BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg320379 Length=867 Score E Sequences producing significant alignments: (Bits) Value AT2G25880.1 | Symbols: AtAUR2, AUR2 | ataurora2 | chr2:11034652... 1358 0.0 AT4G32830.1 | Symbols: AtAUR1, AUR1 | ataurora1 | chr4:15842453... 833 0.0 > AT2G25880.1 | Symbols: AtAUR2, AUR2 | ataurora2 | chr2:11034652-11036910 REVERSE LENGTH=1185 Length=1185 Score = 1358 bits (735), Expect = 0.0 Identities = 826/870 (95%), Gaps = 6/870 (1%) Strand=Plus/Plus Query 1 ATGGGGATTTCTACAGAGACGCAGCAAAACGCGGTTTCAGAGGCTGCACAAAAGAGATGG 60 |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| Sbjct 84 ATGGGGATTTCTACAGAGACGCAGCAAATTGCGGCTTCAGAGGCTGCACAAAAGAGATGG 143 Query 61 ACTACAAGCGATTTCGACATTGGAAAGCCTCTTGGTAGAGGGAAGTTTGGCCATGTTTAT 120 ||||||||||||||||| || |||||||| ||||||||||| |||||||||||||||||| Sbjct 144 ACTACAAGCGATTTCGATATCGGAAAGCCACTTGGTAGAGGAAAGTTTGGCCATGTTTAT 203 Query 121 CTAGCAAGAGAGAAACGGAGCAATCACATTGTGGCTCTT-AAGGTTCTTTTTAAGACTCA 179 ||||||||||||||||||||| |||||||||||||| || ||||||||||||||| |||| Sbjct 204 CTAGCAAGAGAGAAACGGAGCGATCACATTGTGGCT-TTAAAGGTTCTTTTTAAGGCTCA 262 Query 180 GCTTCAACAATCTCAAGTTGAACACCAGCTT-CGGCGGGAAGTAGAAATTCAATCTCATC 238 |||||||||||||||||||||||||||| || || |||||||||| ||||||||||||| Sbjct 263 GCTTCAACAATCTCAAGTTGAACACCAG-TTACGAAGGGAAGTAGAGATTCAATCTCATC 321 Query 239 TTCGGCATCCCAATATTCTGCGACTCTACGGTTACTTTTATGATCAGAAAAGAGTTTATT 298 |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct 322 TTCGGCATCCCAATATTCTGCGGCTCTACGGTTACTTCTATGATCAGAAAAGAGTTTATT 381 Query 299 TGATTTTAGAGTATGCAGCT-AGAGGTGAGCTTTATAAAGAGCTTCAGAAGTGCAAGTAC 357 ||||||| |||||||| | | || |||||||||||||||||||||||||||||||||||| Sbjct 382 TGATTTTGGAGTATGCTG-TAAGGGGTGAGCTTTATAAAGAGCTTCAGAAGTGCAAGTAC 440 Query 358 TTCAGCGAACGTCGAGCAGCAACTTATGTTGCGTCATTGGCAAGAGCCCTCATCTATTGC 417 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 441 TTCAGCGAACGTCGAGCAGCAACTTATGTTGCGTCATTGGCTAGAGCCCTCATCTATTGC 500 Query 418 CATGGAAAGCATGTAATTCACAGAGATATAAAGCCTGAAAATCTATTGATTGGTGCTCAG 477 |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct 501 CATGGAAAGCATGTAATTCACAGAGATATAAAACCTGAAAATCTGTTGATTGGTGCTCAG 560 Query 478 GGTGAGCTCAAGATTGCAGACTTTGGATGGTCAGTACACACATTCAACCGCAGAAGGACT 537 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 561 GGTGAGCTCAAGATTGCAGATTTTGGATGGTCAGTACACACATTCAACCGTAGAAGGACT 620 Query 538 ATGTGTGGCACTTTGGATTACCTTCCGCCTGAGATGGTGGAAAGCGTAGAACACGATGCA 597 |||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||| Sbjct 621 ATGTGTGGCACTTTGGATTACCTTCCACCTGAGATGGTGGAAAGCGTTGAACATGATGCG 680 Query 598 AGTGTCGATATATGGAGTCTAGGAATTCTCTGCTACGAATTTCTTTATGGTGTCCCTCCT 657 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 681 AGTGTCGATATATGGAGTCTAGGAATTCTCTGCTACGAATTTCTTTATGGTGTTCCTCCT 740 Query 658 TTTGAGGCCAGGGAACATTCAGAGACATACAAAAGGATTGTTCAAGTGGATCTCAAGTTC 717 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 741 TTTGAGGCCAGGGAGCATTCAGAGACATACAAAAGGATTGTTCAAGTGGATCTCAAGTTC 800 Query 718 CCTCCCAAACCCATTGTCTCTTCATATGCAAAGGACCTGATTAGCCAGATGCTGGTTAAG 777 ||||||||||||||||| || |||| ||||||||||||||||||||||||| |||||||| Sbjct 801 CCTCCCAAACCCATTGTGTCATCATCTGCAAAGGACCTGATTAGCCAGATGTTGGTTAAG 860 Query 778 GAGTCTACACGACGTTTGCCCTTGCACAAGCTTCTTGAACACCCATGGATTGTGCAAAAC 837 |||||||| | ||||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct 861 GAGTCTACGCAACGTTTGGCCTTGCACAAGCTTCTTGAACACCCGTGGATTGTGCAAAAC 920 Query 838 GCAGACCCATCAGGCCTCTACAGAGGTTGA 867 ||||||||||||||||| |||||||| ||| Sbjct 921 GCAGACCCATCAGGCCTTTACAGAGGATGA 950 > AT4G32830.1 | Symbols: AtAUR1, AUR1 | ataurora1 | chr4:15842453-15844536 FORWARD LENGTH=1171 Length=1171 Score = 833 bits (451), Expect = 0.0 Identities = 702/825 (85%), Gaps = 10/825 (1%) Strand=Plus/Plus Query 43 GCTGCACAAAAGAGATGGACTACAAGCGATTTCGACATTGGAAAGCCTCTTGGTAGAGGG 102 ||||||||||||||||||||| ||||||||||||||| || ||||||||||| ||||| Sbjct 165 GCTGCACAAAAGAGATGGACTTTAAGCGATTTCGACATCGGTAAGCCTCTTGGCAGAGGC 224 Query 103 AAGTTTGGCCATGTTTATCTAGCAAGAGAGAAACGGAGCAATCACATTGTGGCTCTTAAG 162 || || || || || ||||| || ||||| ||||||||||||||| |||| ||||| ||| Sbjct 225 AAATTCGGTCACGTCTATCTCGCCAGAGAAAAACGGAGCAATCACGTTGTCGCTCTAAAG 284 Query 163 GTTCTTTTTAAGA-CTCAGCTTCAACAATCTCAAGTTGAACACCAGCTTC-GGCGGGAAG 220 |||||||| |||| | |||||||||||||| ||||||||||| |||| || | | |||| Sbjct 285 GTTCTTTTCAAGAGC-CAGCTTCAACAATCCCAAGTTGAACATCAGC-TCAGAAGAGAAG 342 Query 221 TAGAAATTCAATCTCATCTTCGGCATCCCAATATTCTGCGACTCTACGGTTACTTT-TAT 279 | || ||||| ||||||||||| || ||||| || || || || || || || ||| ||| Sbjct 343 TTGAGATTCAGTCTCATCTTCGTCACCCCAACATACTCCGGCTTTATGGCTA-TTTCTAT 401 Query 280 GATCAGAAAAGAGTTTATTTGAT-TTTAGAGTATGCAGCTAGAGGTGAGCTTTATAAAGA 338 ||||| ||||||||||||||||| || |||||||| |||||||| || ||||| || || Sbjct 402 GATCAAAAAAGAGTTTATTTGATACTT-GAGTATGCTGCTAGAGGCGAACTTTACAAGGA 460 Query 339 GCTTCAGAAGTGCAAGTACTTCAGCGAACGTCGAGCAGCAACTTATGTTGCGTCATTGGC 398 |||||||| ||||| |||||||||||| | ||||| || ||||||||||| |||||||| Sbjct 461 TCTTCAGAAATGCAAATACTTCAGCGAAAGACGAGCTGCTACTTATGTTGCCTCATTGGC 520 Query 399 AAGAGCCCTCATCTATTGCCATGGAAAGCATGTAATTCACAGAGATA-TAAAGCCTGAAA 457 || || ||||||||||||||||| |||||||| || |||||||||| |||| || || | Sbjct 521 GAGGGCTCTCATCTATTGCCATGGCAAGCATGTGATACACAGAGATATTAAA-CCAGAGA 579 Query 458 ATCTATTGATTGGTGCTCAGGGTGAGCTCAAGATTGCAGACTTTGGATGGTCAGTACACA 517 |||| | |||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct 580 ATCTGCTAATTGGTGCTCAGGGTGAGCTCAAGATTGCAGACTTTGGTTGGTCGGTACACA 639 Query 518 CATTCAACCGCAGAAGGACTATGTGTGGCACTTTGGATTACCTTCCGCCTGAGATGGTGG 577 |||| ||||| |||||||| ||||||||||| | ||||||||||| ||||||||||| | Sbjct 640 CATTTAACCGAAGAAGGACCATGTGTGGCACACTAGATTACCTTCCTCCTGAGATGGTCG 699 Query 578 AAAGCGTAGAACACGATGCAAGTGTCGATATATGGAGTCTAGGAATTCTCTGCTACGAAT 637 ||||||||||||| ||||| ||||| ||||| ||||| || || |||||||| ||||| | Sbjct 700 AAAGCGTAGAACATGATGCTAGTGTAGATATCTGGAGCCTTGGGATTCTCTGTTACGAGT 759 Query 638 TTCTTTATGGTGTCCCTCCTTTTGAGGCCAGGGAACATTCAGAGACATACAAAAGGATTG 697 ||||||||||||| ||||||||||| |||| ||| || ||||| ||||||| |||||||| Sbjct 760 TTCTTTATGGTGTACCTCCTTTTGAAGCCATGGAGCACTCAGACACATACAGAAGGATTG 819 Query 698 TTCAAGTGGATCTCAAGTTCCCTCCCAAACCCATTGTCTCTTCATATGCAAAGGACCTGA 757 | ||||||||||||||||||||||||||||| || ||||| ||| ||||||||| || | Sbjct 820 TGCAAGTGGATCTCAAGTTCCCTCCCAAACCAATAATCTCTGCATCTGCAAAGGATCTTA 879 Query 758 TTAGCCAGATGCTGGTTAAGGAGTCTACACGACGTTTGCCCTTGCACAAGCTTCTTGAAC 817 ||||||||||||| || ||||||||| | | |||| |||| |||||||||||||| || | Sbjct 880 TTAGCCAGATGCTTGTCAAGGAGTCTTCGCAACGTCTGCCATTGCACAAGCTTCTGGAGC 939 Query 818 ACCCATGGATTGTGCAAAACGCAGACCCATCAGGCCTCTACAGAG 862 | || ||||| ||||||||||| || || || || ||||||||| Sbjct 940 ATCCGTGGATCGTGCAAAACGCTGATCCTTCTGGAATCTACAGAG 984 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 42297151774 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5