BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg321144
Length=2598
Score E
Sequences producing significant alignments: (Bits) Value
AT1G29370.1 | Symbols: | Kinase-related protein of unknown fun... 1273 0.0
AT1G29350.1 | Symbols: | Kinase-related protein of unknown fun... 1273 0.0
> AT1G29370.1 | Symbols: | Kinase-related protein of unknown function
(DUF1296) | chr1:10277890-10283198 REVERSE LENGTH=2860
Length=2860
Score = 1273 bits (689), Expect = 0.0
Identities = 1738/2223 (78%), Gaps = 158/2223 (7%)
Strand=Plus/Plus
Query 67 GATATTCCGTCAGGGTCGAAG-AAGATGGTTCAAAGTTTGAAAGAAATTGTAAACTGC-C 124
||||||||||||||||| || || || || ||||| |||| ||||||||||||| | |
Sbjct 220 GATATTCCGTCAGGGTC-TAGAAAAATAGTACAAAGCTTGACGGAAATTGTAAACT-CTC 277
Query 125 CTGAGGCAGAGATCTATGCCGTGCTCAAGGACTGTAACATGGATCCTAATGAAGCCGTCA 184
||||||| ||||||||||| |||| || || || || ||||||||||| ||| |||| |
Sbjct 278 CTGAGGCTGAGATCTATGCTATGCTTAAAGAGTGCAATATGGATCCTAACGAAACCGTTA 337
Query 185 GTCGCCTCCTCTCCCAAGATCCTTTTCACGAGGTGAAGAGCaaaaaagaaaagaagaaag 244
||||||||||||| |||||||| ||||||||||| |||||||| ||||||||||||||||
Sbjct 338 GTCGCCTCCTCTCTCAAGATCCATTTCACGAGGTAAAGAGCAAGAAAGAAAAGAAGAAAG 397
Query 245 aGATTAGGGATATACCGGATTC-CCGCCGACG-AG-GCTATAGTAACAATTACAACCGTG 301
||| |||||||||| | ||||| | |||| || | |||| | ||||| ||||||||||
Sbjct 398 AGACTAGGGATATATCAGATTCTCGGCCG-CGTGGTGCTA-A-TAACACCTACAACCGTG 454
Query 302 G-GATTAGAGGTGTTTCTGATCGTTATGCTGGACGAAATGGAGCCACCCCTTTCAGCTCT 360
| | |||||||| ||||| ||| || || ||||||| |||| | |||| ||||||||||
Sbjct 455 GTG-CTAGAGGTGGTTCTGCTCGCTACGCCGGACGAAGTGGATCTACCCATTTCAGCTCT 513
Query 361 AGTGACTCAGGAAGCTTCCAAGGAAAAACTACAAACAAGAGGGAGAGCGGGATGCAGACT 420
| ||| || |||| |||||| |||||| ||||||| |||| || || || | |||| |
Sbjct 514 ACTGATTCTGGAAACTTCCAGGGAAAATCTACAAATAAGAAAGAAAGTGGAACGCAGGGT 573
Query 421 CATGCAGGTTCTTATTCTTCTACGTCTGGCGTATCGAGCCACC-ATCAGATACCACACAG 479
|| || |||||| |||||| | ||||| || ||| |||| |||| | |||||||||
Sbjct 574 TATACAAGTTCTTGGTCTTCTGCTTCTGGAGTGGCGA-ACACCTATCAAACACCACACAG 632
Query 480 TGATTCTGTTGCTAAAGAAAGTAAAACGCCAACTGTTACCTCGGGTGGTGAAATATCATC 539
||| | ||||||| |||| ||| ||| ||||||||| ||| | || |||||||||
Sbjct 633 TGAACCCGTTGCTACGGAAAACAAATTGCCTCCTGTTACCTTGGGAGATGGAATATCATC 692
Query 540 ATCAC-TTTATG-TTACTGGACATCAAACTGCATGGTTTGGAGCTTCAGGTCAGCTGTCT 597
||||| | | | || ||||||||||||||||||||||||||||| |||| ||| ||||
Sbjct 693 ATCACAGTCA-GCTT-CTGGACATCAAACTGCATGGTTTGGAGCTCCAGGCCAGAGGTCT 750
Query 598 ATGGCTGACA-TTGTGAAGATGGGTAGACCTCATAACAAGACAACAAACTCTCAGAAAAA 656
|||||||| | ||||||||||||||||||| || |||||||||||||| | | |||
Sbjct 751 ATGGCTGA-AGTTGTGAAGATGGGTAGACCACAGAACAAGACAACAAAG-C--A-AAA-- 803
Query 657 TGTCGATATGCGTTCTGAGGTAAATCACGAGCATGAAAAT--GCTGCAAATCAACATGTA 714
|||| ||||| |||||||| ||||||| || || ||| | | ||||||||| || |
Sbjct 804 TGTCAATATGGGTTCTGAGATAAATCATGAACAC-AAAGTTAG-TGCAAATCATCAGGCC 861
Query 715 CCTGTGAAAGATGAATGGCCCTCGATGGAGAAGCCAG-TGGCTGCTAGCACTTCTTCTGT 773
||||| |||||||||||||| ||||| |||||||| | ||||| |||| || |||||| |
Sbjct 862 CCTGTTAAAGATGAATGGCCGTCGATTGAGAAGCC-GCTGGCTCCTAGTACATCTTCTTT 920
Query 774 ATCAGTAGCACCAACTGAGTCAGA-GATATGCAATAGTCCAGCAGATTTCCAATCC-AGT 831
||||||||||||| | || ||||| | || ||||| ||||||| |||||||||||| | |
Sbjct 921 ATCAGTAGCACCAGCAGAATCAGAAG-TACGCAATGGTCCAGCTGATTTCCAATCCGA-T 978
Query 832 AGAAGAGATCAACATCCGAAGGGCCAGTTGGAAGACACACATTTAAAAGAAAATGGTCCC 891
||| |||||||| ||| ||||| || ||| ||| | | ||| || ||||| ||| |||
Sbjct 979 AGAGGAGATCAATATCTGAAGGACCGGTTAGAAAATATTCATATAGCAGAAAGTGG-CCC 1037
Query 892 TT-TGGGAA-TCTTGGAAGA--GATCATGTGCAGCCTGACACTGTAGCTGGTGGAGCTGT 947
|| || || || | ||| ||||||||||| | | | | | || ||||
Sbjct 1038 TTCTGA-AAGTCGT--AAGGTTGATCATGTGCAA---G-C-C-G-A-CT-------CTGT 1079
Query 948 TCAGGAAGATGACTCTGGAGTGTCATCTGAGTAT-GATGATAATCCTTACAGATACCAAA 1006
||| |||||||| |||| ||| || || || || ||||||||||| || | | | |
Sbjct 1080 TCAAGAAGATGAATCTGTAGTTTCGTCAGAA-ATTGATGATAATCCATA----T-C-AGA 1132
Query 1007 CACAGAAAAACCCTGTTGAGCCCC-CGAAAGATGAAGACGAAGTTTTGTCTG-TTGCTGC 1064
|||||| | || || |||| || | ||||||||||| || |||| |||| || | ||
Sbjct 1133 CACAGAGCCATCCAGTAGAGCACCAC-AAAGATGAAGATGATGTTTCATCTGGTT-CAGC 1190
Query 1065 CAACCTTCAAGA-CTTGAGCATAGAGAACCATGATCAATAC-TCCTCTCATGATGATGAT 1122
|| ||||| | || || |||| | |||||||| | || || ||||| | |||
Sbjct 1191 CAGTTTTCAACAACT--AG-ATAGT---C-ATGATCAAGAAGTC-TCACATGAAAAGGAT 1242
Query 1123 AGACCTGCTGTCGTGATTCCAGATCATCTGCAAATTCATACAGAAGAGTGCTCACAGTTA 1182
||||||||||| || |||||| | ||| ||| |||||| |||||||| ||| | || |||
Sbjct 1243 AGACCTGCTGTTGTAATTCCAAACCATTTGCTAATTCACACAGAAGAATGCGCGCAATTA 1302
Query 1183 AGCTTTGGAAGTTTTGGAGGCTTTGGATCAAGGCCTTTGAGCAACAGCTTAGAAGAGGCT 1242
|| |||||||| |||||||| ||||||||||||||||||||||||||| |||||| | ||
Sbjct 1303 AGTTTTGGAAGCTTTGGAGGTTTTGGATCAAGGCCTTTGAGCAACAGCGTAGAAGCGACT 1362
Query 1243 TCTGATGTAGCTCCACAGATTGAACGTACTGATGCTAGAAATTCGGAGTTCTATGGAGAT 1302
||||||||||||||||| || |||| | | ||||| |||||| | |||||||||||||||
Sbjct 1363 TCTGATGTAGCTCCACAAATCGAACATTCAGATGCAAGAAATACTGAGTTCTATGGAGAT 1422
Query 1303 GAACATCTAGGAAGCATGTCCAATGGGCATATGGTCCATGCGTCTACTGCTG-ACAATTA 1361
|||||||| ||||| | ||||||| |||||||||| | || || ||| | |||||
Sbjct 1423 GAACATCTGGGAAGTACAACCAATGGAAATATGGTCCACACACCTGCTACTGGA-AATTA 1481
Query 1362 TGATGATTCTTCAGAATATC-AG-CGAGAGGTTTTGTTGCCAGAAAACCCTGAAACCGCT 1419
||||||||||| |||| | | || |||||||| ||| || ||||||| |||| ||||
Sbjct 1482 TGATGATTCTTTAGAA-A-CGAGGCGAGAGGTGTTGAAGCAAGAAAACTCTGAGGGCGCT 1539
Query 1420 CATCAGGAGAACCATTACTCGTTTGCTCAGTCGGATCCAGATTATGCATATGAAAATACC 1479
|| |||| |||| ||| | ||| | ||||| || | || ||||| ||||||||| |
Sbjct 1540 CA---GGAGCACCAGTACACATTTACCCAGTCTGAGCAAGGGTATGCGTATGAAAATGCT 1596
Query 1480 AAGCAGCAGCTGGAT-AAT---GCATTTGATGCCTCACAGACAAGCATG-ACTA-AA-CA 1532
|||||||||| | || ||| |||| |||||||||||| |||| || || | || ||
Sbjct 1597 AAGCAGCAGCAG-ATGAATTCTGCATATGATGCCTCACACACAA--ATTCAC-AGAATCA 1652
Query 1533 GATGCAGCATCTTGCTTCATTAACAAATGTGATGCAAGGGTATTCAAACTCAATTCCAAA 1592
|||||| |||||| ||||||| ||||||||||||| ||||||||| ||||| |||| ||
Sbjct 1653 GATGCATAATCTTGATTCATTATCAAATGTGATGCAGGGGTATTCACACTCAGTTCCCAA 1712
Query 1593 CACTCTATTGGCACAGACAGCACAGAGTGCAAGGGAGCTTGAACTTC-AGTATTC-CTCT 1650
|||| |||||||||| |||||||| | ||| ||||| ||||| |||| ||||||| | ||
Sbjct 1713 CACTTTATTGGCACAAACAGCACAAAATGCGAGGGAACTTGA-CTTCCAGTATTCAC-CT 1770
Query 1651 TTCCCAGGCGT-A-CAGTCTATGCCGTCAAGAA---GCAACGATACC--A-CACTAGGTG 1702
||| ||| | | | |||||||||| ||||||| ||||| || || | |||| ||||
Sbjct 1771 TTCTCAG-C-TCAACAGTCTATGCAATCAAGAACTAGCAACAATGCCTCATCACTTGGTG 1828
Query 1703 GCCAAAGCATTTCCATGCCAGAGGCACTCAGAGGTGGTGG--TGCTGTTGCAACAACCCA 1760
||||||||||||| ||||||||||| ||| |||| |||| | | | |||||| | |
Sbjct 1829 GCCAAAGCATTTCAATGCCAGAGGCGCTCCGAGGCAGTGGAATTCCG--GCAACA-C--A 1883
Query 1761 GTCAAGCCAGCAGA-ACTTACCCGGTGCCAATATTGCAACTGGACCAGCAATTCCTCAGC 1819
| ||| |||||| | ||| ||| ||||| ||||| || |||||||| || |||||||||
Sbjct 1884 GCCAACCCAGCAAACACT-ACCTGGTGCTAATATCGCTACTGGACCTGCTCTTCCTCAGC 1942
Query 1820 AGATTGCAATGCATCCATACTCTCAACCCACATTGCCTCTGACTCACTATCCCAACATGA 1879
|| || |||||||| ||||||||||||||||| ||||| || |||||| | |||||||
Sbjct 1943 AGCTTCCAATGCAT---TACTCTCAACCCACATTACCTCTAACACACTATGCAAACATGA 1999
Query 1880 TCAGTTATCCTTTGATGCCTCAGAGCTACCCTTACATTCCATC-GACTTTCCAGCAAGCA 1938
|| |||||||| | |||||||||| || || ||||| ||||| | ||||||||||| ||
Sbjct 2000 TCGGTTATCCTCTAATGCCTCAGAATTATCCATACATGCCATCTG-CTTTCCAGCAAACA 2058
Query 1939 TTTGCTGGTAACAACT-CATACCACCAGTCA-CTTGCTGC-TCTGCTTCCACATTATAAA 1995
||||||||||| | | ||||||||||| || || ||||| | ||||||| || || |||
Sbjct 2059 TTTGCTGGTAATAG-TGCATACCACCAG-CAACTAGCTGCAT-TGCTTCCGCAGTACAAA 2115
Query 1996 AACAACA-CT-TCCGCCAGTAATTTGCCTCAGTCAGCAACTTCCCCTGCTTCCTCCTCTG 2053
| ||| || ||| | |||||||||||||||| ||||| | ||||| | || | |
Sbjct 2116 ACCAATGTCTCTCC-CG-GTAATTTGCCTCAGTCTGCAACAGCGCCTGC--C-TC-T--G 2167
Query 2054 CCTATGGGGTTGGGAACTCGAGCAATGTTGAA---GCCGGAAACTTCCTTCTTAACCAAC 2110
| ||||| |||| ||||||| |||||| | | ||||||||||||| |||||||||||
Sbjct 2168 CTTATGGATTTGGAAACTCGACCAATGTCGGATCTGCCGGAAACTTCCCTCTTAACCAAC 2227
Query 2111 AACATGTCGCTCCTACTGGGGCAACATTTAGTTATGAAGACGCCCTGAGT-CTACAATAC 2169
| | | ||| |||| || |||| || ||||||| || | || ||| || ||||||
Sbjct 2228 AG--TCT-GCTACTACCGGTACAACGCTTGGTTATGACGATGTTCTTAGTTCT-CAATAC 2283
Query 2170 AAACAGAACAACTATCTATTGT-ATCTTcagcagcagcagcatcaacaacagcagcaaca 2228
||| |||| | |||| ||| | ||||||||||||||||| ||||| || || |||||
Sbjct 2284 AAAGAGAAT--C-ATCTGTTGGCA-CTTCAGCAGCAGCAGCAACAACAGCAACATCAACA 2339
Query 2229 aca 2231
|||
Sbjct 2340 ACA 2342
Score = 99.0 bits (53), Expect = 2e-19
Identities = 96/116 (83%), Gaps = 6/116 (5%)
Strand=Plus/Plus
Query 2269 cagcagcagcaacaacaacaacaacaacaacaGAATGAAAACTTTCCTATGTGGCTA-AA 2327
||||||||||||||||| ||||| ||||||||||| ||||||| | ||||||| | |
Sbjct 2311 CAGCAGCAGCAACAACAGCAACATCAACAACAGAACGAAAACTCGGCGATGTGGC-ATCA 2369
Query 2328 TGGACCTGGCTCTCA-AACCATGTCGGGTGTCCCGAGC-AACACATATTACAACCT 2381
|| | ||| || || ||||||||| |||||||||| | ||||| |||||||||||
Sbjct 2370 GGGTCATGGTTC-CAGAACCATGTCAGGTGTCCCGA-CTAACACGTATTACAACCT 2423
> AT1G29350.1 | Symbols: | Kinase-related protein of unknown function
(DUF1296) | chr1:10268469-10273788 REVERSE LENGTH=2963
Length=2963
Score = 1273 bits (689), Expect = 0.0
Identities = 1735/2220 (78%), Gaps = 152/2220 (7%)
Strand=Plus/Plus
Query 67 GATATTCCGTCAGGGTCGAAG-AAGATGGTTCAAAGTTTGAAAGAAATTGTAAACTGC-C 124
||||||||||||||||| || || || || ||||| |||| ||||||||||||| | |
Sbjct 221 GATATTCCGTCAGGGTC-TAGAAAAATAGTACAAAGCTTGACGGAAATTGTAAACT-CTC 278
Query 125 CTGAGGCAGAGATCTATGCCGTGCTCAAGGACTGTAACATGGATCCTAATGAAGCCGTCA 184
||||||| ||||||||||| |||| || || || || ||||||||||| ||| |||| |
Sbjct 279 CTGAGGCTGAGATCTATGCTATGCTTAAAGAGTGCAATATGGATCCTAACGAAACCGTTA 338
Query 185 GTCGCCTCCTCTCCCAAGATCCTTTTCACGAGGTGAAGAGCaaaaaagaaaagaagaaag 244
||||||||||||| |||||||| ||||||||||| |||||||| ||||||||||||||||
Sbjct 339 GTCGCCTCCTCTCTCAAGATCCATTTCACGAGGTAAAGAGCAAGAAAGAAAAGAAGAAAG 398
Query 245 aGATTAGGGATATACCGGATTC-CCGCCGACG-AG-GCTATAGTAACAATTACAACCGTG 301
||| |||||||||| | ||||| | |||| || | |||| | ||||| ||||||||||
Sbjct 399 AGACTAGGGATATATCAGATTCTCGGCCG-CGTGGTGCTA-A-TAACACCTACAACCGTG 455
Query 302 G-GATTAGAGGTGTTTCTGATCGTTATGCTGGACGAAATGGAGCCACCCCTTTCAGCTCT 360
| | |||||||| ||||| |||||| || ||||||| |||| | |||| ||||||||||
Sbjct 456 GTG-CTAGAGGTGGTTCTGCTCGTTACGCCGGACGAAGTGGATCTACCCATTTCAGCTCT 514
Query 361 AGTGACTCAGGAAGCTTCCAAGGAAAAACTACAAACAAGAGGGAGAGCGGGATGCAGACT 420
| ||| || |||| |||||| |||||| ||||||| |||| || || || | |||| |
Sbjct 515 ACTGATTCTGGAAACTTCCAGGGAAAATCTACAAATAAGAAAGAAAGTGGAACGCAGGGT 574
Query 421 CATGCAGGTTCTTATTCTTCTACGTCTGGCGTATCGAGCCACC-ATCAGATACCACACAG 479
|| || |||||| |||||| | ||||| || ||| |||| |||| | |||||||||
Sbjct 575 TATACAAGTTCTTGGTCTTCTGCTTCTGGAGTGGCGA-ACACCTATCAAACACCACACAG 633
Query 480 TGATTCTGTTGCTAAAGAAAGTAAAACGCCAACTGTTACCTCGGGTGGTGAAATATCATC 539
||| | |||||| |||| ||| ||| ||||||||| ||| | || |||||||||
Sbjct 634 TGAACCCATTGCTATGGAAAACAAATTGCCTCCTGTTACCTTGGGAGATGGAATATCATC 693
Query 540 ATC-ACTTTATG-TTACTGGACATCAAACTGCATGGTTTGGAGCTTCAGGTCAGCTGTCT 597
||| | | | | || ||||||||||||||||||||||||||||| |||| ||| ||||
Sbjct 694 ATCAAAGTCA-GCTT-CTGGACATCAAACTGCATGGTTTGGAGCTCCAGGCCAGAGGTCT 751
Query 598 ATGGCTGACA-TTGTGAAGATGGGTAGACCTCATAACAAGACAACAAACTCTCAGAAAAA 656
|||||||| | ||||||||||||||||||| || |||||||||||||| | | |||
Sbjct 752 ATGGCTGA-AGTTGTGAAGATGGGTAGACCACAGAACAAGACAACAAAG-C--A-AAA-- 804
Query 657 TGTCGATATGCGTTCTGAGGTAAATCACGAGCATGAAAATGCTGCAAATCAACATGTACC 716
|||| || || |||||||| ||||||| || || ||| | ||||||||| || | ||
Sbjct 805 TGTCAATGTGGGTTCTGAGATAAATCATGAACACGAAGTTAATGCAAATCAGCAGGCCCC 864
Query 717 TGTGAAAGATGAATGGCCCTCGATGGAGAAGCCAG-TGGCTGCTAGCACTTCTTCTGTAT 775
||| |||||||||||||| ||||| |||||||| | ||||| |||| || |||||| |||
Sbjct 865 TGTTAAAGATGAATGGCCGTCGATTGAGAAGCC-GCTGGCTCCTAGTACATCTTCTTTAT 923
Query 776 CAGTAGCACCAACTGAGTCAGA-GATATGCAATAGTCCAGCAGATTTCCAATCC-AGTAG 833
||||||||||| | || ||||| | || ||||| ||| ||| |||||||||||| | |||
Sbjct 924 CAGTAGCACCAGCAGAATCAGAAG-TACGCAATGGTCTAGCTGATTTCCAATCCGA-TAG 981
Query 834 AAGAGATCAACATCCGAAGGGCCAGTTGGAAGACACACATTTAAAAGAAAATGGTCCCTT 893
| |||||||| ||| ||||| || ||| ||| | | ||| || ||||| ||| ||| |
Sbjct 982 AGGAGATCAATATCTGAAGGACCGGTTAGAAAATATTCATATAGCAGAAAGTGG-CCCGT 1040
Query 894 -TGGGAA-TCTTGGAAGA-GATCATGTGCAGCCTGACACTGTAGCTGGTGGAGCTGTTCA 950
|| || || ||| | ||||||||||| | | | | | || |||||||
Sbjct 1041 CTGA-AAGTCGTGGG-GTCGATCATGTGCAA---G-C-C-G-A-CT-------CTGTTCA 1083
Query 951 GGAAGATGACTCTGGAGTGTCATCTGAGTAT-GATGATAATCCTTACAGATACCAAACAC 1009
|||||||| |||| ||| || || || || ||||||||||| || | | | ||||
Sbjct 1084 AGAAGATGAATCTGTAGTTTCGTCAGAA-ATTGATGATAATCCATA----T-C-AGACAC 1136
Query 1010 AGAAAAACCCTGTTGAGCCCC-CGAAAGATGAAGACGAAGTTTTGTCTG-TTGCTGCCAA 1067
||| | || || |||| || | ||||||||||| || |||| |||| || | ||||
Sbjct 1137 AGAGCCATCCAGTAGAGCACCAC-AAAGATGAAGATGATGTTTCATCTGGTT-CAGCCAG 1194
Query 1068 CCTTCAAGA-CTTGAGCATAGAGAACCATGATCAATAC-TCCTCTCATGATGATGATAGA 1125
||||| | || || |||| | |||||||| | || || ||||| || ||||||
Sbjct 1195 TTTTCAACAACT--AG-ATAGT---C-ATGATCAAGAAGTC-TCACATGAAGAGGATAGA 1246
Query 1126 CCTGCTGTCGTGATTCCAGATCATCTGCAAATTCATACAGAAGAGTGCTCACAGTTAAGC 1185
|||||||| || |||||| | ||| ||| |||||| |||||||| ||| | || |||||
Sbjct 1247 CCTGCTGTTGTAATTCCAAACCATTTGCTAATTCACACAGAAGAATGCGCGCAATTAAGT 1306
Query 1186 TTTGGAAGTTTTGGAGGCTTTGGATCAAGGCCTTTGAGCAACAGCTTAGAAGAGGCTTCT 1245
|||||||| |||||||| ||||||||||||||||||||||||||| |||||| | |||||
Sbjct 1307 TTTGGAAGCTTTGGAGGTTTTGGATCAAGGCCTTTGAGCAACAGCGTAGAAGCGACTTCT 1366
Query 1246 GATGTAGCTCCACAGATTGAACGTACTGATGCTAGAAATTCGGAGTTCTATGGAGATGAA 1305
|||||||||||||| || |||| | | ||||| |||||| | ||||||||||||||||||
Sbjct 1367 GATGTAGCTCCACAAATCGAACATTCAGATGCAAGAAATACTGAGTTCTATGGAGATGAA 1426
Query 1306 CATCTAGGAAGCATGTCCAATGGGCATATGGTCCATGCGTCTACTGCTG-ACAATTATGA 1364
||||| ||||| | ||||||| |||||||||| | || || ||| | ||||||||
Sbjct 1427 CATCTGGGAAGTACAACCAATGGAAATATGGTCCACACACCTGCTACTGGA-AATTATGA 1485
Query 1365 TGATTCTTCAGAATATC-AG-CGAGAGGTTTTGTTGCCAGAAAACCCTGAAACCGCTCAT 1422
|||||||| |||| | | || |||||||| ||| || ||||||| |||| ||||||
Sbjct 1486 TGATTCTTTAGAA-A-CGAGGCGAGAGGTGTTGAAGCAAGAAAACTCTGAGGGCGCTCA- 1542
Query 1423 CAGGAGAACCATTACTCGTTTGCTCAGTCGGATCCAGATTATGCATATGAAAATACCAAG 1482
|||| |||| ||| | ||| | ||||| || | || ||||| ||||||||| | |||
Sbjct 1543 --GGAGCACCAGTACACATTTACCCAGTCTGAGCAAGGGTATGCGTATGAAAATGCTAAG 1600
Query 1483 CAGCAGCTGGAT-AAT---GCATTTGATGCCTCACAGACAAGCATG-ACTA-AA-CAGAT 1535
||||||| | || ||| |||| |||||||||||| |||| || || | || |||||
Sbjct 1601 CAGCAGCAG-ATGAATTCTGCATATGATGCCTCACACACAA--ATTCAC-AGAATCAGAT 1656
Query 1536 GCAGCATCTTGCTTCATTAACAAATGTGATGCAAGGGTATTCAAACTCAATTCCAAACAC 1595
||| |||||| ||||||| ||||||||||||| ||||||||| ||||| |||| |||||
Sbjct 1657 GCATAATCTTGATTCATTATCAAATGTGATGCAGGGGTATTCACACTCAGTTCCCAACAC 1716
Query 1596 TCTATTGGCACAGACAGCACAGAGTGCAAGGGAGCTTGAACTTC-AGTATTC-CTCTTTC 1653
| |||||||||| |||||||| | ||| ||||| ||||| |||| ||||||| | |||||
Sbjct 1717 TTTATTGGCACAAACAGCACAAAATGCGAGGGAACTTGA-CTTCCAGTATTCAC-CTTTC 1774
Query 1654 CCAGGCGT-A-CAGTCTATGCCGTCAAGAA---GCAACGATACC--A-CACTAGGTGGCC 1705
||| | | | |||||||||| ||||||| ||||| || || | |||| |||||||
Sbjct 1775 TCAG-C-TCAACAGTCTATGCAATCAAGAACTAGCAACAATGCCTCATCACTTGGTGGCC 1832
Query 1706 AAAGCATTTCCATGCCAGAGGCACTCAGAGGTGGTGG--TGCTGTTGCAACAACCCAGTC 1763
|||||||||| ||||||||||| ||| |||| |||| | | | |||||| | || |
Sbjct 1833 AAAGCATTTCAATGCCAGAGGCGCTCCGAGGCAGTGGAATTCCG--GCAACA-C--AGCC 1887
Query 1764 AAGCCAGCAGA-ACTTACCCGGTGCCAATATTGCAACTGGACCAGCAATTCCTCAGCAGA 1822
|| |||||| | ||| ||| ||||| ||||| || |||||||| || |||||||||||
Sbjct 1888 AACCCAGCAAACACT-ACCTGGTGCTAATATCGCTACTGGACCTGCTCTTCCTCAGCAGC 1946
Query 1823 TTGCAATGCATCCATACTCTCAACCCACATTGCCTCTGACTCACTATCCCAACATGATCA 1882
|| |||||||| ||||||||||||||||| ||||| || |||||| | |||||||||
Sbjct 1947 TTCCAATGCAT---TACTCTCAACCCACATTACCTCTAACACACTATGCAAACATGATCG 2003
Query 1883 GTTATCCTTTGATGCCTCAGAGCTACCCTTACATTCCATC-GACTTTCCAGCAAGCATTT 1941
|||||||| | |||||||||| || || ||||| ||||| | ||||||||||| |||||
Sbjct 2004 GTTATCCTCTAATGCCTCAGAATTATCCATACATGCCATCTG-CTTTCCAGCAAACATTT 2062
Query 1942 GCTGGTAACAACT-CATACCACCAGTCA-CTTGCTGC-TCTGCTTCCACATTATAAAAAC 1998
|||||||| | | ||||||||||| || || ||||| | ||||||| || || |||| |
Sbjct 2063 GCTGGTAATAG-TGCATACCACCAG-CAACTAGCTGCAT-TGCTTCCGCAGTACAAAACC 2119
Query 1999 AACA-CT-TCCGCCAGTAATTTGCCTCAGTCAGCAACTTCCCCTGCTTCCTCCTCTGCCT 2056
|| || ||| | |||||||||||||||| ||||| | ||||| | || | || |
Sbjct 2120 AATGTCTCTCC-CG-GTAATTTGCCTCAGTCTGCAACAGCGCCTGC--C-TC-T--GCTT 2171
Query 2057 ATGGGGTTGGGAACTCGAGCAATGTTGAA---GCCGGAAACTTCCTTCTTAACCAACAAC 2113
|||| |||| ||||||| |||||| | | ||||||||||||| ||||||||||||
Sbjct 2172 ATGGATTTGGAAACTCGACCAATGTCGGATCTGCCGGAAACTTCCCTCTTAACCAACAG- 2230
Query 2114 ATGTCGCTCCTACTGGGGCAACATTTAGTTATGAAGACGCCCTGAGT-CTACAATACAAA 2172
| | ||| |||| || |||| || |||||||||| | || ||| || |||||||||
Sbjct 2231 -TCT-GCTACTACCGGTACAACGCTTGGTTATGAAGATGTTCTTAGTTCT-CAATACAAA 2287
Query 2173 CAGAACAACTATCTATTGT-ATCTTcagcagcagcagcatcaacaacagcagcaacaaca 2231
|||| | |||| ||| | ||||||||||||||||| ||||| || || ||||||||
Sbjct 2288 GAGAAT--C-ATCTGTTGGCA-CTTCAGCAGCAGCAGCAACAACAGCAACATCAACAACA 2343
Score = 99.0 bits (53), Expect = 2e-19
Identities = 96/116 (83%), Gaps = 6/116 (5%)
Strand=Plus/Plus
Query 2269 cagcagcagcaacaacaacaacaacaacaacaGAATGAAAACTTTCCTATGTGGCTA-AA 2327
||||||||||||||||| ||||| ||||||||||| ||||||| | ||||||| | |
Sbjct 2312 CAGCAGCAGCAACAACAGCAACATCAACAACAGAACGAAAACTCGGCGATGTGGC-ATCA 2370
Query 2328 TGGACCTGGCTCTCA-AACCATGTCGGGTGTCCCGAGC-AACACATATTACAACCT 2381
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Sbjct 2371 GGGTCATGGTTC-CAGAACCATGTCAGGTGTCCCGA-CTAACACGTATTACAACCT 2424
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 128979210453
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5