BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg320330 Length=240 Score E Sequences producing significant alignments: (Bits) Value AT2G25295.1 | Symbols: LCR81 | low-molecular-weight cysteine-ri... 300 4e-81 > AT2G25295.1 | Symbols: LCR81 | low-molecular-weight cysteine-rich 81 | chr2:10769933-10770421 FORWARD LENGTH=240 Length=240 Score = 300 bits (162), Expect = 4e-81 Identities = 204/224 (91%), Gaps = 3/224 (1%) Strand=Plus/Plus Query 1 ATGGATGTTCGAAGATCTCCATACATTTTCATTGCAGTTTCTTTCATTGCAATGTTCTTG 60 |||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||||||||| Sbjct 1 ATGGATGTTCAAAGATCTTCATACATTTTCATTGCACTTTCTATCATTGCAATGTTCTTG 60 Query 61 ACCACAGGAGTAAGATCACAGCCGGTAAGAGATATTTGCCCAGGGGTATGCCATGCTGGA 120 | ||||||||||| | | ||| ||||||||||||||| ||||| || |||||||||||| Sbjct 61 ATCACAGGAGTAA-AAC-CAG-AGGTAAGAGATATTTGTCCAGGAGTGTGCCATGCTGGA 117 Query 121 ATTGAACCAGACTGCGACACACTCTGCACTAGCTTAGGCTTTACTGGAGGCTATTGTCAA 180 |||||||||||||| ||||||||||||| |||| | || |||||||| || ||||||||| Sbjct 118 ATTGAACCAGACTGTGACACACTCTGCATTAGCATGGGGTTTACTGGGGGTTATTGTCAA 177 Query 181 GGATTAACATGTTGTTGCAACCCAAAATCCTCCAAATCCTCAAT 224 |||||||||||||||||||||||||||||||||||||||||||| Sbjct 178 GGATTAACATGTTGTTGCAACCCAAAATCCTCCAAATCCTCAAT 221 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 10857833784 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5