BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg320730
Length=1326
Score E
Sequences producing significant alignments: (Bits) Value
AT2G29800.1 | Symbols: | Galactose oxidase/kelch repeat superf... 1434 0.0
AT2G29600.1 | Symbols: | Galactose oxidase/kelch repeat superf... 920 0.0
AT2G29810.1 | Symbols: | Galactose oxidase/kelch repeat superf... 551 7e-156
AT2G29780.1 | Symbols: | Galactose oxidase/kelch repeat superf... 204 2e-51
AT2G29820.1 | Symbols: | Galactose oxidase/kelch repeat superf... 204 2e-51
> AT2G29800.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr2:12722939-12724602 REVERSE LENGTH=1565
Length=1565
Score = 1434 bits (776), Expect = 0.0
Identities = 1045/1174 (89%), Gaps = 22/1174 (2%)
Strand=Plus/Plus
Query 161 aagaagaagaagagaatcaaaacgaggacgcgaaagaagaagatcaagaagacgatcaag 220
|||||||| ||||||||||||||||| || |||| |||| |||| |||||||||||||
Sbjct 86 AAGAAGAAAAAGAGAATCAAAACGAGAACCCGAATGAAGCAGATGAAGAAGACGATCATC 145
Query 221 aagatgaagaagtagagaaTCATCCTCCGATTCCTCGAGTAATCCCACCAGAACTAATCG 280
|||| ||||||||||||||| |||||||||||||||| ||||||||||| ||||||||
Sbjct 146 AAGACGAAGAAGTAGAGAATGTTCCTCCGATTCCTCGAAAAATCCCACCAGTACTAATCG 205
Query 281 AAAACACCATCGCACTCATCCGGAGATGTCATTACCCGTCGCTATCTCTCCTCTCTAACG 340
||||||| ||||||| | |||||||||||||||||||| ||||||||||||||||||||
Sbjct 206 AAAACACTATCGCACCCCTCCGGAGATGTCATTACCCGAAGCTATCTCTCCTCTCTAACG 265
Query 341 CCTTTCGTCAAGTAATCTCTTCAGAGGATCTCTTCCAAATTCGCTCGCGCATCGGTTTGA 400
|||||||||||||||||||||||||||||||||||||| ||||||||| |||||| | |
Sbjct 266 CCTTTCGTCAAGTAATCTCTTCAGAGGATCTCTTCCAAGTTCGCTCGCTCATCGGCTCAA 325
Query 401 CCGAACCGGTTCTTTATACCTTGATCACGTTCAAGTACCCAACTTTTGAAGAACCAAGAT 460
| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct 326 CGGAACCGGTTCTTTATACCTTGATCACGTTCAAGTACCCAACATTTGAAGAAGGAAGAT 385
Query 461 GGTTCATTCTCCATCGGAGCAACAA--C-TCCTTACAATTGAACAGAGTTACTTCTCTTC 517
||||||||||||| ||||| ||||| | || ||| |||||||| | || || |||||||
Sbjct 386 GGTTCATTCTCCAACGGAGAAACAATACCTCTTTAAAATTGAACTGTGTAACATCTCTTC 445
Query 518 CTCCCATGTTTCTTGGATGCACTGCCGTCACAATGGGACACAAGATTTACGTAATGGGTG 577
|||||||||||||||||||||||||||||||||| || ||||||||||| ||| ||||||
Sbjct 446 CTCCCATGTTTCTTGGATGCACTGCCGTCACAATAGGTCACAAGATTTATGTAGTGGGTG 505
Query 578 GTTATAACCTCCGCTATAATCGAGCCGTAGGGACTATGCTTGCCATAGATTGCAGATTCA 637
|||||||| ||||||| ||| | || || | ||| |||||| |||||||| |||||||
Sbjct 506 GTTATAACTTCCGCTACAATAAAACCATAAGTACTGTGCTTGAGATAGATTGTAGATTCA 565
Query 638 ATACGTCTCGACAGCTCCGGAGTATGAAGAGGGATCGTTGCTACGCAGTCGCTGGAGTGA 697
|||||| |||||| ||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 566 ATACGTGTCGACATCTCCGGAATATGAAGAGGGATCGTTGCTCCGCAGTCGCTGGAGTGA 625
Query 698 TCGACGGAAGGATTTACGTAGTCGGAGGACGCGAGAGACGAATTAATGATTGGGTCGAAG 757
|||||||||||||||||||||||| |||||| |||||||| || |||||||||||||||
Sbjct 626 TCGACGGAAGGATTTACGTAGTCGCCGGACGCCAGAGACGATTTGATGATTGGGTCGAAG 685
Query 758 TGTTCGATGTAGAGACTGAGAGATGGGCACTTGTGCCTGGTCCATTCTCTCCCATTGCTA 817
||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||
Sbjct 686 TGTTCGATGTAGAGACTGAGAGATGGGAACTTGTGCCTGGTCCATTCTCTTCCTTTGCTA 745
Query 818 GTTCTAGTGGAGAGTTTGTTACACATGTGGTTTTGGATAATAAGATTTACATTATAGATG 877
||||||||||| ||||| || ||||||||||||||||||||||||||||||||| ||||
Sbjct 746 GTTCTAGTGGAAAGTTTATTGTACATGTGGTTTTGGATAATAAGATTTACATTATGGATG 805
Query 878 GTGATTTTTGTTTTGCGTACGATCCAAGACAACGTACATGGCAGACTTGGGGACCTGAAA 937
|||| | ||||||||||||||||||||| | ||||| |||| ||||||||||||||||||
Sbjct 806 GTGACTATTGTTTTGCGTACGATCCAAGGCGACGTAGATGGGAGACTTGGGGACCTGAAA 865
Query 938 GTGTACAGAGGAGGTT-TTGGCACGCGTCGTCTTGTGTGGTTGATGATTTGTTGTATGCC 996
||| ||||||||| || ||||||| |||||||||||||||||||||||||||||| ||
Sbjct 866 GTGCACAGAGGAG-TTATTGGCACTTGTCGTCTTGTGTGGTTGATGATTTGTTGTACGCG 924
Query 997 ACTGTTCCTCGGGAGATTGTTGGAG-TTCCAATTGTCGTGTATGATCCAAGGG-AAGTGG 1054
| |||||||||||||||| |||||| ||| | ||||||| ||||||||||||| || | |
Sbjct 925 ATTGTTCCTCGGGAGATTTTTGGAGCTTCGA-TTGTCGTTTATGATCCAAGGGGAA-TAG 982
Query 1055 CTTGGAGACATGTCAAGGGTTTAGAGTTTTGGCCTAATCTCGTTTATATT-GAGTCTAGA 1113
||||||||| ||||| ||||||||||||||||||||||||||||||| || ||||||| |
Sbjct 983 CTTGGAGACCTGTCATGGGTTTAGAGTTTTGGCCTAATCTCGTTTAT-TTCGAGTCTAAA 1041
Query 1114 ATGACGAATTTTGGTGGGAAGTTGGTGATTTTGGGATGTTATCAAAGCCGGGAGAGTTTT 1173
||| ||||||||||||||||||||||||||||||||||||||| | | | ||||||
Sbjct 1042 ATGGCGAATTTTGGTGGGAAGTTGGTGATTTTGGGATGTTATC---G--GAGT-AGTTTT 1095
Query 1174 GATTATTACAGGGAAATAGATGTTTGGTGCGTAGAGGTTGCATTGGAAAAACGTGAAGAT 1233
||||||||||| ||| ||| ||||||||||| ||||| || ||||| |||| |||||||
Sbjct 1096 GATTATTACAG--AAA-AGACGTTTGGTGCGTTGAGGTGGCTTTGGAGAAACATGAAGAT 1152
Query 1234 GGTGATATTTGGGGGAAGGTCCAATCACTCTCGCTTGTGAATACATTCCGCAAAC-CGCC 1292
||| | ||||||||||||||| |||||||||||||||||||| |||||| | | ||||
Sbjct 1153 GGTCAAATTTGGGGGAAGGTCGAATCACTCTCGCTTGTGAATGCATTCC-CTATGTCGCC 1211
Query 1293 tttttttGAACTTTCTCGAACTGTTACGGTTTGA 1326
||| ||||| |||||||||||||||||| |||||
Sbjct 1212 TTTCTTTGAGCTTTCTCGAACTGTTACGATTTGA 1245
> AT2G29600.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr2:12655151-12657296 FORWARD LENGTH=2057
Length=2057
Score = 920 bits (498), Expect = 0.0
Identities = 940/1148 (82%), Gaps = 51/1148 (4%)
Strand=Plus/Plus
Query 206 aagaagacgatcaagaagatgaagaagtagagaaTCATCCTCCGATTCCTCGAGTAATCC 265
||||||||||||| |||| ||||||||||||||| ||||| |||||||| | ||| |
Sbjct 635 AAGAAGACGATCATCAAGAAGAAGAAGTAGAGAATGTTCCTCAGATTCCTCCACAAATGC 694
Query 266 CACCAGAACTAATCGAAAACACCATCGC-ACTCATCCGGAGATGTCATTACCCGTCGCTA 324
||| ||||||||||| || ||||||||| |||| |||||||||||||||||||| |||||
Sbjct 695 CACTAGAACTAATCGTAAGCACCATCGCGACTC-TCCGGAGATGTCATTACCCGACGCTA 753
Query 325 TCTCTCCTCTCTAACGCCTTTCGTCAAGTAATCTCTTCAGAGGATCTCTTCCAAATTCGC 384
|||||||||||| || |||||||||||||||||||||| | |||||||||||||| ||||
Sbjct 754 TCTCTCCTCTCTGACTCCTTTCGTCAAGTAATCTCTTCGGTGGATCTCTTCCAAACTCGC 813
Query 385 TCGCGCATCGGTTTGACCGAACCGGTTCTTTATACCTTGATCACGTTCAAGTACCCAACT 444
|||| |||||| | ||| ||||||||||||||||||||||||||||||| || ||||| |
Sbjct 814 TCGCTCATCGGCTCGACGGAACCGGTTCTTTATACCTTGATCACGTTCACGTCCCCAAAT 873
Query 445 TTTGAAGAACCAAGATGGTTCATTCTCCATCGGAGCAACAA--C-TCCTTACAATTGAAC 501
|||||||||||||||||||| |||||||| ||||| ||||| | || |||||||||| |
Sbjct 874 TTTGAAGAACCAAGATGGTTTATTCTCCAACGGAGAAACAATACCTCTTTACAATTGAGC 933
Query 502 AGAGTTACTTCTCTTCCTCCCATGTTTCTTGGATGCACTGCCGTCACAATGGGACACAAG 561
||| || ||||||||||||||||||| |||||||||| |||||||||| |||||||||
Sbjct 934 TTAGTCACATCTCTTCCTCCCATGTTTCCTGGATGCACTACCGTCACAATCGGACACAAG 993
Query 562 ATTTACGTAATGGGTGGT-T-ATAACCTCCGCTATAATCGA-GCCGTAGGGACTATGCTT 618
|||||||| |||||||| | | || || | | | |||| || | | |||| || ||
Sbjct 994 ATTTACGTTATGGGTGGACTCAGAAGCTT-G--A-A-TCGACGC-GCAAAGACTGTGTTT 1047
Query 619 GCCATAGATTGCAGATTCAATACGTCTCGAC-AGCTCC-GGAGTATG-AAGAGGGATCGT 675
| ||| || ||||||||| |||||| || | | |||| |||| ||| ||| || ||||
Sbjct 1048 GTCATCGACTGCAGATTCCATACGTGGCG-CTATCTCCAGGAG-ATGCAAGTGGC-TCGT 1104
Query 676 TGCTACGCAG-TCGCTGGAGTGATCGACGGAAGGATTTACGTAGTCGGAGGA-CG-CGAG 732
| |||||||| | ||| |||||| ||||||| ||||||||| || ||||| | | |
Sbjct 1105 TCCTACGCAGCTT-CTGCAGTGATTGACGGAATGATTTACGTGGTGGGAGGTTCCACTA- 1162
Query 733 AGACGAATTAATGATTGGGTCGAAGTGTTCGATGTAGAGACTGAGAGATGGGCACTTGTG 792
| ||||| | |||||||||||||||||||| ||||||||||| | | |||| | ||||
Sbjct 1163 A-ACGAAGTGATGATTGGGTCGAAGTGTTCAATGTAGAGACTAATACTTGGGAAAATGTG 1221
Query 793 CCTGGTCCATTCTCTCCC-ATTGCTAGTTCTAGTGGAGAGTTTGTTACACATGTGGTTTT 851
||| || ||| || ||| || | | |||| | | | |||| | ||| | |||||
Sbjct 1222 CCTAGTGTATTATCCCCCTATGG-TCGTTCGAAAGCACCGTTTAATGTTCATTTCGTTTT 1280
Query 852 GGATAATAAGATTTACATTATAGATGGTGATTTTTGTTTTGCGTACGATCCAAGACAACG 911
||||||||||||||||||| | |||||| | | || | || ||||||| |||| |||
Sbjct 1281 GGATAATAAGATTTACATTTTGGATGGTAACAATCGTGTGGCTTACGATCTAAGAGGACG 1340
Query 912 TACATGGCA-GACTTGGGGACCTGAAAGTG-TACAGA--GGAGGT-TTT--GGCACGCGT 964
|| |||| | || ||||||||||| | | | || | || ||| ||| |||| | ||
Sbjct 1341 TAGATGGGAAGA-TTGGGGACCTGCAGGAAAT-CA-ATTGG-GGTATTTCTGGCAGGTGT 1396
Query 965 CGTCTTGTGTGGTTGATGATTTGTTGTATGCCACTGTTCCTCGGGAG-A--TTGTTGGAG 1021
|| ||||||||||||| |||||||||||||| |||||| || | | || || |
Sbjct 1397 TGTATTGTGTGGTTGATAATTTGTTGTATGCCGTTGTTCC--GG-ATCACCTTCATGTAA 1453
Query 1022 TTCCAATTGTCGTGTATGATCCAAGGGAAGTGGCTTGGAGACATGTCAAGGGT-TTAGAG 1080
||| |||||||||||||||||||| ||| ||| |||||||| ||||| |||| || ||
Sbjct 1454 CTCCCATTGTCGTGTATGATCCAAGAGAAATGGGTTGGAGACCTGTCATGGGTGTT-GA- 1511
Query 1081 TT--TTGGCCTAATCTCGTTTATATTGAGTCTAGAATGACGAATTTTGGTGGGAAGTTGG 1138
|| ||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1512 TTACTTG-CCTAACCTCGTTTATAGTGAGTCTAGAATGACGAATTTTGGTGGGAAGTTGA 1570
Query 1139 TGATTTTGGGATGTTATCAAAGCCGGGAGAGTTTTGATTATTACAGGGAAATAGATGTTT 1198
|||||||||||||||||||||||| || || |||||||||||| ||||| || ||||||
Sbjct 1571 TGATTTTGGGATGTTATCAAAGCCAGGCTAGGTTTGATTATTACGGGGAAGTAAATGTTT 1630
Query 1199 GGTGCGTAGAGGTTGCATTGGAAAAACGTGAAGATGGTGATATTTGGGGGAAGGTCCAAT 1258
||||||||||||| || ||||| | ||||||||||||||| |||||||||||||||||||
Sbjct 1631 GGTGCGTAGAGGTGGCGTTGGAGAGACGTGAAGATGGTGAAATTTGGGGGAAGGTCCAAT 1690
Query 1259 CACTCTCGCTTGTGAATACATTCCGCAAACCGCCtttttttGAACTTTCTCGAACTGTTA 1318
|||||||||||||||||| ||||||||| ||||| | |||| ||||||||||||||||
Sbjct 1691 CACTCTCGCTTGTGAATAAATTCCGCAAGTCGCCTGTCTTTGTGCTTTCTCGAACTGTTA 1750
Query 1319 CGGTTTGA 1326
||||||||
Sbjct 1751 CGGTTTGA 1758
> AT2G29810.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr2:12726102-12727253 REVERSE LENGTH=1152
Length=1152
Score = 551 bits (298), Expect = 7e-156
Identities = 868/1133 (77%), Gaps = 79/1133 (7%)
Strand=Plus/Plus
Query 226 gaagaagtagagaaTCA-TCCTCCGATTCCTCGAGTAA-TCCCACCAGAACTAATCGAAA 283
||||||| ||||||| | ||||||||||||| || || | ||| |||||| |||| ||
Sbjct 67 GAAGAAGAAGAGAAT-ATTCCTCCGATTCCTAAAG-AACTTCCAGAAGAACTCATCGTAA 124
Query 284 ACACCATCGCACTCATCCGGAGATGTCATTACCCGTCGCTATCTCTCCTCTCTAACGCCT 343
|| | |||||||| ||||||||| ||| |||||| |||||||||| |||| || ||||
Sbjct 125 TCATCGTCGCACTCGTCCGGAGATATCACTACCCGAAGCTATCTCTCATCTCCAAAGCCT 184
Query 344 TTCGTCAAGTAATCTCTTCAGAGGATCTCTTCCAAATTCGCTCGCGCATCGGTTTGACCG 403
|||| | ||||||||||| ||| |||||||||| ||||||||| | || || ||||
Sbjct 185 ATCGTGACCTAATCTCTTCACCGGAACTCTTCCAAACACGCTCGCGCCTAGGCTTCACCG 244
Query 404 AACCGGTTCTTTATACCTTGATCACGTTCAAGTACCCAACTTTTGAAGAACCAAGATGGT 463
|||||||||||||||||| || || | | |||| ||||||| ||||| ||||
Sbjct 245 AACCGGTTCTTTATACCTCAAT--CG---GA-TTCCCACCTTTTGATCTCCCAAGCTGGT 298
Query 464 TCATTCTCCATCGGAGCAACAACTCCTTACAATT-GAACAGAGTTACTTCTCTTCCTCCC 522
||||||||||| | | | ||| ||||| || |||| | | ||||| |||||| |
Sbjct 299 ACATTCTCCATC---G--A-ATCTCATTACAGTTCAAACA-AATCACTTCACTTCCTTCA 351
Query 523 ATGTTTCTTGGATGC-ACTGCCGTCACAATGGGA-CACAAGATTTACGTAATGGGTGGTT 580
||| ||| ||||| | ||| |||||||| || ||||||| || ||| | |||||
Sbjct 352 ATGCTTCCTGGAT-CTGCTGTTGTCACAAT-CGATTACAAGATGTATGTACTCGGTGG-- 407
Query 581 ATAACCTCCGCTAT-AATCGAGCC-GTAGGGACTATGCTTGCCATAGATTGCAGATTCAA 638
|| | || ||| | |||| | || ||| ||||||| ||| ||| ||||| |||||| |
Sbjct 408 AT-TCATCGGCT-TGAATC-AACCTGTATCGACTATGATTGTCATCGATTGTAGATTCCA 464
Query 639 TACGTCTCGACAGCTCCGGAGTATG-AAGAGGGATCGTTGCT-ACGCAGTCGCTGGAGTG 696
||||| ||| |||||| |||||| || |||||||| | | ||||| ||| ||||||
Sbjct 465 TACGTATCGTGAGCTCCCTAGTATGCAA-AGGGATCG-CGGTGGCGCAGCCGCGGGAGTG 522
Query 697 ATCGACGGAAGGATTTACGTAGTCGGAGGACGCGAGAGACGAAT-TAATGATTGGGTCGA 755
|| || |||| |||||||||| ||||||| || ||| ||| || |||||||||||| ||
Sbjct 523 ATTGATGGAAAGATTTACGTAATCGGAGGTTGCAAGAAACG-ATATAATGATTGGGTTGA 581
Query 756 AGTGTTCGATGTAGAGACTGAGAGATGGG-CACTTGTGCCTGGTCCATTCTCTCCCATTG 814
||||||||||||||||| |||||| |||| || |||||||||||||| | || | |||
Sbjct 582 AGTGTTCGATGTAGAGAATGAGAGTTGGGAAAC-TGTGCCTGGTCCATACCCTAACGTTG 640
Query 815 CTAGTTCTAGTGGAGAGTTT-GTTACACATGTGGTTTTGGATA-ATAAGATTTACATTAT 872
| ||| |||| ||||||| || | | ||| ||| |||| | | |||||||||||| |
Sbjct 641 CAAGTGAGAGTGTAGAGTTTAGTCA-ATATGCGGTAATGGA-ACAGAAGATTTACATTTT 698
Query 873 AGATGGTGAT-TTTTGTTTTG-CGTACGATCCAAGACAACGTACA-TGGCAGACTTGGGG 929
||| | | ||||| |||| | ||||| |||||| |||||| | | | || | |||||
Sbjct 699 GGATCCT-CTGTTTTG-TTTGACTTACGAACCAAGAAAACGTAGATTTG-AGGCATGGGG 755
Query 930 ACCTGA-AAGTGTACAGAGGAGGTTTTGGCACGCGTCGTCTTGTGTGGTTGATGATTTGT 988
|| | | |||| |||||||||| | ||| ||||| |||||||||| ||||| |||
Sbjct 756 ACGT-AGAAGTCAACAGAGGAGG---T---ACGAGTCGTGTTGTGTGGTTAATGATATGT 808
Query 989 TGTATGCCACTG-TTCCTCGGGAGATTGT--TGGAGT-TCCAATTGTCGTGTATGATCC- 1043
||| | || || || || | | || | |||| | ||| |||||||||||||||||
Sbjct 809 TGTGTACCGTTGATT-CT-ACGTG-TTCTCATGGA-TATCCGATTGTCGTGTATGATCCA 864
Query 1044 AAGGGAAGTGGCTTGGAGACATGTCAAGGGT-T-TAGAG-T-T--TTGGCCTAATCTCGT 1097
||||| | ||| |||||||| ||| |||||| | | || | | || ||||||||||||
Sbjct 865 AAGGGTA-TGGTTTGGAGACCTGTGAAGGGTGTACAAAGTTCTGATTTGCCTAATCTCGT 923
Query 1098 TTA-TATTGAGTCTAGAATGACGAATTTTGGTGGGAAGTTGGTGATTTTGGGATGTTATC 1156
||| || ||||||||||||| ||||||||||||| ||||||||||||||||| || |||
Sbjct 924 TTACTA-TGAGTCTAGAATGGCGAATTTTGGTGGTAAGTTGGTGATTTTGGGCGGTAATC 982
Query 1157 AAAGCCGGGAGAGTTTTGATTA-TTACAGGGAAATAGATGTTTGGTGCGTAGAGGTTGCA 1215
| |||||||| || || || |||| ||||| ||| |||||||| ||||| |||||
Sbjct 983 AGAGCCGGGATCGTAAGGA-TAGTTACTTGGAAAAAGACATTTGGTGCATAGAGATTGCA 1041
Query 1216 TTGGAAAAACGTGAAGATGGTGATATTTGGGGGAAGGTCCAATCACTCTCGCTTGTGAA- 1274
||||||||||||||||||||||||||||||| | ||| ||||| ||| |||||
Sbjct 1042 CTGGAAAAACGTGAAGATGGTGATATTTGGGGTCATGTCGAATCAAGATCGGTTGTGCTG 1101
Query 1275 TACATTCC-GCAAACCGCCtttttttGAACTTTCTCGAACTGTTACGGTTTGA 1326
| ||| || |||| |||||| ||| ||| |||| ||||||||||||||
Sbjct 1102 T-CAT-CCAGCAAGTGGCCTTTGATTGCGCTTAGTCGATCTGTTACGGTTTGA 1152
> AT2G29780.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr2:12717786-12719328 REVERSE LENGTH=1467
Length=1467
Score = 204 bits (110), Expect = 2e-51
Identities = 187/224 (83%), Gaps = 6/224 (3%)
Strand=Plus/Plus
Query 206 aagaagacgatcaagaagatgaagaagtagagaaTCATCCTCCGATTCCTCGAGTAATCC 265
||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||
Sbjct 86 AAGAAGACGATCATCAAGAAGAAGAAGTAGAGAATCATCCTCCGATTCCTCGACAAATCC 145
Query 266 CACCAGAACTAATC-GAAAACACCATCGCACTCATCCGGAGATGTCATTACCCGTCGCTA 324
||| || ||| ||| ||| | ||| ||||||||||| ||||||||||||||||||||||
Sbjct 146 CACAAGCACTCATCAGAAGA-ACCGTCGCACTCATCAAGAGATGTCATTACCCGTCGCTA 204
Query 325 TCTCTCCTCTCTAACGCCTTTCGTCAA-GTAATCTCTTCAGA-GGATCTCTTCCAAATTC 382
|||||||||||||| ||||||||| | ||||||||||| | ||| ||| ||||| |
Sbjct 205 TCTCTCCTCTCTAAAGCCTTTCGT-ATCGTAATCTCTTC-GCCGGAACTCCACCAAACAC 262
Query 383 GCTCGCGCATCGGTTTGACCGAACCGGTTCTTTATACCTTGATC 426
||||| || | | ||||||||||||||||| | ||||||
Sbjct 263 GCTCGAGCCTAAACCTAACCGAACCGGTTCTTTACGCTTTGATC 306
> AT2G29820.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr2:12728362-12729528 REVERSE LENGTH=1167
Length=1167
Score = 204 bits (110), Expect = 2e-51
Identities = 692/960 (72%), Gaps = 92/960 (10%)
Strand=Plus/Plus
Query 226 gaagaagtagagaaTCATCCTCCGATTCCTCGAGTAA-TCCCACCAGAACTAATCGAAAA 284
|||||||||||||||| | || || || || || || | ||| |||||| |||| |||
Sbjct 97 GAAGAAGTAGAGAATC-T--TCGGAATCTTCTAG-AACTTCCAGAAGAACTCATCG-AAA 151
Query 285 CAC-CATCGCACTCATCCGGAGATGTCATTACCCGTCGCTATCTCTCCTCTCTA-ACGCC 342
|| |||||||| ||||| |||||| ||||||||| |||||||| |||| | | | |
Sbjct 152 GACTCATCGCACACATCCCAAGATGTTATTACCCGTATATATCTCTCGTCTCCAGA-GAC 210
Query 343 TTTCGTCAAGTAATCTCTTCAGAGGATCTCTTCCAAATTCGCTCGCGCATCGGTTTGACC 402
||||||||||||||| |||| || | || |||| || ||||||| | |||| || | |
Sbjct 211 TTTCGTCAAGTAATCACTTCGGATAAACTATTCCGAACGCGCTCGCTCCTCGGCTTCAAC 270
Query 403 GAACCGGTTCTTTATACCTTGATCACGTTCAAGTACCCAACTTTTGAAGAACC-AAGATG 461
||||||||||||||| |||| | | || | | || || || || ||| ||
Sbjct 271 GAACCGGTTCTTTATGCCTT-A--A---TC--GGATCC-AC-ACAGACTCCCCTAAGCTG 320
Query 462 GTTCATTCTCCATCGGAGCAACAACTCC-TTACAATTGA-ACAGAGTTAC-TTCTCTTCC 518
|||| |||| | | |||||||| | || ||| |||| | ||||| | | ||| |||||
Sbjct 321 GTTCTTTCTTCGTTGGAGCAACTTC-CCATTAGAATT-ACACAGA-ATCCGTTCACTTCC 377
Query 519 TCCCA-TGTTTCTTGGATGCA-CTGCCGTCACAATGGGACACAAGATTTACGTAATGGGT 576
| || |||| |||||| ||| ||| |||||||| ||| ||||||| || ||||||||
Sbjct 378 T-ACAGTGTTACTTGGA-GCAGCTGTGGTCACAATCGGATACAAGATGTATGTAATGGGA 435
Query 577 GGTTATAACC-TCCGCTAT-AATCGAGC-CGTAGGGACTATGCTTGCCATAGATTGCAGA 633
|| | ||| || ||| | |||| | | ||| |||| || ||| ||| || ||||||
Sbjct 436 GG---T-ACCATCGGCT-TGAATC-ATCATGTATCGACTGTGATTGTCATCGACTGCAGA 489
Query 634 TTCAATACGTCTCG-AC-AGCT-CCGGAGTATGAAGAGGGATCGTTGCTACGCAGTCGCT 690
| ||||| | | || | || ||||| |||||| |||| ||||| | |||| |||
Sbjct 490 AACCATACG--TGGAACTATCTCCCGGA-TATGAAAAGGGCTCGTTACCGTGCAGCCGCC 546
Query 691 GGAGTGATCGACGGAAGGATTTACGTAG-TCGGAGGACGCGAGAGACGAA-TTAATGATT 748
|||| || | |||||||||||| || | ||||||||||| ||| || || | |||||
Sbjct 547 GGAGAAATTGGCGGAAGGATTTATGT-GATCGGAGGACGCAAGAAAC-AAGATGCTGATT 604
Query 749 GGGTCGAAGTGTTCGATGTAGA-GACTGAGAGATGGG-CACTTGTGCCTGGTCCATTCTC 806
|||| ||||||||| ||| || ||||||||| |||| || |||| || || || | |
Sbjct 605 GGGTTGAAGTGTTCAATG-CGACGACTGAGAGTTGGGAAAC-TGTGTCTAGTGTATGCCC 662
Query 807 T-CCCATTGCTAGTTCTAGTGGAG-AGTTTGT-TACACATGTGGTTTTGGATAATAAGAT 863
| | | ||||||| | | ||||| | ||| | |||| ||||||| || | | |||
Sbjct 663 TAACGA-TGCTAGTGCGAATGGAGTA-TTT-TCTACATATGTGGTGATGCAGGGGAGGAT 719
Query 864 TTAC-ATTATAGAT-GGTGATTTTTGTTTTGCGTACGATCCAAG-ACAACGTACATGGCA 920
|| | || | ||| | || ||||||||| ||| | || || |||| || ||||||
Sbjct 720 TTTCGCTT-TGGATCGTTG-GGGTTGTTTTGCTTACAAACC-AGTACAAGGTTTATGGCA 776
Query 921 GACTTGGGGACCTGAAAGTGTA-CAGAGGAGGTTTTGGCA--CG-CGTCGTC--TT-GTG 973
| | ||||| || ||||| | || ||| |||||||| || |||||| || ||
Sbjct 777 GTCATGGGGTGTTGCAAGTG-AGTTGACGAGATTTTGGCACCCGTTGTCGTCGTTTACTG 835
Query 974 TGGTT-GATGATTTGTTGTATGCCA-CTGTTCCTCGGGAGAT-TGTTGGAGTTCCAATTG 1030
|| || || || ||||||||| || || | || | | | | ||||| ||| || |
Sbjct 836 TGATTGGA-GAGTTGTTGTAT-ACAGTTGAT-CTTACGTGTTCTCTTGGACATCCGATAG 892
Query 1031 TCGTGTATGATCC-AAGGGAAGT-GGCTTGGAGACATGTCAAGGGTTTAGAGTTTTGGCC 1088
| || ||| |||| || ||| | || |||||||| ||| | |||||| | ||| |||
Sbjct 893 TGGTATATTATCCGAA-TGAA-TCGGTTTGGAGACCTGTGATGGGTTTTCA--TTT-GCC 947
Query 1089 TAATCTC-GTTTATATTGAGT-CTAGAATGA-CGAATTTTGGTGGGAAGTTGGTGATTTT 1145
|| |||| || || ||| || | || || | ||||||||||||||||||||||||||||
Sbjct 948 TATTCTCAGTCAATGTTG-GTCCAAG-AT-AGCGAATTTTGGTGGGAAGTTGGTGATTTT 1004
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 65260708500
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5