BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg320059 Length=441 Score E Sequences producing significant alignments: (Bits) Value AT2G22150.1 | Symbols: | pseudogene, hypothetical protein | ch... 237 7e-62 > AT2G22150.1 | Symbols: | pseudogene, hypothetical protein | chr2:9421683-9422858 REVERSE LENGTH=1176 Length=1176 Score = 237 bits (128), Expect = 7e-62 Identities = 153/165 (93%), Gaps = 2/165 (1%) Strand=Plus/Plus Query 264 AGTGGAGGGATGGCCTAATGCAACAACTAATAATAATGGATGGGGTTACGAGAAGTTTGT 323 |||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 1012 AGTGGATGGATGGCCTAATGCAACAGCTAATAATAATGGATGGGGTTTCGAGAAGTTTGT 1071 Query 324 ATCACTTGCTGATCTTAAAGATGCATCTAAAGGTTTAGTGGTGGACGATGCGATTAAGGT 383 | || |||| ||||||||| ||||||||||||||||||||||||| |||||| | ||||| Sbjct 1072 ACCATTTGCAGATCTTAAAAATGCATCTAAAGGTTTAGTGGTGGAAGATGCGCTCAAGGT 1131 Query 384 TGAAGTCGAGTTCATTGGCTTCTCTAAAACA--GACTCCACCTTA 426 ||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1132 TGAAGTCGAGTTCATTGGCTTCTCTAAAACACAGACTCCACCTTA 1176 Score = 202 bits (109), Expect = 2e-51 Identities = 131/142 (92%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 124 AAGGTGTATCCAAATGGAGATGGTTATGGAAAGGGCAATTCATTGTCACTCTATTTGCTG 183 ||||| ||||||||||||||||||| || |||||||||||||| |||| |||||||| || Sbjct 785 AAGGTATATCCAAATGGAGATGGTTTTGTAAAGGGCAATTCATCGTCAGTCTATTTGTTG 844 Query 184 AGTGATTCTAATGAAAATGCTTATGTTCGAGCCAAGCTAAGAGTTCTGGACCAAATCCGA 243 || || ||||||||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct 845 AGCGAGTCTAATGAAAAGGCTTATGTTCGAGCCAAGCTAAGAGTTCTTGACCAAATCCGA 904 Query 244 TCCAACCACGTCGAGAAGCTAG 265 ||||||||||| |||||||||| Sbjct 905 TCCAACCACGTGGAGAAGCTAG 926 Score = 191 bits (103), Expect = 5e-48 Identities = 119/127 (94%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 2 TGGTTATGTTTCGCTTTACGCAAGAATCGATAACTCAACTCTCATCTCCGATCCAAAGGA 61 ||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 11 TGGATACGTTTCGCTTTACGCAAGAATCGATAACTCAACTCTCATCTCCAATCCAAAGGA 70 Query 62 TGTGTATGCAGAGGTCAAGTTCTTCGTCTACAACAGAGTCTACGACAAGTACTACACCTA 121 |||||| |||||||||||||||||||||||||||||| |||||||||| ||||| ||||| Sbjct 71 TGTGTACGCAGAGGTCAAGTTCTTCGTCTACAACAGAATCTACGACAAATACTATACCTA 130 Query 122 TCAAGGT 128 |||||| Sbjct 131 CCAAGGT 137 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 20961651333 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5