BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg320885
Length=975
Score E
Sequences producing significant alignments: (Bits) Value
AT2G31350.1 | Symbols: GLX2-5 | glyoxalase 2-5 | chr2:13368292-... 1624 0.0
AT1G06130.1 | Symbols: GLX2-4 | glyoxalase 2-4 | chr1:1857767-1... 1011 0.0
> AT2G31350.1 | Symbols: GLX2-5 | glyoxalase 2-5 | chr2:13368292-13371057
FORWARD LENGTH=1389
Length=1389
Score = 1624 bits (879), Expect = 0.0
Identities = 943/975 (97%), Gaps = 0/975 (0%)
Strand=Plus/Plus
Query 1 ATGCAAACCATCTCAAAAGCTTCTTCTGCTATCTCCTTCTTTCGATGTTCTAGGAAGCTA 60
|||||||||||||| |||||||||||||| | |||||| |||||||||||||||||||||
Sbjct 160 ATGCAAACCATCTCGAAAGCTTCTTCTGCCACCTCCTTTTTTCGATGTTCTAGGAAGCTA 219
Query 61 TCAAGCCAGCCATGTGTGAGACAGCTTAACATCAGAAAGGGTCTTGTGTGCAGAGTGATG 120
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct 220 TCAAGCCAGCCATGTGTGAGACAGCTTAACATAAGAAAGAGTCTTGTGTGCAGAGTGATG 279
Query 121 AAGCTGGTCTCTTCCCCTCTTCGGACTTTGCGTGGTGCTGGTAAATCTATTCGAGTGTCA 180
|||||||||||||| |||||| |||||||||||||||||||||||||||| ||||| |||
Sbjct 280 AAGCTGGTCTCTTCACCTCTTAGGACTTTGCGTGGTGCTGGTAAATCTATCCGAGTTTCA 339
Query 181 AAATTCTGCAGTGTCTCCAATGTCTCTTCATTGCAAATTGAACTGGTGCCTTGCCTTAAG 240
|| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 340 AAGTTCTGCAGTGTCTCCAATGTCTCCTCATTGCAAATTGAACTGGTGCCTTGCCTTAAG 399
Query 241 GATAACTATGCTTATATCTTGCATGACGAGGATACTGGTACAGTTGGGGTGGTTGACCCT 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 400 GATAACTATGCTTATATCTTGCATGACGAGGATACTGGTACAGTTGGGGTGGTTGACCCT 459
Query 301 TCTGAAGCTGAACCTGTTATCGATTCGTTGAATAGGAGTGGTCGAAATCTAACATATATA 360
||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 460 TCTGAAGCTGAACCTATTATCGATTCGTTGAAGAGGAGTGGTCGTAATCTAACATATATA 519
Query 361 TTGAATACACATCATCATTATGATCACACTGGTGGGAATTTGGAATTAAAAGACAGGTAC 420
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 520 TTAAATACACATCATCATTATGATCACACTGGTGGGAATTTGGAATTAAAAGACAGGTAC 579
Query 421 GGGGCAAAGGTGATTGGCTCAGCTATGGATAAAGACCGGATTCCTGGAATTGATATAGCA 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 580 GGGGCAAAGGTGATTGGCTCAGCTATGGATAAAGACCGGATTCCTGGAATTGATATGGCC 639
Query 481 TTGAAGGATGGTGACAAATGGATGTTTGCTGGCCATGAAGTCCATGTTATGGATACTCCT 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 640 TTGAAGGATGGTGACAAATGGATGTTTGCTGGCCATGAAGTCCATGTTATGGATACTCCT 699
Query 541 GGCCACACAAAAGGGCATATCAGCTTATACTTTCCACGATCACGAGCGATCTTCACCGGG 600
|||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 700 GGCCACACAAAAGGCCATATCAGCTTATACTTTCCAGGATCACGAGCGATCTTCACCGGG 759
Query 601 GACACGTTGTTTAGCTTATCATGTGGTAAACTCTTCGAAGGCACTCCTAAGCAGATGCTT 660
|||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 760 GACACGATGTTTAGCTTATCATGTGGTAAACTCTTTGAAGGCACTCCTAAGCAGATGCTT 819
Query 661 GCTTCTCTCCAAAAGATCATATCTTTACCAGATGACACAAGCATATACTGTGGTCATGAA 720
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 820 GCTTCTCTCCAAAAGATCACATCTTTACCAGATGACACAAGCATATACTGTGGTCATGAA 879
Query 721 TATACACTGAGTAATTCCAAGTTTGCGTTGTCTCTAGAGCCAAACAACGAAGTACTCCAG 780
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 880 TATACACTGAGTAATTCCAAGTTTGCGTTGTCTCTAGAGCCAAACAACGAAGTACTTCAG 939
Query 781 TCTTATGCAGCTCATGTTGCAGAGCTCCGTAGCAAGAAATTACCTACGATTCCGACAACA 840
|| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 940 TCCTATGCAGCTCATGTTGCAGAGCTCCGAAGCAAGAAATTACCAACGATTCCGACAACA 999
Query 841 CTGAAGATGGAGAAAGCTTGTAACCCCTTCCTCCGCAGTTCAAATACAGATATTCGTCGG 900
||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 1000 GTGAAGATGGAGAAAGCTTGTAACCCCTTCCTCCGCAGCTCAAATACAGATATCCGTCGG 1059
Query 901 GCTTTACGCATTCCAGAGACCGCAGATGAAGCAGAAGCTTTAGGGATTATCCGAAAAGCA 960
|||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct 1060 GCTTTACGCATTCCAGAGGCCGCAGATGAAGCAGAAGCTTTAGGGATTATCCGGAAAGCA 1119
Query 961 AAGGATGATTTCTAA 975
|||||||||||||||
Sbjct 1120 AAGGATGATTTCTAA 1134
> AT1G06130.1 | Symbols: GLX2-4 | glyoxalase 2-4 | chr1:1857767-1860730
REVERSE LENGTH=1353
Length=1353
Score = 1011 bits (547), Expect = 0.0
Identities = 854/998 (86%), Gaps = 37/998 (4%)
Strand=Plus/Plus
Query 1 ATGCAAACCATCTCAAAAGCTTCTTCTGCTATC-TCCTTCTTTCGATGTTCTAGGAAGCT 59
|||||| ||||||| |||| ||||||||| | | || |||||| ||||||||||||||||
Sbjct 91 ATGCAAGCCATCTCCAAAGTTTCTTCTGC-AGCATCATTCTTTAGATGTTCTAGGAAGCT 149
Query 60 A-TCA---AGCC-------A-GCCATGTGTGAGACAGCTTAACATCAGAAAGGGTCTTGT 107
| | | |||| | ||| || |||||||||||| || ||||||||||||||||
Sbjct 150 AGTTAGTCAGCCATGTGTGAGGCCTTGCGTGAGACAGCTTCACGTCAGAAAGGGTCTTGT 209
Query 108 GTGC-AGAGTGATGAAGCTGGTCTCTTCCCCTCTTCGGACTTTGCGTGGTGCTGGTAAAT 166
| | | || ||||||||| ||||||| |||||| |||||||||||| |||||||||||
Sbjct 210 CT-CTGGTGTCATGAAGCTGTTCTCTTCACCTCTTAGGACTTTGCGTGATGCTGGTAAAT 268
Query 167 CTATTCG-AGTGTCAAAATTCTGCAGTGTCTCCAATGTCTC-T--TCATTGCAAATTGAA 222
| |||| | | |||| |||||||||||||||||||||||| | |||||||||||||||
Sbjct 269 CCGTTCGCA-TTTCAAGATTCTGCAGTGTCTCCAATGTCTCTTCCTCATTGCAAATTGAA 327
Query 223 CTGGTGCCTTGCCTTAAGGATAACTATGCTTATATCTTGCATGACGAGGATACTGGTACA 282
|||||||| || |||| ||| ||||||||||||||||| ||||| |||||||| ||||||
Sbjct 328 CTGGTGCCATGTCTTACGGACAACTATGCTTATATCTTACATGATGAGGATACCGGTACA 387
Query 283 GTTGGGGTGGTTGACCCTTCTGAAGCTGAACCTGTTATCGATTCGTTGAATAGGAGTGGT 342
||||| |||||||||||||||||||||| ||||||||| ||| | | | | || | ||
Sbjct 388 GTTGGTGTGGTTGACCCTTCTGAAGCTGTACCTGTTATGGATGCCCTCCAGAAGAATAGT 447
Query 343 CGAAATCTAACATATATATTGAATACACATCATCATTATGATCACACTGGTGGGAATTTG 402
||||||||||| |||||||| ||||||||||| |||||||||||||||||||| ||||||
Sbjct 448 CGAAATCTAACTTATATATTAAATACACATCACCATTATGATCACACTGGTGGCAATTTG 507
Query 403 GAATTAAAAGACAGGTACGGGGCAAAGGTGATTGGCTCAGCTATGGATAAAGACCGGATT 462
||||||||||||||||| || ||||||||||| ||||||||| |||| |||||||||
Sbjct 508 GAATTAAAAGACAGGTATGGTGCAAAGGTGATCGGCTCAGCTGCAGATAGGGACCGGATT 567
Query 463 CCTGGAATTGATATAGCATTGAAGGATGGTGACAAATGGATGTTTGCTGGCCATGAAGTC 522
|||||||||||| |||| ||||| |||| |||||||||||||||||||||||||||||||
Sbjct 568 CCTGGAATTGATGTAGCCTTGAAAGATGCTGACAAATGGATGTTTGCTGGCCATGAAGTC 627
Query 523 CATGTTATGGATACTCCTGGCCACACAAAAGGGCATATCAGCTTATACTTTCCACGATCA 582
||| ||||||| |||||||||||||| | ||| ||||| || || ||||||||| | ||
Sbjct 628 CATATTATGGAAACTCCTGGCCACACCAGAGGCCATATTAGTTTCTACTTTCCAGGGGCA 687
Query 583 CGAGCGATCTTCACCGGGGACACGTTGTTTAGCTTATCATGTGGTAAACTCTTCGAAGGC 642
||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 688 CGAGCAATTTTCACCGGGGACACCTTGTTTAGCTTATCATGTGGTAAACTCTTCGAAGGT 747
Query 643 ACTCCTA-AGCAGATGCTTGCTTCTCTCCAAAAGATCATAT-CTTTACCAGATGACACAA 700
||||| | |||||||||| |||||||| || | ||| || | | || |||||||||||||
Sbjct 748 ACTCC-AGAGCAGATGCTAGCTTCTCTACAGAGGATAAT-TGCGTTGCCAGATGACACAA 805
Query 701 GCATATACTGTGGTCATGAATATACACTGAGTAATTCCAAGTTTGCGTTGTCTCTAGAGC 760
|| |||||||||| |||||||||||||||||||||||||||||||| |||||| |||| |
Sbjct 806 GCGTATACTGTGGCCATGAATATACACTGAGTAATTCCAAGTTTGCATTGTCTATAGAAC 865
Query 761 CAAACAA-CGAAGTACTCCAGTCTTATGCAGC-TCATGTTGCAGAGCTCCGT-AGCAAGA 817
||| ||| |||||| ||||||||||||||||| | | |||||||| |||||| | |||||
Sbjct 866 CAA-CAAACGAAGTGCTCCAGTCTTATGCAGCCT-ACGTTGCAGAACTCCGTGA-CAAGA 922
Query 818 AATTACCTACGATTCCGACAAC-ACTGAAGATGGAGAAAGCTTGTAACCCCTTCCTCCGC 876
||||||| |||||||| || || | ||||||||||||||||||||||||| || ||||||
Sbjct 923 AATTACCAACGATTCCAACGACGA-TGAAGATGGAGAAAGCTTGTAACCCGTTTCTCCGC 981
Query 877 AGTTCA-AATACAGATATTCGTCGGGCTTTACGCATTCCAGAGACCGCAGATGAAGCAGA 935
| | | || |||||||| ||||| |||||| | ||||||||||| ||||||||||||||
Sbjct 982 ACTG-AGAACACAGATATCCGTCGAGCTTTAGGTATTCCAGAGACAGCAGATGAAGCAGA 1040
Query 936 AGCTTTAGGG-ATTATCCGAAAAGCAAAGGATGATTTC 972
|||| | ||| ||||| ||| ||||||||| |||||
Sbjct 1041 AGCTCT-GGGTATTATAAGAAGAGCAAAGGACAATTTC 1077
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 47722439650
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5