BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg320010 Length=1059 Score E Sequences producing significant alignments: (Bits) Value AT2G21610.1 | Symbols: PE11, ATPE11 | pectinesterase 11 | chr2:... 1554 0.0 > AT2G21610.1 | Symbols: PE11, ATPE11 | pectinesterase 11 | chr2:9245161-9247025 REVERSE LENGTH=1059 Length=1059 Score = 1554 bits (841), Expect = 0.0 Identities = 988/1059 (93%), Gaps = 9/1059 (1%) Strand=Plus/Plus Query 1 ATGGGTCTTTATAAAACAAAGTCCAAACGTTCAATTGCTAACTATTATCATATCATACTC 60 ||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||| || Sbjct 1 ATGGGACTTTATAAAACGAAGTCCAAACGTTCAATTGCTAACTATCATCATATCATAATC 60 Query 61 ATCAATATTTTCATTCTCTCTTCAATCACATTTTCATCCATGGCTTCTTCTAATTCTTCT 120 |||||||||||||| |||||||||||||||| ||| |||||||||||||| ||||||| Sbjct 61 ATCAATATTTTCATCCTCTCTTCAATCACATCTTCTTCCATGGCTTCTTC---TTCTTCT 117 Query 121 TCGTCTTCCATTGATTTTTCTACTGCAATTCTAATAAGGGTTGATCAATCGGGCAAAGGA 180 | ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct 118 CCATCTTCCATTGATTTTTCGACTGCAATTCTAATAAGAGTTGATCAATCGGGCAAAGGA 177 Query 181 GACTTCAGTAAGATTCAAGAAGCAATAGAATCTATCCCTCCCAATCTAAACAACTCTCAA 240 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 178 GACTTCAGTAAGATTCAAGAAGCAATTGAATCTATCCCTCCCAATCTAAACAACTCTCAA 237 Query 241 CTCTATTACATTTGGGTTAAGCCTGGAATTTACCGAGAAAAGGTGGTGATTCCTGCGGAT 300 ||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct 238 CTCTATTTCATTTGGGTTAAGCCTGGAATTTACCGAGAAAAAGTGGTGATACCTGCGGAG 297 Query 301 AAACCCTACATAACATTGAGTGGAACACAAGCTTCCAACACCTTTCTCATATGGAGCGAT 360 ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct 298 AAACCCTACATAACATTGAGTGGGACACAAGCTTCCAACACTTTTCTCATATGGAGCGAT 357 Query 361 GGTGGAGACATTTTGGAATCACCCACTCTCACAATATTTGCCA-CCGATTTCGTATGTCG 419 || | ||||||||||||||||||||||||||| || |||| || ||||||| ||||| || Sbjct 358 GGCGAAGACATTTTGGAATCACCCACTCTCACTATCTTTG-CATCCGATTTTGTATGCCG 416 Query 420 ATTTCTCACTATTCAGAATAAGCTTGGAACGGCGGGACGGGCGGTTGCACTGCGGGTGGC 479 |||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||| Sbjct 417 ATTTCTCACTATTCAGAATAAGTTTGGAACGGCGGGACGTGCGGTTGCACTGAGGGTGGC 476 Query 480 AGCGGATAAGGCAGCGTTCTATGGATGCGTGATAACATCGTACCAAGACACTCTCCTTGA 539 |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct 477 GGCGGATAAGGCAGCGTTCTACGGATGCGTGATAACGTCGTACCAAGACACTCTCCTTGA 536 Query 540 CGACAATGGAAACCATTACTTCAAGAACTGCTATATTGAAGGAGCCACCGATTTCATTTG 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 537 CGACAATGGAAACCATTACTTCAAGAACTGCTATATTGAAGGAGCCACCGATTTCATTTG 596 Query 600 TGGAAGCGCTTCTTCTCTCTATGAAAGATGTCATCTACACTCGTTGTCACCGACTAAAGG 659 |||||||||||||||||| |||||||| |||||| ||||||||||||| |||| ||| || Sbjct 597 TGGAAGCGCTTCTTCTCTATATGAAAGGTGTCATTTACACTCGTTGTCGCCGAATAATGG 656 Query 660 GTCTATAACGGCGCAAATGAGAACGTCGGCGACGGAGAAATCAGGGTTTATATTCTTGGG 719 |||||||||||||||||||||||||||||| || ||||||||||| |||| ||||||||| Sbjct 657 GTCTATAACGGCGCAAATGAGAACGTCGGCCACAGAGAAATCAGGCTTTACATTCTTGGG 716 Query 720 ATGCAAGTTAACCGGATCCA-GTTCCACGTATTTGGGAAGGCCATGGGGACCTTATTCTA 778 |||||||||||| |||| || ||||||| | ||||||||| ||||||||| ||||||||| Sbjct 717 ATGCAAGTTAACTGGAT-CAGGTTCCACATTTTTGGGAAGACCATGGGGAGCTTATTCTA 775 Query 779 GGGTTATCTTTGCTTATTCCTTCTTCTCCAATGTCGTCGCACCTCGAGGGTGGAACCAAT 838 ||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct 776 GGGTTGTCTTTGCTTATTCCTTCTTCTCCAATGTCGTCGCACCTCAAGGATGGAACCAAT 835 Query 839 GGGGAGATTCAACCAAAGAAAATACCGTATATTATGGTGAATACAAATGTTACGGTCCCG 898 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct 836 GGGGAGATTCAACCAAAGAAAATACTGTATATTATGGTGAATACAAATGTTATGGTCCCG 895 Query 899 GAGCAGACAGGGGACAAAGAGTAAAATGGTCAAAACAATTATCCGACGACGAAGCTACCG 958 |||||||||||| |||||||||| ||||||||||||| ||||| || || |||||||||| Sbjct 896 GAGCAGACAGGGAACAAAGAGTAGAATGGTCAAAACAGTTATCGGATGAAGAAGCTACCG 955 Query 959 TCTTCTTGAGCAAGGACTTTATCGGCGGCAAAGACTGGCTCCGACCTGCCCCTTCCCACT 1018 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 956 TCTTCTTGAGCAAGGACTTTATCGGCGGCAAAGACTGGCTCCGACCTGCCCCTTCTCACT 1015 Query 1019 TCAAAAAATGGTCCCAAATAAACCCGAAAATATATAAAT 1057 |||| || || ||||||| |||||| |||||| | |||| Sbjct 1016 TCAAGAA-TGCTCCCAAACAAACCC-AAAATAAAGAAAT 1052 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 51857162985 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5