BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg321465
Length=1101
Score E
Sequences producing significant alignments: (Bits) Value
AT2G37620.1 | Symbols: ACT1, AAc1 | actin 1 | chr2:15779174-157... 1325 0.0
AT3G53750.1 | Symbols: ACT3 | actin 3 | chr3:19915288-19917641 ... 976 0.0
AT5G59370.1 | Symbols: ACT4 | actin 4 | chr5:23949739-23951837 ... 785 0.0
AT3G46520.1 | Symbols: ACT12 | actin-12 | chr3:17128263-1713021... 741 0.0
AT3G12110.1 | Symbols: ACT11 | actin-11 | chr3:3857843-3859798 ... 715 0.0
AT1G49240.1 | Symbols: ACT8 | actin 8 | chr1:18215872-18218313 ... 669 0.0
AT3G18780.2 | Symbols: ACT2, DER1, LSR2, ENL2 | actin 2 | chr3:... 619 1e-176
> AT2G37620.1 | Symbols: ACT1, AAc1 | actin 1 | chr2:15779174-15781561
FORWARD LENGTH=1618
Length=1618
Score = 1325 bits (717), Expect = 0.0
Identities = 761/783 (97%), Gaps = 0/783 (0%)
Strand=Plus/Plus
Query 1 ATGGCTGATGGTGAAGACATTCAACCTCTTGTTTGCGACAATGGAACTGGAATGGTTAAG 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 165 ATGGCTGATGGTGAAGACATTCAACCTCTTGTTTGCGACAATGGAACTGGAATGGTTAAG 224
Query 61 GCTGGTTTTGCTGGGGATGATGCACCTCGAGCTGTGTTTCCTAGTATTGTGGGTCGTCCT 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 225 GCTGGTTTTGCTGGGGATGATGCACCTAGAGCTGTGTTTCCTAGTATTGTGGGTCGTCCT 284
Query 121 CGTCACACCGGTGTGATGGTTGGGATGGGGCAAAAGGATGCTTATGTTGGCGATGAAGCT 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 285 CGTCACACCGGTGTGATGGTTGGGATGGGGCAAAAGGATGCTTATGTTGGCGATGAAGCT 344
Query 181 CAATCCAAACGAGGTATTTTAACTCTCAAGTACCCTATTGAGCATGGGATTGTTAACAAT 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 345 CAATCCAAACGAGGTATTTTAACTCTCAAGTACCCTATTGAGCATGGAATTGTCAACAAT 404
Query 241 TGGGATGATATGGAGAAGATTTGGCATCACACTTTCTATAATGAGCTACGTGTTGCTCCT 300
|||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 405 TGGGATGACATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTCCGTGTTGCTCCT 464
Query 301 GAGGAGCATCCGATTTTACTTACCGAGGCACCGCTTAACCCGAAAGCTAATCGTGAGAAG 360
||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 465 GAGGAACATCCTATTCTACTTACCGAGGCACCGCTTAACCCGAAAGCTAATCGTGAGAAG 524
Query 361 ATGACTCAAATCATGTTTGAGACTTTTAATGCCCCGGCTATGTATGTGGCTATTCAGGCT 420
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 525 ATGACTCAAATCATGTTTGAGACTTTCAATGCCCCTGCTATGTATGTGGCTATTCAGGCT 584
Query 421 GTTCTTTCTCTTTATGCCAGTGGTCGTACAACTGGTATTGTGCTTGACTCTGGAGATGGT 480
||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||
Sbjct 585 GTTCTTTCTCTTTATGCCAGTGGTCGTACTACCGGTATTGTGCTCGACTCTGGAGATGGT 644
Query 481 GTGAGCCACACTGTTCCTATCTATGAGGGTTATGCCCTTCCACATGCGATCCTACGTCTT 540
||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||
Sbjct 645 GTGAGCCACACTGTTCCTATCTATGAGGGGTATGCACTTCCACATGCTATCCTACGTCTT 704
Query 541 GATCTTGCTGGTCGTGACCTCACGGATGCGCTGATGAAGATCCTAACTGAGCGTGGTTAC 600
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 705 GATCTTGCTGGTCGTGACCTCACGGATGCGCTGATGAAGATCCTAACCGAGCGTGGTTAC 764
Query 601 TCTTTCACCACCACAGCAGAGCGTGAAATTGTCAGAGACATAAAGGAGAAGCTTTGCTAC 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 765 TCTTTCACCACCACAGCAGAGCGTGAAATTGTCAGAGACATAAAGGAGAAGCTTTGCTAC 824
Query 661 ATTGCTCTTGACTACGAGCAGGAGCTCGAGACAGCCAAAACCAGCTCAGCTGTTGAGAAG 720
||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct 825 ATTGCTCTTGACTACGAGCAGGAACTCGAGACAGCCAAAACCAGCTCATCTGTTGAGAAG 884
Query 721 AACTACGAGCTACCTGATGGGCAAGTGATCACCATTGGATCAGAGCGATTCCGTTGCCCA 780
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 885 AACTACGAGCTACCTGATGGGCAAGTGATCACCATTGGATCAGAGCGATTCCGTTGTCCT 944
Query 781 GAG 783
|||
Sbjct 945 GAG 947
Score = 538 bits (291), Expect = 4e-152
Identities = 311/321 (97%), Gaps = 0/321 (0%)
Strand=Plus/Plus
Query 781 GAGAATGCTGGTATCCATGAAACCACCTATAACTCCATAATGAAGTGTGATGTCGACATC 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 978 GAGAATGCTGGTATCCATGAAACCACCTATAACTCCATAATGAAGTGTGATGTCGACATC 1037
Query 841 AGAAAGGACTTGTACGGTAACATTGTGCTCAGTGGTGGAACCACAATGTTCCCAGGAATC 900
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1038 AGGAAGGACTTGTACGGTAACATTGTGCTCAGTGGTGGAACCACAATGTTCCCTGGAATC 1097
Query 901 GCCGACAGAATGAGCAAAGAAATCACTGCTTTGGCTCCAAGCAGCATGAAGATCAAAGTC 960
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1098 GCCGACAGAATGAGCAAAGAGATCACTGCTTTGGCTCCAAGCAGCATGAAGATCAAAGTC 1157
Query 961 GTTGCCCCTCCAGAGAGGAAATACTCCGTCTGGATTGGAGGGTCTATCTTGGCCTCCCTC 1020
|||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct 1158 GTTGCCCCTCCAGAGAGGAAATACTCTGTCTGGATTGGAGGGTCCATCTTGGCCTCCCTC 1217
Query 1021 AGTACCTTCCAGCAGATGTGGATCGCAAAGGCAGAATATGATGAGTCAGGCCCGTCGATT 1080
||||||||||||||||||||||||||||||||||| ||||| |||||||| || ||||||
Sbjct 1218 AGTACCTTCCAGCAGATGTGGATCGCAAAGGCAGAGTATGACGAGTCAGGTCCATCGATT 1277
Query 1081 GTTCACAGGAAATGCTTCTGA 1101
||||||||||| |||||||||
Sbjct 1278 GTTCACAGGAAGTGCTTCTGA 1298
> AT3G53750.1 | Symbols: ACT3 | actin 3 | chr3:19915288-19917641
FORWARD LENGTH=1557
Length=1557
Score = 976 bits (528), Expect = 0.0
Identities = 700/785 (89%), Gaps = 4/785 (1%)
Strand=Plus/Plus
Query 1 ATGGCTGATGGTGAAGACATTCAACCTCTTGTTTGCGACAATGGAACTGGAATGGTTAAG 60
||||||||||||||||| |||||||| ||||| || ||||||||||||||||||||||||
Sbjct 154 ATGGCTGATGGTGAAGATATTCAACCCCTTGTCTGTGACAATGGAACTGGAATGGTTAAG 213
Query 61 GCTGGTTTTGCTGGGGATGATGCACCTCGAGCTGTGTTTCCTAGTATTGTGGGTCGTCCT 120
|||||||||||||||||||||||||| | ||||||||||| |||||||| || ||||||
Sbjct 214 GCTGGTTTTGCTGGGGATGATGCACCGAGGGCTGTGTTTCCAAGTATTGTTGGCCGTCCT 273
Query 121 CGTCACACCGGTGTGATGGTTGGGATGGGGCAAAAGGATGCTTATGTTGGCGATGAAGCT 180
|| ||||| || ||||||||||| ||||| || |||||||| ||||||||||||||||||
Sbjct 274 CGCCACACTGGAGTGATGGTTGGAATGGGACAGAAGGATGCATATGTTGGCGATGAAGCT 333
Query 181 CAATCCAAACGAGGTATT-TTAACTCTCAAGTACCCTATTGAGCATGGGATTGTTAACAA 239
|||||||| || |||||| ||| | || || |||||||||||||| || ||||| |||||
Sbjct 334 CAATCCAAGCGTGGTATTCTTACC-CTTAAATACCCTATTGAGCACGGTATTGTCAACAA 392
Query 240 TTGGGATGATATGGAGAAGATTTGGCATCACACTTTCTATAATGAGCTACGTGTTGCTCC 299
||||||||||||||| || || |||||||| |||||||| |||||||| |||||||||||
Sbjct 393 TTGGGATGATATGGAAAAAATCTGGCATCATACTTTCTACAATGAGCTCCGTGTTGCTCC 452
Query 300 TGAGGAGCATCCGATTTTACTTACCGAGGCACCGCTTAACCCGAAAG-CTAATCGTGAGA 358
||||||||||| ||| | || || || || || |||||||| |||| |||| |||||||
Sbjct 453 CGAGGAGCATCCTATTCTGCTCACTGAAGCGCCTCTTAACCC-AAAGGCTAACCGTGAGA 511
Query 359 AGATGACTCAAATCATGTTTGAGACTTTTAATGCCCCGGCTATGTATGTGGCTATTCAGG 418
|||||||||| ||||||||||| || ||||| || |||||||||||||| || ||||| |
Sbjct 512 AGATGACTCAGATCATGTTTGAAACCTTTAACGCTCCGGCTATGTATGTCGCCATTCAAG 571
Query 419 CTGTTCTTTCTCTTTATGCCAGTGGTCGTACAACTGGTATTGTGCTTGACTCTGGAGATG 478
|||| || || |||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct 572 CTGTCCTGTCGCTTTATGCTAGTGGTCGTACTACTGGTATTGTGCTTGACTCTGGAGATG 631
Query 479 GTGTGAGCCACACTGTTCCTATCTATGAGGGTTATGCCCTTCCACATGCGATCCTACGTC 538
||||||| ||||| || ||||||||||||||||| || || || ||||| ||||||||||
Sbjct 632 GTGTGAGTCACACGGTCCCTATCTATGAGGGTTACGCTCTCCCGCATGCAATCCTACGTC 691
Query 539 TTGATCTTGCTGGTCGTGACCTCACGGATGCGCTGATGAAGATCCTAACTGAGCGTGGTT 598
|||||||||| |||||||||||||| ||||| |||||||||||||| |||||||||||||
Sbjct 692 TTGATCTTGCAGGTCGTGACCTCACAGATGCTCTGATGAAGATCCTCACTGAGCGTGGTT 751
Query 599 ACTCTTTCACCACCACAGCAGAGCGTGAAATTGTCAGAGACATAAAGGAGAAGCTTTGCT 658
||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct 752 ACTCTTTCACCACAACAGCTGAGCGTGAAATTGTCAGAGACATCAAGGAGAAGCTTTGCT 811
Query 659 ACATTGCTCTTGACTACGAGCAGGAGCTCGAGACAGCCAAAACCAGCTCAGCTGTTGAGA 718
|||||||||||||||| ||||||||||| ||||| || ||||||||||| |||| ||||
Sbjct 812 ACATTGCTCTTGACTATGAGCAGGAGCTTGAGACGGCTAAAACCAGCTCTTCTGTAGAGA 871
Query 719 AGAACTACGAGCTACCTGATGGGCAAGTGATCACCATTGGATCAGAGCGATTCCGTTGCC 778
||||||| ||| ||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 872 AGAACTATGAGTTACCTGATGGGCAAGTGATCACCATTGGATCTGAGCGTTTCCGTTGCC 931
Query 779 CAGAG 783
| |||
Sbjct 932 CTGAG 936
Score = 488 bits (264), Expect = 4e-137
Identities = 302/321 (94%), Gaps = 0/321 (0%)
Strand=Plus/Plus
Query 781 GAGAATGCTGGTATCCATGAAACCACCTATAACTCCATAATGAAGTGTGATGTCGACATC 840
||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||
Sbjct 967 GAGAATGCTGGTATCCATGAAACCACCTACAACTCCATAATGAAATGTGATGTTGACATC 1026
Query 841 AGAAAGGACTTGTACGGTAACATTGTGCTCAGTGGTGGAACCACAATGTTCCCAGGAATC 900
|||||||||||||| |||||||||||||||||||||||||| || |||||||| |||||
Sbjct 1027 AGAAAGGACTTGTATGGTAACATTGTGCTCAGTGGTGGAACAACTATGTTCCCTGGAATT 1086
Query 901 GCCGACAGAATGAGCAAAGAAATCACTGCTTTGGCTCCAAGCAGCATGAAGATCAAAGTC 960
|| ||||||||||||||||| |||||||||||||| || |||||||||||||||||||||
Sbjct 1087 GCTGACAGAATGAGCAAAGAGATCACTGCTTTGGCACCGAGCAGCATGAAGATCAAAGTC 1146
Query 961 GTTGCCCCTCCAGAGAGGAAATACTCCGTCTGGATTGGAGGGTCTATCTTGGCCTCCCTC 1020
||||| ||||| |||||||||||||| |||||||||||||| || |||||||||||||||
Sbjct 1147 GTTGCACCTCCTGAGAGGAAATACTCTGTCTGGATTGGAGGATCCATCTTGGCCTCCCTC 1206
Query 1021 AGTACCTTCCAGCAGATGTGGATCGCAAAGGCAGAATATGATGAGTCAGGCCCGTCGATT 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1207 AGTACCTTCCAGCAGATGTGGATCGCAAAGGCAGAATATGATGAGTCAGGCCCGTCGATT 1266
Query 1081 GTTCACAGGAAATGCTTCTGA 1101
|||||| |||||||||| |||
Sbjct 1267 GTTCACCGGAAATGCTTTTGA 1287
> AT5G59370.1 | Symbols: ACT4 | actin 4 | chr5:23949739-23951837
FORWARD LENGTH=1544
Length=1544
Score = 785 bits (425), Expect = 0.0
Identities = 665/781 (85%), Gaps = 16/781 (2%)
Strand=Plus/Plus
Query 1 ATGGCTGATGGTGAAGACATTCAACCTCTTGTTTGCGACAATGGAACTGGAATGGTTAAG 60
||||| || ||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 160 ATGGCGGACGGTGAAGACATTCAACCGCTTGTTTGTGACAATGGAACTGGAATGGTTAAG 219
Query 61 GCTGGTTTTGCTGGG-GATGATGCACCTCGAGCTGTGTTTCCTAGTATTGTGGGTCGTCC 119
|| || || || ||| || |||||||| |||| || ||||| || ||||| || |||||
Sbjct 220 GCCGGATTCGC-GGGTGACGATGCACCAAGAGCGGTTTTTCCGAGCATTGTAGGCCGTCC 278
Query 120 TCGTCACACCGGTGTGATGGTTGGGATGGGGCAAAAGGATGCTTATGTTGGCGATGAAGC 179
||| ||||| ||||||||||| |||||||| |||||||||||||||||||| || || ||
Sbjct 279 TCGCCACACGGGTGTGATGGTAGGGATGGGACAAAAGGATGCTTATGTTGGAGACGAGGC 338
Query 180 TCAATCCAAACGAGGTATTTTAACTCTCAAGTACCCTATTGAGCATGGGATTGTTAACAA 239
|||||| ||||| ||||| || ||||| |||||||| ||||||||||| |||||||| ||
Sbjct 339 TCAATCAAAACGTGGTATCTTGACTCTGAAGTACCCAATTGAGCATGGAATTGTTAATAA 398
Query 240 TTGGGATGATATGGAGAAGATTTGGCATCACACTTTCTATAATGAGCTACGTGTTGCTCC 299
||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||| ||
Sbjct 399 TTGGGATGACATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTTCGTGTTGCCCC 458
Query 300 TGAGGAGCATCCGATTTTACTT-ACCGAGGCACCGCTTAACCCGAAAGCTAATCGTGAGA 358
||| || |||||| || | ||| ||||| || || || || ||||||||||| |||||||
Sbjct 459 TGAAGAACATCCGGTTCT-CTTGACCGAAGCTCCTCTCAATCCGAAAGCTAACCGTGAGA 517
Query 359 AGATGACTCAAATCATGTTTGAGACTTTTAATGCCCCGGCTATGTATGTGGCTATTCAGG 418
|||||||||| |||||||||||||| || ||| | || ||||||||||| || ||||| |
Sbjct 518 AGATGACTCAGATCATGTTTGAGACATTCAATACTCCTGCTATGTATGTTGCCATTCAAG 577
Query 419 CTGTTCTTTCTCTTTATGCCAGTGGTCGTACAACTGGTATTGTGCTTG-ACTCTGGAGAT 477
||||||| || || ||||||||||| ||||||||||||||||| ||| |||||||||||
Sbjct 578 CTGTTCTCTCACTCTATGCCAGTGGCCGTACAACTGGTATTGTT-TTGGACTCTGGAGAT 636
Query 478 GGTGTGAGCCACACTGTTCCTATCTATGAGGGTTATGCCCTTCCACATGCGATCCTACGT 537
|||||||||||||| || || ||||| |||||||| || || ||||| || |||||||||
Sbjct 637 GGTGTGAGCCACACGGTACCAATCTACGAGGGTTACGCTCTCCCACACGCAATCCTACGT 696
Query 538 CTTGATCTTGCTGGTCGTGACCTCACGGATGCGC-TGATGAAGATCCTAACTGAGCGTGG 596
||||| || || ||||||||||||||||| | | | ||||| ||||| || ||||||||
Sbjct 697 CTTGACCTAGCAGGTCGTGACCTCACGGAC-CACCTCATGAAAATCCTCACAGAGCGTGG 755
Query 597 TTACTCTTTCACCACCACAGCAGAGCGTGAAATTGTCAGAGACAT-AAAGGAGAAGCTTT 655
||||| |||||||| || || || ||||||||||| |||||||| |||| ||||||| |
Sbjct 756 ATACTCCTTCACCACAACTGCTGAACGTGAAATTGTTAGAGACATGAAAG-AGAAGCTCT 814
Query 656 GCT-ACATTGCTCTTGACTACGAGCAGGAGCTCGAGACAGCCAAAACCAGCTCAG-CTGT 713
|| |||||||||| |||| |||||| ||||| ||||| ||||||| ||||| | | ||
Sbjct 815 -CTTACATTGCTCTAGACTTCGAGCAAGAGCTAGAGACTTCCAAAACAAGCTC-GTCCGT 872
Query 714 TGAGAAGAA-CTACGAGCTACCTGATGGGCAAGTGATCACCATTGGATCAGAGCGATTCC 772
|||||| || || |||||| |||||||| |||||||| ||||||||| ||||| | ||||
Sbjct 873 TGAGAA-AAGCTTCGAGCTTCCTGATGGACAAGTGATAACCATTGGAGCAGAGAGGTTCC 931
Query 773 G 773
|
Sbjct 932 G 932
> AT3G46520.1 | Symbols: ACT12 | actin-12 | chr3:17128263-17130210
FORWARD LENGTH=1453
Length=1453
Score = 741 bits (401), Expect = 0.0
Identities = 653/777 (84%), Gaps = 8/777 (1%)
Strand=Plus/Plus
Query 1 ATGGCTGATGGTGAAGACATTCAACCTCTTGTTTGCGACAATGGAACTGGAATGGTTAAG 60
||||| || |||||||| ||||| || || |||||||| || || ||||||||||| |||
Sbjct 91 ATGGCGGACGGTGAAGATATTCAGCCGCTCGTTTGCGATAACGGGACTGGAATGGTCAAG 150
Query 61 GCTGGTTTTGCTGGGGATGATGCACCTCGAGCTGTGTTTCCTAGTATTGTGGGTCGTCCT 120
||||||||||| || |||||||| ||| ||||||| || || ||||| || || |||||
Sbjct 151 GCTGGTTTTGCAGGTGATGATGCTCCTAGAGCTGTATTCCCAAGTATCGTTGGCCGTCCA 210
Query 121 CGTCACACCGGTGTGATGGTTGGGATGGGGCAAAAGGATGCTTATGTTGGCGATGAAGCT 180
|||||||| || ||||||||||| ||||| ||||||||||| || || || || || ||
Sbjct 211 CGTCACACGGGAGTGATGGTTGGAATGGGACAAAAGGATGCATACGTCGGAGACGAGGCA 270
Query 181 CAATCCAAACGAGGTATTTTAACTCTCAAGTACCCTATTGAGCATGGGATTGTTAACAAT 240
|| || ||||| ||||| || ||||||||||| || ||||||||||| ||||| |||||
Sbjct 271 CAGTCGAAACGTGGTATCTTGACTCTCAAGTATCCAATTGAGCATGGTATTGTCAACAAC 330
Query 241 TGGGATGATATGGAGAAGATTTGGCATCACACTTTCTATAATGAGCTACGTGTTGCTCCT 300
|||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||
Sbjct 331 TGGGATGATATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTGCGTGTTGCCCCG 390
Query 301 GAGGAGCATCCGATTTTACTTACCGAGGCACCGCTTAACCCGAAAGCTAATCGTGAGAAG 360
|| ||||||||| |||| || ||||| || |||||||| ||||| ||||| |||||||||
Sbjct 391 GAAGAGCATCCGGTTTTGCTAACCGAAGCGCCGCTTAATCCGAAGGCTAACCGTGAGAAG 450
Query 361 ATGACTCAAATCATGTTTGAGACTTTTAATGCCCCGGCTATGTATGTGGCTATTCAGGCT 420
||||| || ||||||||||| || || || | || ||||||||||| || ||||| |||
Sbjct 451 ATGACACAGATCATGTTTGAAACATTCAACACTCCTGCTATGTATGTTGCCATTCAAGCT 510
Query 421 GTTCTTTCTCTTTATGCCAGTGGTCGTACAACTGGTATTGTGCTTG-ACTCTGGAGATGG 479
||||| || || ||||| ||||| ||||| ||||||||||| ||| |||||||||||||
Sbjct 511 GTTCTCTCCCTCTATGCTAGTGGCCGTACTACTGGTATTGTT-TTGGACTCTGGAGATGG 569
Query 480 TGTGAGCCACACTGTTCCTATCTATGAGGGTTATGCCCTTCCACATGCGATCCTACGTCT 539
|||||||||||| || || ||||| ||||||||||| |||||||| || ||||| |||||
Sbjct 570 TGTGAGCCACACGGTACCAATCTACGAGGGTTATGCACTTCCACACGCAATCCTGCGTCT 629
Query 540 TGATCTTGCTGGTCGTGACCTCACGGATGCGC-TGATGAAGATCCTAACTGAGCGTGGTT 598
||||||||| ||||||||||| || || | | | ||||| ||||| || ||||||||||
Sbjct 630 TGATCTTGCAGGTCGTGACCTAACCGAC-CACCTCATGAAAATCCTGACAGAGCGTGGTT 688
Query 599 ACTCTTTCACCACCACAGCAGAGCGTGAAATTGTCAGAGACATAAAGGAGAAGCTTT-GC 657
|||| |||||||| || || |||||||| |||||||||||||| ||||||||||| | |
Sbjct 689 ACTCATTCACCACAACTGCTGAGCGTGAGATTGTCAGAGACATGAAGGAGAAGCTCTCG- 747
Query 658 TACATTGCTCTTG-ACTACGAGCAGGAGCTCGAGACAGCCAAAACCAGCTCAGCTGTTGA 716
|||||||| |||| |||| ||||| ||||| ||||| |||||||||||||| |||| ||
Sbjct 748 TACATTGC-CTTGGACTATGAGCAAGAGCTTGAGACTTCCAAAACCAGCTCATCTGTGGA 806
Query 717 GAAGAACTACGAGCTACCTGATGGGCAAGTGATCACCATTGGATCAGAGCGATTCCG 773
||||| || |||||| || || || |||||||| ||||| || ||||||| |||||
Sbjct 807 GAAGAGCTTCGAGCTGCCAGACGGTCAAGTGATAACCATCGGGGCAGAGCGTTTCCG 863
> AT3G12110.1 | Symbols: ACT11 | actin-11 | chr3:3857843-3859798
FORWARD LENGTH=1434
Length=1434
Score = 715 bits (387), Expect = 0.0
Identities = 661/793 (83%), Gaps = 20/793 (3%)
Strand=Plus/Plus
Query 1 ATGGCTGATGGTGAAGACATTCAACCTCTTGTTTGCGACAATGGAACTGGAATGGTTAAG 60
||||| ||||||||||||||||| ||||| || || ||||||||||| ||||||||||||
Sbjct 112 ATGGCAGATGGTGAAGACATTCAGCCTCTCGTCTGTGACAATGGAACCGGAATGGTTAAG 171
Query 61 GCTGGTTTTGCTGGGGATGATGCACCTCGAGCTGTGTTTCCTAGTATTGTGGGTCGTCCT 120
||||| |||||||| ||||||||||| ||||||| || ||||| || || |||||||||
Sbjct 172 GCTGGATTTGCTGGAGATGATGCACCAAGAGCTGTATTCCCTAGCATCGTTGGTCGTCCT 231
Query 121 CGTCACACCGGTGTGATGGTTGGGATGGGGCAAAAGGATGCTTATGTTGGCGATGAAGCT 180
|| ||||| ||||| |||||||| ||||| ||||| |||||||| ||||| ||||| |||
Sbjct 232 CGACACACTGGTGTCATGGTTGGTATGGGACAAAAAGATGCTTACGTTGGTGATGAGGCT 291
Query 181 CAATCCAA-ACGAGGTATTTTAAC-TCTCAAGTACCCTATTGAGCATGGGATTGTTAACA 238
|| || || | |||||||||| || | | || || |||||||||||||| ||||||| ||
Sbjct 292 CAGTCTAAGA-GAGGTATTTTGACAT-TGAAATATCCTATTGAGCATGGTATTGTTAGCA 349
Query 239 ATTGGGATGATATGGAGAAGATTTGGCATCACACTTTCTATAATGAGCTACGTGTTGCTC 298
| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |
Sbjct 350 ACTGGGATGATATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTCCGTGTTGCAC 409
Query 299 CTGAGGAGCATCC-GATT-TTACTTACCGAGGCACCGCTTAACCCGAAAGCTAATCGTGA 356
|||| || || || | || || || || ||||| || || ||||| || || ||||||||
Sbjct 410 CTGAAGAACACCCTG-TTCTT-CTCACTGAGGCTCCTCTCAACCCCAAGGCCAATCGTGA 467
Query 357 GAAGATGACTCAAATCATGTTTGAGACTTTTAATGCCCCGGCTATGTATGTGGCTATTCA 416
||| |||||||| || |||||||| ||||| || | || || |||||||| ||||| ||
Sbjct 468 GAAAATGACTCAGATTATGTTTGAAACTTTCAACACTCCTGCCATGTATGTCGCTATCCA 527
Query 417 GGCTGTTCTTTCTCTTTATGCCAGTGGTCGTACAACTGGTATTGTGCTTG-ACTCTGGAG 475
||||||||||| || || || ||||||||||| |||||||||||| ||| |||||||||
Sbjct 528 AGCTGTTCTTTCCCTCTACGCTAGTGGTCGTACTACTGGTATTGTG-TTGGACTCTGGAG 586
Query 476 ATGGTGTGAGCCACACTGTTCCTATCTATGAGGGTTATGCCCTTCCACATGCGATCCTAC 535
|||||||||| ||||||||||| || ||||| || ||||| ||||||||||| || || |
Sbjct 587 ATGGTGTGAGTCACACTGTTCCAATTTATGAAGGATATGCTCTTCCACATGCTATTCTGC 646
Query 536 GTCTTG-ATCTTGCTGGTCGTGACCTCACGGATG-CGCTGATGAAGATCCTAACTGAGCG 593
|| ||| | ||||| || |||||||| || ||| | || ||||||||| |||| |||||
Sbjct 647 GT-TTGGACCTTGCAGGCCGTGACCTTACTGATTAC-CTCATGAAGATCTTAACCGAGCG 704
Query 594 TGGTTACTCTTTCACCACCACAGCAGAGCGTGAAATTGTCAGAGACAT-AAAGGAGAAGC 652
||||||||| ||||| ||| |||||||||||||||| || || || | |||| |||| |
Sbjct 705 TGGTTACTCATTCACTACCTCAGCAGAGCGTGAAATCGTAAGGGATGTGAAAG-AGAAAC 763
Query 653 TTTGCT-ACATTGCTCTTGACTACGAGCAGGAGCTCGAGACAGCCAAA-ACCAGCTCAGC 710
|| ||| |||| || |||||||||||||| ||| | || ||||| ||| || |||||| |
Sbjct 764 TT-GCTTACATAGCACTTGACTACGAGCAAGAGATGGAAACAGC-AAACACAAGCTCATC 821
Query 711 TGTTGAGAAGAACTACGAGCTACCTGATGGGCAAGTGATCACCATTGGATCAGAGCGATT 770
|||||||||| ||| ||| | |||||||| || ||||||||||||||| |||| ||||
Sbjct 822 CGTTGAGAAGAGCTATGAGTTGCCTGATGGACAGGTGATCACCATTGGAGGAGAGAGATT 881
Query 771 CCGTTGCCCAGAG 783
||| ||||| |||
Sbjct 882 CCGCTGCCCGGAG 894
Score = 320 bits (173), Expect = 2e-86
Identities = 269/316 (85%), Gaps = 4/316 (1%)
Strand=Plus/Plus
Query 786 TGCTGGTATCCATGAAACCACCTATAACTCCATAATGAAGTGTGATGTCGACATCAGAAA 845
||||||||| || || ||||| || || ||||| |||||||||||||| || ||||| ||
Sbjct 930 TGCTGGTATTCACGAGACCACTTACAATTCCATCATGAAGTGTGATGTGGATATCAGGAA 989
Query 846 GGACT-TGTACGGTAACATTGTGCTCAGTGGTGGAACCACAATGTTCCCAGGAATCGCCG 904
||| | |||| || |||||||||||||||||||||||||| |||||||| ||||| || |
Sbjct 990 GGA-TCTGTATGGAAACATTGTGCTCAGTGGTGGAACCACCATGTTCCCTGGAATTGCTG 1048
Query 905 ACAGAATGAGCAAAGAAATCACTGCTTTGGCTCCAAGCAGCATGAAGATCAAAGTCGTTG 964
| || ||||||||||| |||||||||||||||||||||||||||||||| || || ||||
Sbjct 1049 ATAGGATGAGCAAAGAGATCACTGCTTTGGCTCCAAGCAGCATGAAGATTAAGGTGGTTG 1108
Query 965 CCCCTCCAGAGAGGAAATACTCCGTCTGGATTGGAGGGTCTAT-CTTGGCCTCCCTCAGT 1023
| || ||||||||||| ||| |||||||||||||| || || || | | || ||||||
Sbjct 1109 CTCCACCAGAGAGGAAGTACAGTGTCTGGATTGGAGGCTCCATTCTAG-CATCACTCAGT 1167
Query 1024 ACCTTCCAGCAGATGTGGATCGCAAAGGCAGAATATGATGAGTCAGGCCCGTCGATTGTT 1083
|||||||| ||||||||||| |||||||| || |||||||||||||| || || || ||
Sbjct 1168 ACCTTCCAACAGATGTGGATAGCAAAGGCCGAGTATGATGAGTCAGGGCCATCAATAGTC 1227
Query 1084 CACAGGAAATGCTTCT 1099
|||||||| |||||||
Sbjct 1228 CACAGGAAGTGCTTCT 1243
> AT1G49240.1 | Symbols: ACT8 | actin 8 | chr1:18215872-18218313
FORWARD LENGTH=1707
Length=1707
Score = 669 bits (362), Expect = 0.0
Identities = 656/796 (82%), Gaps = 28/796 (4%)
Strand=Plus/Plus
Query 1 ATGGCTGATGGTGAAGACATTCAACCTCTTGTTTGCGACAATGGAACTGGAATGGTTAAG 60
||||| |||| ||| |||||||||||| |||| || |||||||| |||||||||||||||
Sbjct 208 ATGGCCGATGCTGATGACATTCAACCTATTGTCTGTGACAATGGTACTGGAATGGTTAAG 267
Query 61 GCTGGTTTTGCTGGGGATGATGCACCTC-GAGCTGTGTTT-CCTAGTATTGTGGGTCGTC 118
||||| || ||||| |||||||| || | |||| || ||| || ||| |||| ||||| |
Sbjct 268 GCTGGATTCGCTGGAGATGATGCTCC-CAGAGCGGT-TTTCCCCAGTGTTGTTGGTCGAC 325
Query 119 CTCGTCA-CACCGGTGTGATGGTTGGGATGGGGCA-AAAGGATGCTTATGTTGGCGATGA 176
|| | || || ||||| |||||||||||| || ||| ||||| |||||||| |||||
Sbjct 326 CTAGACATCA-TGGTGTCATGGTTGGGATGAATCAGAAA-GATGCGTATGTTGGTGATGA 383
Query 177 AGCTCAATCCAAACGAGGTATTTTAAC-TCTCAAGTACCCTATTGAGCATGG-GATTGTT 234
||| ||||||||| ||||||| | || | | || ||||||||||||||||| | |||||
Sbjct 384 AGCACAATCCAAAAGAGGTATCCTCACAT-TGAAATACCCTATTGAGCATGGTG-TTGTT 441
Query 235 AACAATTGGGATGATATGGAGAAGATTTGGCATCACACTTTCTATAATGAGCTACGTGTT 294
| ||| |||||||| ||||||||||||||||||||||||||||| |||||||| ||| ||
Sbjct 442 AGCAACTGGGATGACATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTCCGTATT 501
Query 295 GCTCCTGAGGAGCATCCGATTTTACTTACCGAGGCACCGCTTAACCCGAAAGCTAATC-G 353
|||||||| ||||| ||| || ||||||||||||| || |||||||| ||||| || | |
Sbjct 502 GCTCCTGAAGAGCACCCGGTTCTACTTACCGAGGCTCCTCTTAACCCAAAAGCCAA-CAG 560
Query 354 TGAGAAGATGACTCAAATCATGTTTGAGACTTTTAATGCCCCGGCTATGTATGTGGCTAT 413
|||||||||||||| |||||||||||||| |||||| | || ||||||||||| || ||
Sbjct 561 AGAGAAGATGACTCAGATCATGTTTGAGACCTTTAATTCTCCAGCTATGTATGTTGCCAT 620
Query 414 TCAGGCTGTTCTTTCTCTTTATGCCAGTGGTCGTACAACTGGTATTGTGCTTG-ACTCTG 472
||| |||||||| || ||||| ||||||||||||||||| ||||||||| ||| ||||||
Sbjct 621 TCAAGCTGTTCTATCACTTTACGCCAGTGGTCGTACAACCGGTATTGTG-TTGGACTCTG 679
Query 473 GAGATGGTGTGAGC-CACACTGTTCCTATCTATGAGGGTTATGC-C-CTTCCACATGCGA 529
| ||||||||| | |||||||| |||||||| ||||||| | | | ||||||||||| |
Sbjct 680 GTGATGGTGTGT-CTCACACTGTGCCTATCTACGAGGGTT-T-CTCACTTCCACATGCTA 736
Query 530 TCCTACGTCTTGATCTTGCTGGTCGTGACCTCACGGATG-CGCTGATGAAGATCCTAACT 588
|||| ||||| || ||||||||||||||||| || ||| | || ||||||||||| ||
Sbjct 737 TCCTCCGTCTCGACCTTGCTGGTCGTGACCTTACTGATTAC-CTCATGAAGATCCTTACC 795
Query 589 GAGCGTGGTTAC-TCTTTCACCACCACAGCAGAGCGTGAAATTGTCAGAGACATAAAGGA 647
||| | |||||| | || |||||| |||||||| || |||||||| |||||||| |||||
Sbjct 796 GAGAGAGGTTACATGTT-CACCACAACAGCAGAACGGGAAATTGTGAGAGACATCAAGGA 854
Query 648 GAAGCTTTGCTACATTGCTCTTGACTACGAGCAGGAGCTCGAGACAGCCAAAACCAGCTC 707
|||||||| || | ||| | ||||||||||| ||| | ||||| | |||||||||||
Sbjct 855 GAAGCTTTCCTTTGTCGCTGTCGACTACGAGCAAGAGATGGAGACCTCGAAAACCAGCTC 914
Query 708 AGCTGTTGAGAAGAACTACGAGCTACCTGATGGGCAAGTGATCACCATTGGAT-CAGAGC 766
| | || |||||||| || |||| || || ||||||||||| || || | | |||
Sbjct 915 CTCCATCGAAAAGAACTATGAATTACCCGACGGACAAGTGATCACGATCGG-TGCTGAGA 973
Query 767 GATTCCGTTGCCCAGA 782
||||| | ||||||||
Sbjct 974 GATTCAGGTGCCCAGA 989
> AT3G18780.2 | Symbols: ACT2, DER1, LSR2, ENL2 | actin 2 | chr3:6474842-6477204
FORWARD LENGTH=1756
Length=1756
Score = 619 bits (335), Expect = 1e-176
Identities = 653/802 (81%), Gaps = 40/802 (5%)
Strand=Plus/Plus
Query 1 ATGGCTGATGG-TGAAGACATTCAACCTCTTGTTTGCGACAATGGAACTGGAATGGTTAA 59
|||||||| || ||| || |||||||| | || || |||||||| || || ||||| ||
Sbjct 251 ATGGCTGA-GGCTGATGATATTCAACCAATCGTGTGTGACAATGGTACCGGTATGGTGAA 309
Query 60 GGCTGGTTTTGCTGGGGATGATGCACCTC-GAGCTGTGTTTCCTAGTATTGTGGGTCGTC 118
|||||| ||||| || |||||||| || | | ||||| ||||| ||| |||| ||| | |
Sbjct 310 GGCTGGATTTGCAGGAGATGATGCTCC-CAGGGCTGTTTTTCCCAGTGTTGTTGGTAGGC 368
Query 119 CTCGTCA-CACCGGTGTGATGGTTGGGATGGGGCAAAAGGATGCTTATGTTGGCGATGAA 177
| | || || ||||| |||||||||||| || |||||||| |||||||| ||||||
Sbjct 369 CAAGACATCA-TGGTGTCATGGTTGGGATGAACCAGAAGGATGCATATGTTGGTGATGAA 427
Query 178 GCTCAATCCAA-ACGAGGTATT-TTAACTCTCAAGTACCCTATTGAGCATGG-GATTGTT 234
|| |||||||| | |||||||| ||| || | ||||| |||||||||||||| | |||||
Sbjct 428 GCACAATCCAAGA-GAGGTATTCTTACCT-TGAAGTATCCTATTGAGCATGGTG-TTGTT 484
Query 235 AACAATTGGGATGATATGGAGAAGATTTGGCATCACACTTTCTATAATGAGCTACGTGTT 294
| ||| |||||||||||||| ||||| ||||||||||||||||| |||||||| ||| ||
Sbjct 485 AGCAACTGGGATGATATGGAAAAGATCTGGCATCACACTTTCTACAATGAGCTTCGTATT 544
Query 295 GCTCCTGAGGAGCATCC-GATT-TTACTTACCGAGGCACCGCTTAACCCGAAA-GCTAAT 351
|||||||| ||||| || | || || ||||||||||| || |||||||| ||| || ||
Sbjct 545 GCTCCTGAAGAGCACCCTG-TTCTT-CTTACCGAGGCTCCTCTTAACCC-AAAGGCCAA- 600
Query 352 C-GTGAGAAGATGACTCAAATCATGTTTGAGACTTTTAA-TGC-CCCGGCTATGTATGTG 408
| | ||||||||||||||||||||||||||||| ||||| | | |||| ||||||||||
Sbjct 601 CAGAGAGAAGATGACTCAAATCATGTTTGAGACCTTTAACT-CTCCCG-CTATGTATGTC 658
Query 409 GCTATTCAGGCTGTTCTTTCTCTT-TATGCCAGTGGTCGTACAACTGGTATTGTGCTTGA 467
|| || || |||||||| || ||| || ||||||||||||||||| ||||||||||| ||
Sbjct 659 GCCATCCAAGCTGTTCTCTC-CTTGTACGCCAGTGGTCGTACAACCGGTATTGTGCTGGA 717
Query 468 CTCTGGAGATGGTGTGAGC-CACACTGTTCCTATCTATGAGGGTTATGC-C-CTTCCACA 524
||||| ||||||||| | |||||||| || ||||| ||||||| | | | ||||| ||
Sbjct 718 TTCTGGTGATGGTGTGT-CTCACACTGTGCCAATCTACGAGGGTT-T-CTCTCTTCCTCA 774
Query 525 TGCGATCCTACGTCTTGATCTTGCTGGTCGTGACCTCACGGATG-CGCTGATGAAGATCC 583
||| ||||| |||||||| |||||||| |||||||| || ||| | || ||||||||||
Sbjct 775 TGCCATCCTCCGTCTTGACCTTGCTGGACGTGACCTTACTGATTAC-CTCATGAAGATCC 833
Query 584 TAACTGAGCGTGGTTAC-TCTTTCACCACCACAGCAGAGCGTGAAATTGTCAGAGACATA 642
| || ||| | |||||| | || |||||| ||||||||||| |||||||| ||||||||
Sbjct 834 TTACAGAGAGAGGTTACATGTT-CACCACAACAGCAGAGCGGGAAATTGTAAGAGACATC 892
Query 643 AAGGAGAAGCTTTGCTACATTGCTCTTGACTACGAGCAGGAGCTCGAGACAGCCAAA-AC 701
||||||||||| | || ||||| ||||||||||||||||| | || || | ||| ||
Sbjct 893 AAGGAGAAGCTCTCCTTTGTTGCTGTTGACTACGAGCAGGAGATGGAAACCTC-AAAGAC 951
Query 702 CAGCTCAGCTGTTGAGAAGAACTACGAGCTACCTGATGGGCAAGTGATCACCATTGGAT- 760
|||||| | | ||||||||||| || |||| ||||||||||| ||||| ||||| |
Sbjct 952 CAGCTCTTCCATCGAGAAGAACTATGAATTACCCGATGGGCAAGTCATCACGATTGG-TG 1010
Query 761 CAGAGCGATTCCGTTGCCCAGA 782
| ||| ||||| | ||||||||
Sbjct 1011 CTGAGAGATTCAGATGCCCAGA 1032
Score = 281 bits (152), Expect = 8e-75
Identities = 265/319 (83%), Gaps = 10/319 (3%)
Strand=Plus/Plus
Query 786 TGCTGGTATCCATGAAACCACCTATAACTCCATAATGAAGTGTGATGTCGACATCAGAAA 845
|||||| ||||| || || ||||||||||| || |||||||||||||| || ||||| ||
Sbjct 1069 TGCTGGAATCCACGAGACAACCTATAACTCAATCATGAAGTGTGATGTGGATATCAGGAA 1128
Query 846 GGACT-TGTACGGTAACATTGTGCTCAGTGGTGGAACCACAATGTTCCCAGGAATCGCCG 904
||| | |||||||||||||||||||||||||||||||||| |||||| |||| ||||| |
Sbjct 1129 GGA-TCTGTACGGTAACATTGTGCTCAGTGGTGGAACCACTATGTTCTCAGGTATCGCTG 1187
Query 905 ACAGAATGAGCAAAGAAATCACTGCT-TTGGCTCCAAGCAGCATGAAGATCAAAGTCGTT 963
|| | ||||||||||||||||| || ||| | ||||||||||||||||| || ||||||
Sbjct 1188 ACCGTATGAGCAAAGAAATCACAGCACTTG-CACCAAGCAGCATGAAGATTAAGGTCGTT 1246
Query 964 GCCCCTCCAGAGAGGAAATACTCCGTCTGGATTGGAGGGTCTAT-CTTGGCCTCCCTCAG 1022
|| || || || ||||| ||| |||||||| || || || || |||| | ||||||||
Sbjct 1247 GCACCACCTGAAAGGAAGTACAGTGTCTGGATCGGTGGTTCCATTCTTG-CTTCCCTCAG 1305
Query 1023 TACCTTCCAGCAGATGTGGATCGCAAAGGCAGAATATGATGAGTCAGGCCC-GTCGATT- 1080
|| |||||||||||||||||| | ||||| || ||||||||| |||| || | || |
Sbjct 1306 CACATTCCAGCAGATGTGGATCTCCAAGGCCGAGTATGATGAGGCAGGTCCAG--GAATC 1363
Query 1081 GTTCACAGGAAATGCTTCT 1099
|||||||| ||||| ||||
Sbjct 1364 GTTCACAGAAAATGTTTCT 1382
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 53965585875
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5