BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg321462
Length=1134
Score E
Sequences producing significant alignments: (Bits) Value
AT2G37620.1 | Symbols: ACT1, AAc1 | actin 1 | chr2:15779174-157... 1912 0.0
AT3G53750.1 | Symbols: ACT3 | actin 3 | chr3:19915288-19917641 ... 1507 0.0
AT5G09810.1 | Symbols: ACT7 | actin 7 | chr5:3052097-3054614 FO... 1027 0.0
AT3G12110.1 | Symbols: ACT11 | actin-11 | chr3:3857843-3859798 ... 1027 0.0
AT3G46520.1 | Symbols: ACT12 | actin-12 | chr3:17128263-1713021... 992 0.0
AT3G18780.2 | Symbols: ACT2, DER1, LSR2, ENL2 | actin 2 | chr3:... 883 0.0
> AT2G37620.1 | Symbols: ACT1, AAc1 | actin 1 | chr2:15779174-15781561
FORWARD LENGTH=1618
Length=1618
Score = 1912 bits (1035), Expect = 0.0
Identities = 1101/1134 (97%), Gaps = 0/1134 (0%)
Strand=Plus/Plus
Query 1 ATGGCTGATGGTGAAGACATTCAACCTCTTGTTTGCGACAATGGAACTGGAATGGTTAAG 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 165 ATGGCTGATGGTGAAGACATTCAACCTCTTGTTTGCGACAATGGAACTGGAATGGTTAAG 224
Query 61 GCTGGTTTTGCTGGAGATGATGCACCTCGAGCTGTGTTTCCTAGTATTGTGGGTCGTCCT 120
|||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 225 GCTGGTTTTGCTGGGGATGATGCACCTAGAGCTGTGTTTCCTAGTATTGTGGGTCGTCCT 284
Query 121 CGTCACACCGGTGTGATGGTTGGGATGGGGCAAAAGGATGCTTATGTTGGCGATGAAGCT 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 285 CGTCACACCGGTGTGATGGTTGGGATGGGGCAAAAGGATGCTTATGTTGGCGATGAAGCT 344
Query 181 CAATCGAAGCGAGGTATTTTAACTCTCAAGTACCCTATTGAGCATGGGATTGTCAACAAT 240
||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 345 CAATCCAAACGAGGTATTTTAACTCTCAAGTACCCTATTGAGCATGGAATTGTCAACAAT 404
Query 241 TGGGATGATATGGAGAAGATTTGGCATCATACTTTCTATAATGAGCTCCGTGTTGCTCCT 300
|||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct 405 TGGGATGACATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTCCGTGTTGCTCCT 464
Query 301 GAGGAGCATCCGATTCTACTTACCGAGGCACCGCTTAACCCGAAAGCTAATCGTGAGAAG 360
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 465 GAGGAACATCCTATTCTACTTACCGAGGCACCGCTTAACCCGAAAGCTAATCGTGAGAAG 524
Query 361 ATGACTCAAATCATGTTTGAGACTTTTAATGCCCCGGCTATGTATGTGGCTATTCAGGCT 420
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 525 ATGACTCAAATCATGTTTGAGACTTTCAATGCCCCTGCTATGTATGTGGCTATTCAGGCT 584
Query 421 GTTCTTTCTCTTTATGCCAGTGGTCGTACAACCGGTATTGTGCTTGACTCTGGAGATGGT 480
||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 585 GTTCTTTCTCTTTATGCCAGTGGTCGTACTACCGGTATTGTGCTCGACTCTGGAGATGGT 644
Query 481 GTGAGCCACACTGTTCCTATCTATGAGGGTTATGCCCTTCCACATGCGATCCTACGTCTT 540
||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||
Sbjct 645 GTGAGCCACACTGTTCCTATCTATGAGGGGTATGCACTTCCACATGCTATCCTACGTCTT 704
Query 541 GATCTTGCTGGTCGTGACCTCACGGATGCGCTGATGAAGATCCTAACTGAGCGTGGTTAC 600
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 705 GATCTTGCTGGTCGTGACCTCACGGATGCGCTGATGAAGATCCTAACCGAGCGTGGTTAC 764
Query 601 TCTTTCACCACCACAGCAGAGCGTGAAATTGTCAGAGACATAAAGGAGAAGCTTTGCTAC 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 765 TCTTTCACCACCACAGCAGAGCGTGAAATTGTCAGAGACATAAAGGAGAAGCTTTGCTAC 824
Query 661 ATTGCTCTTGACTACGAGCAGGAGCTCGAGACAGCCAAAACCAGCTCAGCTGTTGAGAAG 720
||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct 825 ATTGCTCTTGACTACGAGCAGGAACTCGAGACAGCCAAAACCAGCTCATCTGTTGAGAAG 884
Query 721 AACTACGAGCTACCTGATGGGCAAGTGATAACCATTGGATCAGAGCGATTCCGTTGCCCA 780
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 885 AACTACGAGCTACCTGATGGGCAAGTGATCACCATTGGATCAGAGCGATTCCGTTGTCCT 944
Query 781 GAGGTTCTTTACCAGCCATCTATGATTGGTATGGAGAATGCTGGTATCCATGAAACCACC 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 945 GAGGTTCTTTACCAGCCATCTATGATTGGTATGGAGAATGCTGGTATCCATGAAACCACC 1004
Query 841 TATAACTCCATAATGAAGTGTGATGTCGACATCAGAAAGGACTTGTACGGTAACATTGTG 900
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1005 TATAACTCCATAATGAAGTGTGATGTCGACATCAGGAAGGACTTGTACGGTAACATTGTG 1064
Query 901 CTCAGTGGTGGAACCACAATGTTCCCAGGAATCGCCGACAGAATGAGCAAAGAAATCACT 960
|||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 1065 CTCAGTGGTGGAACCACAATGTTCCCTGGAATCGCCGACAGAATGAGCAAAGAGATCACT 1124
Query 961 GCTTTGGCTCCAAGCAGCATGAAGATCAAAGTCGTTGCCCCTCCAGAGAGGAAATACTCC 1020
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1125 GCTTTGGCTCCAAGCAGCATGAAGATCAAAGTCGTTGCCCCTCCAGAGAGGAAATACTCT 1184
Query 1021 GTCTGGATTGGAGGGTCTATCTTGGCCTCCCTCAGTACCTTCCAGCAGATGTGGATCGCA 1080
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GTCTGGATTGGAGGGTCCATCTTGGCCTCCCTCAGTACCTTCCAGCAGATGTGGATCGCA 1244
Query 1081 AAGGCAGAATACGACGAGTCAGGCCCGTCGATTGTTCACAGGAAATGCTTCTGA 1134
|||||||| || ||||||||||| || ||||||||||||||||| |||||||||
Sbjct 1245 AAGGCAGAGTATGACGAGTCAGGTCCATCGATTGTTCACAGGAAGTGCTTCTGA 1298
> AT3G53750.1 | Symbols: ACT3 | actin 3 | chr3:19915288-19917641
FORWARD LENGTH=1557
Length=1557
Score = 1507 bits (816), Expect = 0.0
Identities = 1030/1136 (91%), Gaps = 4/1136 (0%)
Strand=Plus/Plus
Query 1 ATGGCTGATGGTGAAGACATTCAACCTCTTGTTTGCGACAATGGAACTGGAATGGTTAAG 60
||||||||||||||||| |||||||| ||||| || ||||||||||||||||||||||||
Sbjct 154 ATGGCTGATGGTGAAGATATTCAACCCCTTGTCTGTGACAATGGAACTGGAATGGTTAAG 213
Query 61 GCTGGTTTTGCTGGAGATGATGCACCTCGAGCTGTGTTTCCTAGTATTGTGGGTCGTCCT 120
|||||||||||||| ||||||||||| | ||||||||||| |||||||| || ||||||
Sbjct 214 GCTGGTTTTGCTGGGGATGATGCACCGAGGGCTGTGTTTCCAAGTATTGTTGGCCGTCCT 273
Query 121 CGTCACACCGGTGTGATGGTTGGGATGGGGCAAAAGGATGCTTATGTTGGCGATGAAGCT 180
|| ||||| || ||||||||||| ||||| || |||||||| ||||||||||||||||||
Sbjct 274 CGCCACACTGGAGTGATGGTTGGAATGGGACAGAAGGATGCATATGTTGGCGATGAAGCT 333
Query 181 CAATCGAAGCGAGGTATT-TTAACTCTCAAGTACCCTATTGAGCATGGGATTGTCAACAA 239
||||| ||||| |||||| || || || || |||||||||||||| || |||||||||||
Sbjct 334 CAATCCAAGCGTGGTATTCTT-ACCCTTAAATACCCTATTGAGCACGGTATTGTCAACAA 392
Query 240 TTGGGATGATATGGAGAAGATTTGGCATCATACTTTCTATAATGAGCTCCGTGTTGCTCC 299
||||||||||||||| || || ||||||||||||||||| ||||||||||||||||||||
Sbjct 393 TTGGGATGATATGGAAAAAATCTGGCATCATACTTTCTACAATGAGCTCCGTGTTGCTCC 452
Query 300 TGAGGAGCATCCGATTCTACTTACCGAGGCACCGCTTAACCCGAAA-GCTAATCGTGAGA 358
||||||||||| ||||| || || || || || |||||||| ||| ||||| |||||||
Sbjct 453 CGAGGAGCATCCTATTCTGCTCACTGAAGCGCCTCTTAACCC-AAAGGCTAACCGTGAGA 511
Query 359 AGATGACTCAAATCATGTTTGAGACTTTTAATGCCCCGGCTATGTATGTGGCTATTCAGG 418
|||||||||| ||||||||||| || ||||| || |||||||||||||| || ||||| |
Sbjct 512 AGATGACTCAGATCATGTTTGAAACCTTTAACGCTCCGGCTATGTATGTCGCCATTCAAG 571
Query 419 CTGTTCTTTCTCTTTATGCCAGTGGTCGTACAACCGGTATTGTGCTTGACTCTGGAGATG 478
|||| || || |||||||| ||||||||||| || |||||||||||||||||||||||||
Sbjct 572 CTGTCCTGTCGCTTTATGCTAGTGGTCGTACTACTGGTATTGTGCTTGACTCTGGAGATG 631
Query 479 GTGTGAGCCACACTGTTCCTATCTATGAGGGTTATGCCCTTCCACATGCGATCCTACGTC 538
||||||| ||||| || ||||||||||||||||| || || || ||||| ||||||||||
Sbjct 632 GTGTGAGTCACACGGTCCCTATCTATGAGGGTTACGCTCTCCCGCATGCAATCCTACGTC 691
Query 539 TTGATCTTGCTGGTCGTGACCTCACGGATGCGCTGATGAAGATCCTAACTGAGCGTGGTT 598
|||||||||| |||||||||||||| ||||| |||||||||||||| |||||||||||||
Sbjct 692 TTGATCTTGCAGGTCGTGACCTCACAGATGCTCTGATGAAGATCCTCACTGAGCGTGGTT 751
Query 599 ACTCTTTCACCACCACAGCAGAGCGTGAAATTGTCAGAGACATAAAGGAGAAGCTTTGCT 658
||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct 752 ACTCTTTCACCACAACAGCTGAGCGTGAAATTGTCAGAGACATCAAGGAGAAGCTTTGCT 811
Query 659 ACATTGCTCTTGACTACGAGCAGGAGCTCGAGACAGCCAAAACCAGCTCAGCTGTTGAGA 718
|||||||||||||||| ||||||||||| ||||| || ||||||||||| |||| ||||
Sbjct 812 ACATTGCTCTTGACTATGAGCAGGAGCTTGAGACGGCTAAAACCAGCTCTTCTGTAGAGA 871
Query 719 AGAACTACGAGCTACCTGATGGGCAAGTGATAACCATTGGATCAGAGCGATTCCGTTGCC 778
||||||| ||| ||||||||||||||||||| ||||||||||| ||||| ||||||||||
Sbjct 872 AGAACTATGAGTTACCTGATGGGCAAGTGATCACCATTGGATCTGAGCGTTTCCGTTGCC 931
Query 779 CAGAGGTTCTTTACCAGCCATCTATGATTGGTATGGAGAATGCTGGTATCCATGAAACCA 838
| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 932 CTGAGGTTCTTTACCAGCCATCTATGATCGGTATGGAGAATGCTGGTATCCATGAAACCA 991
Query 839 CCTATAACTCCATAATGAAGTGTGATGTCGACATCAGAAAGGACTTGTACGGTAACATTG 898
|||| |||||||||||||| |||||||| |||||||||||||||||||| ||||||||||
Sbjct 992 CCTACAACTCCATAATGAAATGTGATGTTGACATCAGAAAGGACTTGTATGGTAACATTG 1051
Query 899 TGCTCAGTGGTGGAACCACAATGTTCCCAGGAATCGCCGACAGAATGAGCAAAGAAATCA 958
|||||||||||||||| || |||||||| ||||| || ||||||||||||||||| ||||
Sbjct 1052 TGCTCAGTGGTGGAACAACTATGTTCCCTGGAATTGCTGACAGAATGAGCAAAGAGATCA 1111
Query 959 CTGCTTTGGCTCCAAGCAGCATGAAGATCAAAGTCGTTGCCCCTCCAGAGAGGAAATACT 1018
|||||||||| || |||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct 1112 CTGCTTTGGCACCGAGCAGCATGAAGATCAAAGTCGTTGCACCTCCTGAGAGGAAATACT 1171
Query 1019 CCGTCTGGATTGGAGGGTCTATCTTGGCCTCCCTCAGTACCTTCCAGCAGATGTGGATCG 1078
| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 1172 CTGTCTGGATTGGAGGATCCATCTTGGCCTCCCTCAGTACCTTCCAGCAGATGTGGATCG 1231
Query 1079 CAAAGGCAGAATACGACGAGTCAGGCCCGTCGATTGTTCACAGGAAATGCTTCTGA 1134
||||||||||||| || |||||||||||||||||||||||| |||||||||| |||
Sbjct 1232 CAAAGGCAGAATATGATGAGTCAGGCCCGTCGATTGTTCACCGGAAATGCTTTTGA 1287
> AT5G09810.1 | Symbols: ACT7 | actin 7 | chr5:3052097-3054614
FORWARD LENGTH=1700
Length=1700
Score = 1027 bits (556), Expect = 0.0
Identities = 955/1147 (83%), Gaps = 30/1147 (3%)
Strand=Plus/Plus
Query 1 ATGGCTGATGGTGAAGACATTCAACCTCTTGTTTGCGACAATGGAACTGGAATGGTTAAG 60
||||| |||||||| || ||||| || ||||| || |||||||||||||||||||| |||
Sbjct 173 ATGGCCGATGGTGAGGATATTCAGCCACTTGTCTGTGACAATGGAACTGGAATGGTGAAG 232
Query 61 GCTGGTTTTGCTGGAGATGATGCACCTCGAGCTGTGTTTCCTAGTATTGTGGGTCGTCCT 120
|||||||||||||| |||||||| || |||| ||||| || |||||||| |||||||||
Sbjct 233 GCTGGTTTTGCTGGTGATGATGCCCCGAGAGCAGTGTTCCCAAGTATTGTTGGTCGTCCT 292
Query 121 CGTCACACCGGTGTGATGGTTGGGATGGGGCA-AAAGGATGCTTATGTTGGCGATGAAGC 179
| ||||| ||||| |||||||| ||||| || ||| |||||||| ||||| ||||||||
Sbjct 293 AGGCACACTGGTGTCATGGTTGGTATGGGTCAGAAA-GATGCTTACGTTGGTGATGAAGC 351
Query 180 TCAATCGAAGCGAGGTATTTTAACTCTCAAGTACCCTATTGAGCATGGGATTGTCAA-CA 238
||| || ||| ||||||| | ||||| ||||| || || || ||||| ||||| || |
Sbjct 352 TCAGTCCAAGAGAGGTATCCTCACTCTGAAGTATCCAATCGAACATGGTATTGT-AAGTA 410
Query 239 ATTGGGATGATATGGAGAAGATTTGGCATCATACTTTCTATAATGAGCTCCGTGTTGCTC 298
| |||||||| ||||| ||||| |||||||| |||||||| || ||||| |||||||| |
Sbjct 411 ACTGGGATGACATGGAAAAGATATGGCATCACACTTTCTACAACGAGCTTCGTGTTGCCC 470
Query 299 CTGAGGAGCATCCGA-TTCTACTTACCGAGGCACCGCTTAACCCGAAAGCTAATC-GTGA 356
|||||||||| || | ||||||| || |||||||| |||||||| |||||||| | | ||
Sbjct 471 CTGAGGAGCA-CCCAGTTCTACTCACAGAGGCACCTCTTAACCCTAAAGCTAA-CAGGGA 528
Query 357 GAAGATGACTCAAATCATGTTTGAGACTTTTAATGCCCCGGCTATGTATGTGGCTATTCA 416
|||||||||||| |||||||||||||| || |||| ||| || |||||||| || |||||
Sbjct 529 GAAGATGACTCAGATCATGTTTGAGACATTCAATGTCCCTGCCATGTATGTTGCCATTCA 588
Query 417 GGCTGTTCTTTCTCTTTATGCCAGTGGTCGTACAACCGGTATTGTGCTTGACTCTGGAGA 476
||| ||||||||||| |||||||||||||||||||||||||||||||| || ||||| ||
Sbjct 589 GGCCGTTCTTTCTCTCTATGCCAGTGGTCGTACAACCGGTATTGTGCTCGATTCTGGTGA 648
Query 477 TGGTGTGAGC-CACACTGTTCCTATCTATGAGGGTTATGCCCTTCCACATGCGATCCTAC 535
||||||| | |||||||| || ||||| ||||| ||||| ||||| ||||| ||||| |
Sbjct 649 TGGTGTGT-CTCACACTGTGCCAATCTACGAGGGGTATGCTCTTCCTCATGCTATCCTTC 707
Query 536 GTCTTGATCTTGCTGGTCGTGACCTCACGGA-TGCGCTGATGAAGATCCTAACTGAGCGT 594
||||||||||||| ||||| || ||||| || | | || |||||||| || |||||| |
Sbjct 708 GTCTTGATCTTGCGGGTCGGGATCTCACAGACT-CACTCATGAAGATTCTCACTGAGAGA 766
Query 595 GGTTAC-TCTTTCACCACCACAGCAGAGCGTGAAATTGTCAGAGACATAAAGGAGAAGCT 653
|||||| | || |||||| || ||||| || ||||||||| | |||||||||||||| ||
Sbjct 767 GGTTACATGTT-CACCACTACCGCAGAACGGGAAATTGTCCGTGACATAAAGGAGAAACT 825
Query 654 TTGCTACAT-T-GCTCTTGACTACGAGCAGGAGCTCGAGACAGCCAAAACCAGCTCAGCT 711
| ||| || | ||||||||||||||||| ||||| ||||||||||| | ||| || |
Sbjct 826 T-GCTT-ATGTCGCTCTTGACTACGAGCAAGAGCTAGAGACAGCCAAGAGCAGTTCTTCA 883
Query 712 GTTGAGAAGAACTACGAGCTACCTGATGGGCAAGTGATAACCATTGGATCAGAGCGATTC 771
|| |||||||||||||||||||||||||| ||||| |||||||| ||| | ||| |||||
Sbjct 884 GTGGAGAAGAACTACGAGCTACCTGATGGACAAGTCATAACCATCGGAGCTGAGAGATTC 943
Query 772 CGTTGCCCAGAGGTTCT-TTACCAGCCATCTATGATTGGTATGGA-GAATGCTGGTATCC 829
||||| || |||||||| || ||||||||| | || || ||||| | | |||| ||||
Sbjct 944 CGTTGTCCTGAGGTTCTGTT-CCAGCCATCGCTCATCGGAATGGAAGC-TCCTGGAATCC 1001
Query 830 ATGAAACCACCTATAACTCCATAATGAAGTGTGATGTCGACATCAGAAAGGA-CTTGTAC 888
||||||| || || |||||||| ||||| ||||||||||| ||||| ||||| || ||
Sbjct 1002 ATGAAACAACTTACAACTCCATCATGAAATGTGATGTCGATATCAGGAAGGATCTC-TAT 1060
Query 889 GGTAACATTGTGCTCAGTGGTGGAACCACAATGTTCCCAGGAATCGCCGACAGAATGAGC 948
|| ||||| || ||||||||||| |||| |||||||||||||| || ||| | ||||||
Sbjct 1061 GGAAACATCGTTCTCAGTGGTGGTTCCACCATGTTCCCAGGAATTGCTGACCGTATGAGC 1120
Query 949 AAAGAAATCACTGCT-TTGGCTCCAAGCAGCATGAAGATCAAAGTCGTTGCCCCTCCAGA 1007
||||| ||||| ||| ||| | || ||||||||||||||||| || ||||| || |||||
Sbjct 1121 AAAGAGATCACCGCTCTTG-CACCTAGCAGCATGAAGATCAAGGTGGTTGCACCGCCAGA 1179
Query 1008 GAGGAAATACTCCGTCTGGATTGGAGGGTCTATC-TTGGCCTCCCTCAGTACCTTCCAGC 1066
||| |||||| |||||||| ||||| || ||| ||| | |||||||| |||||||| |
Sbjct 1180 GAGAAAATACAGTGTCTGGATCGGAGGATCAATCCTTG-CATCCCTCAGCACCTTCCAAC 1238
Query 1067 AGATGTGGATCGCAAAG-GCAGAATACGACGAGTCAGGCCCGTCGATTGTTCACAGGAAA 1125
|||||||||| ||||| | || ||||| |||||||| || ||||||||||||||||||
Sbjct 1239 AGATGTGGATTTCAAAGAGT-GAGTACGATGAGTCAGGTCCATCGATTGTTCACAGGAAA 1297
Query 1126 TGCTTCT 1132
|||||||
Sbjct 1298 TGCTTCT 1304
> AT3G12110.1 | Symbols: ACT11 | actin-11 | chr3:3857843-3859798
FORWARD LENGTH=1434
Length=1434
Score = 1027 bits (556), Expect = 0.0
Identities = 952/1144 (83%), Gaps = 24/1144 (2%)
Strand=Plus/Plus
Query 1 ATGGCTGATGGTGAAGACATTCAACCTCTTGTTTGCGACAATGGAACTGGAATGGTTAAG 60
||||| ||||||||||||||||| ||||| || || ||||||||||| ||||||||||||
Sbjct 112 ATGGCAGATGGTGAAGACATTCAGCCTCTCGTCTGTGACAATGGAACCGGAATGGTTAAG 171
Query 61 GCTGGTTTTGCTGGAGATGATGCACCTCGAGCTGTGTTTCCTAGTATTGTGGGTCGTCCT 120
||||| |||||||||||||||||||| ||||||| || ||||| || || |||||||||
Sbjct 172 GCTGGATTTGCTGGAGATGATGCACCAAGAGCTGTATTCCCTAGCATCGTTGGTCGTCCT 231
Query 121 CGTCACACCGGTGTGATGGTTGGGATGGGGCAAAAGGATGCTTATGTTGGCGATGAAGCT 180
|| ||||| ||||| |||||||| ||||| ||||| |||||||| ||||| ||||| |||
Sbjct 232 CGACACACTGGTGTCATGGTTGGTATGGGACAAAAAGATGCTTACGTTGGTGATGAGGCT 291
Query 181 CAATCGAAGCGAGGTATTTTAAC-TCTCAAGTACCCTATTGAGCATGGGATTGTCAACAA 239
|| || ||| |||||||||| || | | || || |||||||||||||| ||||| | |||
Sbjct 292 CAGTCTAAGAGAGGTATTTTGACAT-TGAAATATCCTATTGAGCATGGTATTGTTAGCAA 350
Query 240 TTGGGATGATATGGAGAAGATTTGGCATCATACTTTCTATAATGAGCTCCGTGTTGCTCC 299
||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||
Sbjct 351 CTGGGATGATATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTCCGTGTTGCACC 410
Query 300 TGAGGAGCATCC-GATTCTACTTACCGAGGCACCGCTTAACCCGAAAGCTAATCGTGAGA 358
||| || || || | |||| || || ||||| || || ||||| || || ||||||||||
Sbjct 411 TGAAGAACACCCTG-TTCTTCTCACTGAGGCTCCTCTCAACCCCAAGGCCAATCGTGAGA 469
Query 359 AGATGACTCAAATCATGTTTGAGACTTTTAATGCCCCGGCTATGTATGTGGCTATTCAGG 418
| |||||||| || |||||||| ||||| || | || || |||||||| ||||| || |
Sbjct 470 AAATGACTCAGATTATGTTTGAAACTTTCAACACTCCTGCCATGTATGTCGCTATCCAAG 529
Query 419 CTGTTCTTTCTCTTTATGCCAGTGGTCGTACAACCGGTATTGTGCTT-GACTCTGGAGAT 477
|||||||||| || || || ||||||||||| || ||||||||| || ||||||||||||
Sbjct 530 CTGTTCTTTCCCTCTACGCTAGTGGTCGTACTACTGGTATTGTG-TTGGACTCTGGAGAT 588
Query 478 GGTGTGAGCCACACTGTTCCTATCTATGAGGGTTATGCCCTTCCACATGCGATCCTACGT 537
|||||||| ||||||||||| || ||||| || ||||| ||||||||||| || || |||
Sbjct 589 GGTGTGAGTCACACTGTTCCAATTTATGAAGGATATGCTCTTCCACATGCTATTCTGCGT 648
Query 538 CTT-GATCTTGCTGGTCGTGACCTCACGGA-TGCGCTGATGAAGATCCTAACTGAGCGTG 595
|| || ||||| || |||||||| || || | | || ||||||||| |||| |||||||
Sbjct 649 -TTGGACCTTGCAGGCCGTGACCTTACTGATTAC-CTCATGAAGATCTTAACCGAGCGTG 706
Query 596 GTTACTCTTTCACCACCACAGCAGAGCGTGAAATTGTCAGAGACAT-AAAGGAGAAGCTT 654
||||||| ||||| ||| |||||||||||||||| || || || | ||| ||||| | |
Sbjct 707 GTTACTCATTCACTACCTCAGCAGAGCGTGAAATCGTAAGGGATGTGAAA-GAGAAAC-T 764
Query 655 TGC-TACATTGCTCTTGACTACGAGCAGGAGCTCGAGACAGCCAAA-ACCAGCTCAGCTG 712
||| ||||| || |||||||||||||| ||| | || |||| |||| || |||||| | |
Sbjct 765 TGCTTACATAGCACTTGACTACGAGCAAGAGATGGAAACAG-CAAACACAAGCTCATCCG 823
Query 713 TTGAGAAGAACTACGAGCTACCTGATGGGCAAGTGATAACCATTGGATCAGAGCGATTCC 772
||||||||| ||| ||| | |||||||| || ||||| ||||||||| |||| ||||||
Sbjct 824 TTGAGAAGAGCTATGAGTTGCCTGATGGACAGGTGATCACCATTGGAGGAGAGAGATTCC 883
Query 773 GTTGCCCAGAGGTTCT-TTACCAGCCATCTATGATTGGTATGG-AGAATGCTGGTATCCA 830
| ||||| |||||||| || ||| || ||| || | || |||| || ||||||||| ||
Sbjct 884 GCTGCCCGGAGGTTCTGTT-CCAACCGTCTTTGGTGGGAATGGAAG-CTGCTGGTATTCA 941
Query 831 TGAAACCACCTATAACTCCATAATGAAGTGTGATGTCGACATCAGAAAGGACT-TGTACG 889
|| ||||| || || ||||| |||||||||||||| || ||||| ||||| | |||| |
Sbjct 942 CGAGACCACTTACAATTCCATCATGAAGTGTGATGTGGATATCAGGAAGGA-TCTGTATG 1000
Query 890 GTAACATTGTGCTCAGTGGTGGAACCACAATGTTCCCAGGAATCGCCGACAGAATGAGCA 949
| |||||||||||||||||||||||||| |||||||| ||||| || || || |||||||
Sbjct 1001 GAAACATTGTGCTCAGTGGTGGAACCACCATGTTCCCTGGAATTGCTGATAGGATGAGCA 1060
Query 950 AAGAAATCACTGCTTTGGCTCCAAGCAGCATGAAGATCAAAGTCGTTGCCCCTCCAGAGA 1009
|||| |||||||||||||||||||||||||||||||| || || ||||| || |||||||
Sbjct 1061 AAGAGATCACTGCTTTGGCTCCAAGCAGCATGAAGATTAAGGTGGTTGCTCCACCAGAGA 1120
Query 1010 GGAAATACTCCGTCTGGATTGGAGGGTCTAT-CTTGGCCTCCCTCAGTACCTTCCAGCAG 1068
|||| ||| |||||||||||||| || || || | | || |||||||||||||| |||
Sbjct 1121 GGAAGTACAGTGTCTGGATTGGAGGCTCCATTCTAG-CATCACTCAGTACCTTCCAACAG 1179
Query 1069 ATGTGGATCGCAAAGGCAGAATACGACGAGTCAGGCCCGTCGATTGTTCACAGGAAATGC 1128
|||||||| |||||||| || || || |||||||| || || || || |||||||| |||
Sbjct 1180 ATGTGGATAGCAAAGGCCGAGTATGATGAGTCAGGGCCATCAATAGTCCACAGGAAGTGC 1239
Query 1129 TTCT 1132
||||
Sbjct 1240 TTCT 1243
> AT3G46520.1 | Symbols: ACT12 | actin-12 | chr3:17128263-17130210
FORWARD LENGTH=1453
Length=1453
Score = 992 bits (537), Expect = 0.0
Identities = 943/1142 (83%), Gaps = 16/1142 (1%)
Strand=Plus/Plus
Query 1 ATGGCTGATGGTGAAGACATTCAACCTCTTGTTTGCGACAATGGAACTGGAATGGTTAAG 60
||||| || |||||||| ||||| || || |||||||| || || ||||||||||| |||
Sbjct 91 ATGGCGGACGGTGAAGATATTCAGCCGCTCGTTTGCGATAACGGGACTGGAATGGTCAAG 150
Query 61 GCTGGTTTTGCTGGAGATGATGCACCTCGAGCTGTGTTTCCTAGTATTGTGGGTCGTCCT 120
||||||||||| || |||||||| ||| ||||||| || || ||||| || || |||||
Sbjct 151 GCTGGTTTTGCAGGTGATGATGCTCCTAGAGCTGTATTCCCAAGTATCGTTGGCCGTCCA 210
Query 121 CGTCACACCGGTGTGATGGTTGGGATGGGGCAAAAGGATGCTTATGTTGGCGATGAAGCT 180
|||||||| || ||||||||||| ||||| ||||||||||| || || || || || ||
Sbjct 211 CGTCACACGGGAGTGATGGTTGGAATGGGACAAAAGGATGCATACGTCGGAGACGAGGCA 270
Query 181 CAATCGAAGCGAGGTATTTTAACTCTCAAGTACCCTATTGAGCATGGGATTGTCAACAAT 240
|| ||||| || ||||| || ||||||||||| || ||||||||||| |||||||||||
Sbjct 271 CAGTCGAAACGTGGTATCTTGACTCTCAAGTATCCAATTGAGCATGGTATTGTCAACAAC 330
Query 241 TGGGATGATATGGAGAAGATTTGGCATCATACTTTCTATAATGAGCTCCGTGTTGCTCCT 300
||||||||||||||||||||||||||||| |||||||| |||||||| |||||||| ||
Sbjct 331 TGGGATGATATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTGCGTGTTGCCCCG 390
Query 301 GAGGAGCATCCGATTCTACTTACCGAGGCACCGCTTAACCCGAAAGCTAATCGTGAGAAG 360
|| ||||||||| || | || ||||| || |||||||| ||||| ||||| |||||||||
Sbjct 391 GAAGAGCATCCGGTTTTGCTAACCGAAGCGCCGCTTAATCCGAAGGCTAACCGTGAGAAG 450
Query 361 ATGACTCAAATCATGTTTGAGACTTTTAATGCCCCGGCTATGTATGTGGCTATTCAGGCT 420
||||| || ||||||||||| || || || | || ||||||||||| || ||||| |||
Sbjct 451 ATGACACAGATCATGTTTGAAACATTCAACACTCCTGCTATGTATGTTGCCATTCAAGCT 510
Query 421 GTTCTTTCTCTTTATGCCAGTGGTCGTACAACCGGTATTGTGCTTG-ACTCTGGAGATGG 479
||||| || || ||||| ||||| ||||| || |||||||| ||| |||||||||||||
Sbjct 511 GTTCTCTCCCTCTATGCTAGTGGCCGTACTACTGGTATTGTT-TTGGACTCTGGAGATGG 569
Query 480 TGTGAGCCACACTGTTCCTATCTATGAGGGTTATGCCCTTCCACATGCGATCCTACGTCT 539
|||||||||||| || || ||||| ||||||||||| |||||||| || ||||| |||||
Sbjct 570 TGTGAGCCACACGGTACCAATCTACGAGGGTTATGCACTTCCACACGCAATCCTGCGTCT 629
Query 540 TGATCTTGCTGGTCGTGACCTCACGGATGCGC-TGATGAAGATCCTAACTGAGCGTGGTT 598
||||||||| ||||||||||| || || | | | ||||| ||||| || ||||||||||
Sbjct 630 TGATCTTGCAGGTCGTGACCTAACCGAC-CACCTCATGAAAATCCTGACAGAGCGTGGTT 688
Query 599 ACTCTTTCACCACCACAGCAGAGCGTGAAATTGTCAGAGACATAAAGGAGAAGCTTT-GC 657
|||| |||||||| || || |||||||| |||||||||||||| ||||||||||| | |
Sbjct 689 ACTCATTCACCACAACTGCTGAGCGTGAGATTGTCAGAGACATGAAGGAGAAGCTCTCG- 747
Query 658 TACATTGCTCTTG-ACTACGAGCAGGAGCTCGAGACAGCCAAAACCAGCTCAGCTGTTGA 716
|||||||| |||| |||| ||||| ||||| ||||| |||||||||||||| |||| ||
Sbjct 748 TACATTGC-CTTGGACTATGAGCAAGAGCTTGAGACTTCCAAAACCAGCTCATCTGTGGA 806
Query 717 GAAGAACTACGAGCTACCTGATGGGCAAGTGATAACCATTGGATCAGAGCGATTCCGTTG 776
||||| || |||||| || || || |||||||||||||| || ||||||| ||||| ||
Sbjct 807 GAAGAGCTTCGAGCTGCCAGACGGTCAAGTGATAACCATCGGGGCAGAGCGTTTCCGGTG 866
Query 777 CCCAGAGGTTCT-TTACCAGCCATCTATGATTGGTATGGAGAATGCTGGTATCCATGAAA 835
|| || ||||| || ||||||||| ||||| || ||||| ||| | || || |||||||
Sbjct 867 TCCTGAAGTTCTGTT-CCAGCCATCCATGATCGGAATGGAAAATCCGGGAATTCATGAAA 925
Query 836 CCACCTATAACTCCATAATGAAGTGTGATGTCGACATCAGAAAGGA-CTTGTACGGTAAC 894
| || || ||||| || ||||| |||||||| || ||||| ||||| ||| || || |||
Sbjct 926 CTACTTACAACTCAATCATGAAATGTGATGTGGATATCAGGAAGGATCTT-TATGGAAAC 984
Query 895 ATTGTGCTCAGTGGTGGAACCACAATGTTCC-CAGGAATCGCCGACAGAATGAGCAAAGA 953
|||||||| |||||||| ||||||||||| | ||| | | || || ||||| |||||
Sbjct 985 ATTGTGCTTAGTGGTGGCACCACAATGTTTGGCGGGATTGGT-GATAGGATGAGTAAAGA 1043
Query 954 AATCACTGCTTTGGCTCCAAGCAGCATGAAGATCAAAGTCGTTGCCCCTCCAGAGAGGAA 1013
|||||| || ||||| || ||||| |||||||||||||| ||||| || || || |||||
Sbjct 1044 AATCACCGCGTTGGCGCCGAGCAGTATGAAGATCAAAGTGGTTGCTCCACCGGAAAGGAA 1103
Query 1014 ATACTCCGTCTGGATTGGAGGGTCTATCTTGGCCTCCCTCAGTACCTTCCAGCAGATGTG 1073
||| || ||||| || || ||||||||||| || |||||||| ||||||||||||||
Sbjct 1104 GTACAGTGTTTGGATCGGTGGCTCTATCTTGGCTTCTCTCAGTACTTTCCAGCAGATGTG 1163
Query 1074 GATCGC-AAAGGCAGAATACGACGAGTCAGGCCCGTCGATTGTTCACAGGAAATGCTTCT 1132
||| || |||| | || || || || || || |||||||| || |||||||| |||||||
Sbjct 1164 GATTGCGAAAGCC-GAGTATGATGAATCTGGACCGTCGATCGTCCACAGGAAGTGCTTCT 1222
Query 1133 GA 1134
||
Sbjct 1223 GA 1224
> AT3G18780.2 | Symbols: ACT2, DER1, LSR2, ENL2 | actin 2 | chr3:6474842-6477204
FORWARD LENGTH=1756
Length=1756
Score = 883 bits (478), Expect = 0.0
Identities = 940/1158 (81%), Gaps = 52/1158 (4%)
Strand=Plus/Plus
Query 1 ATGGCTGATGG-TGAAGACATTCAACCTCTTGTTTGCGACAATGGAACTGGAATGGTTAA 59
|||||||| || ||| || |||||||| | || || |||||||| || || ||||| ||
Sbjct 251 ATGGCTGA-GGCTGATGATATTCAACCAATCGTGTGTGACAATGGTACCGGTATGGTGAA 309
Query 60 GGCTGGTTTTGCTGGAGATGATGCACCTC-GAGCTGTGTTTCCTAGTATTGTGGGTCGTC 118
|||||| ||||| ||||||||||| || | | ||||| ||||| ||| |||| ||| | |
Sbjct 310 GGCTGGATTTGCAGGAGATGATGCTCC-CAGGGCTGTTTTTCCCAGTGTTGTTGGTAGGC 368
Query 119 CTCGTCA-CACCGGTGTGATGGTTGGGATGGGGCAAAAGGATGCTTATGTTGGCGATGAA 177
| | || || ||||| |||||||||||| || |||||||| |||||||| ||||||
Sbjct 369 CAAGACATCA-TGGTGTCATGGTTGGGATGAACCAGAAGGATGCATATGTTGGTGATGAA 427
Query 178 GCTCAATCGAAGCGAGGTATT-TTAACTCTCAAGTACCCTATTGAGCATGG-GATTGTCA 235
|| ||||| ||| |||||||| ||| || | ||||| |||||||||||||| | |||| |
Sbjct 428 GCACAATCCAAGAGAGGTATTCTTACCT-TGAAGTATCCTATTGAGCATGGTG-TTGTTA 485
Query 236 ACAATTGGGATGATATGGAGAAGATTTGGCATCATACTTTCTATAATGAGCTCCGTGTTG 295
||| |||||||||||||| ||||| |||||||| |||||||| |||||||| ||| |||
Sbjct 486 GCAACTGGGATGATATGGAAAAGATCTGGCATCACACTTTCTACAATGAGCTTCGTATTG 545
Query 296 CTCCTGAGGAGCATCC-GATTCTACTTACCGAGGCACCGCTTAACCCGAAA-GCTAATC- 352
||||||| ||||| || | |||| ||||||||||| || |||||||| ||| || || |
Sbjct 546 CTCCTGAAGAGCACCCTG-TTCTTCTTACCGAGGCTCCTCTTAACCC-AAAGGCCAA-CA 602
Query 353 GTGAGAAGATGACTCAAATCATGTTTGAGACTTTTAA-TGC-CCCGGCTATGTATGTGGC 410
| ||||||||||||||||||||||||||||| ||||| | | ||| ||||||||||| ||
Sbjct 603 GAGAGAAGATGACTCAAATCATGTTTGAGACCTTTAACT-CTCCC-GCTATGTATGTCGC 660
Query 411 TATTCAGGCTGTTCTTTCTCTT-TATGCCAGTGGTCGTACAACCGGTATTGTGCTTGACT 469
|| || |||||||| || ||| || ||||||||||||||||||||||||||||| || |
Sbjct 661 CATCCAAGCTGTTCTCTC-CTTGTACGCCAGTGGTCGTACAACCGGTATTGTGCTGGATT 719
Query 470 CTGGAGATGGTGTGAGC-CACACTGTTCCTATCTATGAGGG-TTATGCCCTTCCACATGC 527
|||| ||||||||| | |||||||| || ||||| ||||| || | | ||||| |||||
Sbjct 720 CTGGTGATGGTGTG-TCTCACACTGTGCCAATCTACGAGGGTTTCT-CTCTTCCTCATGC 777
Query 528 GATCCTACGTCTTGATCTTGCTGGTCGTGACCTCACGGA-TGCGCTGATGAAGATCCTAA 586
||||| |||||||| |||||||| |||||||| || || | | || ||||||||||| |
Sbjct 778 CATCCTCCGTCTTGACCTTGCTGGACGTGACCTTACTGATTAC-CTCATGAAGATCCTTA 836
Query 587 CTGAGCGTGGTTACTCT-TTCACCACCACAGCAGAGCGTGAAATTGTCAGAGACATAAAG 645
| ||| | |||||| | |||||||| ||||||||||| |||||||| |||||||| |||
Sbjct 837 CAGAGAGAGGTTAC-ATGTTCACCACAACAGCAGAGCGGGAAATTGTAAGAGACATCAAG 895
Query 646 GAGAAGCTTTGCTACATTGCTCTTGACTACGAGCAGGAGCTCGAGACAGC-CAAA-ACCA 703
|||||||| | || ||||| ||||||||||||||||| | | || | | |||| ||||
Sbjct 896 GAGAAGCTCTCCTTTGTTGCTGTTGACTACGAGCAGGAGAT-G-GAAACCTCAAAGACCA 953
Query 704 GCTCAGCTGTTGAGAAGAACTACGAGCTACCTGATGGGCAAGTGATAACCATTGGAT-CA 762
|||| | | ||||||||||| || |||| ||||||||||| || || ||||| | |
Sbjct 954 GCTCTTCCATCGAGAAGAACTATGAATTACCCGATGGGCAAGTCATCACGATTGG-TGCT 1012
Query 763 GAGCGATTCCGTTGCCCAGAGGTTCTT-TACCAGCCATC-TATGATTGGTATGG-AGAAT 819
||| ||||| | |||||||| | |||| | |||||| || | || | || |||| || |
Sbjct 1013 GAGAGATTCAGATGCCCAGAAG-TCTTGTTCCAGCCCTCGTTTG-TGGGAATGGAAG-CT 1069
Query 820 GCTGGTATCCATGAAACCACCTATAACTCCATAATGAAGTGTGATGTCGACATCAGAAAG 879
||||| ||||| || || ||||||||||| || |||||||||||||| || ||||| |||
Sbjct 1070 GCTGGAATCCACGAGACAACCTATAACTCAATCATGAAGTGTGATGTGGATATCAGGAAG 1129
Query 880 GACT-TGTACGGTAACATTGTGCTCAGTGGTGGAACCACAATGTTCCCAGGAATCGCCGA 938
|| | |||||||||||||||||||||||||||||||||| |||||| |||| ||||| ||
Sbjct 1130 GA-TCTGTACGGTAACATTGTGCTCAGTGGTGGAACCACTATGTTCTCAGGTATCGCTGA 1188
Query 939 CAGAATGAGCAAAGAAATCACTGCT-TTGGCTCCAAGCAGCATGAAGATCAAAGTCGTTG 997
| | ||||||||||||||||| || ||| | ||||||||||||||||| || |||||||
Sbjct 1189 CCGTATGAGCAAAGAAATCACAGCACTTG-CACCAAGCAGCATGAAGATTAAGGTCGTTG 1247
Query 998 CCCCTCCAGAGAGGAAATACTCCGTCTGGATTGGAGGGTCTAT-CTTGGCCTCCCTCAGT 1056
| || || || ||||| ||| |||||||| || || || || |||| | ||||||||
Sbjct 1248 CACCACCTGAAAGGAAGTACAGTGTCTGGATCGGTGGTTCCATTCTTG-CTTCCCTCAGC 1306
Query 1057 ACCTTCCAGCAGATGTGGATCGCAAAGGCAGAATACGACGAGTCAGGCCC-GTCGATT-G 1114
|| |||||||||||||||||| | ||||| || || || ||| |||| || | || | |
Sbjct 1307 ACATTCCAGCAGATGTGGATCTCCAAGGCCGAGTATGATGAGGCAGGTCCAG--GAATCG 1364
Query 1115 TTCACAGGAAATGCTTCT 1132
||||||| ||||| ||||
Sbjct 1365 TTCACAGAAAATGTTTCT 1382
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 55622203860
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5