BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg321210
Length=1860
Score E
Sequences producing significant alignments: (Bits) Value
AT2G34940.1 | Symbols: VSR5, VSR3;2, BP80-3;2 | VACUOLAR SORTIN... 2752 0.0
AT1G30900.1 | Symbols: VSR6, VSR3;3, BP80-3;3 | VACUOLAR SORTIN... 1426 0.0
AT4G20110.2 | Symbols: VSR7 | VACUOLAR SORTING RECEPTOR 7 | chr... 488 7e-137
> AT2G34940.1 | Symbols: VSR5, VSR3;2, BP80-3;2 | VACUOLAR SORTING
RECEPTOR 5 | chr2:14740468-14743417 FORWARD LENGTH=1989
Length=1989
Score = 2752 bits (1490), Expect = 0.0
Identities = 1741/1862 (94%), Gaps = 17/1862 (1%)
Strand=Plus/Plus
Query 1 ATGTCTACGAGCAATAAAGGAACCGTCTTGGCTCTGATACTAGCGTTGACCATGGTGGTG 60
|||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 30 ATGTCTCCGAGCAATAAAGGAACCGTCTTGGCTCTGATTCTAGCGTTGACCATGGTGGTG 89
Query 61 GTCAAC-GGTGTTTCACCGAGATTCTTCGTGGAGAAGAGTAGCTTGACGGTACTTAACTC 119
|||||| ||| ||||| ||||||||||||||||||| || ||||||||||| ||||||||
Sbjct 90 GTCAACGGGT-TTTCATCGAGATTCTTCGTGGAGAAAAGCAGCTTGACGGTCCTTAACTC 148
Query 120 TTGGAAAATGGGAGCTAAGCACGACGCGGCCATCGCAAACTTTGG-CATTCCAAACTTCG 178
||| |||||||||||||||||||||||||||| ||||||||||| | | ||||| | ||
Sbjct 149 ATGGGAAATGGGAGCTAAGCACGACGCGGCCATAGCAAACTTTGGTC-TCCCAAAGTACG 207
Query 179 GTGGTTTCATGATCGGCTCTGTCGTCTACGCAGGCCAAGGCGATTATGGATGCGACTCTT 238
| |||||||||||||||||||| |||||||||||||||| || ||| |||||| ||||||
Sbjct 208 GCGGTTTCATGATCGGCTCTGTGGTCTACGCAGGCCAAGACGCTTACGGATGCAACTCTT 267
Query 239 TCAACAAAACCTTCACTCCCAAGTCTCCTTATCCCACCATCCTCCTCATTGATCGTGGAG 298
||||||||||||||| | |||||||||||||||||| || |||||||||||||||||||
Sbjct 268 TCAACAAAACCTTCAATACCAAGTCTCCTTATCCCAAAATTCTCCTCATTGATCGTGGAG 327
Query 299 TGTGTAACTTTGCTTTGAAGATATGGAATGGGCAACAATCCGGAGCAGCGGCTGTTCTTT 358
|||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||
Sbjct 328 TGTGTAACTTTGCTTTGAAGATATGGAACGGACAACAATCCGGCGCAGCGGCTGTTCTTT 387
Query 359 TAGCAGATAACATTGTTGAGCCATTGTTAACAATGGATTCACCAGAGGAATCCCAAGATA 418
|||||||||||||||||||||||||| |||||||||| | | | | ||||||||
Sbjct 388 TAGCAGATAACATTGTTGAGCCATTGATAACAATGGA-T-A-C------ACCCCAAGATG 438
Query 419 AAGATCCTGACTTTATAGACAAAATCAAGATCCCATCGGCTTTGATCCTTCGCTCTTTCG 478
||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||
Sbjct 439 AAGATCCTGACTTTATAGACAAAGTCAAGATCCCATCAGCTTTAATCCTTCGCTCTTTCG 498
Query 479 GTGATAGCCTCAAGAATGCTCTTAAAAGAGGCGAGGAAGTAATCTTGAAGATTGATTGGA 538
|||||||||||||||| |||||||||||||| ||||| |||||||||||||| |||||||
Sbjct 499 GTGATAGCCTCAAGAAAGCTCTTAAAAGAGGTGAGGAGGTAATCTTGAAGATGGATTGGA 558
Query 539 GTGAGTCTATACCAAACCCTGATGAGAGAGTTGAGTATGAGCTATGGGCTAACACTAACG 598
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 559 GTGAGTCTATACCAAACCCTGATGAGAGAGTTGAGTATGAGCTATGGGCTAATACTAATG 618
Query 599 ATAAATGTGGTGTGCACTGCCATAAGCA-ATTAGATTTCATAAAGAACTTTAAGGGAACG 657
|| |||||||||| |||||| |||| || | |||||||||| |||||||||||||||| |
Sbjct 619 ATGAATGTGGTGTACACTGCGATAAACAGA-TAGATTTCATTAAGAACTTTAAGGGAATG 677
Query 658 GCTCAGATTCTTGAAAAAGGTGGTTATACTTTGTTCAGACCTCATTACATTGCTTGGTTT 717
|||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||| ||
Sbjct 678 GCTCAGATTCTTGAAAAAGGCGGTTATACTTTGTTCAGACCTCACTACATTTCTTGGGTT 737
Query 718 TGTCCCAAAGAGCTGCTGCTTAGCAAGCAGTGTAAGACTCAGTGTCTAAACCAAGGGAGG 777
|||||||||||||| || |||||||||||||||| |||||||||| ||||||||||||||
Sbjct 738 TGTCCCAAAGAGCTTCTACTTAGCAAGCAGTGTAGGACTCAGTGTATAAACCAAGGGAGG 797
Query 778 TATTGTGCTCCTGACCCTAAGCAAGACTTTGAAGATGGATATAATGGGAAAGACGTCGTT 837
|||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct 798 TATTGTGCTCTTGATACTAAGCAAGAATTTGAAGATGGATATAATGGGAAAGACGTCGTT 857
Query 838 TACGAGAATCTGAGACAGTTATGTGTTCATAGAGTAGCTAAGGAGAAGAACACTTCTTGG 897
|| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 858 TATGAGAATCTGAGGCAGTTATGTGTTCATAAAGTAGCTAAGGAGAAGAACACTTCTTGG 917
Query 898 GTTTGGTGGGATTATGTGACAGATTTTAACATCAGGTGTTCTATGAAGGAGAAGAAATAC 957
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 918 GTTTGGTGGGACTATGTGACAGATTTTAACATCAGGTGTTCTATGAAGGAGAAGAAATAC 977
Query 958 AGCAGAGAATGCGCAGAGACTGTCGTGGAATCTCTCGGGTTGTCTCTTGAGAAGATCAAG 1017
||||||||||| ||||||||| | ||||||||||||||| ||||||||||||||||||||
Sbjct 978 AGCAGAGAATGTGCAGAGACTATTGTGGAATCTCTCGGGCTGTCTCTTGAGAAGATCAAG 1037
Query 1018 AAATGCATTGGTGATCCTGATGCTGATGTAGAGAATGAAGTTCTAAAAGCCGAACAAGCT 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1038 AAATGCATTGGTGATCCTGATGCTGATGTAGAGAATGAAGTTCTAAAAGCCGAGGAAGCT 1097
Query 1078 TTTCAGTTAGGCCAAGAGAATCGCGGGGTTGTTACAATCTTTCCAACATTGATGATCAAC 1137
||||||||||||||||||||||| || |||||||||||||||| ||||| |||||||||
Sbjct 1098 TTTCAGTTAGGCCAAGAGAATCGTGGCATTGTTACAATCTTTCCTACATTAATGATCAAC 1157
Query 1138 AATGCTCAATATCGCGGTAAACTGGAGAGAACTGCGGTGCTGAAGGCTATATGTTCAGGA 1197
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1158 AATGCTCAATATCGCGGTAAACTGGAGAGAACCGCGGTGCTGAAGGCTATATGTTCAGGA 1217
Query 1198 TTCAAGGAAAGAACCGAACCTTCAATATGTTTGAATGCAGATATAGAGACCAATGAATGT 1257
|||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct 1218 TTCAAGGAAAGAACAGAACCGTCAATATGTTTGAATTCAGATATAGAGACCAATGAATGT 1277
Query 1258 CTTATAGAAAATGGAGGATGTTGGCAAGACAAAAGATCTAATGTAACGGCTTGCAAGGAC 1317
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 1278 CTTATAGAAAATGGAGGATGTTGGCAAGACAAAAGATCCAATGTAACTGCTTGCAAGGAC 1337
Query 1318 ACATTTAGGGGAAGAGTATGTGAGTGCCCGGTTTTTAATGGGGTTCAATATAAAGGAGAT 1377
||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||
Sbjct 1338 ACATTTAGGGGAAGAGTATGTGAGTGCCCGGTTGTCGATGGTGTTCAATATAAAGGAGAT 1397
Query 1378 GGTTATACCTCCTGCAAACCTTATGGACCTGCTAGATGTTCA-TCGAACAATGGAGGCTG 1436
|||||||||||||||||||||||||||||||| ||||||||| | ||||||||||| |||
Sbjct 1398 GGTTATACCTCCTGCAAACCTTATGGACCTGCGAGATGTTCAAT-GAACAATGGAGACTG 1456
Query 1437 CTGGTCTGAAACCAGAACGGGTCTAACTTTCTCTGCTTGTTCAAACTCAGAGACATCAGG 1496
||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||
Sbjct 1457 CTGGTCTGAAACCAGAAAGGGTCTAACTTTCTCTTCTTGTTCAGACTCAGAGACATCAGG 1516
Query 1497 ATGTCGTTGTCCTCTAGGCTTCCGTGGAGATGGTCTGAAATGTGAAGACATCGATGAATG 1556
||||||||| |||||||| |||| |||||||||||| |||||||||||||| ||||||||
Sbjct 1517 ATGTCGTTGCCCTCTAGGTTTCCTTGGAGATGGTCTAAAATGTGAAGACATTGATGAATG 1576
Query 1557 CAAAGAGAAATCAGCTTGTCAATGTGATGACTGCAAATGCAAGAACAATTGGGGAGGATA 1616
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct 1577 CAAAGAGAAATCAGCTTGTAAATGTGATGGCTGCAAATGCAAGAACAATTGGGGAGGATA 1636
Query 1617 TGAATGCAAATGTTCTAACAATAGTGTCTATATGAAAGAAGAAGACACTTGTATTGAGAG 1676
||||||||||||||||||||||||| |||| ||||||||||| ||||||||||| |||||
Sbjct 1637 TGAATGCAAATGTTCTAACAATAGTATCTACATGAAAGAAGAGGACACTTGTATCGAGAG 1696
Query 1677 AAGAAGTGGATCAAGAAGCAGATGGTTGTTCACAATTGTGGTTCTAATCGCCATTGCGGG 1736
|||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||
Sbjct 1697 AAGAAGTGGATCAAGAAGCAGAGGGTTGTTCACAATTGTGGTTCTAACCGCCATCGCGGG 1756
Query 1737 TATCTCTTTAGGTGCTTATATATTCTACAAGTACCATCTTCAGTCTTACATGGATTCAGA 1796
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1757 TATCTCTTTAGGTGCTTATATATTCTACAAGTACCATCTTCAGTCATACATGGATTCAGA 1816
Query 1797 GATAGTGTGTATTATGTCTCAGTACATACCACTCGATAGCCAAAGCATTAACCAAGACTC 1856
||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1817 GATCGTGTCCATTATGTCTCAGTACATACCACTCGATAGCCAAAGCATTAACCAAGACTC 1876
Query 1857 TT 1858
||
Sbjct 1877 TT 1878
> AT1G30900.1 | Symbols: VSR6, VSR3;3, BP80-3;3 | VACUOLAR SORTING
RECEPTOR 6 | chr1:10997275-11000543 FORWARD LENGTH=1896
Length=1896
Score = 1426 bits (772), Expect = 0.0
Identities = 1514/1864 (81%), Gaps = 83/1864 (4%)
Strand=Plus/Plus
Query 14 ATAAAGGAACCGTCTTGGCTCTGATACTAGCGTTGACCATGGTGGTGGTCAACGGTG-TT 72
|||||||| || |||||||||| | |||||||||| | | ||||||||||||| | ||
Sbjct 14 ATAAAGGAGCCACCTTGGCTCTGTTTCTAGCGTTGA-C-T-ATGGTGGTCAACGGAGTTT 70
Query 73 TCACCGAGATTCTTCGTGGAGAAGAGTAGCTTGACGGTACTTAACTC-TTGGAAAATG-G 130
|| ||||||| |||| |||||||||||| ||||| | || ||| | |||| |||| |
Sbjct 71 TC-GGGAGATTCATCGTTGAGAAGAGTAGCGTGACGATTCTAAACCCTTTGG-CAATGCG 128
Query 131 GAGCTAAGCACGACGCGGCCATCGCAAACTTTGGCATTCCAAACTTCGGTGGTTTCATGA 190
| ||||||||||||| ||||| || ||||| || |||| |||| |||||||| |||||
Sbjct 129 G-TCTAAGCACGACGCAGCCATTGCTAACTTCGGTGTTCCTAACTACGGTGGTTACATGA 187
Query 191 TCGGCTCTGTCGTCTACGCAGGCCAAGGCGATTATGGATGCGACTCTTTCAACAAAACCT 250
||||||| ||||| ||||| || ||||| | ||||||||| |||||||| ||||||| |
Sbjct 188 TCGGCTCCGTCGTTTACGCCGGTCAAGGAGCTTATGGATGTGACTCTTTTGACAAAACTT 247
Query 251 TCACTCCC-AAGTCTCCTTATCCCACCATCCTCCTCATTGATCGTGGAGTGTGTAACTTT 309
||| ||| || || ||| ||| ||||| | |||| |||||||||| |||| |||||
Sbjct 248 TCAAACCCAAATTC-CCTCGTCCTACCATTTTGATCATCGATCGTGGAGAGTGTTACTTT 306
Query 310 GCTTTGAAGATATGGAATGGGCAACAATCCGGAGCAGCGGCTGTTCTT-TTAGCAGATAA 368
|| || ||| ||||||| || ||||||||||| | ||| || ||| || |||| |||||
Sbjct 307 GCATTAAAGGTATGGAACGGTCAACAATCCGGTGTAGCAGCAGTT-TTAGTAGCTGATAA 365
Query 369 CATTGTTGAGCCATTGTTAACAATGGATTCACCAGAGGAATCCCAAGATAAAGATCCTGA 428
| | | |||||||||| |||||||||||||||| ||||||| |||| | ||| | |||
Sbjct 366 CGTCGATGAGCCATTGATAACAATGGATTCACCTGAGGAAT-CCAA-A-GAAGCTGATGA 422
Query 429 CTTTATAGACAAAATCAAGATCCCATCGGCTTTGAT--CCTTCGCTCTTTCGGTGATAGC 486
||||||||| ||| |||| || ||||||||||| || ||| ||||||| ||| |
Sbjct 423 CTTTATAGAGAAACTCAACATTCCATCGGCTTTAATAGACTT--TTCTTTCGCCAATA-C 479
Query 487 -CTCAAG-AATGCTCTTAA-AAGAGGCGAGGAAGTAATCTTGAAGATTGATTGGAGTGAG 543
|||||| || |||||||| || ||| ||||||||| || ||||||| || |||||||||
Sbjct 480 TCTCAAGCAA-GCTCTTAAGAA-AGGTGAGGAAGTAGTCCTGAAGATAGACTGGAGTGAG 537
Query 544 TCTA-TACCAAACCCTGATGAGAGAGTTGAGTATGAGCTATGGGCTAACACTAACGATAA 602
|| | |||| | || ||||||||||||||||||||||||||| ||||||| |||||| |
Sbjct 538 TC-ATTACCTCATCCGGATGAGAGAGTTGAGTATGAGCTATGGACTAACACGAACGATGA 596
Query 603 ATGTGGTGTGCAC--TGCCATAAGCA-ATTAGATTTCATAAAGAACTTTAAGGGAAC-GG 658
||| | |||||| || || |||| || | ||||| |||| ||||| || || || |
Sbjct 597 GTGT-G-GTGCACGGTGTGATGAGCAGATGA-ATTTCGTAAAAAACTTCAAAGG-ACATG 652
Query 659 CTCAGATTCTTGAAAAAGGTGGTTA-TACTTTGTTCAGACCTCATTACATTGCTTGGTTT 717
| ||||||||||||||||| || || | ||||||||| ||||||||||||| | ||||||
Sbjct 653 CGCAGATTCTTGAAAAAGGAGGATACT-CTTTGTTCACACCTCATTACATTACATGGTTT 711
Query 718 TGTCCCAAAGA-GCTGCTGCTTAGCAAGCAGTGTAAGACTCAGTGTCTAAACCAAGGGAG 776
||||| ||||| || | | |||||| || |||||| |||||||| |||||||||||||
Sbjct 712 TGTCCTAAAGATTATGTTTC-TAGCAATCAATGTAAGTCTCAGTGTATAAACCAAGGGAG 770
Query 777 GTATTGTGCTCCTGACCCT-AAGCAAGACTTTGAAGATGGATATAATGGGAAAGACGTCG 835
||||||||||||||||||| || |||||||||| |||||||| |||| |||||| | |
Sbjct 771 GTATTGTGCTCCTGACCCTGAA-CAAGACTTTGGTGATGGATACGATGGTAAAGACATTG 829
Query 836 T-TTACGAGAATCT-GAGACAGTTATGTGTTCATAGAGTAGCTAAGGAGAAGAACACT-T 892
| || |||||| || ||||||||| |||||||||| ||||||||| ||||| ||| | |
Sbjct 830 TCTT-CGAGAA-CTTGAGACAGTTGTGTGTTCATAAAGTAGCTAAAGAGAATAAC-CGGT 886
Query 893 CTTGGGTTTGGTGGGATTATGTGACAGATTTTAACATCAGGTGTTCTATGAAGGAGAAGA 952
|||||||||||||||| |||||||| |||||| |||| || ||||| |||||||||||||
Sbjct 887 CTTGGGTTTGGTGGGACTATGTGACTGATTTTCACATTAGATGTTCAATGAAGGAGAAGA 946
Query 953 AATACAGCAGAGAATGCGCAGAGACTGTCGTGGAATCTCTCGGGTTGTCTCTTGAGAAGA 1012
| || |||| |||||| ||||||| || || |||||||| || ||| | ||||| ||||
Sbjct 947 AGTATAGCAAAGAATGTGCAGAGAGAGTTGTTGAATCTCTAGGTTTGCCACTTGACAAGA 1006
Query 1013 TCAAGAAATGCATTGGTGATCCTGATGCTGATGTAGAGAATGAAGTTCTAAAAGCCGAAC 1072
|||||||||| |||||||||||||||||| |||| |||||||||||| | ||||| || |
Sbjct 1007 TCAAGAAATGTATTGGTGATCCTGATGCTAATGTGGAGAATGAAGTTTTGAAAGCTGAGC 1066
Query 1073 AAGCTTTTCAGTTAGGCCAAGA-GAATCGCGGGGTTGTTACAATCTTTCCAACATTGAT- 1130
|||| ||||| |||| |||| || ||||| | ||| |||||||| |||||||||||
Sbjct 1067 AAGCACTTCAGGTAGGACAAGGTGAC-CGCGGAGATGTCACAATCTTGCCAACATTGATC 1125
Query 1131 GATCAACAATGCTCAATATCGCGGTAAACTGGAGAGAACTGCGGTGCTGAAGGCTATATG 1190
| |||||||||||||||| ||||||||||| ||||||| ||| || || |||||||||||
Sbjct 1126 G-TCAACAATGCTCAATACCGCGGTAAACTTGAGAGAAATGCAGTACTTAAGGCTATATG 1184
Query 1191 TTCAGGATTCAAGGAAAGAACCGAACCTTCAATATGTTTGAA-TGCAGATATAGAGACCA 1249
||| ||||||||||||||||||||||| || ||| | || || |||||| || || |
Sbjct 1185 TTCTGGATTCAAGGAAAGAACCGAACCCGGGATCTGTCT-AAGTGGAGATATTGAAACAA 1243
Query 1250 ATGAATGTCTT-ATAGAAAATGGAGGATGTTGGCAAGACAA-AAGATCTAATGTAACGGC 1307
|||||||||| | || ||||||||| |||||| | ||||| ||| || |||||||| ||
Sbjct 1244 ATGAATGTCTCGA-AGCAAATGGAGGGTGTTGGGAGGACAAGAAG-TCCAATGTAACAGC 1301
Query 1308 TTGCAAGGACACATTTAGGGGAAGAGTATGTGAGTGCCCGGTTTTTAATGGGGTTCAATA 1367
|||||||||||||||||| |||||||| ||||| ||||| ||| | ||||| || || ||
Sbjct 1302 TTGCAAGGACACATTTAGAGGAAGAGTCTGTGAATGCCCTGTTGTGAATGGTGTACAGTA 1361
Query 1368 TAAAGGAGATGGTTATACCTCCTGCAAACCTTATGGACCTGCTAGATGTTC-ATCGAAC- 1425
|||||||||||| ||||| || || |||||||||| ||||| ||||| || || |||
Sbjct 1362 TAAAGGAGATGGATATACATCATGTGAACCTTATGGCCCTGCAAGATGCTCGATT-AACC 1420
Query 1426 AATGGAGGCTGCTGGTCTGAAACCAGAACGGGTCT-AACTTTCTCTGCTTGTTCAAACTC 1484
|| ||||| |||||||||||||||| || ||| || ||||||||| ||||| || ||||
Sbjct 1421 AA-GGAGGTTGCTGGTCTGAAACCAAAAAGGG-CTTAACTTTCTCGGCTTGCTCGAACTT 1478
Query 1485 AGAGACATCAGGATGTCGTTGTCCTCTAGGCTTCCGTGGAGATGGTCTGAAATGTGAAGA 1544
|||||||| |||||||| || |||| ||| || ||||||||||| |||||||||||
Sbjct 1479 GGAGACATCGGGATGTCGCTGCCCTCCAGGGTTTAAAGGAGATGGTCTTAAATGTGAAGA 1538
Query 1545 CATCGATGAATGCAAAGAGAAATCAGCTTGTCAATGTGATG-ACTGCAAATGCAAGAACA 1603
||| ||||| || || ||| ||||||||||||||||||||| | ||||| || |||||||
Sbjct 1539 CATTGATGAGTGTAAGGAGCAATCAGCTTGTCAATGTGATGGA-TGCAACTGTAAGAACA 1597
Query 1604 ATTGGGGAGGATATGAATGCAAATGTTCTA-ACAATAGTGTCTATATGAAAGAAGAAGAC 1662
| |||||||| | |||||||||||| ||| | ||| || |||| ||||||||| |||||
Sbjct 1598 AATGGGGAGGCTTTGAATGCAAATGCTCTGGA-AATCGTCTCTACATGAAAGAACAAGAC 1656
Query 1663 ACTTGTATTGAGAGAAGAAGTGGATCAAGAAGCAGATGGTTGT-TCACAATTGTGGTTCT 1721
||||||||||||||||| | | |||||||| | ||||||| | ||| ||||| ||||
Sbjct 1657 ACTTGTATTGAGAGAAGC-G-G-ATCAAGAATCGGATGGTTCCCT-ACATTTGTGATTCT 1712
Query 1722 AA-TCGCCA-TTGCGGGTATCTCTTTAGGTGCTTATATATTCTACAAGTACCATCTTCAG 1779
| | || | |||| | || | | |||||| ||| ||||||||||||| | ||| |||
Sbjct 1713 AGCT-GC-AGTTGCAAGCATATGTGTAGGTGGTTACGTATTCTACAAGTATCGTCT-CAG 1769
Query 1780 -TCTTACATGGATTCAGAGAT-AGTGT-GTATTATGTCTCAGTACATACCACTCGATAGC 1836
||||| ||||||||||| || | || | ||||||||||||||||| ||| | || |||
Sbjct 1770 GTCTTATATGGATTCAGAAATCA-TGGCG-ATTATGTCTCAGTACATGCCATTAGAGAGC 1827
Query 1837 CAAA 1840
||||
Sbjct 1828 CAAA 1831
> AT4G20110.2 | Symbols: VSR7 | VACUOLAR SORTING RECEPTOR 7 | chr4:10875233-10878729
FORWARD LENGTH=2405
Length=2405
Score = 488 bits (264), Expect = 7e-137
Identities = 1227/1672 (73%), Gaps = 145/1672 (9%)
Strand=Plus/Plus
Query 244 AAAACCTTCACTCCCAAGTCTCCTTATCCCACCATCCT-CCTCATTGATCGTGGA-GTGT 301
|||||||||| ||||||| |||| |||||| || || | || ||||||||||| || |
Sbjct 578 AAAACCTTCAAGCCCAAGTTTCCTCGTCCCACTATTCTGCTTC-TTGATCGTGGAGGT-T 635
Query 302 G-TAACTTTG-CTTTGAAGATATGGAATGGGCAACAATCCGGAGCAGCGGCTGTTCTTTT 359
| | |||||| ||| ||| ||| | | ||| ||| | || || || || |||||| |
Sbjct 636 GCT-ACTTTGCCTTAAAAG-CGTGGCACGCGCAGCAAGCAGGCGCGGCTGCAGTTCTTGT 693
Query 360 AGCAGATAACATTGTTGAGCCATTGTTAACAATGGATTCACCAGAGGA-ATCCCAAGATA 418
|| ||||| | | ||||||||||| |||||||||||||||||||| | | |||||
Sbjct 694 GGCGGATAATGTAGACGAGCCATTGTTGACAATGGATTCACCAGAGGAGA-GCAAAGATG 752
Query 419 AAGATCCTGACTTT-ATAGACAAAATCAA-GATCCCATCGGCT-TTGATCCTTCGCTC-T 474
|| || ||| ||||| || | || |||||||||| | || ||| | || |
Sbjct 753 CGGA---TG-GTTTCATAGAGAAGCT-AACAATCCCATCGG-TGTTAATCGATAAATCAT 806
Query 475 TTCGGTGATAGCCTCAAG--AATGCTCTT-AAAAGAGGCGAGGAA-GTAATCT-TGAAGA 529
|| || ||| | || ||| || | | || | || ||| || || || | | | || |
Sbjct 807 TT-GGAGAT-GACTTAAGACAAGGGT-TTCAGAA-AGG-GAAAAACATAGT-TAT-AAAA 859
Query 530 -TTGATTGGAGTGAGTCTATACCAAACCCTGATGAGAGAGTTGAGTATGAGCTATGGGCT 588
| |||||||| |||||| | || | |||||| ||||||| || |||||||| ||| ||
Sbjct 860 CTAGATTGGAGAGAGTCTGTGCCTCATCCTGATAAGAGAGTAGAATATGAGCTGTGGACT 919
Query 589 AACA-CTAACGATAAATGTGGTGTGCAC--TGCCAT-AAGCA-ATTAGA-TTTCATAAAG 642
|| | | || ||| | ||| | |||||| || || || || | | || ||| | |||
Sbjct 920 AATAGC-AATGATGAGTGT-G-GTGCACGGTGTGATGAA-CAGA-TGGACTTT-GTCAAG 973
Query 643 AACTTT-AAGGGAACGGCTCAGATTCTTGAAAAAGGTGGTTATACTTTGTTCA-GACCTC 700
|||||| |||| | |||||||| || |||||||| |||||||| ||| | | || |
Sbjct 974 AACTTTAAAGGTCA-TGCTCAGATACTCGAAAAAGGCGGTTATACCGCGTTTACG-CCGC 1031
Query 701 ATTACATTGCTTGGTTTTGTCCC-AAAGAGCTGCTGCTTAG-CAAGCAGTGTAAGACTCA 758
|||| ||| |||||||||| ||| || | | || | | || |||||| ||||
Sbjct 1032 ATTATATTACTTGGTTTTG-CCCTTTTCAGTTTATAAACAGTCCA-CATTGTAAGTCTCA 1089
Query 759 GTGTCTAAACCAAGGGAGGTATTGTGCTCCTGACCCTAAGCAAGACTTTGA-AGATGGAT 817
|||| ||||||| |||||||||||||||||||||||| || | | ||| | ||| || |
Sbjct 1090 GTGTATAAACCATGGGAGGTATTGTGCTCCTGACCCTGAG-GATAATTTCAGAGAAGGGT 1148
Query 818 AT-AATGGGAAAGACGTCGT--TTACGAGAATCTGAGACAG-TTATGTGTTCATAGAGTA 873
|| || |||||||| || || || ||||||||||||||| || ||||| ||||||||
Sbjct 1149 ATGAA-GGGAAAGATGTTGTGCTT--GAGAATCTGAGACAGCTT-TGTGTGCATAGAGTT 1204
Query 874 GCTAAGGAGAAG-AACACTTCTTGGGTTTGGTGGGATTATGTGACAGATTTTAACA-TC- 930
|| || ||| || | || |||||||||||||||||||||| || |||||| || ||
Sbjct 1205 GCGAATGAG-AGTAGCAGGCCTTGGGTTTGGTGGGATTATGTTACCGATTTT--CATTCT 1261
Query 931 AGGTGTTCTATGAAGGAGAAGAAATACAGCAGAGAATGCGC--AGAG--ACTG--TC-GT 983
| ||||| |||||||||||||||||||||| ||| || || |||| | || || |
Sbjct 1262 CGATGTTCGATGAAGGAGAAGAAATACAGCATAGATTGTGCTGAGAGTTA-TGAATCTTT 1320
Query 984 -GGA-ATCTCTC-GGGTTGTCTCTTGAGAAGATCAAGAAATGCATTGGTGATCCTGATGC 1040
|| | | || | || || |||||||||||||||||||||||||||||||||| ||
Sbjct 1321 AAGACTTTTTTCAGATTTACCTATTGAGAAGATCAAGAAATGCATTGGTGATCCTGAGGC 1380
Query 1041 TGATGTAGAGAATGAAGTTCTAA-AAGCCGAACAAGCTTT-TCAG-TTAGGCCAAGAGAA 1097
|||| |||||| ||||||| | || | || |||| | | |||| || |||| || |||
Sbjct 1381 TGATACAGAGAACCAAGTTCTGAGAA-CTGAGCAAG-TATCTCAGATT-GGCCGAG-GAA 1436
Query 1098 TCGCGGGGT--TGTTACAATCTTTCCAACATT-GATGATCAACAATGCTCAATATCGCGG 1154
| ||||| |||||| || || |||||||| | | ||||| || ||||||||||| ||
Sbjct 1437 AC-CGGGGAGATGTTACGATATTGCCAACATTAG-TCATCAATAACGCTCAATATCGAGG 1494
Query 1155 TAAACTGGAGAGAACTGCGGTGCTGAAGGCTATATGTTCAGGATTCAAGGAAAGAACCGA 1214
| | |||||||||| ||||| | ||||| ||||| | || || || |||| | | ||
Sbjct 1495 GAGATTGGAGAGAACCGCGGTTTTAAAGGCGATATGCGCTGGTTTTAATGAAACATCGGA 1554
Query 1215 ACCTTCAATATGTTTGAATGCAGATATAGAGACCAATGAATGTCTT-ATAGAA-AATGGA 1272
||| | || || || || ||| | ||||||| ||||| || ||| | | || |||||
Sbjct 1555 GCCTGCCATTTGCTTAAACACAGGTCTAGAGACAAATGAGTGCCTTGA-A-AACAATGGT 1612
Query 1273 GGATGTTGGCAAGA--CAAAAGATCTAATGTAACGGCTTG-CAAGGACACATTTAGGGGA 1329
|| || ||||| || |||||| | || | || ||||| |||| ||||||| || |||
Sbjct 1613 GGTTGCTGGCAGGATACAAAAG--CAAACATCACTGCTTGTCAAG-ACACATTCAGAGGA 1669
Query 1330 AGAGTATGTGAGTGCCCGGTTTTTAATGGGGTTCAATATAAAGGAGATGGTTATACCTCC 1389
||| | || ||||| |||||| | || || ||||||||||||||||| || || || ||
Sbjct 1670 AGACTCTGCGAGTGTCCGGTTGTAAAAGGTGTTCAATATAAAGGAGACGGGTACACTTCA 1729
Query 1390 TGCAAACCTTATGGACCTGCTAGATGTTC-ATCGAACAATGGAGGCTGCTGGTCTGAAAC 1448
|| | ||||||||| ||||| || ||| | || |||||||||||| ||||||||||| ||
Sbjct 1730 TGTACACCTTATGGGCCTGCGAGGTGTACTAT-GAACAATGGAGGTTGCTGGTCTGACAC 1788
Query 1449 CAG-AACGGGTCTAACTTTCTCTGCTTGTTCAAACTCAG-AGAC-ATCAGGATGTCGT-T 1504
|| ||||| | |||||||||||||||| ||| |||| | | | | | || || | |
Sbjct 1789 AAGGAACGGCT-TAACTTTCTCTGCTTGCTCAGACTCTGTAT-CTA-CTGGCTG-CAAAT 1844
Query 1505 GTCCTCTAGGCTTCCGTGGAGATGGTCTGAAATGTGAAGACATCGATGAATGCAAAGAGA 1564
||||| ||| |||| || || ||| ||| |||||||| || | ||||| ||||||
Sbjct 1845 GTCCTGAAGGTTTCCAAGGCGACGGTTTGACGTGTGAAGATATTAACGAATGTAAAGAGC 1904
Query 1565 AATCAGCT-TGTCAATGT-GATGACTGCAAATGCAAGAACA-ATTGGGGAGGATATGAAT 1621
|| | | ||||||||| | | |||| |||||||||| || |||| ||||| |||
Sbjct 1905 GTTCGG-TATGTCAATGTAGCGGT-TGCAGATGCAAGAACTCAT-GGGGTGGATACAAAT 1961
Query 1622 GCAAATGTTCTAACAATAGTG-TCTATATGAAA-GAAGAAGACACTTGTATTGAGAGAAG 1679
||| |||||| | | | | || || ||| || |||| |||||||| ||||||
Sbjct 1962 GCAGCTGTTCTGGTGACCG-GCTTTACAT-AAACGATCAAGATACTTGTATAGAGAGAT- 2018
Query 1680 AAGTGGATC-AAGAAGCAG-ATGGTTGTTCACAATTGTGGTTCTAATCGCCAT--T-GCG 1734
| |||||| || || | | ||||| | ||||| || | | | | | || || | ||
Sbjct 2019 A--TGGATCCAA-AA-CGGCATGGTGGCTCACA-TTCTTGAT--ACTGGCTATCGTTGCA 2071
Query 1735 GGTATCTC--TTTAGGTGCTTATATATTCTACAAGTACCATCTTCAG-TCTTACATGGAT 1791
| || | | ||||| || ||||||||||||||| |||| ||||| |||||||||||
Sbjct 2072 G-TAGC-CGGTTTAGCTGGTTATATATTCTACAAATACCGG-TTCAGGTCTTACATGGAC 2128
Query 1792 TCAGAGAT-AGTGT-GTATTATGTCTCAGTACATACCACTCGATAGCCAAAG 1841
|||||||| | || | || ||||| ||||| || ||||| || ||||||||
Sbjct 2129 TCAGAGATTA-TGACG-ATCATGTCACAGTATATGCCACTTGAGAGCCAAAG 2178
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 92067799530
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5