expect = 0.0
Identities = 978/1053 (93%), Gaps = 12/1053 (1%)
Strand=Plus/Plus
Query 1 ATGGCCGAGAAAATGTTCAAAGCATTGTTGTGGGCTTTTGCCACGGCGGTTGTAATGGCC 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 32 ATGGCCGATAAAATGTTCAAAGCATTGTTGTGGGCTTTTGCCACGGCGGTTGTGATGGCC 91
Query 61 GAGGCGGTTCGTGGACAACGAGTGCCTTGCTATTTCGTATTCGGAGACTCCGTCTTCGAC 120
||||| ||||||||||||| ||| |||||||||||||| ||||||||||| |||||||||
Sbjct 92 GAGGCTGTTCGTGGACAACTAGTCCCTTGCTATTTCGTTTTCGGAGACTCTGTCTTCGAC 151
Query 121 AATGGTAACAACAATGACTTGGATACATTGGCCAAAGTCAACTATTCGCCTTACGGTATT 180
||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||
Sbjct 152 AATGGTAACAACAATGAGTTGGATACCCTGGCCAAAGTCAACTATTCACCTTACGGTATT 211
Query 181 GATTTTGCTAGAGGTCCTACCGGCCGGTTCAGCAATGGTCGTAATATTCCCGACTTTATT 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 212 GATTTTGCTAGAGGTCCTACCGGGAGGTTCAGCAATGGTCGTAATATTCCCGACTTTATC 271
Query 241 GCTAAAGAAGTGGGATTTAAATATGACATTCCACCATTCATCAGAGCGTCGACGGAACAA 300
||| ||||| || || ||| ||||||||||||||||||| |||||| ||||||||||||
Sbjct 272 GCTGAAGAATTGAGAATTAGTTATGACATTCCACCATTCACCAGAGCATCGACGGAACAA 331
Query 301 GCTCACACCGGAATAAACTACGCTTCTGGTGGTGCCGGACTTCTCGAAGAAACTAGCCAA 360
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 332 GCTCACACCGGAATAAATTACGCTTCTGGTGGTGCCGGACTTCTCGAAGAAACTAGCCAA 391
Query 361 CATTTAGGTGAAAGAATCAGTTTTGAAAAGCAAATAACGAATCACCGGAACATGATTTTG 420
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||
Sbjct 392 CATTTAGGTGAAAGAATCAGTTTTGAAAAGCAAATAACTAATCACCGGAAGATGATTATG 451
Query 421 ACGGCGGGAGTTCCACCGGAGAAGCTTAAGAAGTGTCTATATACAATTAATATTGGAAGC 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 452 ACGGCGGGAGTTCCACCGGAGAAGCTTAAGAAGTGTCTATATACAATTAATATTGGAAGC 511
Query 481 TATGATTATCTCAACAACTATTTCATGCCGGCTCCATACACTACCAATGGCAATTTCAGT 540
|||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct 512 AATGATTATCTCAACAACTATTTCATGCCGGCTCCCTACACTACCAATGAAAATTTCAGT 571
Query 541 TTCGATGGATATGCTGATTATCTAATTCGAAGTTATCGCTCTTATTTGAAGTCATTGTAC 600
||||||| ||||||||||| ||| |||| |||||||||||||||||||||||||||||||
Sbjct 572 TTCGATGAATATGCTGATTTTCTCATTCAAAGTTATCGCTCTTATTTGAAGTCATTGTAC 631
Query 601 GTCTTAGGAGCAAGGAAAGTGGCGGTGTTTGGGGTGAGTAAGCTTGGCTGCACGCCGCGG 660
||||||||||||||||| || ||||| |||||||||||||||||||| ||||||||||||
Sbjct 632 GTCTTAGGAGCAAGGAAGGTAGCGGTCTTTGGGGTGAGTAAGCTTGGGTGCACGCCGCGG 691
Query 661 ATGATTGCCTCCCATGGTGGAGGTAAAGGCTGCGCTGCTGAAGTAAACAAAGCGGTCGAA 720
||||| |||||||||||||||||||||||||||||| ||||||| |||||||| ||||||
Sbjct 692 ATGATCGCCTCCCATGGTGGAGGTAAAGGCTGCGCTACTGAAGTGAACAAAGCTGTCGAA 751
Query 721 CCTTTCAACAAGAACCTCAAAGCTCTCGCAT-T-TGAATTCAATAGAAAC--T-TTGCTG 775
|||||||||||||| || |||| |||| || | ||||||||| |||| | | ||| ||
Sbjct 752 CCTTTCAACAAGAAACTTAAAGATCTC--ATCTCTGAATTCAACAGAATCAGTGTTGTTG 809
Query 776 AT---GCTAAGTTCACCTTCGTTGATCTTTTCAGCAGCCAAAATCCTATTGAGTATTTCA 832
|| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 810 ATCATGCTAAGTTCACCTTTGTTGATCTTTTCAGCAGCCAAAATCCTATTGAGTATTTCA 869
Query 833 TTTTAGGGTTTACGGTAACAGACAAAAGTTGTTGTACGGTAGAATCAGGGCAAGAACTTT 892
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 870 TTTTAGGATTTACGGTAACAGACAAAAGTTGTTGTACGGTAGAATCAGGGCAAGAACTTT 929
Query 893 GTGCGGCAAATAAACCGGCTTGTCCGAATCGAGGACAGTACGTGTACTGGGACAATGTCC 952
|||| ||||||||||||| |||||||||||||| || |||||| ||||||||||||||||
Sbjct 930 GTGCCGCAAATAAACCGGTTTGTCCGAATCGAGAACGGTACGTCTACTGGGACAATGTCC 989
Query 953 ACAGCACAGAAGCAGCTAATAAGGTTGTTGCAGAGGCTGCGTTTGTCGGACTCATTACGT 1012
| ||||||||||||||||||||||| |||| | |||||||||||| ||||||||||||||
Sbjct 990 ATAGCACAGAAGCAGCTAATAAGGTCGTTGTAAAGGCTGCGTTTGCCGGACTCATTACGT 1049
Query 1013 CTCCT-TACAGTATTTTACTGCTTACACTATAA 1044
||||| || || |||||||||||| |||||||
Sbjct 1050 CTCCTATA-AGCATTTTACTGCTTGTACTATAA 1081
> AT2G19050.1 | Symbols: | GDSL-like Lipase/Acylhydrolase superfamily
protein | chr2:8253416-8255534 FORWARD LENGTH=1050
Length=1050
Score = 1090 bits (590), Expect = 0.0
Identities = 901/1047 (86%), Gaps = 37/1047 (4%)
Strand=Plus/Plus
Query 1 ATGGCCGAGAAAATGTTCAAAGCATTGTTG-TGGGC-TTTTG-CCACGGCGGTTGTAATG 57
||||||||| ||| |||||||| |||||| ||| | || | |||| || ||| || |
Sbjct 1 ATGGCCGAGGCAATATTCAAAGCGTTGTTGTTGGTCATTGCGACCACCGCATTTGCAACG 60
Query 58 GCCGAGGCGGTTCGTGGACAACGAGTGCCTTGCTATTTCGTATTCGGAGACTCCGTCTTC 117
||||||||| || |||||| ||||||||||||||||| || ||||||||||||||||||
Sbjct 61 ACCGAGGCGGCTCTTGGACAGCGAGTGCCTTGCTATTTTGTTTTCGGAGACTCCGTCTTC 120
Query 118 GACAATGGTAACAACAATGACTTGGATACATTGGCCAAAGTCAACTATTCGCCTTACGGT 177
||||||||||||||||||| | || |||| | |||||||||||||||||| || ||||||
Sbjct 121 GACAATGGTAACAACAATGTCCTGAATACCTCGGCCAAAGTCAACTATTCACCCTACGGT 180
Query 178 ATTGATTTTGCTAGAGGTCCTACCGGCCGGTTCAGCAATGGTCGTAATATTCCCGACTTT 237
||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||| ||
Sbjct 181 ATTGATTTTGCTAGAGGTCCTACCGGCCGTTTCAGCAATGGTCGTAACATTCCTGACATT 240
Query 238 ATTGCTAAAG--AAGTGGGATTTAAAT-ATGACATTCCACCATTCATC-AGAGCGTCGA- 292
|| ||| || || || || || | | || |||||||||| |||| | |||| || |
Sbjct 241 ATCGCT-GAGCTAA-TGAGA-TTCAGTGATTACATTCCACCGTTCA-CGGGAGCATC-AC 295
Query 293 CGGAACAAGCTCACACCGGAATAAACTACGCTTCTGGTGGTGCCGGACTTC-TCGAAGAA 351
||||||||||||||| |||||||||||||||||||||||| | |||| | | | ||||||
Sbjct 296 CGGAACAAGCTCACATCGGAATAAACTACGCTTCTGGTGGAGGCGGAATACGT-GAAGAA 354
Query 352 ACTAGCCAACATTTAGGTGAAAGAATCAGTTTTGAAAAGCAAATAACGAATCACCGGAAC 411
|||||||||||||| ||||||| |||||||||| |||||||||||| |||||||||| |
Sbjct 355 ACTAGCCAACATTTGGGTGAAATAATCAGTTTTAAAAAGCAAATAAAGAATCACCGG-TC 413
Query 412 -ATGATTTTGACGGCGGGA-GTTCCACCGGAGAAGCTTAAGAAGTGTCTATATACAATTA 469
|||||| ||||||| | |||||| ||||||||| || || |||||||| |||||||
Sbjct 414 GATGATTATGACGGC-TAAGGTTCCAGAGGAGAAGCTGAATAAATGTCTATACACAATTA 472
Query 470 ATATTGGAAGCTATGATTATCTCAACAACTATTTCATGCCGGCTCCATACACT-ACCAAT 528
||||||||||| |||||||||||||||||||||| |||||||||||||| | | ||||||
Sbjct 473 ATATTGGAAGCAATGATTATCTCAACAACTATTTTATGCCGGCTCCATATA-TGACCAAT 531
Query 529 -GGCAATTTCAGTTTCGATGGATATGCTGATTATCTAATTCGAAGTTATCGCTCTTATTT 587
| || ||||||||||||| |||||| |||| ||| |||||||||||||||||||||||
Sbjct 532 AAG-AAGTTCAGTTTCGATGAATATGCAGATTCTCTCATTCGAAGTTATCGCTCTTATTT 590
Query 588 GAAGTCATTGTACGT-CTTAGGAGCAAGGAAAGTGGCGGTGTTTGGGGTGAGTAAGCTTG 646
||||||||||||||| || |||||||||||| || || |||||||||||||||||||| |
Sbjct 591 GAAGTCATTGTACGTTCT-AGGAGCAAGGAAGGTCGCTGTGTTTGGGGTGAGTAAGCTCG 649
Query 647 GCTGCACGCCGCGGATGATTGCCTCCCATGGTGGAGGTAAAGGCTGCGCTGCTGAAGTAA 706
| ||||||||||| |||||||||||||||||||| ||||| || || ||||||||||| |
Sbjct 650 GATGCACGCCGCGTATGATTGCCTCCCATGGTGGTGGTAATGGTTGTGCTGCTGAAGTGA 709
Query 707 ACAAAGCGGTCGAACCTTTCAACAAGAACCTCAAAGCTCTCG-CATTTGAATTCAATAGA 765
||||||| || ||||||||||| ||||||||||||||||| | | | ||||||||| ||
Sbjct 710 ACAAAGCTGTAGAACCTTTCAATAAGAACCTCAAAGCTCTTGTC-TATGAATTCAACCGA 768
Query 766 AACTTTGCTGATGCTAAGTTCACCTTCGTTGATCT-TTTCAGCAGCCAAAATCCTATT-G 823
| |||||||||||||||||||||||||||||| | ||| ||| |||||| |||| || |
Sbjct 769 GATTTTGCTGATGCTAAGTTCACCTTCGTTGATATCTTT-AGCGGCCAAAGTCCT-TTCG 826
Query 824 AGTATTTCATTTTAGGGTTTACGGTAACAGACAAAAGTTGTTGTACGGTAGAATCAGGGC 883
|| |||||| |||||||||| |||||||||||||||||||||||||||| || |||||
Sbjct 827 CGTTTTTCATGTTAGGGTTTAGGGTAACAGACAAAAGTTGTTGTACGGTAAAACCAGGGG 886
Query 884 AAGAACTTTGTGCGGCAAATAAACCGG-CTTGTCCGAAT-CGAGGACAGTACGTGTACTG 941
|||||||||||||| ||||| |||||| || |||| | | | | ||| ||| ||||||||
Sbjct 887 AAGAACTTTGTGCGACAAATGAACCGGTCT-GTCC-AGTTCAAAGACGGTATGTGTACTG 944
Query 942 GGACAATGTCCACAGCACAGAAGCAGCTAATAAGGTTGTTGCAGAGGCTGCGTT-TGTCG 1000
||||||||||||||||||||||||||| |||| ||| |||||| ||||||| || || ||
Sbjct 945 GGACAATGTCCACAGCACAGAAGCAGCCAATATGGTGGTTGCAAAGGCTGC-TTATGCCG 1003
Query 1001 GACTCATTACGTCTCCTTACAGTATTT 1027
||||||||||||||||||||||| |||
Sbjct 1004 GACTCATTACGTCTCCTTACAGTCTTT 1030
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 51188595793
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5