BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg320100 Length=684 Score E Sequences producing significant alignments: (Bits) Value AT2G22630.1 | Symbols: AGL17 | AGAMOUS-like 17 | chr2:9618372-9... 981 0.0 > AT2G22630.1 | Symbols: AGL17 | AGAMOUS-like 17 | chr2:9618372-9621957 FORWARD LENGTH=901 Length=901 Score = 981 bits (531), Expect = 0.0 Identities = 635/686 (93%), Gaps = 4/686 (1%) Strand=Plus/Plus Query 1 ATGGGGAGAGGGAAGACTGTGATCCAGAAGATCGATGATTCAACGAGTAGGCAAGTCACT 60 |||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||| Sbjct 1 ATGGGGAGAGGGAAGATTGTGATCCAGAAGATCGATGATTCCACGAGTAGACAAGTCACT 60 Query 61 TTCTCCAAAAGAAGAAAGGGTCTCATCAAGAAAGCTAAAGAACTCGCTATTCTCTGCGAC 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 61 TTCTCCAAAAGAAGAAAGGGTCTCATCAAGAAAGCTAAAGAACTTGCTATTCTCTGCGAC 120 Query 121 GCCGAGGTCTGTCTCATCATTTTCTCCAGTACCGACAAGCTCTATGACTTTGCCAGCTCC 180 |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct 121 GCCGAGGTCTGTCTCATCATTTTCTCCAACACTGACAAGCTCTATGACTTTGCCAGCTCC 180 Query 181 AGTGTGAAATCTACTATTGAACGATTCAATACGACCAAGATGGAGCAGCAACAACTACTC 240 ||||||||||||||||||||||||||||||||| | ||||||||| ||||| ||||| | Sbjct 181 AGTGTGAAATCTACTATTGAACGATTCAATACGGCTAAGATGGAGGAGCAAGAACTAATG 240 Query 241 AACCCTGCATCAGAAGTTAAGTTTTGGCAGAGAGAGGCTGAAACTCTAAGGCAAGAATTG 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 AACCCTGCATCAGAAGTTAAGTTTTGGCAGAGAGAGGCTGAAACTCTAAGGCAAGAATTG 300 Query 301 CACTCGCTGCAAGAAAATCATCGGCACCTAACGGGAGAGCAATTAAATGGTTTGAGCGTT 360 ||||| ||||||||||| ||||||| |||||||||| | |||||||||||||||||||| Sbjct 301 CACTCATTGCAAGAAAATTATCGGCAACTAACGGGAGTGGAATTAAATGGTTTGAGCGTT 360 Query 361 AAGGAGTTACGCAATC-TCGAGAGCCAACTTGAAATGAGTTTACGTGGAATTCGTATGAA 419 |||||||||| || | | ||||| ||||||||||||||||||||||||||||||||||| Sbjct 361 AAGGAGTTACAAAA-CATAGAGAGTCAACTTGAAATGAGTTTACGTGGAATTCGTATGAA 419 Query 420 AAGAGAACATATTTTGACCAATGAAATCAAAGAACTAACCAGAAAGAGGAGTCTTCTTCA 479 ||| ||||| ||||||||||||||||| ||||| |||||||||||||||| |||| |||| Sbjct 420 AAGGGAACAAATTTTGACCAATGAAATTAAAGAGCTAACCAGAAAGAGGAATCTTGTTCA 479 Query 480 TCATGAAAACCTCGAGATA-TCGAGAAAAGTGCAAAGGATTCATCAAGAAAATGTCGAAC 538 ||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||| Sbjct 480 TCATGAAAACCTCGA-ATTGTCGAGAAAAGTACAAAGGATTCATCAAGAAAATGTCGAAC 538 Query 539 TATACAAGCAGGTTTATGCAACGTCAAACACAAACGGATTGGGACACCATGAGCTAGTGG 598 |||||||| ||| ||||| |||||| |||||||| ||||||||||| ||||||||||| | Sbjct 539 TATACAAGAAGGCTTATGGAACGTCGAACACAAATGGATTGGGACATCATGAGCTAGTAG 598 Query 599 ATGGAGCCAATGAATCCCTTGTAGAGGTTAGGCTGCAGCTAAGCCAGCCTGAGCAGTCCC 658 ||| || ||||||||| || | |||||||||||||||||||||||||||||||||||| Sbjct 599 ATGCAGTTTATGAATCCCATGCACAGGTTAGGCTGCAGCTAAGCCAGCCTGAGCAGTCCC 658 Query 659 ATTATGAGACTTCTTCAAACAGCTAA 684 ||||| |||| ||||||||||||||| Sbjct 659 ATTATAAGACATCTTCAAACAGCTAA 684 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 33104302873 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5