BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg320279
Length=2715
Score E
Sequences producing significant alignments: (Bits) Value
AT2G24720.1 | Symbols: ATGLR2.2, GLR2.2 | glutamate receptor 2.... 3884 0.0
AT2G24710.1 | Symbols: ATGLR2.3, GLR2.3 | glutamate receptor 2.... 2981 0.0
AT2G24750.1 | Symbols: | pseudogene, similar to Avr9/Cf-9 rapi... 1206 0.0
> AT2G24720.1 | Symbols: ATGLR2.2, GLR2.2 | glutamate receptor
2.2 | chr2:10522783-10525840 REVERSE LENGTH=2763
Length=2763
Score = 3884 bits (2103), Expect = 0.0
Identities = 2499/2693 (93%), Gaps = 16/2693 (1%)
Strand=Plus/Plus
Query 1 ATGAGAAATGCGAAGCTTTTCTTTTGCTTCTTG--C-TCTTCTTCTCCTTCCGCTTGGAA 57
|||| |||| | ||||||||||| |||||||| | | ||||||| |||| | ||||||
Sbjct 1 ATGAAAAATTCAAAGCTTTTCTTCCGCTTCTTGTTCTTGTTCTTCTTCTTCTGTTTGGAA 60
Query 58 ATCGGCAGAGGACAGAACAACGGCAAAACCCAAGTCAATGTCGGTGTTGTAACAGATGTC 117
| | ||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 61 AGCAGCAGAGGACAGGACAACGGCAAAACCCAAGTCAACATCGGTGTTGTATCAGATGTC 120
Query 118 GGTACTTCACACTCGGAGGTTTCCATGCTCTGTATCAACATGTCTCTTACTGATTTCTAC 177
||||||||| || |||| ||| |||||||||| ||||| ||||||||| | |||||||||
Sbjct 121 GGTACTTCATACCCGGATGTTGCCATGCTCTGCATCAATATGTCTCTTGCCGATTTCTAC 180
Query 178 TCTTCTCGTCCCCAGTTTCAGACAAGGCTTGTCGTCAACGTTGGTGACTCCAAAAATGAC 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 TCTTCTCGTCCCCAGTTTCAGACAAGGCTTGTCGTCAACGTTGGTGACTCCAAAAATGAC 240
Query 238 GTTGTTGGTGCCGCAACTGCAGCTATTGAGT-TGATAAAGAACAAGCAAGTGAAAGCGAT 296
||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||| ||
Sbjct 241 GTTGTAGGTGCCGCAACTGCAGCTATTGA-TCTGATAAAGAACAAGCAAGTGAAAGCTAT 299
Query 297 TTTGGGCCCATGGACATCTATGCAAGCTCATTTCTTGATCGAGATTGGCCAAAAATCTCG 356
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 300 TTTGGGGCCATGGACATCTATGCAAGCTCATTTCTTGATCGAGATTGGCCAAAAATCTCG 359
Query 357 GGTTCCTGTTGTTTCCTATTCTGCAACAAGCCCATTTCTTACTTCCCTTCGTAG-CCGAT 415
||||||||||||||||||||||||||||||||||| ||||||||| || || || || ||
Sbjct 360 GGTTCCTGTTGTTTCCTATTCTGCAACAAGCCCATCTCTTACTTCTCTCCGCAGTCC-AT 418
Query 416 ACTTCTTGCGTGCTACGTACGAAGACTCTTCTCAAGTGCAGGCCATAAAATCTATCATCA 475
||||||| || ||||| || || ||||| ||||||||||| || |||||| |||| ||||
Sbjct 419 ACTTCTTCCGAGCTACATATGAGGACTCCTCTCAAGTGCATGCTATAAAAGCTATTATCA 478
Query 476 AATTGTTCGGGTGGAGAGAAGTTGTGCCAGTTTACATCGACAATACCTTCGGAGAAGGTA 535
| ||||| ||||||||||||||||||||||||||||||||||| || || ||||||||||
Sbjct 479 AGTTGTTTGGGTGGAGAGAAGTTGTGCCAGTTTACATCGACAACACTTTTGGAGAAGGTA 538
Query 536 TAATGCCTCGTCTCACCGATGCATTACAAGATATTAATGTTCGGATACCTCATAGATCCG 595
|||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 539 TAATGCCTCGTCTCACTGATTCATTACAAGATATTAATGTTCGGATACCTTATAGATCCG 598
Query 596 TTATCGCTCCCAATGCCACGGATCAAGAAATCTCCGTAGAACTTCTTAAGATGATGAACA 655
||||| ||| |||||||||||||||||| ||||| || || |||||||||||||||||||
Sbjct 599 TTATCCCTCTCAATGCCACGGATCAAGATATCTCTGTGGAGCTTCTTAAGATGATGAACA 658
Query 656 TGCCCACAAGAGTGTTCATTATCCACATGTCCTCTTCTCTAGCCTCAAGATTCTTCATTA 715
|||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||
Sbjct 659 TGCCCACAAGAGTGTTCATTGTCCACATGTCCTCTTCTCTAGCCTCAACAGTCTTCATTA 718
Query 716 AAGCAAAGGAGATTGGTTTGATGAAACCAGGATATGTCTGGATCCTTACCAATGGAGTTA 775
||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 719 AAGCAAAGGAGCTTGGTTTGATGAAACCAGGATATGTCTGGATCCTTACAAATGGAGTTA 778
Query 776 TCGATGGCTTAAGGTCGATAAATGAGACGGGTATTGAGGCTATGGAGGGGGTATTGGGTA 835
| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 779 TGGATGGCTTACGGTCGATAAATGAGACGGGTATTGAGGCTATGGAGGGGGTATTGGGTA 838
Query 836 TTAAAACTTATATTCAAAAATCCAAAGATCTAGACATGTTTAGATCACGGTGGAAGAGGA 895
||||||||||||||| |||||||||||||||||| | |||||||||||| ||||||||||
Sbjct 839 TTAAAACTTATATTCCAAAATCCAAAGATCTAGAAACGTTTAGATCACGTTGGAAGAGGA 898
Query 896 GATTCCCACAGATGGAGCTGAATGTCTATGGATTGTGGGCTTATGATGCTACCACTGCAT 955
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 899 GATTCCCACAGATGGAGCTGAATGTCTATGGATTGTGGGCTTATGATGCGACCACTGCAC 958
Query 956 TGGCCATGGCCATTGAAGAAGCTGGAATAAATAACATGACTTTCAGTAATGTGGATACAG 1015
||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |
Sbjct 959 TGGCCATGGCCATTGAAGATGCGGGAATAAATAACATGACTTTCAGTAATGTGGATACGG 1018
Query 1016 GGA-GAAACGTTTCCGAACTTGATGCTCTTGGTTTATCTCAATTCGGTCCAAAGCTTCTC 1074
||| ||| ||||| |||||||||| |||||||||||| ||||| |||||||||||||||
Sbjct 1019 GGAAGAAT-GTTTCTGAACTTGATGGTCTTGGTTTATCACAATTTGGTCCAAAGCTTCTC 1077
Query 1075 GAGACGCTCTCAAAAGTTCAATTCAGAGGACTTGCAGGAGACTTCCGTTTTGTCAGCGGG 1134
||||| |||||| |||||| |||| ||| |||||||||||||||| |||||||||||||
Sbjct 1078 CAGACGGTCTCAACAGTTCAGTTCAAAGGTCTTGCAGGAGACTTCCATTTTGTCAGCGGG 1137
Query 1135 CAACTGCAACCATCGGTGTTTGAAATTGTCAATATGGTCGGGGCCGGAGAAAGATCAATA 1194
||||||||||||||||||||||| |||||||||||| | || |||||||||| ||||||
Sbjct 1138 CAACTGCAACCATCGGTGTTTGAGATTGTCAATATGATTGGAACCGGAGAAAGGTCAATA 1197
Query 1195 GGATTCTGGACAGAGGGAAATGGTCTTGTGAAGAAACTTGACCAAGAACCACGAAGCATA 1254
||||| ||||| || ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1198 GGATTTTGGACGGAAGGAAATGGTCTTGTGAAGAAACTTGACCAAGAACCTCGAAGCATA 1257
Query 1255 GGTACTTTATCCACTTGGCAAGATCATCTTAAGCTTATAATATGGCCTGGAGAGGCTAAT 1314
||||||||||||||||||| |||||||||||| | ||||||||||||||||||||| |
Sbjct 1258 GGTACTTTATCCACTTGGCCAGATCATCTTAAACATATAATATGGCCTGGAGAGGCCGTT 1317
Query 1315 TCTGTTCCCAAAGGATGGGAGATCCCGACTAATGGGAAGAAGTTGCGCATTGGAGTTCCC 1374
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1318 TCTGTTCCGAAAGGATGGGAGATCCCGACTAATGGGAAGAAGTTGCGCATTGGAGTTCCC 1377
Query 1375 AAGAGACTTGGTTTCACTGATCTCGTGAAGGTCACAAGGGATCCTATCACCAATTCAACT 1434
|||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1378 AAGAGAATCGGTTTCACTGATCTCGTGAAGGTCACAAGGGATCCTATCACCAATTCAACG 1437
Query 1435 GTAGTCACAGGTTTCTGCATAGAtttttttGAGGCTGTGATTCAAGCAATGCCTTATGAC 1494
||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1438 GTAGTCAAAGGTTTTTGCATAGATTTTTTTGAGGCTGTGATTCAAGCAATGCCTTATGAC 1497
Query 1495 GTCTCTTATGAGTTCATTCCTTTTGAAACACCTGACGGTAAACCAGCCGGTAATCACAAT 1554
||||||||||||||| |||||||||||| ||| ||||| |||||||||||||||||||
Sbjct 1498 GTCTCTTATGAGTTCTTTCCTTTTGAAAAACCCAACGGTGAACCAGCCGGTAATCACAAC 1557
Query 1555 GACTTGGTCCAGCAAGTGTACCTCGGG-AGGTATGATGGGGTCGTGGGAGATACAACAAT 1613
||||||||||| ||||||||||||||| | | ||||| || || ||||||||||| ||
Sbjct 1558 GACTTGGTCCACCAAGTGTACCTCGGGCAATT-TGATGCCGTGGTCGGAGATACAACCAT 1616
Query 1614 ATTGGCGAACAGGTCCTCTTACGTTGACTTCACTCTCCCATTCATTAAATCAGGTGTTGG 1673
| |||||||||||||||||| |||||||| || ||||||||||| ||||||||||| ||
Sbjct 1617 ACTGGCGAACAGGTCCTCTTTTGTTGACTTTACACTCCCATTCATGAAATCAGGTGTGGG 1676
Query 1674 AATGATCGTCCCAATGAGAGACGAAGTGAAAAGAGACGAATTCAGCTTCTTGAAACCTTT 1733
| ||||||||||| ||| ||| ||||||||||||||| ||||||||||||||||||||||
Sbjct 1677 ATTGATCGTCCCATTGAAAGATGAAGTGAAAAGAGACAAATTCAGCTTCTTGAAACCTTT 1736
Query 1734 GTCGATCGAACTATGGTTGACATCCTTAGTCTTTTTCTTCCTTGTTTCAATCTC-TGTTT 1792
||| |||||||||||||||||| ||||||||||||||||||| ||| ||| | ||| |
Sbjct 1737 GTCAATCGAACTATGGTTGACAACCTTAGTCTTTTTCTTCCTAGTTGGAAT-TAGTGTAT 1795
Query 1793 GGACTCTTGAACATAGGGTTAATCCGGACTTCCGTGGACCGGCTAATTACCAAGCTAGTA 1852
||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||
Sbjct 1796 GGACTCTTGAACATAGGGTCAATTCGGACTTCCGTGGACCAGCTAATTACCAAGCTAGTA 1855
Query 1853 CCATCTTCTGGTTTGCCTTCTCTACCATGGTTTTTGCTCCAAGAGAGAGAGTGTTTAGCT 1912
|||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct 1856 CCATCTTCTGGTTTGCCTTCTCTACCATGGTTTTTGCTCCAAGAGAAAGAGTGCTTAGCT 1915
Query 1913 TCTGGGCGAGGGCCCTGGTTGTCACATGGTACTTCCTCGTTCTTGTGTTAACTCAGAGTT 1972
|| |||| ||| |||| |||||||||||||||||| || |||| ||||||||||||||||
Sbjct 1916 TCGGGGCAAGGTCCCTTGTTGTCACATGGTACTTCGTCCTTCTCGTGTTAACTCAGAGTT 1975
Query 1973 ACACAGCCAGTTTGGCGTCGCTTTTGACATCACAGCAACTACATCCAACCATAACCAGCA 2032
|||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct 1976 ACACAGCCAGTTTGGCGTCGCTTTTGACATCACAACAACTAAATCCAACCATAACCAGCA 2035
Query 2033 TGAGTAGCTTGCTTCATAAAGGAGAAACAATCGGTTATCAGAGAACATCCTTCATCCTTG 2092
|||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||
Sbjct 2036 TGAGTAGCTTGCTTCATAGAGGAGAAACAGTGGGTTATCAGAGAACATCCTTCATCCTTG 2095
Query 2093 GAAAGCTTAATGAAACAGGTTTCCCACAATCTAGCCTTGTGCCCTTTGATACCGCAGAAG 2152
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2096 GAAAGCTTAACGAAACAGGTTTCCCACAATCTAGCCTTGTGCCCTTTGATACCGCAGAAG 2155
Query 2153 AATGCGCCGAGCTTCTGAAAAAAGGATCAAAAAAGGGTGGTATCTCTGCAGCTTTCTTGG 2212
|||||| |||||||||||||||||| ||||||| |||||| | |||||||||||||||
Sbjct 2156 AATGCGATGAGCTTCTGAAAAAAGGACCAAAAAATGGTGGTGTGGCTGCAGCTTTCTTGG 2215
Query 2213 GA-C-C-TTACTTGAGACTCTTTCTTGGACAATATTGCAACACTTATAAAATGGTTGAAG 2269
|| | | |||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2216 GAACACCTTACGTGAGACTCTTTCTTGGACAATATTGCAACACTTATAAAATGGTTGAAG 2275
Query 2270 AACCCTTCAATGTTGATGGATTCGGCTTTGTTTTTCCAATCGGATCACCTCTGGTGGCCG 2329
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2276 AACCCTTCAATGTTGATGGATTCGGCTTTGTGTTTCCAATCGGATCACCTCTGGTGGCCG 2335
Query 2330 ATGTTTCAAGGGCCATCTTAAAAGTAGCAGAGTCTCCAAAGGCAATGGAGCTCGAGAACG 2389
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 2336 ATGTTTCAAGGGCCATCTTAAAAGTAGCAGAGTCTCCAAAGGCAGTGGAGCTCGAGCACG 2395
Query 2390 CATGGTTCAAGAAGAAAGAACAAAGTTGTCCTGATCCAGTTACCAATCCAGATTCAAATC 2449
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2396 CTTGGTTCAAGAAGAAAGAACAAAGTTGTCCTGATCCAGTTACCAATCCAGATTCAAATC 2455
Query 2450 CATCTGTTACCTCTATACAGCTCGGCGTACGCAGTTTCTGGTTTCTGTTTCTTGTTGTGT 2509
|| |||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 2456 CAACTGTTACCGCTATACAGCTCGGCGTAGGCAGTTTCTGGTTTTTGTTTCTTGTTGTGT 2515
Query 2510 TTGTTGTGTGCGTTCTAGCACTCGGAAAATTCACATTCTGTTTCCTATGGAAGACAAAAG 2569
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2516 TTGTTGTCTGCGTTCTAGCACTCGGAAAATTCACATTCTGTTTCCTATGGAAGACAAAAG 2575
Query 2570 GGAAAGATTTGTGGAAAGAGTTTCTAAAACGAGACCCCGACTCGTACATCAACGACATAG 2629
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2576 GGAAAGATTTGTGGAAAGAGTTTCTAAAACGAGACACCGACTCGTACATCAACGACATAG 2635
Query 2630 ATAAATGTTTGTGTTCTCGAGAGATGCCTGAGAACAGCAATAGAGCAACAAAC 2682
| ||||| |||||||||| |||||||||||| |||||||||| ||||||||||
Sbjct 2636 AGAAATGCTTGTGTTCTCAAGAGATGCCTGAAAACAGCAATAAAGCAACAAAC 2688
> AT2G24710.1 | Symbols: ATGLR2.3, GLR2.3 | glutamate receptor
2.3 | chr2:10516880-10520549 REVERSE LENGTH=2688
Length=2688
Score = 2981 bits (1614), Expect = 0.0
Identities = 2264/2575 (88%), Gaps = 56/2575 (2%)
Strand=Plus/Plus
Query 13 AAGCTTTTCTTTTGCTTCTTGCTCTTCTTCTCCTTCCGCTTGGAAATCGGCAGAGGACAG 72
||||||||||| ||| |||||||| |||||| |||| | |||||| || ||||||||||
Sbjct 13 AAGCTTTTCTTCTGCATCTTGCTCGTCTTCTTCTTCTGTTTGGAATTCAACAGAGGACAG 72
Query 73 AACAACGGCAAAACCCAAGTCAATGTCGGTGTTGTAACAGATGTCGGTACTTCACACTCG 132
|||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||
Sbjct 73 AACAACGGCAAAACCCTAGTCGATGTCGGTGTTGTAACAGATGTCGATACTTCACACTCG 132
Query 133 GAGGTT-TCCATGCTCTGTATCAACATGTCTCTTACTGATTTCTACTCTTCTC-GTCCCC 190
||||| | ||||||||| |||||||||||| ||| ||||||||||||||| | |||||
Sbjct 133 AAGGTTGT-CATGCTCTGCATCAACATGTCTATTAGTGATTTCTACTCTTC-CAATCCCC 190
Query 191 AGTTTCAGACAAGGCTTGTCGTCAACGTTGGTGACTCCAAAAATGACGTTGTTGGTGCCG 250
||||| ||||||||||||| |||||||| ||||||||||||| ||||||||| |||||||
Sbjct 191 AGTTTGAGACAAGGCTTGTTGTCAACGTAGGTGACTCCAAAAGTGACGTTGTAGGTGCCG 250
Query 251 CAACTGCAGCTATTGAGTTGATAAAGAACAAGCAAGTGAAAGCGATTTTGGGCCCATGGA 310
| | ||||||| |||| ||||||||||||| |||||||| || |||||||| |||||||
Sbjct 251 CGATTGCAGCTCTTGACCTGATAAAGAACAAACAAGTGAAGGCTATTTTGGGGCCATGGA 310
Query 311 CATCTATGCAAGCTCATTTCTTGATCGAGATTGGCCAAAAATCTCGGGTTCCTGTTGTTT 370
|||||||||||||||| ||| ||||||||||||||||||| || ||||||||| ||||||
Sbjct 311 CATCTATGCAAGCTCACTTCCTGATCGAGATTGGCCAAAAGTCCCGGGTTCCTATTGTTT 370
Query 371 CCTATTCTGCAACAAGCCCATTTCTTACTTCCCTTCGTAG-CCGATACTTCTTGCGTGCT 429
|||||||||||||||||||| ||||||||||||||||||| || ||||||||| ||||||
Sbjct 371 CCTATTCTGCAACAAGCCCAATTCTTACTTCCCTTCGTAGTCC-ATACTTCTTACGTGCT 429
Query 430 ACGTACGAAGACT-CTTCTCAAGTGCAGGCC-ATAAAATCTATCATCAAATTGTTCGGGT 487
||||||||||||| ||| |||||| || || |||||| | ||||||||||||||||| |
Sbjct 430 ACGTACGAAGACTCCTT-TCAAGTTCA-ACCAATAAAAGCCATCATCAAATTGTTCGGAT 487
Query 488 GGAGAGAAGTTGTGCCAGTTTACATCGACAATACCTTCGGAGAAGGTATAATGCCTCGTC 547
||||||||||||||||||||||||| ||||| ||||| || |||||||||||||||||||
Sbjct 488 GGAGAGAAGTTGTGCCAGTTTACATTGACAACACCTTTGGTGAAGGTATAATGCCTCGTC 547
Query 548 TCACCGATGCATTACAAGATATTAATGTTCGGATACCTCATAGATCCGTTATCGCTCCCA 607
| |||||||| ||||||||||||||||| ||||||||| ||||||||||||||||| ||
Sbjct 548 TTACCGATGCTTTACAAGATATTAATGTCCGGATACCTTATAGATCCGTTATCGCTATCA 607
Query 608 ATGCCACGGATCAAGAAATCTCCGTAGAACTTCTTAAGATGATGAACATGCCCACAAGAG 667
||||||| ||||| ||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 608 ATGCCACTGATCATGAAATCTCCGTGGAGCTTCTTAAGATGATGAACATGCCCACAAGAG 667
Query 668 TGTTCATTATCCACATGTCCTCTTCTCTAGCCTCAAGATTCTTCATTAAAGCAAAGGAGA 727
||||| || ||||||||| || | ||| |||||||||||||||||||||||||| |||
Sbjct 668 TGTTCCTTGTCCACATGTACTATGATCTTGCCTCAAGATTCTTCATTAAAGCAAAAGAGC 727
Query 728 TTGGTTTGATGAAACCAGGATATGTCTGGATCCTTACCAATGGAGTTATCGATGGCTTAA 787
||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 728 TTGGTTTGATGGAACCAGGATATGTCTGGATCCTTACCAATGGAGTTATCGATGACTTAA 787
Query 788 GGTCGATAAATGAGACGGGTATTGAGGCTATGGAGGGGGTATTGGGTATTAAAACTTATA 847
| | |||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct 788 GTTTGATAAATGAGACGGCTGTTGAGGCTATGGAGGGGGTATTGGGTATTAAAACTTATA 847
Query 848 TTCAAAAATCCAAAGATCTAGACATGTTTAGATCACGGTGGAAG-AGGAGATTCCCACAG 906
||| ||||||| |||||| || | ||||||||| || ||| || || |||||||| |
Sbjct 848 TTCCAAAATCCCCAGATCTTGAGAAGTTTAGATCTCGATGG-AGAAGTTTATTCCCACGG 906
Query 907 ATGGAGCTGAATGTCTATGGAT-TGTGGGCTTATGATGCTACCACTGCATTGGCCATGGC 965
||||||||| ||||||||| | |||||||||||||||||||||| ||| | || | ||
Sbjct 907 GTGGAGCTGAGTGTCTATGG-TCTGTGGGCTTATGATGCTACCACCGCACTAGCGGTAGC 965
Query 966 CATTGAAGAAGCTGGAATAAATAACATGACTTTCAGT-AA-T-GTGGATACAGGGAGAAA 1022
||||||||||||||||| ||||||||||||||||||| || | |||||||||||||| ||
Sbjct 966 CATTGAAGAAGCTGGAACAAATAACATGACTTTCAGTAAAGTGGTGGATACAGGGAGGAA 1025
Query 1023 CGTTTCCGAACTTGATGCTCTTGGTTTATCTCAATTCGGTCCAAAGCTTCTCGAGACGCT 1082
||||| |||||||| ||||||||||||||||| |||||||||||||||||| | || ||
Sbjct 1026 TGTTTCTGAACTTGAAGCTCTTGGTTTATCTCAGTTCGGTCCAAAGCTTCTCCAAACACT 1085
Query 1083 CTCAAAAGTTCAATTCAGAGGACTTGCAGGAGACTTCCGTTTTGTCAGCGGGCAACTGCA 1142
|| || |||||| |||||||||||||||||||| || |||||| || |||||||||||||
Sbjct 1086 CTTAACAGTTCAGTTCAGAGGACTTGCAGGAGAGTTTCGTTTTTTCCGCGGGCAACTGCA 1145
Query 1143 ACCATCGGTGTTTGAAATTGTCAATATGGTCGGGGCCGGAGAAAGATCAATAGGATTCTG 1202
||||||||||||||| ||||||||||| || ||||||||| |||||||||||| ||
Sbjct 1146 ACCATCGGTGTTTGAGATTGTCAATATAATCAATACCGGAGAAAAATCAATAGGATTTTG 1205
Query 1203 GACA-GAGGGAAATGGTCTTGTGAAGAAACTTGACCAAG-AACCACGAAGCATAGGTACT 1260
|| | ||||||||||||||||||||||||||||| | || || || | |||||| | ||
Sbjct 1206 GA-AGGAGGGAAATGGTCTTGTGAAGAAACTTGATC-AGCAAGCAAGTAGCATAAGCGCT 1263
Query 1261 TTATCCACTTGGCAAGATCATCTTAAGCTTATAATATGGCCTGGAGAGGCTAATTCTGTT 1320
||||| |||||| ||||||||||||| | || |||||||||||||||| ||||||||
Sbjct 1264 TTATCTACTTGGAAAGATCATCTTAAACACATTGTATGGCCTGGAGAGGCGGATTCTGTT 1323
Query 1321 CCCAAAGGATGGGAGATCCCGACTAATGGGAAGAAGTTGCGCATTGGAGTTCCCAAGAG- 1379
|| ||||||||| ||||||||||||| |||||||||||||| |||||||||||||| ||
Sbjct 1324 CCGAAAGGATGGCAGATCCCGACTAAGGGGAAGAAGTTGCGTATTGGAGTTCCCAAAAGA 1383
Query 1380 ACTTGGTTTCACTGATCTCGTGAAGGTCACAAGGGATCCTATCACCAATTCAACTGTAGT 1439
|| || | ||||||||| ||||| ||||||||||||||||| |||||||||||||||||
Sbjct 1384 AC-CGGCTACACTGATCTTGTGAAAGTCACAAGGGATCCTATTACCAATTCAACTGTAGT 1442
Query 1440 CACAGGTTTCTGCATAGAtttttttGAGGCTGTGATTCAAGCAA-TGCCTTATGACGTCT 1498
||||||||| ||||||||||| |||||||||||||||| || || |||||||||||||||
Sbjct 1443 CACAGGTTTTTGCATAGATTTCTTTGAGGCTGTGATTCGAG-AACTGCCTTATGACGTCT 1501
Query 1499 CTTATGAGTTCATTCCTTTTGAAACACCTGACGGTAAACCAGCCGGTAATCACAATGACT 1558
| ||||||||||| ||||| |||| ||| ||||| ||| ||||||||||| |||| ||||
Sbjct 1502 CATATGAGTTCATACCTTTCGAAAAACCCGACGGAAAAACAGCCGGTAATTACAACGACT 1561
Query 1559 TGGTCCAGCAAGTGTACCTCGGGAGGTATGATGGGGTCGTGGGAGATACAACAATATTGG 1618
||||| | ||||||||||||||||| ||||||| ||| |||||||||||||| |||||||
Sbjct 1562 TGGTCTACCAAGTGTACCTCGGGAGATATGATGCGGTTGTGGGAGATACAACCATATTGG 1621
Query 1619 CGAACAGGTCCTCTTACGTTGACTTCAC-TCTCCCATTCATTAAATCAGGTGTTGGAATG 1677
||||||||| |||||||| |||||||| | ||||||| |||||||||||||| ||| ||
Sbjct 1622 TGAACAGGTCTTCTTACGTCGACTTCACAT-TCCCATTTATTAAATCAGGTGTCGGATTG 1680
Query 1678 ATCGTCCCAATGAGAGACGAAGTGAAA-AGAGACGA-ATTCAGCTTCTTGAAACCTTTGT 1735
||||| ||||| |||| ||| ||| |||||| | || | ||| ||||||||||||
Sbjct 1681 ATCGTTGAAATGACAGACCCAGT-AAAGAGAGACTATATAC-TTTTCATGAAACCTTTGT 1738
Query 1736 CGATCG-AACTATGGTTGACATCC-TTAGTCTTTTTCTTCCTTGTTTC-AATCT-CTGTT 1791
| || | ||||||||||||| ||| ||| ||| ||||||||||| || | | ||||
Sbjct 1739 C-ATGGAAACTATGGTTGACTTCCTTTA-TCTCTTTCTTCCTTG--TCGGTTGTACTGTA 1794
Query 1792 TGGACTCTTGAACAT-AGGGTTAATCCGGACTTCCGTGGACCGGCTA-ATTACCAAGCTA 1849
||| ||| ||| || || | |||||||||||| |||||||| ||| ||| ||||||||
Sbjct 1795 TGGGTTCTCGAATATAAGCG-TAATCCGGACTTTAGTGGACCGCCTAGATT-CCAAGCTA 1852
Query 1850 GTACCATCT-TCTGGTTTGCCTTCTCTACCATGGTTTTTGCTCCAAGAGAGAGAGTGTTT 1908
||||||||| | |||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 1853 GTACCATCTGT-TGGTTTGCCTTCTCTACCATGGTTTTTGCTCCAAGAGAAAGAGTATTT 1911
Query 1909 AGCTTCTGGGCGAGGGCCCTGGTTGTCACATGGTACTTCCTCGTTCTTGTGTTAACTCAG 1968
||||| |||||||||||||||||| || |||||||||| |||||||| |||||||| |||
Sbjct 1912 AGCTTTTGGGCGAGGGCCCTGGTTATCGCATGGTACTTTCTCGTTCTCGTGTTAACCCAG 1971
Query 1969 AGTTACACAGCCAGTTTGGCGTCGCTTTTGACATCACAGCAACTACATCCAACCATAACC 2028
||||||||||| |||||||| |||||||||||||||||| || || ||||||| ||||||
Sbjct 1972 AGTTACACAGCGAGTTTGGCATCGCTTTTGACATCACAGAAATTAAATCCAACAATAACC 2031
Query 2029 AGCATGAGTAGCTTGCTTCATAAAGGAGAAACAATCGGTTATCAGAGAACATCCTTCATC 2088
||||||||||| |||||| | |||||||||||| | ||||||||| ||||||||||||||
Sbjct 2032 AGCATGAGTAGTTTGCTTGAAAAAGGAGAAACAGTGGGTTATCAGCGAACATCCTTCATC 2091
Query 2089 CTTGGAAAGCTTAATGAAACAGGTTTCCCACAATCTAGCCTTGTGCCCTTTGATACCGCA 2148
|||||||||||||| |||| ||||||||| |||||||||||||||||||||||||| |||
Sbjct 2092 CTTGGAAAGCTTAAAGAAAGAGGTTTCCCGCAATCTAGCCTTGTGCCCTTTGATACTGCA 2151
Query 2149 GAAGAATGCGCCGAGCTTCTGAA-AAAAGGATCAAAAAAGGGTGGTATCTCTGCAGCTTT 2207
|||||||| | |||||||| || |||||| ||||||| |||||| |||||| ||||||
Sbjct 2152 GAAGAATGTGATGAGCTTCT-AAGTAAAGGACCAAAAAAAGGTGGTGTCTCTGGAGCTTT 2210
Query 2208 CTTGG---GACCTTACTTGAGACTCTTTCTTGGACAATATTGCAACACTTATAAAATGGT 2264
||||| ||||||||||||||||||||||||||| | ||||||||| || ||||||||
Sbjct 2211 CTTGGAAATACCTTACTTGAGACTCTTTCTTGGACAGTTTTGCAACACATACAAAATGGT 2270
Query 2265 TGAAGAACCCTTCAATGTTGATGGATTCGGCTTTGTTTTTCCAATCGGATCACCTCTGGT 2324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2271 TGAAGAACCCTTCAATGTTGATGGATTCGGCTTTGTTTTTCCAATCGGATCACCTCTAGT 2330
Query 2325 GGCCGATGTTTCAAGGGCCATCTTAAAAGTAGCAGAGTCTCCAAAGGCAATGGAGCTCGA 2384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2331 GGCCGATGTTTCAAGGGCCATCTTAAAAGTAGCAGAGTCTCCAAAGGCAATGGAGCTCGA 2390
Query 2385 GAACGCATGGTTCAAGAAGAAAGAACAAAGTTGTCCTGATCCAGTTACCAATCCAGATTC 2444
| |||||||||||||||||||||||||| |||||||||||| |||| ||||||||| |
Sbjct 2391 GCGTGCATGGTTCAAGAAGAAAGAACAAAGCTGTCCTGATCCAATTACTAATCCAGATCC 2450
Query 2445 AAATCCATCTGTT-ACCTCTATACAGCTCGGCGTACG-CAGTTTCTGGTTTCTGTTTCTT 2502
|||||| ||| || ||||||| ||||| | | || | |||||||| |||||||||| ||
Sbjct 2451 AAATCCCTCT-TTCACCTCTAGGCAGCTTGACATA-GACAGTTTCTTGTTTCTGTTTGTT 2508
Query 2503 GTTGTGTTTGTTGTGTGCGTTCTAGCACTCGGAAAATTCACAT-TCTGTTTCCTA 2556
| ||||| ||||||| ||| | ||||||||||| ||||||| | |||||||||
Sbjct 2509 GGCGTGTTACTTGTGTGTGTTATGGCACTCGGAAATTTCACATAT-TGTTTCCTA 2562
> AT2G24750.1 | Symbols: | pseudogene, similar to Avr9/Cf-9 rapidly
elicited protein 141, similar to GB:AAB61068; blastp match
of 43% identity and 5.0e-152 P-value to GP|30013669|gb|AAP03877.1||AY220478
Avr9/Cf-9 rapidly elicited protein 141
{Nicotiana tabacum} | chr2:10539001-10545985 FORWARD LENGTH=6985
Length=6985
Score = 1206 bits (653), Expect = 0.0
Identities = 1121/1345 (83%), Gaps = 40/1345 (3%)
Strand=Plus/Plus
Query 257 CAGCTATTGAGTTGATAAAGAACAAGCAAGTGAAAGCGATTTTGGGCCCATGGACATCTA 316
||||| || || |||||||||||||||| ||| |||||||||||| || |||||||| |
Sbjct 4003 CAGCTCTTAAGCTGATAAAGAACAAGCACGTGGTAGCGATTTTGGGGCCTTGGACATCCA 4062
Query 317 TGCAAGCTCATTTCT-TGATCGAGATTGGCCAAAAATCTCGGGTTCCTG-TTGTTTCCTA 374
||||||||||||| | |||| || ||||| |||||||||||||| || | ||||||| ||
Sbjct 4063 TGCAAGCTCATTT-TATGATTGATATTGGACAAAAATCTCGGGTGCC-GATTGTTTCTTA 4120
Query 375 TTCTGCAACAAGCCCATTTCTTACTTCCCTTCGTAG-CCGATACTTCTTGCGTGCTACGT 433
||||||||||| || ||||||||||| || || || || |||||| || |||||||| |
Sbjct 4121 CTCTGCAACAAGTCCGTTTCTTACTTCTCTACGCAGTCC-ATACTTTTTCCGTGCTACAT 4179
Query 434 ACGAAGACT-CTTCTCAAGTGCAGGCCATAAAATCTATCATCAAATTGTTCGGGTGGAGA 492
| || |||| ||| |||||| |||||||||||||||||||||| ||||| |||||||||
Sbjct 4180 ATGAGGACTCCTT-TCAAGTAAAGGCCATAAAATCTATCATCAAGTTGTTTGGGTGGAGA 4238
Query 493 GAAGTTGTGCCAGTTTACATCGACAA-TACCTTCGGAGAAGGTATAATGCCTCGTCTCAC 551
||||| |||| |||||||||||||| | | || ||||||||||| ||||| | ||| ||
Sbjct 4239 GAAGTCGTGCTTGTTTACATCGACAACT-CATTTGGAGAAGGTATTATGCCACATCTTAC 4297
Query 552 CGATGCATTACAAGATATTAATGTTCGGATACCTCAT--AGATCCGTTATCGCTCCCAAT 609
|||||||||||||| ||||| ||||| ||| |||| |||| |||||| ||| ||||
Sbjct 4298 TGATGCATTACAAGAGATTAACGTTCGAATA--TCATACAGATATGTTATCTCTCTCAAT 4355
Query 610 GCCACGGATCAAGAAATCTC-CGTAGAAC-TTCTTAAGATGATGAACATGCCCACAAGAG 667
||||| ||| | |||||||| | |||| | ||| ||||||||||| ||||||||||||||
Sbjct 4356 GCCACTGATTATGAAATCTCTC-TAGAGCTTTC-TAAGATGATGACCATGCCCACAAGAG 4413
Query 668 TGTTCATTATCCACATGTCCTCTTCTCTAGCCTCAAGATTCTTCATTAAAGCAAAGGAGA 727
| || || |||||||| |||||||||| ||||||||| |||| | |||| ||| |||
Sbjct 4414 TTTTTATCGTCCACATGCCCTCTTCTCTTGCCTCAAGAGTCTTTACTAAAATTAAGAAGA 4473
Query 728 TTGGTTTGATGAAACCAGGATATGTCTGGATCCTTACCAATGGAGTTATCGATG-GCTTA 786
||||||||||||||||||||||||| ||||||||||||| |||||| | ||||| | |||
Sbjct 4474 TTGGTTTGATGAAACCAGGATATGTTTGGATCCTTACCAGTGGAGTAACCGATGAG-TTA 4532
Query 787 AGGTCGATAAATGAGACGGGTATTGAGGCTATGGAGGGGGTATTGGGTATTAAAACTTAT 846
|| | | || ||||| ||||||||||||||||||| |||||||||||| |||||||||||
Sbjct 4533 AGTTTGGTAGATGAGGCGGGTATTGAGGCTATGGAAGGGGTATTGGGTGTTAAAACTTAT 4592
Query 847 ATTCAAAAATCCAAA-GATCTAGACATGTTTAGATCACGGTGGAAG-AGGAGATTCCCAC 904
|||| |||| |||| || || || | ||||||| | | |||| | || || ||||||
Sbjct 4593 ATTCGGAAAT-CAAATGACCTCGAAAAGTTTAGAGCTTGTTGGAGGAAGAAG-TTCCCAG 4650
Query 905 AGATGGAGCTGAATGTCTATGGATTGTGGGCTTATGATGCTACCA-CTGCATTGGCCATG 963
|||||| ||||||||||||||||||||||||||||||||||||| | |||||||| ||
Sbjct 4651 GGATGGACCTGAATGTCTATGGATTGTGGGCTTATGATGCTACCATC-GCATTGGCAATA 4709
Query 964 GCCATTGAAGAAGCTGGAATAAATAACATGACTTTCAGTAATGTGGA-TACAGGGAGAAA 1022
|| |||||||||||||||| | ||||||||||||| ||||||||||| | ||| ||||
Sbjct 4710 GCTATTGAAGAAGCTGGAACAGATAACATGACTTTTAGTAATGTGGAGTTCAGAAAGAAT 4769
Query 1023 CGTTTCCGAACTTGATGCTCTTGGTTTATCTCAATTCGGTCCAA-AGCTTCTCGAGACGC 1081
|| || |||||||| ||||||||||| ||||||| |||||||| | |||| | |||| |
Sbjct 4770 -GTGTCTGAACTTGAAGCTCTTGGTTTTTCTCAATACGGTCCAAGA-CTTCGCAAGACAC 4827
Query 1082 TCTCAAAAGTTCAATTCAGAGGACTTGCAGGAGACTTCCGTTTTGTCAGCGGG-CAACTG 1140
|| ||| ||||| || | ||||||||||||||| |||||||||||| | || |||||
Sbjct 4828 TCACAACAGTTCGGTTGAAAGGACTTGCAGGAGATTTCCGTTTTGTC-GAAGGACAACTA 4886
Query 1141 CAACCATCGGTGTTTGAAATTGTCAATATGGTCGGGGCCGGAGAAAGATCAATAGGATTC 1200
||||||| ||||||||| || || ||| || | || || ||||||| |||||||||||
Sbjct 4887 CAACCATGGGTGTTTGAGATAGTTAATGTGATTGGAACCAGAGAAAGGTCAATAGGATTT 4946
Query 1201 TGGACAGAGGGAAATGGTCTTGTGAAGAAACTT-GACCAAGAACCACGAAGCATAGGTAC 1259
||||| || | ||||||||||||||||||| || |||||||| || | || || ||| |
Sbjct 4947 TGGACGGAAGAAAATGGTCTTGTGAAGAAA-TTAGACCAAGAGCCGCAAAACACGGGTGC 5005
Query 1260 TTTATCCACTTGGCAAGATCATCTTAAGCTTATAATATGGCCTGGAGAGGCTAATTCTGT 1319
|||||||||||||||||||||||||||| ||||||||||| ||||||||||| | |||
Sbjct 5006 GTTATCCACTTGGCAAGATCATCTTAAGCAGATAATATGGCCCGGAGAGGCTAACTATGT 5065
Query 1320 TCCCAAAGGATGGGAGATCCCGACTAATGGGAAGAAGTTGCGCATTGGAGTTCCCAAGAG 1379
||||||||||||||||||||| || || ||||||| |||||||||||||||||| || ||
Sbjct 5066 TCCCAAAGGATGGGAGATCCCAACGAACGGGAAGAGGTTGCGCATTGGAGTTCCAAAAAG 5125
Query 1380 A-CTTGGTTTCACTGATCTCGTGAAGGTCACAAGGGATCCTATCACCAATTCA-ACTGTA 1437
| || |||| ||| ||||| ||| ||||||| | |||||||| ||| |||||| | | |
Sbjct 5126 AACT-GGTTACACCGATCTTGTGGAGGTCACCATGGATCCTACCACGAATTCACAA-GAA 5183
Query 1438 GTCACAGGTTTCTGCATAGAtttttttGAGGCTGTGATTCAAGCAATGCCTTATGACGTC 1497
|||| |||||| ||||||| ||| ||||| |||||||| ||| ||||||||||||| ||
Sbjct 5184 GTCAAAGGTTTTTGCATAGCTTTCTTTGAAGCTGTGATCCAAAAAATGCCTTATGACATC 5243
Query 1498 TCTTATGAGTTCATTCCTTTTGAAACACCTGACGGTAAACCAGCCGGTAATCACAATGA- 1556
|| ||||| ||| |||||||||||||| | ||||||||||||||||| |||||||| ||
Sbjct 5244 TCCTATGATTTCTTTCCTTTTGAAACATCGGACGGTAAACCAGCCGGAAATCACAACGAT 5303
Query 1557 CTTGGTCCAGCAAGTGTACCTCGGG 1581
|| || | ||||| ||||| |||
Sbjct 5304 CTAA-TCTACCAAGTTTACCTTGGG 5327
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 134848742784
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5