BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg320480 Length=1044 Score E Sequences producing significant alignments: (Bits) Value AT2G26950.1 | Symbols: AtMYB104, MYB104 | myb domain protein 10... 630 6e-180 > AT2G26950.1 | Symbols: AtMYB104, MYB104 | myb domain protein 104 | chr2:11500721-11502136 REVERSE LENGTH=1212 Length=1212 Score = 630 bits (341), Expect = 6e-180 Identities = 605/725 (83%), Gaps = 47/725 (6%) Strand=Plus/Plus Query 294 ATTGAAACGACTTGGTTTACCAGTTTACCCTGATAAAGTTCGAAAGCAGGCGATAAGTAC 353 ||||||| || ||||||||||||||||||||| |||||||| ||||||||||| |||| Sbjct 417 ATTGAAAGGAAAGGGTTTACCAGTTTACCCTGATGAAGTTCGAGAGCAGGCGATACGTAC 476 Query 354 AGCATTACGAA-ATGGTCT-AAAGATTGATTTATTGGATG--C-------TCAAGACTTG 402 |||| || || ||||| | |||| |||| |||||| ||| | |||||||| Sbjct 477 AGCAGCAC-AATATGGTGTAAAAG-TTGAATTATTGAATGCTCATTATAGTCAAGACTCA 534 Query 403 TTGATGGTAGATAACGTCGAGAAACCTGACGCGGCACTCAATAACTTGCCACTCAATCAA 462 ||||||| || || |||||||||||| | | ||||||||||||| ||||||||||| Sbjct 535 TTGATGGCAGGCAATGTCGAGAAACCT--C-AAGAACTCAATAACTTGGCACTCAATCAA 591 Query 463 TTTTCTTCATACTACCAGTCAATGCTTGCCAATGTTCAGCCT-------A----G----G 507 | |||| | || |||||||||| ||||||||||||||||||| | | | Sbjct 592 TGTTCTCCGTATTACCAGTCAACGCTTGCCAATGTTCAGCCTAGCCGCAATCGCGTTATG 651 Query 508 GAACCAGAAACCACATTTCCTTTCACAAATGGGTATGTCATGAACGAGCAAAACCCTAAC 567 ||||||||||| |||||||||||||| ||| | || ||||||||||||||||||| || Sbjct 652 GAACCAGAAACAACATTTCCTTTCACGGGTGGATCTGCCATGAACGAGCAAAACCCT-AC 710 Query 568 -CTCTTGAATTATCTTTCCGTGGATAGCACTCAAGAACAATTACCTGACATCCATTTGTT 626 |||||| | ||| || |||||| |||||||||||||| |||||||||| ||||||||| Sbjct 711 TCTCTTGTGTAATCCTTACGTGGAGAGCACTCAAGAACAGTTACCTGACAGCCATTTGTT 770 Query 627 TGGCAATGCTACATGTTCTTCTCCTCCTATGCCTCTCATTCACGGGGTTGGGAACTTGGA 686 ||| |||| ||||| ||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct 771 TGGAAATGTTACATATTCTTCTCCTCCTATGCCTCTCATTCACGAGGTTGAGAACTTGGA 830 Query 687 GCTCCCTTCATTCCAAGGATTTAATGCTCATGAAGTGCCTAGCAGTTTTGGAGCAGAACA 746 |||||||||||||||||| ||| || |||||||| |||||||||||||||||||||||| Sbjct 831 GCTCCCTTCATTCCAAGGCTTTGATTTTCATGAAGAGCCTAGCAGTTTTGGAGCAGAACA 890 Query 747 ATATAACCCAATGATGAATCTTGAGCCAGACAACACTTTGGTTCAGCCCCCTTTGATAGG 806 ||||||||||||| |||||||||||||| ||||||||||||| ||| | ||| ||||||| Sbjct 891 ATATAACCCAATGCTGAATCTTGAGCCACACAACACTTTGGTCCAGTCTCCTCTGATAGG 950 Query 807 CCAAACACCAACAGATTTCCCATCATCATTCTATGATGAATTGTTGGA--A-T------- 856 ||| |||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 951 CCAGACACCAACAGATTTCCCATCATCATTCTATGATGAATTGTTGGATGAATTGTTGGA 1010 Query 857 --CAGTTGTTTATGGTTCAGTAGGAGAAAGACCGAAAACCGATACCAGCTCGGAGCTCCC 914 |||||||| | |||||| ||||||||| |||||||||||||||||| |||||| |||| Sbjct 1011 ATCAGTTGTTAACGGTTCATTAGGAGAAATACCGAAAACCGATACCAGTTCGGAG-TCCC 1069 Query 915 ACCT-TTTCCGTCCTCCCTACTTAGCCATACCGAGGTTACACCACCCATTGCAAACACAA 973 | || |||| |||||| |||| |||||||||||| | ||||||| |||||||||||||| Sbjct 1070 AACTGTTTCAGTCCTCTCTACGTAGCCATACCGATGCTACACCAGACATTGCAAACACAA 1129 Query 974 TTGGT 978 |||| Sbjct 1130 CTGGT 1134 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 51188595793 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5