BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg320921
Length=1587
Score E
Sequences producing significant alignments: (Bits) Value
AT2G31760.1 | Symbols: ARI10, ATARI10 | RING/U-box superfamily ... 1635 0.0
AT2G31770.1 | Symbols: ARI9, ATARI9 | RING/U-box superfamily pr... 1585 0.0
AT2G31780.1 | Symbols: ATARI11, ARI11 | RING/U-box superfamily ... 1295 0.0
AT1G05890.2 | Symbols: ARI5 | RING/U-box superfamily protein | ... 385 9e-106
AT1G63760.1 | Symbols: ARI6, ATARI6 | pseudogene, ARI protein, ... 283 3e-75
> AT2G31760.1 | Symbols: ARI10, ATARI10 | RING/U-box superfamily
protein | chr2:13508493-13510390 FORWARD LENGTH=1545
Length=1545
Score = 1635 bits (885), Expect = 0.0
Identities = 1384/1611 (86%), Gaps = 90/1611 (6%)
Strand=Plus/Plus
Query 1 ATGGATTATTCAGATGATGACATCATCGATATGGAATCAGGGGAGGAGGAGGATCATTAC 60
||||||||||||||||||||||| ||||||| |||||||||||||| || || | ||
Sbjct 1 ATGGATTATTCAGATGATGACATGATCGATAACGAATCAGGGGAGGA-GA--AT-A--AC 54
Query 61 AGCGA---TGGTGGTAACGAATATGCCGATC-ACTAC-CCTCTTGAAGAAGACGCAATTA 115
||||| ||||||||| | | || || | | ||||| | | || | |||| ||||||
Sbjct 55 AGCGATGGTGGTGGTAATG-A-AT-CCTA-CAACTACAACGC-TGCGGTAGACACAATTA 109
Query 116 TTCCATCTGAGAAAAGTTACGTAG-TTCTCAAGGAAGAAGACATTCACAAGCATCAAAGA 174
||| |||||||||||||||||| | || ||||||||||||| |||| |||| |||||||
Sbjct 110 TTCTATCTGAGAAAAGTTACGT-GATTATCAAGGAAGAAGAGATTCTGAAGCTTCAAAGA 168
Query 175 GACGATATCGAACGAGTTTCCACGGCTCTCTCTCTAAGCCAAGTCGAAGCGACCGTTCTT 234
||||| |||||||||||||||||| ||||| |||||||||||| ||||||| |||||
Sbjct 169 GACGACATCGAACGAGTTTCCACGATTCTCTTTCTAAGCCAAGTGGAAGCGATTGTTCTG 228
Query 235 CTTCTTCATTATCATTGGAGTGTTAGTAAGA-TCTACGAGGAATGGTTTACGGACGAAGA 293
|||||||| ||||||||| |||||||||| | || | || ||||||||||||||||||||
Sbjct 229 CTTCTTCACTATCATTGGTGTGTTAGTAA-ACTCGAAGATGAATGGTTTACGGACGAAGA 287
Query 294 GAGAATCCGTAAAACAGTTGGAATCCTGAAGGAGCCTGTCGTTGACGTTAATGGTAGAGA 353
||||||||||||||| ||||| || | ||||||||||||||||| |||||||||| |||
Sbjct 288 GAGAATCCGTAAAACCGTTGGTATATTAAAGGAGCCTGTCGTTGATGTTAATGGTACAGA 347
Query 354 AGTGGATATCCAATGTGGAATTTGCTTTGAATCATACACTTC-AGATGAAATTGCTACG- 411
||||||||| ||||||||||||||||||||||||||||| || | | |||||||||| |
Sbjct 348 AGTGGATATTCAATGTGGAATTTGCTTTGAATCATACAC-TCGAAAGGAAATTGCTA-GT 405
Query 412 GTTTCTTGTGGTCATCCTTATTGCAAGACTTGCTGGACTGGTTACATCTCTAC-AACAAT 470
||||||||||||||||||||||||||||| |||||||||||||||||| |||| || |||
Sbjct 406 GTTTCTTGTGGTCATCCTTATTGCAAGACCTGCTGGACTGGTTACATCACTACGAA-AAT 464
Query 471 C-AACAACGGTCCAGGATGTTTAAGGGTTAAATGTCCTGAGCCTTCTTGTTCCGCTGCGG 529
| || ||||||| ||||||||||||||||||||||| || |||||||||| ||||| |
Sbjct 465 CGAA-GACGGTCCGGGATGTTTAAGGGTTAAATGTCCCGAACCTTCTTGTTACGCTGTTG 523
Query 530 TTGGTCAAGATATGATCGATAAGGTTAGTAATAAAG-AAGATAAGGAGAAGTACTATAGA 588
|||||||||| ||||||||| |||||| | | ||| |||||||||| ||||| ||||||
Sbjct 524 TTGGTCAAGACATGATCGATGAGGTTACTGA-GAAGAAAGATAAGGACAAGTATTATAGA 582
Query 589 TATTTTCTTAGGTCTTATGTGGAAGAAGTTGGGGAGAGAA-CT-AAATGGTGTCCATCAC 646
|||||||||||||||||||| |||| | |||| |||| | ||||||||||||||||
Sbjct 583 TATTTTCTTAGGTCTTATGTCGAAG-A---CGGGA-AGAAGATGAAATGGTGTCCATCAC 637
Query 647 CGGGATGCGAATGTGCGATAGATTTTAGTGTTGGGAGTGGAAGTGGAAGTAGTAGTTATG 706
||||||||||||| ||| | || | | || | || | | ||||||| |||| |
Sbjct 638 CGGGATGCGAATGCGCG---G--TTGAAT-TT--G-GT-G-A----AAGTAGTGGTTACG 682
Query 707 ATATTTATTGTTTGTGTTCGCATAGCTTTTGCTGGAATTGTACTGAAGATGCTCACAGTC 766
|| || ||||||||||||| |||| |||||||||||||| | |||||||||||||||||
Sbjct 683 ATGTTGCTTGTTTGTGTTCGTATAGGTTTTGCTGGAATTGCAGTGAAGATGCTCACAGTC 742
Query 767 CTGTGGATTGTGACACGGTCTCAAAATGGATATTCAAGAACCAGGATGAGTCCGAGAACA 826
||||||||||||| || || ||||||||||||||||||||||| |||||||| |||||||
Sbjct 743 CTGTGGATTGTGAAACAGTGTCAAAATGGATATTCAAGAACCAAGATGAGTCGGAGAACA 802
Query 827 AGAATTGGATGCTTGCGAATTCAAAGCCTTGTCCTAAATGCAAACGTCCTATCGAGAAGA 886
|||||||||| || |||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct 803 AGAATTGGATACTAGCGAATTCGAAGCCATGTCCTAAATGCAAACGTCCTATCGAGAAGA 862
Query 887 ACGATGGATGTAACCGTATGACATGCTCAG-ATCCATGTAGACATCAG-TTTTGTTGGAT 944
| |||||||||||| |||||||||||||| | | ||| | |||| | |||||||||||
Sbjct 863 GCCATGGATGTAACCATATGACATGCTCAGCGT-CGTGTGGCCATC-GTTTTTGTTGGAT 920
Query 945 TTGTCTTGAACCACATTA-TGGTCACGGTGCTTGCAACAAGTT-CGTTGAGGAGAAGGCT 1002
|||| | || || | || || |||| |||||||||||| || ||||| || | |||
Sbjct 921 TTGTGGTAAATCATA-TAGTGATCACTATGCTTGCAACAA-TTATGTTGA--AG-ATGCT 975
Query 1003 GA--AAG-TAAGAGAACATTGCTTCAGAATGAAATCAAAAGATACACGCATTATTATATA 1059
|| | | |||||||||||||||||||| |||||||||||||||||||||||||||| ||
Sbjct 976 GATCACGATAAGAGAACATTGCTTCAGAGTGAAATCAAAAGATACACGCATTATTATGTA 1035
Query 1060 AGATGGGCA-AACAATCAATCGTCGAGGCTAAAGGCTATGAGTGATCTGGAGAAGTTGCA 1118
||||||| | || ||||||||||||||||| ||||||||||||||||||||||| || ||
Sbjct 1036 AGATGGGTAGAA-AATCAATCGTCGAGGCTTAAGGCTATGAGTGATCTGGAGAAATTCCA 1094
Query 1119 ATCGGTGCAGCTTAAGCAGCTTAGTGATAAACAAAGCAAACCAGAAACTGATCTCCAATT 1178
|||||||||||| |||||||||||||| || || |||||||| ||| ||||||||||||
Sbjct 1095 ATCGGTGCAGCTAAAGCAGCTTAGTGACAATCAGTGCAAACCAAAAATTGATCTCCAATT 1154
Query 1179 CACCT-TAGATGCATGGATTCAGATCCTCGAATGTAGGAGAGTCTTGAAATGGACATATG 1237
|| | ||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct 1155 CA-TTGTAGATGCATGGCTTCAGATCATCGAATGTAGGAGAGTCTTGAAATGGACATATG 1213
Query 1238 CATATGGATACTACCTTCATGATCTCGCCAAGCGACAATT-TTTCGAGTATTTGCAAGGG 1296
||||||||||||||||| || ||||||||||||||| ||| ||| |||||||||||||||
Sbjct 1214 CATATGGATACTACCTTGATAATCTCGCCAAGCGACCATTGTTT-GAGTATTTGCAAGGG 1272
Query 1297 GAGGCTGAAACAAGTTTAGAGAGGCTTCATCATTGTGCAGAGAATGAGTTGAAACAGTTT 1356
|||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 1273 GAGGCTGAAACAGGTTTGGAGAGGCTTCATCATTGTGCAGAGAATGAGTTGAAACAATTT 1332
Query 1357 ATCAATAAAACTGAAGATCCATCCGAAACTTTCTCTGCTTTCCGGATGAAATTAACTAAT 1416
||| ||||| ||||||||||||||| |||||| ||| |||||||||||||||||| |
Sbjct 1333 TTCATTAAAAGTGAAGATCCATCCGATACTTTCAATGCATTCCGGATGAAATTAACTGGT 1392
Query 1417 TTGACTAATGTAACTAAAACCTACTTCGAAAATCTGGTGAAAGCTTTGGAAAATGGTCTT 1476
|||||||| |||||||||||||| ||||| |||||||||||||||||||| |||||||||
Sbjct 1393 TTGACTAAAGTAACTAAAACCTATTTCGATAATCTGGTGAAAGCTTTGGAGAATGGTCTT 1452
Query 1477 GCTGATGTGGCATATAATTATGAGACGACCAAATCAAGCGAAGAATCTGATGATTTTCTC 1536
||||||||| | | | |||||||| |||||||||| ||||||||||
Sbjct 1453 GCTGATGTG--A-------------C--C-AAATCAAGTGAAGAATCTGCTGATTTTCTC 1494
Query 1537 GAAACACAAAAGCTATATGATACTTATATAAGTGAAGGCTACTTCTTCTGA 1587
||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct 1495 GAAACACAAAAGCTATATGATGCTTATATAAGTGAAGGCTGCTTCTTCTGA 1545
> AT2G31770.1 | Symbols: ARI9, ATARI9 | RING/U-box superfamily
protein | chr2:13511579-13513550 FORWARD LENGTH=1632
Length=1632
Score = 1585 bits (858), Expect = 0.0
Identities = 1321/1534 (86%), Gaps = 74/1534 (5%)
Strand=Plus/Plus
Query 1 ATGGA-TTATTCAGATGATGACATCATCGATATGGAATCAGGGGAGGAGGAGGATCATTA 59
||||| || ||||||||||||||| || |||| ||||| || |||||| || ||||
Sbjct 1 ATGGACTT-TTCAGATGATGACATGATTGATAACAAATCA--GG-GGAGGA-GA--ATTA 53
Query 60 CAGC---GATGGTGGTAACGAATATGCCGATCACTACCCTC-TTGAAGAAGACGCAATTA 115
|||| | ||||||||||| | || ||||| |||| | | || | |||| ||||||
Sbjct 54 CAGCTATGGTGGTGGTAACG-A-AT-CCGATGACTA-CAACGATGTGGTAGACACAATTA 109
Query 116 TTCCATCTGAGAAAAGTTACGTAG-TTCTCAAGGAAGAAGACATTCACAAGCATCAAAGA 174
||||||| |||||||||||||| | ||||||||||||||||||||| ||||| |||||||
Sbjct 110 TTCCATCGGAGAAAAGTTACGT-GATTCTCAAGGAAGAAGACATTCTCAAGCTTCAAAGA 168
Query 175 GACGATATCGAACGAGTTTCCA-CGGCTCTCTCTCTAAGCCAAGTCGAAGCGACCGTTCT 233
||||||||||||||||||| || || ||| |||||||||||||| |||| || |||||
Sbjct 169 GACGATATCGAACGAGTTT-CATCGATTCTTTCTCTAAGCCAAGTGGAAGTGATTGTTCT 227
Query 234 TCTTCTTCATTATCATTGGAGTGTTAGT-AAGATCTACGAGGAATGGTTTACGGACGAAG 292
|||||||| ||| | ||| |||||||| ||| || | || |||||||||||||||||||
Sbjct 228 GCTTCTTCACTATAACTGGTGTGTTAGTAAAG-TCGAAGACGAATGGTTTACGGACGAAG 286
Query 293 AGAGAATCCGTAAAACAGTTGGAATCCTGAAGGAGCCTGTCGTTGACGTT-AATGGT--A 349
| |||||||||||| | ||||| | |||||||||||||||||||| || |||||| |
Sbjct 287 AAAGAATCCGTAAAGCCGTTGGTTTATTGAAGGAGCCTGTCGTTGAC-TTCAATGGTGGA 345
Query 350 G----AG------AA-GT------G-G-ATATCCAATGTGGAATTTGCTTTGAATCATAC 390
| || || || | | ||||||||||||||||||||||||||||||||
Sbjct 346 GAAAAAGACAAAAAATGTAGAAAAGTGAATATCCAATGTGGAATTTGCTTTGAATCATAC 405
Query 391 ACTTC-AGATGAAATTGCTACGGTTTCTTGTGGTCATCCTTATTGCAAGACTTGCTGGAC 449
|| || ||| |||||||| | ||||||||||||||||||||||||||||||||||||| |
Sbjct 406 AC-TCGAGAGGAAATTGCAAGGGTTTCTTGTGGTCATCCTTATTGCAAGACTTGCTGGGC 464
Query 450 TGGTTACATCTCTACAACAATC-AACAACGGTCCAGGATGTTTAAGGGTTAAATGTCCTG 508
|||||||||| |||||| |||| || ||||||| |||||||||||||||||||||||||
Sbjct 465 TGGTTACATCACTACAAAAATCGAA-GACGGTCCGGGATGTTTAAGGGTTAAATGTCCTG 523
Query 509 AGCCTTCTTGTTCCGCTGCGGTTGGTCAAGATATGATCGATAAGGTTAGTAATA-AAGAA 567
||||||||||||||||||| |||||| ||||||||||||| | |||| | | | || ||
Sbjct 524 AGCCTTCTTGTTCCGCTGCTGTTGGTAAAGATATGATCGAGGATGTTACTGAGACAA-AA 582
Query 568 GATAAGGAGAAGTACTATAGATATTTTCTTAGGTCTTATGTGGAAGAAGTTGGGGAG-AG 626
| ||| |||||||| | ||||||| |||||||||||||||| ||||| |||| || ||
Sbjct 583 GTTAACGAGAAGTATTCTAGATATATTCTTAGGTCTTATGT---AGAAGATGGGAAGAAG 639
Query 627 AACTAAATGGTGTCCATCACCGGGATGCGAATGTGCGATAGATTTTAGTGTTGGGAGTGG 686
| |||||||||||||||||||||||||| || ||| | || | || | ||||
Sbjct 640 -ATTAAATGGTGTCCATCACCGGGATGCGGATACGCG---G---TT-GAATT-CG-GTGG 689
Query 687 AAGTGGAAGTAGTAGTTATGATATTTATTGTTTGTGTTCGCATAGCTTTTGCTGGAATTG 746
||||| |||||||||||| ||| ||| ||||||||||||| |||| ||||||||||||||
Sbjct 690 AAGTGAAAGTAGTAGTTACGATGTTTCTTGTTTGTGTTCGTATAGGTTTTGCTGGAATTG 749
Query 747 TACTGAAGATGCTCACAGTCCTGTGGATTGTGACACGGTCTCAAAATGGATATTCAAGAA 806
| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 750 CAGTGAAGATGCTCACAGTCCTGTGGATTGTGACACGGTTTCAAAATGGATATTCAAGAA 809
Query 807 CCAGGATGAGTCCGAGAACAAGAATTGGATGCTTGCGAATTCAAAGCCTTGTCCTAAATG 866
|||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 810 CCAGGATGAGTCGGAGAACAAGAATTGGATGCTTGCGAATTCAAAGCCTTGTCCTGAATG 869
Query 867 CAAACGTCCTATCGAGAAGAACGATGGATGTAACCGTATGACATGCTCAGATCCATGTAG 926
||| ||||||||||||||||||||||||||||||| ||||||||| |||| ||| ||| |
Sbjct 870 CAAGCGTCCTATCGAGAAGAACGATGGATGTAACCATATGACATGTTCAGCTCCGTGTGG 929
Query 927 ACATCAGTTTTGTTGGATTTGTCTTGAACCACATTATGGT--CA-CGGTGCTTGCAACAA 983
|||| |||||||||||||||||||| || || || | || || |||||||||||| |
Sbjct 930 ACATGAGTTTTGTTGGATTTGTCTTAAAGCATATCGTCGTCACAGCGGTGCTTGCAATAG 989
Query 984 GTTCGTTGAGGAGAAGGCTGAAAGTAAGAGAACATTGCTTCAGAATGAAATCAAAAGATA 1043
||| |||| |||| |||| |||||||||||| |||||||||||| |||||||||||||||
Sbjct 990 GTTTGTTGTGGAGCAGGCAGAAAGTAAGAGAGCATTGCTTCAGAGTGAAATCAAAAGATA 1049
Query 1044 CACGCATTATTATATAAGATGGGCA-AACAATCAATCGTCGAGGCTAAAGGCTATGAGTG 1102
||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||| |
Sbjct 1050 CACGCATTATTATGTAAGATGGGCAGAA-AATCAATCGTCGAGGCTAAAGGCTATGAGAG 1108
Query 1103 ATCTGGAGAAGTTGCAATCGGTGCAGCTTAAGCAGCTTAGTGATAAACAAAGCAAACCAG 1162
|||||||||||||||||||||||||||||||| |||||||||| || || ||| | |
Sbjct 1109 ATCTGGAGAAGTTGCAATCGGTGCAGCTTAAGGAGCTTAGTGACAATCAGTGCACGTCTG 1168
Query 1163 AAACTGATCTCCAATTCACCTTAGATGCATGGATTCAGATCCTCGAATGTAGGAGAGTCT 1222
||||| | || ||||||||| ||||||||||| |||||||| ||||||||||||||||||
Sbjct 1169 AAACTCAGCTTCAATTCACCGTAGATGCATGGCTTCAGATCATCGAATGTAGGAGAGTCT 1228
Query 1223 TGAAATGGACATATGCATATGGATACTACCTTCATGATCTCGCCAAGCG-ACAATTTTTC 1281
|||||||||||||||||||||||||||||||||| |||||| ||||||| | |||||||
Sbjct 1229 TGAAATGGACATATGCATATGGATACTACCTTCAAGATCTCCCCAAGCGGA-AATTTTTT 1287
Query 1282 GAGTATTTGCAAGGGGAGGCTGAAACAAGTTTAGAGAGGCTTCATCATTGTGCAGAGAAT 1341
|||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||
Sbjct 1288 GAGTATTTGCAAGGGGAGGCTGAATCAGGTTTGGAGAGGCTTCATCATTGTGCAGAGAAT 1347
Query 1342 GAGTTGAAACAGTTTATCAATAAAACTGAAGATCCATCCGAAACTTTCTCTGCTTTCCGG 1401
||||||||||| ||| ||| ||||| ||||||||||||||| |||||| ||||||||||
Sbjct 1348 GAGTTGAAACAATTTTTCATTAAAAGTGAAGATCCATCCGATACTTTCAATGCTTTCCGG 1407
Query 1402 ATGAAATTAACTAATTTGACTA-ATGTAACTAAAACCTACTTCGAAAATCTGGTGAAAGC 1460
|||||||||||| |||||||| | ||||| |||||||||||||||||||||||||||||
Sbjct 1408 ATGAAATTAACTGGTTTGACTACA-GTAACCAAAACCTACTTCGAAAATCTGGTGAAAGC 1466
Query 1461 TTTGGAAAATGGTCTTGCTGATGTGGCATATAAT 1494
|||||| |||||||| | ||||||| || |||||
Sbjct 1467 TTTGGAGAATGGTCTGGTTGATGTGACACATAAT 1500
> AT2G31780.1 | Symbols: ATARI11, ARI11 | RING/U-box superfamily
protein | chr2:13515199-13517413 FORWARD LENGTH=1603
Length=1603
Score = 1295 bits (701), Expect = 0.0
Identities = 1249/1504 (83%), Gaps = 76/1504 (5%)
Strand=Plus/Plus
Query 19 GACATCATCGATATGGAATCAGGGGAGGAGGAGGATCAT-TACAGCGATGGTGGTAACGA 77
|||||||||||||| |||||| ||| ||||||||| | |||||||||||||||||||
Sbjct 73 GACATCATCGATATCGAATCA--GGA-GAGGAGGAT-TTGTACAGCGATGGTGGTAACG- 127
Query 78 ATATGCCGATCACTAC--CCTCTTGAAGAAGACGCAATTATTCCATCTGAGAAAAGTTAC 135
||| ||||| ||||| || | || || ||| |||||| || ||||||||||||||||
Sbjct 128 -TAT-CCGATGACTACAACC-C-TGTGGACGACACAATTAGTCGATCTGAGAAAAGTTAC 183
Query 136 GTAGTTCTCAAGGAAGAAGACATTCACAAGCATCAAAGAGACGATATCGAACGAGTTTCC 195
|| ||| | |||||||||||||||| |||| |||||||||||||||||||| ||||||
Sbjct 184 GTTGTTGTTAAGGAAGAAGACATTCTTAAGCTTCAAAGAGACGATATCGAACAAGTTTCG 243
Query 196 ACGGCTCTCTCTCTAAGCCAAGTCGAAGCGACCGTTCTTCTTCTTCATTATCATTGGAGT 255
|||| ||||||| |||||||||| ||| ||| ||||| |||||||| ||||||||| ||
Sbjct 244 ACGGTTCTCTCTGTAAGCCAAGTGGAATCGATTGTTCTGCTTCTTCACTATCATTGGTGT 303
Query 256 GTTAGTAAGA-TCTACGAGGAATGGTTTACGGACGAAGAGAGAATCCGTAAAACAGTTGG 314
|||||||| | || | || ||||||||||||||||||||||||||||||||||| |||||
Sbjct 304 GTTAGTAA-ACTCGAAGATGAATGGTTTACGGACGAAGAGAGAATCCGTAAAACCGTTGG 362
Query 315 AATCCTGAAGGAGCCTGTCGTTGACGTTAATGGTAGAGAAGTGGATATCCAATGTGGAAT 374
|| | ||||||||||||||||| |||||||||| |||||||||||| |||||||||||
Sbjct 363 TATATTAAAGGAGCCTGTCGTTGATGTTAATGGTACAGAAGTGGATATTCAATGTGGAAT 422
Query 375 TTGCTTTGAATCATACACTTC-AGATGAAATTGCTACGGTTTCTTGTGGTCATCCTTATT 433
||||||||||||||||||| | | | |||||||||| |||||||||||||||||||||||
Sbjct 423 TTGCTTTGAATCATACACT-CGAAAGGAAATTGCTAGGGTTTCTTGTGGTCATCCTTATT 481
Query 434 GCAAGACTTGCTGGACTGGTTACATCTCTAC-AACAATC-AACAACGGTCCAGGATGTTT 491
||||||| |||||||||||||||||| |||| || |||| || | |||||| ||||||||
Sbjct 482 GCAAGACCTGCTGGACTGGTTACATCACTACGAA-AATCGAAGA-CGGTCCGGGATGTTT 539
Query 492 AAGGGTTAAATGTCCTGAGCCTTCTTGTTCCGCTGCGGTTGGTCAAGATATGATCGATAA 551
||||||||||||||| || |||||||||| ||||| ||||||||||| ||||||||| |
Sbjct 540 AAGGGTTAAATGTCCCGAACCTTCTTGTTACGCTGTTGTTGGTCAAGACATGATCGATGA 599
Query 552 GGTTAGTAATAAAGAA-GATAAGGAGAAGTACTATAGATATTTTCTTAGGTCTTATGTGG 610
||||| | | || ||| |||||||| ||||| |||||||||||||||||||||||||| |
Sbjct 600 GGTTACTGAGAA-GAAAGATAAGGACAAGTATTATAGATATTTTCTTAGGTCTTATGTCG 658
Query 611 AAGAAGTTGGGGAGA-GAACTAAATGGTGTCCATCACCGGGATGCGAATGTGCGATAGAT 669
|||| | || ||| || |||||||||||||||||||||||||||| ||| | ||
Sbjct 659 AAGACG--GGA-AGAAGATG-AAATGGTGTCCATCACCGGGATGCGAATACGCGGTTGAA 714
Query 670 TTTAGTGTTGGGAGTGGAAGTGGAAGTAGTAGTTATGATATTTATTGTTTGTGTTCGCAT 729
||| |||| | || ||||||||||||||| ||| ||| ||||||||||||| ||
Sbjct 715 TTTGGTGT----A----AA-TGGAAGTAGTAGTTACGATGTTTCTTGTTTGTGTTCGTAT 765
Query 730 A-GCTTTTGCTGGAATTG-TACTGAAGATGCTCACAGTCCTGTGGATTGTGACACGGTCT 787
| | |||||||||||||| | |||||| |||||| ||||||||||||||| || || |
Sbjct 766 AAG-TTTTGCTGGAATTGCTG-TGAAGACGCTCACTCTCCTGTGGATTGTGAAACAGTGT 823
Query 788 CAAAATGGATATTCAAGAACCAGGATGAGTCCGAGAACAAGAATTGGATGCTTGCGAATT 847
|||| ||| || | |||||| |||||||||| ||||||| ||||||||| ||||| ||
Sbjct 824 CAAAGTGGTTACTAAAGAACAAGGATGAGTCGGAGAACATGAATTGGATACTTGCTAAGA 883
Query 848 CAAAGCCTTGTCCTAAATGCAAACGTCCTATCGAGAAGAACGA-TGGATGTAACCGTATG 906
|||||||||||||||||||||| |||||||| ||||||||| | ||||||||||| ||||
Sbjct 884 CAAAGCCTTGTCCTAAATGCAAGCGTCCTATTGAGAAGAAC-ACTGGATGTAACCATATG 942
Query 907 ACATGCTCAGATCCATGTAGACATCAGTTTTGTTGGATTTGTCTTGAACCACATT-ATG- 964
||||||||| ||||||||||||| | ||||||||| || ||| ||||| || | |
Sbjct 943 TCATGCTCAGCTCCATGTAGACATTATTTTTGTTGGGCATGCCTTCAACCA--TTGA-GC 999
Query 965 G-TCACG-GTGCTTGCAACAAGTTCGTTGAGGAGA-A--G-GC-TGAAAGTAAGAGAACA 1017
| |||| | ||||||||| ||| | || ||| | | | ||||| |||||||| |
Sbjct 1000 GATCACAAG-GCTTGCAACGCGTT--TAAAGCAGACAATGAGGATGAAACTAAGAGAAAA 1056
Query 1018 TTG-CTTCAGAATGAAATCAAAAGATACACGCATTATTAT-ATAAGATGGGCAAACAATC 1075
| || ||| || ||| | ||||||||||||| |||| | |||||||||| |||||
Sbjct 1057 AGGGCTAAAGA-TGCGATCGATAGATACACGCATTTTTATGA-AAGATGGGCATTCAATC 1114
Query 1076 AATCGTCGAGGCT-AAAGGCTATGAGTGATCTGGAGAAGTTGCAATCGGTGCAGCTTAAG 1134
|||| |||||||| |||| ||||||||||| ||||||| | |||||||||| ||||||||
Sbjct 1115 AATCCTCGAGGCTTAAAG-CTATGAGTGATTTGGAGAAATGGCAATCGGTGGAGCTTAAG 1173
Query 1135 CAGCTTAGTGATAAACAAAGCAAACCAGAAACTGATCTCCAATT-CACCTTAGATGCATG 1193
||||||||||| | || |||| |||||||||| | ||| | || |||| ||||||||||
Sbjct 1174 CAGCTTAGTGACATTCAGAGCACACCAGAAACTCAGCTC-AGTTTCACCGTAGATGCATG 1232
Query 1194 GATTCAGATCCTCGAATGTAGGAGAGTCTTGAAATGGACATATGCATATGGATACTACCT 1253
| |||||||| |||| |||||||| |||||||||||||| |||||||||||||||||| |
Sbjct 1233 GCTTCAGATCATCGAGTGTAGGAGGGTCTTGAAATGGACCTATGCATATGGATACTACAT 1292
Query 1254 TCAT-GATCTCGCCAAGCGACAATTTTTCGAGTATTTGCAAGGGGAGGCTGAAACAAG-T 1311
| | | || | | ||| ||| |||||||||||||| ||||| |||| | | |
Sbjct 1293 ACTTAG-TCAAG--A-GCG-CAACAAG-CGAGTATTTGCAAGCTGAGGCAGAAA-ATGGT 1345
Query 1312 TTAGAGAGGCTTCATCATTGTGCAGAGAATGAGTTGAAACAGTTTATCAATAAAACTGAA 1371
|| ||||| |||||||||||||||||| | |||||||||||||||||| |||| ||||
Sbjct 1346 TTGGAGAGACTTCATCATTGTGCAGAGGAGGAGTTGAAACAGTTTATCGGGAAAATTGAA 1405
Query 1372 GATCCATCCGAAACTTTCTCTGCTTTCCG-GATGAAATTAACTAATTTGACTAATGTAAC 1430
|| ||||| ||| |||| || |||| | |||||||| | |||||||||| | |||
Sbjct 1406 GACCCATCAAAAAATTTCGGTGAGCTCCGAGC-GAAATTAATTGATTTGACTAAAGCAAC 1464
Query 1431 TAAAACCTACTTCGAAAATCTGGTGAAAGCTTTGGAAAATGGTCTTGCTGATGTGGCATA 1490
|||||||||||||||||||||||||||||||||||| || ||||||| ||| ||||||||
Sbjct 1465 TAAAACCTACTTCGAAAATCTGGTGAAAGCTTTGGAGAACGGTCTTGTTGACGTGGCATA 1524
Query 1491 TAAT 1494
||||
Sbjct 1525 TAAT 1528
> AT1G05890.2 | Symbols: ARI5 | RING/U-box superfamily protein
| chr1:1779256-1784427 FORWARD LENGTH=2421
Length=2421
Score = 385 bits (208), Expect = 9e-106
Identities = 646/848 (76%), Gaps = 67/848 (8%)
Strand=Plus/Plus
Query 132 TTACGTAGTTCTCAAGGAAGAAGACATTCACAAGCATCA-AAGAGACGATATCGAACGAG 190
||| || ||||||||||||||||| |||| || |||||| || || ||| | | ||||
Sbjct 663 TTATGTTGTTCTCAAGGAAGAAGATATTCGCAGGCATCAGAA-CGATGATGTTGGGCGAG 721
Query 191 TTTCCACGGCT-CTCTCTC-TAAGCC-AAGTCGAAGCGACCGTTC-TT-CTTCTTCATTA 245
||||| ||| | ||||| | ||| || | |||||||| | || | || |||||||| ||
Sbjct 722 TTTCCGCGG-TCCTCTC-CATAA-CCGATGTCGAAGC-A-AGTACTTTGCTTCTTCACTA 776
Query 246 TCATTGGAGTGTTAGT-AAGATCT-ACGAGGAATGGTTTACGGACGAAGAGAGAATCCGT 303
||| |||||||| ||| ||| | | | || ||||||||| |||| || |||||| | ||
Sbjct 777 TCACTGGAGTGTCAGTAAAG-T-TAATGATGAATGGTTTGCGGATGAGGAGAGAGTTCGC 834
Query 304 AAAACAGTTGGAATCCT-GAAGGAGCCTGTCGTTGACGTTA-ATGGTAGAGAAGTGGATA 361
| ||| ||||| || | || ||| ||||| ||| || | || | | | || | ||
Sbjct 835 AGAACTGTTGGCATATTAGAGGGA-CCTGTTGTT-ACAACACCTGAT-G-GCAGAGAATT 890
Query 362 TCCAATGTGGAATTTGCTTTGAATCATACACTTC-AGATGAAATTGCTA-CGGTTTCTTG 419
| | ||||||||| |||||||| || ||||| || || ||||||| || ||||||||||
Sbjct 891 TAC-ATGTGGAATATGCTTTGATTCCTACAC-TCTTGAGGAAATTG-TATCGGTTTCTTG 947
Query 420 TGGTCATCCTTAT-TGCAAGACTTGCTGGACTGGTTACAT-CTCTACAACAATCAACAAC 477
||||||||||| | ||| || || ||||| ||||| || | ||||| ||||| |
Sbjct 948 TGGTCATCCTT-TCTGCGCTACATGTTGGACAGGTTATATAAGC-ACAACCATCAATGAT 1005
Query 478 GGTCCAGGATGTTTAAGGGTTAAATGTCCTGAGCCTTCTTGTTCC-GCTGCGGTTGGTCA 536
|| ||||| ||||| | | | |||||||| || |||||||| ||| ||||| ||||||
Sbjct 1006 GGCCCAGGCTGTTTGATGCTAAAATGTCCCGACCCTTCTTG-TCCTGCTGCTATTGGTCG 1064
Query 537 AGATATGATCGATAAGGTTAG-TAATAAAGAAGATAAGGAGAAGTACTATAGATATTTTC 595
||||||||||||||| ||| | | ||| ||||| ||||||||||| |||||||||||||
Sbjct 1065 AGATATGATCGATAA-GTTGGCTTCTAAGGAAGACAAGGAGAAGTATTATAGATATTTTC 1123
Query 596 TTAGGTCTTATGTGGAAGAAGTTGGGGAGAGA-ACT-AAATGGTGTCCAT-CACCGGGAT 652
|||| |||||||| |||| | ||||| | | || |||||||| | | || ||||
Sbjct 1124 TTAGATCTTATGT---CGAAG-TCAACAGAGAGA-TGAAGTGGTGTCC-TGCCCCAGGAT 1177
Query 653 GCGAATGTGCGATAGATTTTAGTGTTGGGAGTGGAAGTGGAAGTAGTAGTTATGATATTT 712
| ||| ||| || || ||| || | | |||| | | | | ||||||||| |||
Sbjct 1178 GTGAACATGCAATTGA-TTT--TGCT--G-GTGGGA-CCG-A--A--AGTTATGATGTTT 1225
Query 713 ATTGTTTGTGTTCGCATAGCTTTTGCTGGAATTGTACTGAAGATGCTCACAGTCCTGTGG 772
|| ||||||||||||||||||||||||||||| |||||||| |||||| |||||||||
Sbjct 1226 CGTGCTTGTGTTCGCATAGCTTTTGCTGGAATTGCACTGAAGAGGCTCACCGTCCTGTGG 1285
Query 773 ATTGTGACACGGTCTC-AAAATGGATATTCAAGAACCAG-GATGAGTCCGAGAACAAGAA 830
|||||||||| || | |||||||||| | |||||| || | ||| || || || | |||
Sbjct 1286 ATTGTGACACAGT-TGGAAAATGGATACTAAAGAAC-AGCGCTGAATCTGAAAATATGAA 1343
Query 831 TTGGATGCTTGCGAATTCAAAGCCTTGTCCTAAA-TGCAAACGTCCTATCGAGAAGAA-C 888
|||||| ||||| ||||||||||||||||| ||| || || || || || || ||||| |
Sbjct 1344 TTGGATACTTGCCAATTCAAAGCCTTGTCC-AAAGTGTAAGCGGCCAATTGAAAAGAATC 1402
Query 889 GATGGATGTAACCGTATGACATGCTCAG-ATCCATGTAGACATCAGTTTTGTTGGATTTG 947
|||| |||| | ||||||||| || | || |||| | | ||||||||||| ||||
Sbjct 1403 -ATGGCTGTATGCACATGACATGCACACCA-CCTTGTAAATTTGAGTTTTGTTGGCTTTG 1460
Query 948 TCTTGAAC 955
||| |||
Sbjct 1461 CCTT-AAC 1467
Score = 209 bits (113), Expect = 6e-53
Identities = 350/461 (76%), Gaps = 29/461 (6%)
Strand=Plus/Plus
Query 1039 AGATACACGCATTATTATATAA-GATGGGCAAACAATCAA-TCGTCGAGGCTAAAGGCTA 1096
|||||||| ||||| ||| || | ||||||| ||||||| | |||||||| ||| ||||
Sbjct 1594 AGATACACTCATTACTAT-GAACGCTGGGCAAGCAATCAAGT-GTCGAGGCAAAAAGCTA 1651
Query 1097 TGAGTGATCTGGAGAAGTTGCAATCGGTGCAGCTTAAGCAGCTTAGTGATAAACAAAGCA 1156
|| | |||||| |||| ||||||| | | ||||| | |||||||||| | || |||
Sbjct 1652 TGGGGGATCTGCAGAAAATGCAATCAGAGAAGCTTGGGAAGCTTAGTGACATTCAGTGCA 1711
Query 1157 AACCAGAAACTGATCTCCAA-TTCACCTTAGATGCATGGATTCAGATCCTCGAATGTAGG 1215
||||||| || | || ||| || | | ||| || ||| | |||||| | ||||| | |
Sbjct 1712 CACCAGAATCTCAGCT-CAAGTTTATCGCAGAGGCTTGGCTCCAGATCATTGAATGCA-G 1769
Query 1216 A-GAGT-CTTGAAATGGACATATGCATATGGATACTACCTTCATGATC-TCGCCAAGCGA 1272
| | || | |||||||||||||||||||||||||||| || || |||| | || ||| |
Sbjct 1770 ACGGGTAC-TGAAATGGACATATGCATATGGATACTATCTACAAGATCAT-GCTAAGAAA 1827
Query 1273 CAATTTTTCGAGTATTTGCAAGGGGAGGCTGAAACAAGTTTAGAGAGGCTTCATCAT-TG 1331
| |||||| ||||||||||||||||||||||| || |||| |||||||| || || ||
Sbjct 1828 CCATTTTTTGAGTATTTGCAAGGGGAGGCTGAGTCAGGTTTGGAGAGGCTCCA-CAAATG 1886
Query 1332 TGCAGAGAATGAGTTGAAACAG-T-TTATCAA-TAAAACTGAAGATCCATCCGA--AACT 1386
| |||||| || | | | || | || | || | |||| | || || || || |
Sbjct 1887 CGTAGAGAAGGA-T--ATAGAGGTGTT-TGAACTTG--CTGAGGGCCCTTCAGAGGAA-T 1939
Query 1387 TTCTCTGC-TTTCCGGATGAAATTAACTAATTTGACTAATGTAACTAAAACCTACTTCGA 1445
| | | | |||||||| ||||||||| ||| || | |||| ||||||| ||| ||
Sbjct 1940 T-CAAT-CATTTCCGGACAAAATTAACTGGTTTAACCAGCATAACAAAAACCTTCTTTGA 1997
Query 1446 AAATCTGGTGAAAGCTTTGGAAAATGGTCTTGCTGATGTGG 1486
|||||||||||||||| |||| |||||||||||||||||||
Sbjct 1998 AAATCTGGTGAAAGCTCTGGAGAATGGTCTTGCTGATGTGG 2038
> AT1G63760.1 | Symbols: ARI6, ATARI6 | pseudogene, ARI protein,
similar to ARI protein (A Drosophila RING Finger Motif Involved
in Axonal Path-finding in the Central Nervous System)
GB:CAA66953 (Drosophila melanogaster); blastp match of 86% identity
and 5.3e-235 P-value to GP|6850317|gb|AAF29394.1|AC009999_14|AC009999
Contains similarity to Ariadne-2 protein from
Drosophila melanogaster gb|AJ010169 and contains an IBR
PF|01485 and a zf-C3HC4 (RING finger) PF|00097 domain. ESTs
gb|AA585849, gb|T42014 come from this gene. -TRUNCATED- | chr1:23655713-23657612
FORWARD LENGTH=1900
Length=1900
Score = 283 bits (153), Expect = 3e-75
Identities = 645/868 (74%), Gaps = 91/868 (10%)
Strand=Plus/Plus
Query 121 TCTGAGA-AAAGTTACGTAGTTCTCAAGGAAGAAGACATTCACAAGCATCA-AA-GA-GA 176
||| ||| ||| ||| || ||||||||||||||||| |||| || |||||| || || ||
Sbjct 163 TCTCAGATAAA-TTATGTTGTTCTCAAGGAAGAAGATATTCGCAGGCATCAGAAGGATGA 221
Query 177 CGATATCGAACGAGTTTCC-ACGGCTCTCTCTC-TAAGCC-AAGTCGAAGCGACCGT-TC 232
|| | | | ||||||||| | | ||||| | ||| || | ||| |||| | || |
Sbjct 222 CG-T-T-GGGCGAGTTTCCGTTGTC-CTCTC-CATAA-CCGATGTCCAAGC-A-AGTCTT 273
Query 233 TT-CTTCTTCATTATCATTGGAGTGTTAGT-AAGATCT-ACGAGGAATGGTTTACGGACG 289
|| |||||||| ||||| |||||||| ||| ||| | | | || ||||||||| |||| |
Sbjct 274 TTGCTTCTTCACTATCACTGGAGTGTCAGTAAAG-T-TAATGATGAATGGTTTGCGGATG 331
Query 290 AAGAGAGAATCCGTAAAACAGTTGGAATCCT-GAAGGAGCCTGTCGTTGACGTTAATGGT 348
| || ||| | |||| ||| ||||| || | || ||| |||| | || | ||||
Sbjct 332 AGGACAGAGTTCGTAGAACTGTTGGCATATTAGAGGGA-CCTG-C----AC-CTGATGGC 384
Query 349 AGAGAAGTGGATATCCAATGTGGAATTTGCTTTGAATCATACACTTC-AGATGAAATTGC 407
|||| ||| | | | ||||||||| ||||||||||| ||| | || || |||| |
Sbjct 385 AGAG-AGT---T-TAC-ATGTGGAATATGCTTTGAATCCTAC-CCTCTTGAGGAAACT-A 436
Query 408 TA-CGGTTTCTTGTGGTCATCC-TTATTGCAAGACTTGCTGGACTGGTTACAT-CTCTAC 464
|| |||||||||||||||| || || ||| || || ||||| ||||| || | ||
Sbjct 437 TATCGGTTTCTTGTGGTCACCCATT-CTGCGCTACATGTTGGACGGGTTATATAAGC-AC 494
Query 465 AA-CAATCAACAACGGTCCAGGATGTTTAAGGGTTAAATGT-CCTGAGCCTTCTTGTTCC 522
|| | ||||| | || ||||||||||| | | | |||||| ||| | |||| ||| |||
Sbjct 495 AAGC-ATCAATGATGGCCCAGGATGTTTGATGCTAAAATGTCCCT-ACCCTTGTTG-TCC 551
Query 523 -GCTGCGGTTGGTCAAGATATGATCGATAAGGTTAGTAAT--AAAGAAGATAAGGAGAAG 579
|| || |||||| ||||||||||||||| || || | || ||||| ||| ||| |
Sbjct 552 TGCGGCCATTGGTCGAGATATGATCGATAA-CTT-GTGTTCCAAGGAAGACAAGTAGAGG 609
Query 580 TACTATAGATATTTTCTTAGGTCTTATGTGGAAGAAGTTGGGGAGAGA-ACT-AAATGGT 637
|| |||||||||||||||||||||||||| |||| | ||||| | | || || |
Sbjct 610 TATTATAGATATTTTCTTAGGTCTTATGT---TGAAG-TCAACAGAGAGA-TGAAGTGCT 664
Query 638 GTCCAT-CACCGGGATGCGAATGTGCGA-TAGATTTTAG-TGTTGGGAGTGGAAGTGGAA 694
|||| | | || ||||| || ||| | ||| |||| | || ||||| | | ||
Sbjct 665 GTCC-TGCCCCAGGATGTGAGCATGCAATTAG-TTTT-GCTGCTGGGA-CCG-A----AA 715
Query 695 GTAGTAGTTATGATATTTATTGTTTGTGTTCGCATAGCTTTTGCTGGAATTGTACTGAAG 754
||| | ||||||| ||| || ||||||||||||||||||||||||||||| | |||||
Sbjct 716 GTA--A-TTATGATGTTTCGTGCTTGTGTTCGCATAGCTTTTGCTGGAATTGCAGTGAAG 772
Query 755 ATGCTCACAGTCCTGTGGATTGTGACACGGTCTC-AAAATGGATATTCAAGAACCAGGA- 812
| |||||| ||||||||||||||||||| || | |||||||||| | |||||| || |
Sbjct 773 AGGCTCACCGTCCTGTGGATTGTGACACAGT-TGGAAAATGGATACTAAAGAAC-AGCAC 830
Query 813 TGAGTCCGAGAACAAGAATTGGATGCTTGCGAATTCAAAGCCTTGTCCTAAA-TGCAA-A 870
||| || || || | ||||||||| ||||| ||||| ||||||||||| ||| || || |
Sbjct 831 TGAATCTGAAAATATGAATTGGATACTTGCCAATTCGAAGCCTTGTCC-AAAGTGTAAGA 889
Query 871 CGTCCTATCGAGAAGAA-CGATGGATGTAACCGTATGACATGCTCAG-ATCCATGTAGAC 928
| || || || ||||| | ||||||||| | ||||||||| || | || |||| |
Sbjct 890 GG-CCAATAGAAAAGAATC-ATGGATGTATGCACATGACATGCACACCA-CCTTGTA-AG 945
Query 929 ATC-AGTTTTGTTGGATTTGTCTTGAAC 955
| ||||||||||| | || ||| |||
Sbjct 946 TTTGAGTTTTGTTGGCTCTGCCTT-AAC 972
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 78363050745
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5