BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg320434
Length=1860
Score E
Sequences producing significant alignments: (Bits) Value
AT2G26450.1 | Symbols: | Plant invertase/pectin methylesterase... 2612 0.0
AT4G33230.1 | Symbols: | Plant invertase/pectin methylesterase... 885 0.0
> AT2G26450.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily | chr2:11251120-11253612 FORWARD LENGTH=2170
Length=2170
Score = 2612 bits (1414), Expect = 0.0
Identities = 1730/1876 (92%), Gaps = 47/1876 (3%)
Strand=Plus/Plus
Query 1 ATGGCGTTTCAGGATTTCGACAAGATCCAAGAACGTGTAAACGCCAATAGGAAACGTAAA 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 160 ATGGCGTTTCAGGATTTTGACAAGATCCAAGAACGTGTAAACGCCAATAGGAAACGTAAA 219
Query 61 TTCAGGAAGAGGATCATCGTTGGAACGGTCTCTTTGCTTGTGGTTGTTGCTGCCATTGTT 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 220 TTCAGGAAGAGGATCATCGTTGGAACGGTCTCTTTGCTTGTGGTTGTTGCTGCCATTGTT 279
Query 121 GGAGGAGCTTTTGCTTATGTTGCTTATGAGAAAAGAAATG------------AACAACAA 168
|||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 280 GGAGGAGCTTTTGCTTATGTTGCTTATGAGAAAAGAAATGAACAACAACAACAACAACAA 339
Query 169 CAAGCGAAGAGCCACAACAAAAGCGGTAGCGGCAACAACGTCAAGGATAGCGACAAGAAG 228
||||| |||| ||||||||||||||||||||||||||||||| | | | |||
Sbjct 340 CAAGCAAAGAACCACAACAAAAGCGGTAGCGGCAACAACGTC---G-T-----C---AAG 387
Query 229 AGCCAGAGCCCACCAAGCCAGAGCCCATCAAGTAAGAGCCCACCAAGCACGAGCCAAAAA 288
| | || | | |||| |||| || | ||||||||||| | |||||||||||
Sbjct 388 -G--ATAG-CGA-CAAG-AAGAG-CC--C------GAGCCCACCAACCCCGAGCCAAAAA 432
Query 289 GCTCCAGTTTCCGCAGCTCAGTCAGCAAAACCTGGTCAGGGTGACAAGATTATCCAAACA 348
|| || ||||||||||| ||||||| ||||| ||||||||||| ||||||||||||||
Sbjct 433 GCGCCCGTTTCCGCAGCGCAGTCAGTGAAACCCGGTCAGGGTGATAAGATTATCCAAACT 492
Query 349 ATCTGCGGTTCAACGCTTTACAAGCGAGCCTGCGAGGAAACGCTCAAAAACAGAACAGAG 408
||||| ||||||||||||||| || | ||||||| ||||||||||||||||||||||
Sbjct 493 CTCTGCAGTTCAACGCTTTACATGCAAATCTGCGAGAAAACGCTCAAAAACAGAACAGAC 552
Query 409 AAGGGTTTTGCTTTGGCCAATCCGACGAGCTTTTTGAAGTCTGCCATTGAAGCTGTCAAT 468
|||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 553 AAGGGTTTTGCTTTGGACAATCCGACGACCTTTTTGAAGTCTGCCATTGAAGCTGTCAAT 612
Query 469 GAAGATCTTGACCGAGTTTTAGAGAAGGTCTTGAGTCTCAAGACTGAAAACCAGGATGAT 528
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 613 GAAGATCTTGACCTTGTTTTAGAGAAGGTCTTGAGTCTCAAGACTGAAAACCAGGATGAT 672
Query 529 AGAGATGCGATTGCA-CAATGTAAGTTGCTTGTGGAAGACGCAAAGGAGGAAACCGCCGC 587
| ||||||||| | | ||||||||||||||||| |||||||||||||||||||||| |||
Sbjct 673 AAAGATGCGATCG-AGCAATGTAAGTTGCTTGTCGAAGACGCAAAGGAGGAAACCGTCGC 731
Query 588 ATCGCTGAACAAAATCAACGGT-ACAGAAGTCAATAGCTTCGCAAAGGTAGTTCCTGACC 646
|||||||||||||||||| || ||||||||||| ||||||| ||| |||||||||||||
Sbjct 732 GTCGCTGAACAAAATCAAC-GTCACAGAAGTCAACAGCTTCGAAAAAGTAGTTCCTGACC 790
Query 647 TGGAAAGTTGGCTAAGCGCGGTCATGTCTTACCAGGAGACATGCCTTGACGGGTTTGAAG 706
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 791 TGGAAAGTTGGCTAAGCGCGGTCATGTCTTATCAGGAGACATGCCTTGACGGGTTTGAAG 850
Query 707 AAGGGACCTTAAAATCTGAAGTGAAGAAGAGCGTCAATTCTTCACAGGTTCTGACGAGCA 766
|||||| |||||||||||||||||||| ||||||||||||||| || |||||||| ||||
Sbjct 851 AAGGGAACTTAAAATCTGAAGTGAAGACGAGCGTCAATTCTTCTCAAGTTCTGACCAGCA 910
Query 767 ATTCCCTTGCGATGATCACATCCTTTGA-CGTGAATCTCTCTCCAGTTATGAAGGTCGCA 825
||||||| ||| |||||| | | ||| | || |||||||||||| || |||||||||| |
Sbjct 911 ATTCCCTCGCGTTGATCAAAACATTT-ACCGAGAATCTCTCTCCGGTAATGAAGGTCGTA 969
Query 826 -ACACGACATCTTCTTGATGATATTCCGTCTTGGGTAAGCAACGAGGATCGAAGAATGTT 884
| |||||||||||||||||| || |||||||||||||||||||| ||| ||||||||||
Sbjct 970 GA-ACGACATCTTCTTGATGACATCCCGTCTTGGGTAAGCAACGATGATAGAAGAATGTT 1028
Query 885 AAGGGCTGTTGATGTGAAGGCTTTGAAGCCTAATGCCACTGTAGCTAAAGATGGCAGTGG 944
|||||||||||||||||||||||||||||| || || ||||| || ||||||||||||||
Sbjct 1029 AAGGGCTGTTGATGTGAAGGCTTTGAAGCCAAACGCAACTGTGGCCAAAGATGGCAGTGG 1088
Query 945 AAATTTCACGACCATTAATGATGCTCTGAGAGCAATGCCTGAGAAATATGAGGGAAGGTA 1004
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1089 GGATTTCACAACCATTAATGATGCGCTGAGAGCAATGCCTGAGAAATATGAGGGAAGGTA 1148
Query 1005 CATTATCTACGTCAAACAAGGCATTTATGACGAATCTGTGACTGTCGATAAGAAGAAGGC 1064
||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||
Sbjct 1149 CATTATCTACGTCAAACAAGGCATTTATGACGAATATGTGACCGTTGATAAGAAGAAGGC 1208
Query 1065 GAATCTCACTATGGTCGGAGATGGATCACAAAAGACAATTGTGACCGGAAACAAAAGCCA 1124
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 1209 GAATCTCACTATGGTCGGAGATGGATCACAGAAGACAATTGTGACCGGTAACAAAAGCCA 1268
Query 1125 CGCAAAGAAAATCCGCACTTTTCTCACGGCAACGTTCGTTGCACAGGGAGAAGGGTTTAT 1184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1269 TGCAAAGAAAATCCGCACTTTTCTCACGGCAACGTTCGTTGCACAGGGAGAAGGGTTCAT 1328
Query 1185 GGCACAGTCAATGGGGTTCCGGAACACGGCTGGGCCAGAAGGACATCAAGCAGTTGCAAT 1244
||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 1329 GGCACAGTCAATGGGGTTCCGGAACACGGCTGGGCCAGAGGGACATCAAGCAGTCGCAAT 1388
Query 1245 ACGTGTCCAATCCGATAGATCAATTTTCCTAAACTGCCGATTTGAAGGATACCAAGACAC 1304
|||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 1389 ACGTGTCCAATCCGATCGATCAATTTTCCTCAACTGCCGATTTGAAGGTTACCAAGACAC 1448
Query 1305 ATTGTACGCTTACACACACCGTCAGTACTACAGAAGCTGTGTGATAGTCGGTACAATCGA 1364
|||||| |||||||| |||||||| ||||||||||| ||||||||||| || ||||||||
Sbjct 1449 ATTGTATGCTTACACGCACCGTCAATACTACAGAAGTTGTGTGATAGTTGGAACAATCGA 1508
Query 1365 CTTCATATTCGGAGATGCGGCTGCCATCTTCCAGAACTGTAACATCTTCATCCGAAAAGG 1424
|||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||
Sbjct 1509 CTTCATATTCGGAGATGCAGCCGCCATCTTCCAGAACTGTAACATCTTCATCAGAAAAGG 1568
Query 1425 CTTACCAGGACAAAAGAACACCGTGACCGCTCAAGGACGTGTTGACAAGTTTCAGACGAC 1484
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct 1569 CTTACCAGGACAAAAGAACACGGTGACCGCTCAAGGTCGTGTTGACAAGTTTCAGACGAC 1628
Query 1485 TGGTTTCGTGGTCCATAATTGTAAAATCGCTGCAAATGAAGACCTTAAGCCAGTAAAGGA 1544
||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 TGGTTTCGTAGTACACAATTGTAAAATCGCTGCAAATGAAGACCTTAAGCCAGTAAAGGA 1688
Query 1545 AGAGTACAAGAGCTACCTCGGGAGACCGTGGAAGAACTACTCTCGAACGATCATAATGGA 1604
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1689 AGAGTACAAGAGCTACCTCGGGCGACCGTGGAAGAACTACTCTCGAACGATCATAATGGA 1748
Query 1605 ATCTAAAATCGAGAATGTGATTGACCCTGTTGGATGGTTGAGATGGCAAGAGACGGATTT 1664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1749 ATCTAAAATCGAGAATGTGATTGACCCTGTTGGATGGTTGAGATGGCAAGAGACGGATTT 1808
Query 1665 TGCGATAGACACACTCTACTACGCGGAGTACAATAACAAAGGATCAAGTGGAGATACAAC 1724
||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1809 CGCGATAGACACGTTGTACTACGCGGAGTACAATAACAAAGGATCAAGTGGAGATACAAC 1868
Query 1725 TTCAAGAGTTAAATGGCCTGGATTTAAGGTCATAAACAAGGAGGAGGCTTTGAACTTTAC 1784
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1869 TTCAAGAGTTAAATGGCCTGGATTTAAGGTCATAAACAAGGAGGAGGCTTTGAACTATAC 1928
Query 1785 AGTTGGGCCCTTCTTACAAGGAGATTGGATCAGTGCCTCAGGTTCTCCCGTTAAGTTGGG 1844
||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1929 TGTTGGACCCTTCTTACAAGGAGATTGGATCAGTGCCTCAGGCTCTCCCGTTAAGTTGGG 1988
Query 1845 TCTTTATGATGCTTGA 1860
||||||||||||||||
Sbjct 1989 TCTTTATGATGCTTGA 2004
> AT4G33230.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily | chr4:16026591-16028754 REVERSE LENGTH=1830
Length=1830
Score = 885 bits (479), Expect = 0.0
Identities = 1238/1597 (78%), Gaps = 81/1597 (5%)
Strand=Plus/Plus
Query 316 AAACCTGGTCAGGGT-GACAAGATTATCCAAACAATCTGCGGTTCAACGCTTTACAAGCG 374
||| |||| || ||| || ||||||||||||||| | ||| ||| || || ||||| |
Sbjct 259 AAAGCTGGCCA-GGTCGATAAGATTATCCAAACACTTTGCAATTCTACTCTCTACAAACC 317
Query 375 AGCCTGCGAGGAA-ACGCTCAAAAACAGA-ACAGAGAAGGGTTTTGCTTTGGCCAATCCG 432
| | ||| | ||| || || ||||| || ||| |||| | | | || | ||||
Sbjct 318 AACTTGCCA-GAATACTCTTAAAAA-TGAGACAAAGAAAGATACTCCTCAAACTGATCCT 375
Query 433 ACGAGCTTTTTGAAGTCTGCCATTGAAGCTGTCAATGAAGATCTTGACCGAGT-TTTAGA 491
| |||| | || || |||||||||| |||||||||||| ||||| |||| ||| || | |
Sbjct 376 AGGAGCCTGTTAAAATCTGCCATTGTAGCTGTCAATGACGATCTAGACCAAGTATTCA-A 434
Query 492 GAA-GGTCTTGAGTCTCAAGACTGAAAACCAGGATGATAGAGATGCGATTGCACAATGTA 550
|| ||| ||||| || || || || ||| | ||||| | ||| || || || || ||||
Sbjct 435 -AAGGGTTTTGAGCCTGAAAACAGAGAACAAAGATGACAAAGACGCTATAGCCCAGTGTA 493
Query 551 AGTTGCTTGTGGAAGACGC-AAAGGAGGAAAC-CGCCGCATCGC-TGAACAA-AATCAAC 606
||||||||||||| || || ||| || | ||| | | | || | |||| || |||||||
Sbjct 494 AGTTGCTTGTGGATGAAGCTAAA-GAAG-AACTTGGCACCTC-CATGAA-AAGAATCAAC 549
Query 607 G-GTACAGAAGTCAATAGCTTCGCAAAGGTAGTTCCTGACCTGGAAAGTTGGCTAAGCGC 665
| | |||| || |||| ||| ||||| ||||||| || |||| ||||||||||||||
Sbjct 550 GACT-CAGAGGTTAATAACTTTGCAAAAATAGTTCCCGATTTGGACAGTTGGCTAAGCGC 608
Query 666 GGTCATGTCTTACCAGGAGACATGCCTTGACGGGTTTGAAGAAGGG-ACCTTAAAATCTG 724
||||||||||| || || ||||| | || || |||||||||||| | || |||| | |
Sbjct 609 AGTCATGTCTTATCAAGAAACATGTGTCGATGGATTTGAAGAAGGGAAACTCAAAA-C-G 666
Query 725 AAG-TGAAG-AAGAGCGTCAATTCTTCACAGGTTCTGACGAGCAATTCCCTTGCGATGAT 782
|| | | | |||| |||||||||| || ||| |||| |||||||| || ||||||||
Sbjct 667 GAGAT-ACGTAAGAATTTCAATTCTTCTCAAGTTTTGACAAGCAATTCACTCGCGATGAT 725
Query 783 CACATCCTTT-GACGTGA-ATC--T-CTC---TCC--A-GTTATGAA-G-G---TC-GC- 824
| || |||| |||| || ||| | ||| ||| | |||| || | | || |
Sbjct 726 AAAAT-CTTTAGACG-GATATCTTTCCTCGGTTCCAAAGGTTA-AAACGCGACTTCTTCT 782
Query 825 --AA-CACGA-CATCTTCT--------TGATGATATTCCGTCTTGGGTAAGCAACGAGGA 872
|| || || | ||| || ||| ||||| |||| ||| ||||||| ||||
Sbjct 783 TGAAGCAAGATCTTCTGCTAAAGAGACAGATCATATTACGTCGTGGCTAAGCAATAAGGA 842
Query 873 TCGAAGAATGTTAAGGGCTGTTGATGTGAAGGCTTTGAAGCCTAATGCCACTGTAGCTAA 932
|| ||||||||| |||||||||||||| || ||||| |||||||| || || |||||
Sbjct 843 AAGACGAATGTTAAAAGCTGTTGATGTGAAAGCATTGAAACCTAATGCTACAGTGGCTAA 902
Query 933 AGATGGCAGTGGAAATTTCACGACCATTAATGATGCTCTGAGAGCAATGCCTGAGAAATA 992
|||||||||||||||||| || ||||| || | ||| || | ||||||||||| || ||
Sbjct 903 AGATGGCAGTGGAAATTTTACTACCATCAACGCTGCACTTAAAGCAATGCCTGCCAAGTA 962
Query 993 TGAGGGAAGGTACATTATCTACGTCAAACAAGGCATTTATGACGAATCTGTGACTGTCGA 1052
| |||||||||| ||||| ||||||| || |||||||| |||||||||| | | ||
Sbjct 963 CCAAGGAAGGTACACCATCTATATCAAACATGGAATTTATGATGAATCTGTGATTATTGA 1022
Query 1053 TAAGAAGAAGGCGAATCTCACTATGGTCGGAGATGGATCACAAAAGACAATTGTGACCGG 1112
||||||||| | ||| | || |||||||| ||||||||||| ||||| || ||||| ||
Sbjct 1023 TAAGAAGAAACCTAATGTTACAATGGTCGGTGATGGATCACAGAAGACGATCGTGACGGG 1082
Query 1113 AAACAAAAGCCACGCAAAGAAAATCCGCACTTTTCTCACGGCAACGTTCGTTGCACAGGG 1172
|||||||||||||||||||||||| || || || || || ||||| || || ||||| ||
Sbjct 1083 AAACAAAAGCCACGCAAAGAAAATTCGAACGTTCCTAACAGCAACATTTGTGGCACAAGG 1142
Query 1173 AGAAGGGTTTATGGCACAGTCAATGGGGTTCCGGAACACGGCTGGGCCAGAAGGACATCA 1232
|||||| || |||||||| || |||||||| |||||||| ||||||||||| ||||| ||
Sbjct 1143 AGAAGGATTCATGGCACAATCCATGGGGTTTCGGAACACTGCTGGGCCAGAGGGACACCA 1202
Query 1233 AGCAGTTGCAATACGTGTCCAATCCGATAGATCAATTTTCCTAAACTGCCGATTTGAAGG 1292
||| || |||||||||||||||||||| |||| ||||||| ||||| |||||||||||
Sbjct 1203 AGCGGTCGCAATACGTGTCCAATCCGACCGATCTGTTTTCCTTAACTGTCGATTTGAAGG 1262
Query 1293 ATACCAAGACACATTGTACGCTTACACACACCGTCAGTACTACAGAAGCTGTGTGA-TAG 1351
||||||||||| || ||||| ||||| ||||| || || |||||||| ||||| | ||
Sbjct 1263 CTACCAAGACACGTTATACGCATACACTCACCGCCAATATTACAGAAGTTGTGTCATTA- 1321
Query 1352 TCGGTACAATCGACTTCATATTCGGAGATGCGGCTGCCATCTTCCAGAACTGTAACATCT 1411
|||| ||| | || ||||| ||||| |||||||| || || |||||||||||| ||||||
Sbjct 1322 TCGGGACAGTTGATTTCATCTTCGGTGATGCGGCCGCGATTTTCCAGAACTGTGACATCT 1381
Query 1412 TCATCCGAAAAGGCTTACCAGGACAAAAGAACACCGTGACCGCTCAAGGACGTGTTGACA 1471
| ||| ||||||| ||||| || || |||||||| ||||| ||||||||||| || || |
Sbjct 1382 TTATCAGAAAAGGTTTACCGGGGCAGAAGAACACGGTGACGGCTCAAGGACGAGTGGATA 1441
Query 1472 AGTTTCAGACGACTGG-TTTCGTGGTCCATAATTGTAAAATCGCTGCAAATGAAGACCTT 1530
||||||||||||| || ||| ||| |||| || |||| | | ||| |||| ||||| |||
Sbjct 1442 AGTTTCAGACGACAGGCTTT-GTGATCCACAACTGTACAGTTGCTCCAAACGAAGATCTT 1500
Query 1531 AAGCCAGTAAAGGAAGAGTACAAGAGCTACCTCGGGAGACCGTGGAAGA-ACTACTCTCG 1589
|| || ||||||| ||| ||||||||| ||||| | || ||||| | | | |||||
Sbjct 1501 AAACCCGTAAAGGCCCAGTTCAAGAGCTATCTCGGCCGGCCATGGAA-ACCCCATTCTCG 1559
Query 1590 AACGA-TCATAATGGAATCTAA-AATCGAGAATGTGATTGACCCTGTTGGATGGTTGAGA 1647
||| | || | |||||||| || |||||| ||||||| || |||||||| |||||||||
Sbjct 1560 AAC-AGTCGTGATGGAATC-AACGATCGAGGATGTGATCGATCCTGTTGGTTGGTTGAGA 1617
Query 1648 TGGCAAGAGACGGATTTTGCGATAGACACACTCTACT-ACGCGGAGTACAATAACAAAGG 1706
|||||||||||||||||||| || || ||| | | || ||||||| ||||| || | ||
Sbjct 1618 TGGCAAGAGACGGATTTTGCTATCGATACATTGT-CTTACGCGGAATACAAGAATGATGG 1676
Query 1707 ATC-AAGTGGAG-ATACAACTTCAAGAGTTAAATGGCCTGGATTTAAGGTCATAAACAAG 1764
|| ||| |||| | || || | || ||||||||||||||||||| ||| ||||||||
Sbjct 1677 -TCCAAGCGGAGCA-ACCGCTGCTAGGGTTAAATGGCCTGGATTTAGGGTTTTAAACAAG 1734
Query 1765 GAGGAGGCTTTGAACTTTACAGTTGGGCCCTTCTTACAAGGAGATTGGATC-A-GTGCCT 1822
|| ||||| |||| ||||| || ||||| ||||||||||| || |||||| | | | |
Sbjct 1735 GAAGAGGCGATGAAATTTACGGTGGGGCCATTCTTACAAGGGGAATGGATCCAAGCGA-T 1793
Query 1823 CAGGTTCTCCCGTTAAG-TTGGGTCTTTATGATGCTT 1858
||| ||||| |||||| |||| ||||| |||||||
Sbjct 1794 -AGGGTCTCCGGTTAAGCTTGGC-CTTTACGATGCTT 1828
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 92067799530
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5