BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg321523
Length=2490
Score E
Sequences producing significant alignments: (Bits) Value
AT2G38185.4 | Symbols: | RING/U-box superfamily protein | chr2... 1751 0.0
AT2G38195.1 | Symbols: | RING/U-box superfamily protein | chr2... 959 0.0
AT2G38220.1 | Symbols: | RING/U-box superfamily protein | chr2... 909 0.0
> AT2G38185.4 | Symbols: | RING/U-box superfamily protein | chr2:15999926-16003168
FORWARD LENGTH=1946
Length=1946
Score = 1751 bits (948), Expect = 0.0
Identities = 1224/1349 (91%), Gaps = 52/1349 (4%)
Strand=Plus/Plus
Query 1 ATGGACTCAGCTCCTTCTCCATCATCGCCGGACCTTGAATCATCTCCTCCGGTATTGGTC 60
||||| |||||||||||||||||||| | |||| |||||| ||||||||||||||||||
Sbjct 134 ATGGATTCAGCTCCTTCTCCATCATCTCTGGACTTTGAATTATCTCCTCCGGTATTGGTT 193
Query 61 ACAATGAATTCAACCTCATCTTCTTCTGATAATAACGTCGAAGGAGATGATGATGATGCT 120
||||||| ||||||||||||||| || | ||||||||||||||| |||||||||||||
Sbjct 194 ACAATGACTTCAACCTCATCTTCGGCTTCTGATAACGTCGAAGGAGCTGATGATGATGCT 253
Query 121 GCTAATCATGAGATTTTCAATTGGAGAGAATTTTCCTCTTGTTGGAGAGTTTCAGAGTCG 180
|| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 254 AATACTCATGGGATTTTCAATTGGAGAGATTTTTCCTCTTGTTGGAGAGTTTCAGAGTCG 313
Query 181 AACTTGTACTGCTTTAGTTTGGCTCTTCTTGTCTGGTTCTTTGCTTCGTTTATTCTGATT 240
|||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct 314 AACTTGTACTGCTTCAGTTTAGCTCTTCTTATCTGGTTCTTTGCTTCGTTTATTCTGATT 373
Query 241 GAGAATCTTTACGGACCAAAAAGTGTCTGGCTTGGACCCAATTCTTCCATTCTCGTTGAA 300
|||||||||||||||||||||| ||||||||||||||||| ||| || ||||| ||||||
Sbjct 374 GAGAATCTTTACGGACCAAAAAATGTCTGGCTTGGACCCAGTTCGTCAATTCTTGTTGAA 433
Query 301 CCAAGCTCCATTTTTGTCAAAAGCATTAAGGTTGTTAAAGTG-TTAGATTATTCTA-AAC 358
|||||||| |||||||||||||||||||| | ||||||||| || ||||| || | |||
Sbjct 434 CCAAGCTCTATTTTTGTCAAAAGCATTAA-G--GTTAAAGTGCTT-GATTACTC-AGAAC 488
Query 359 CAGGGCTTCAG-TTATATGGGTTCTATAGATCTCCTGCTCTGGATTGTTTCGTCAATTGG 417
||||||||||| || ||||||||||||||| ||||||||||||||||||| ||||| |||
Sbjct 489 CAGGGCTTCAGCTT-TATGGGTTCTATAGAACTCCTGCTCTGGATTGTTTTGTCAACTGG 547
Query 418 TCGGAATCCCGAGTG---T-TA---C-C-TG-----T-------ATGGCCATATTATCTC 456
|| |||||||||||| | || | | || | ||||||||||||||||
Sbjct 548 TCTGAATCCCGAGTGTTATCTATCTCACATGAATCTTACAAGGGATGGCCATATTATCTC 607
Query 457 AACAGACGGACTTTGTTGAATATTACATATACCGTTAAACCACAAGGTTCTGCGGTTCAG 516
||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 608 AACAGTGGGTCATTGTTGAATATTACATATACCGTTAAACCACAAGGTTCTGCGGTTCAG 667
Query 517 CTTGTGGTTGACGAAGGACATCAAGGCGACCCTCAGTCGTTTTTGAACGACCCTGCATAT 576
|||||||| || |||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct 668 CTTGTGGTCGATGAAGGACATCAAGGCGTTCCTCAGTCGGTTTTGAACGACCCTGCATAT 727
Query 577 CGTTACAAAGTTTGGTCATGGAATCTAATTGAGGGGAGTGGTATGATTGAATTGGAGATA 636
|||||||| |||||||| |||||||||||||| ||||||||||||||| |||||||||||
Sbjct 728 CGTTACAATGTTTGGTCGTGGAATCTAATTGAAGGGAGTGGTATGATTCAATTGGAGATA 787
Query 637 AGAAAGTCTTCAAGTTATTATCTTGCTGTAGCTAACTTGAAGA-C---GA---A-A-G-- 685
||||||||||||||||||||||||||||||||||||||||||| | || | | |
Sbjct 788 AGAAAGTCTTCAAGTTATTATCTTGCTGTAGCTAACTTGAAGAGCAAGGACGTAGAGGTA 847
Query 686 A-C-GTA--G---AGGTGGAACTGAATATTGATGTGAAGGCTGTCTTGTATGATACTAAA 738
| | || | | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 848 ACCACTACTGATCAAGTGGAACTGAATATTGATGTGAAGGCTGTCTTGTATGATACTAAA 907
Query 739 CAATCATTCTATAACTGTAACTTCAGCAATGGCGAGTGCACATTCAATGTTATGCCCCTT 798
||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct 908 CAATCATTCTACAACTGTAACTTCAGCAATGGCGAGTGCACATTCAATGCAATGTCCCTT 967
Query 799 GTTGGAAATTCTGTTGTCGTAACTTCACCAGCAGTGAGTCAGGGAGTATCCATTGAAGAT 858
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 968 GTTGGAAATTCTGTTGTCGTAACTTCACCAGCAGCGAGTCAGGGAGTATCCATTGAAGAT 1027
Query 859 GAATGGTATATCAGGTTCTCATATCAACCTAGAGAAATTGCATATGTAATCGGCACAGGT 918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1028 GAATGGTATATCAGGTTCTCATATCAACCTAGAGAAATTGCATATGTAATCGGCACAGGT 1087
Query 919 GTGGTGATTTGCTTCATGTTGGTAGCTATACAATTCTGCAACAGATTACAATGCTA-TGG 977
|||||||||||||||||||||||||||||||| ||||||||||| || || ||| | |||
Sbjct 1088 GTGGTGATTTGCTTCATGTTGGTAGCTATACAGTTCTGCAACAGGTTTCAGTGC-AGTGG 1146
Query 978 TGGAGAGGGACATCTAACCGAGAATGATTCAGGGAGAACACGTCTACTTGAAAACAAAGA 1037
|||||||||||||||||||||| ||||||||| ||||||||||||||||| | |||||||
Sbjct 1147 TGGAGAGGGACATCTAACCGAGGATGATTCAGCGAGAACACGTCTACTTGCAGACAAAGA 1206
Query 1038 TGATGATGGTTCAAGCATGGGTTCATGTAATGATTCTT-TCGCAAACGATGATGCTGATT 1096
||| |||||||||||||||||||| ||| | ||||||| | ||||||||||||||||| |
Sbjct 1207 TGACGATGGTTCAAGCATGGGTTCGTGTGACGATTCTTAT-GCAAACGATGATGCTGACT 1265
Query 1097 TAGAAGAGTTTATGGGAAATGATGGTGAAGCAAGTAACCGAAGTAGACGTCTCTGTGCCA 1156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1266 TAGAAGAGTTTATGGGAAATGATGGTGAAGCAAGTAACCGAAGTAGACGTCTCTGTGCCA 1325
Query 1157 TTTGTTTTGATGCTCCAAGAGATTGCTTTTTCCTCCCATGTGGCCATAGCGTCTCCTGTT 1216
|||||||||||| |||||||||||||||||||||||| ||||| ||| |||||||||||
Sbjct 1326 TTTGTTTTGATGTTCCAAGAGATTGCTTTTTCCTCCCTTGTGGTCATTCCGTCTCCTGTT 1385
Query 1217 ATGAATGCGGAACAACGATGCAAGAAGCTGATGGGAGTTGTCCAATCTGTAGAAGGAAAA 1276
|||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct 1386 ATGAATGCGGAACAACGATGCAAGAAGCTGATGGGAGTTGTCCAATATGTCGAAGGAAAA 1445
Query 1277 TGAAGAAAGTGAAGCGAATCTTTACAGTG 1305
||||||||||||||||||||| |||||||
Sbjct 1446 TGAAGAAAGTGAAGCGAATCTATACAGTG 1474
> AT2G38195.1 | Symbols: | RING/U-box superfamily protein | chr2:16003615-16006654
FORWARD LENGTH=1712
Length=1712
Score = 959 bits (519), Expect = 0.0
Identities = 681/757 (90%), Gaps = 19/757 (3%)
Strand=Plus/Plus
Query 1734 AGGTTCTGCAGCTCGGCTTGTGATGTCTGAAGGAATGCCAGGCATGTTTCGGTCGACGTC 1793
||||||||||| |||||||||||| |||||||||||||| | | | ||||| ||||
Sbjct 572 AGGTTCTGCAGTTCGGCTTGTGATCACTGAAGGAATGCCATTCTTCTATCGGT---CGTC 628
Query 1794 GCTGGAGGATCTTGCATTTTGTGACAGAGCTTGGTCATGGAATCTAATTCAGGGGAGTGG 1853
|||| ||||| |||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct 629 GCTGAAGGATATTGCATTTCGTGACACCGCTTGGTCATGGAATCTAATTCAGGGGAGTGG 688
Query 1854 TATGATTGAATTGGAGATAAGTAAGTCTACAGGTTATTATCTTACTGTGGCTAACTCGAA 1913
||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||| |||
Sbjct 689 TATGATTCAATTGGATATAAGTAAGTCTAAAGGTTATTATCTTACTGTGGCTAACTTGAA 748
Query 1914 GAGGAAGGACGTAGAGGTGGAACTGGATTTTGATGTGAGAGCT-GTCTTATATGATACTA 1972
|||||||||||||||||||||||||||| ||||||||| || | ||||| ||||||||||
Sbjct 749 GAGGAAGGACGTAGAGGTGGAACTGGATATTGATGTGA-AGGTTGTCTTGTATGATACTA 807
Query 1973 ATCAATCATCCTACAACTGTACCTTCAGCAATGGCGAGTGCGCATTCAAAACCAATGAAA 2032
| |||||||||||||| ||| |||||||||||||||||||| ||||||||| |||||||
Sbjct 808 AACAATCATCCTACAATTGTTCCTTCAGCAATGGCGAGTGCTCATTCAAAATGAATGAAA 867
Query 2033 TGTCCCCTGTTGAAAATTATGCTGTCGTAACTTCACCAGCACTGGGTCAGGGAGTATCTA 2092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 868 GGTCCCCTGTTGAAAATTATGCTGTCGTAACTTCACCAGCACTGGGTCAGGGAGTATCCA 927
Query 2093 TCGAGGATGAATGGTATATCGAGTTGTCATATCAACCTAGATGGATTGCATATATAAGCT 2152
|||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct 928 TCGATGATGAATGGTATATCGAGTTGTCATATCAACCTAGATTGATTGCATATGGAAGCT 987
Query 2153 TCACAGGTATTTTG-TTTAGCTTCATGCTGGTAGCTATACATTTCTGCAACAAGTTACAG 2211
|||||||| | ||| ||| ||||||||||||||||||||| ||||||||||||||| ||
Sbjct 988 TCACAGGTGTGTTGCTTTC-CTTCATGCTGGTAGCTATACACTTCTGCAACAAGTTAAAG 1046
Query 2212 TGCAGTGGTGGAGAGGGACTTCTAACCGAAAATGATTCAGCGAGAACACATCTACTTGCA 2271
|| |||||||||||||| || || ||||| ||||||||| ||||||| ||||||||||
Sbjct 1047 TGTTGTGGTGGAGAGGGATTTTTATCCGAAGATGATTCAGTGAGAACATGTCTACTTGCA 1106
Query 2272 GACAAAGATGATGATGATTCGT-GTAATGATGGCGAAGCAAGTAACAGAAGTAGATATGT 2330
||||||| ||| |||||| || ||||||||| |||||||||||||| || || | |
Sbjct 1107 GACAAAGGTGACAATGATT-GTTGTAATGATGTCGAAGCAAGTAACA-AA--AG-TCT-- 1159
Query 2331 CTGTGCCATTTGTTTTGATGCTCCAAGAGATTGTT-TTATCTTCCCGTGTGGCCATTGCG 2389
||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||
Sbjct 1160 CTGTGCCATTTGTTTTGATGCTCCAAGAGATTGTTGTT-TCCTCCCGTGTGGCCATTGCG 1218
Query 2390 TCTCCTGTTATCAGTGCGGAACAAAGATAAAAAGAGCCAAGGGGAGGTGTCCAATATGTC 2449
|||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1219 TCTCCTGTTACCAATGCGGAACAAAGATAAAAAGAACCAAGGGGAGGTGTCCAATATGTC 1278
Query 2450 GAAAGAAAATGATGC-TAGTGAAGCAAATCTATACAG 2485
|||||||||| |||| | ||||||| |||||||||||
Sbjct 1279 GAAAGAAAATAATGCAT-GTGAAGCGAATCTATACAG 1314
Score = 333 bits (180), Expect = 5e-90
Identities = 301/358 (84%), Gaps = 14/358 (4%)
Strand=Plus/Plus
Query 1380 CCACCACCT-CACTCCGAAGAAGATT-TCGATGACATCATCGATTGTGGCGAAACTTCGT 1437
||||||||| | || ||| ||||||| | ||||| ||| || ||| || |||| |||| |
Sbjct 162 CCACCACCTCCCCT-CGATGAAGATTGT-GATGATATCTTCAATTCTGACGAATCTTCAT 219
Query 1438 GGGGGCTGTTTAGCGTGTCTTGCTTTATTGGCGTTATGGGTTTATGGTTCATTGGTTGCG 1497
|||||||||| ||| |||| ||||| | | ||||||| || |||||| | |||||
Sbjct 220 GGGGGCTGTTGAGCTTGTCCTGCTTCGGTATCATTATGGGATTGTGGTTC--T--TTGCG 275
Query 1498 TCGGTTTTTCTGATGTTCGGTTTTTACGGTGA-TGCAAA-AGTCTGGCTTGGACCTCACT 1555
||||||| |||||| || ||| |||||||| | || ||| ||||||||||||||| |||
Sbjct 276 TCGGTTTGTCTGATTTTTGGTGTTTACGGT-AGTG-AAACTGTCTGGCTTGGACCTAACT 333
Query 1556 CGT-CAGTTCTTGTTGAACCAAGTTCCATTTTTGTCAAAAGCATTAAGGTGAAGGAGCTT 1614
||| || |||||||| ||||||||||||| ||||||||||||||||| | |||||||||
Sbjct 334 CGTCCA-TTCTTGTTAAACCAAGTTCCATCTTTGTCAAAAGCATTAATGCAAAGGAGCTT 392
Query 1615 GACTTTACAAAGCCTGGTCTTCAACTTTATGGATTCGATGATGAATCTACTCCTAGTACT 1674
|| ||| |||||||||| ||||| || ||||||||| ||| | |||||||||||||| |
Sbjct 393 GATTTTTCAAAGCCTGGACTTCAGCTATATGGATTCAATGGTCAATCTACTCCTAGTGGT 452
Query 1675 TATATTGTGAACTGGACTGAATCTCGAGTGTTATCTGTCTCACAGAATTCTTACAAGG 1732
||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 453 TATTTTGTAAACTGGACTGAATCTCGAGTGTTATCTGTCTCACAGAATTCTTACAAGG 510
Score = 174 bits (94), Expect = 3e-42
Identities = 163/194 (84%), Gaps = 14/194 (7%)
Strand=Plus/Plus
Query 1114 AATGATGGT-GAAGCAAGTAACCGAAGTAGACGTCTCTGTGCCATTTGTTTTGATGCTCC 1172
|||||| || ||||||||||| | || | | ||||||||||||||||||||||||||||
Sbjct 1131 AATGAT-GTCGAAGCAAGTAA-C-AA--A-A-GTCTCTGTGCCATTTGTTTTGATGCTCC 1183
Query 1173 AAGAGATTGCTT-TTTCCTCCCATGTGGCCATAGCGTCTCCTGTTATGAATGCGGAACAA 1231
||||||||| || ||||||||| ||||||||| ||||||||||||| ||||||||||||
Sbjct 1184 AAGAGATTG-TTGTTTCCTCCCGTGTGGCCATTGCGTCTCCTGTTACCAATGCGGAACAA 1242
Query 1232 CGATGCAA-GAAGCTGATGGGAGTTGTCCAATCTGTAGAAGGAAAATGAA-GAAAGTGAA 1289
||| || ||| | | ||||| |||||||| ||| ||| |||||| || | | |||||
Sbjct 1243 AGATAAAAAGAACCA-AGGGGAGGTGTCCAATATGTCGAAAGAAAAT-AATGCATGTGAA 1300
Query 1290 GCGAATCTTTACAG 1303
|||||||| |||||
Sbjct 1301 GCGAATCTATACAG 1314
> AT2G38220.1 | Symbols: | RING/U-box superfamily protein | chr2:16007891-16010932
FORWARD LENGTH=1728
Length=1728
Score = 909 bits (492), Expect = 0.0
Identities = 652/727 (90%), Gaps = 19/727 (3%)
Strand=Plus/Plus
Query 1764 AGGAATGCCAGGCATGTTTCGGTCGACGTCGCTGGAGGATCTTGCATTTTGTGACAGAGC 1823
|||||||||| | | | ||||| |||||||| ||||| |||||||| |||||| ||
Sbjct 617 AGGAATGCCATTCTTCTATCGGT---CGTCGCTGAAGGATATTGCATTTCGTGACACCGC 673
Query 1824 TTGGTCATGGAATCTAATTCAGGGGAGTGGTATGATTGAATTGGAGATAAGTAAGTCTAC 1883
||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct 674 TTGGTCATGGAATCTAATTCAGGGGAGTGGTATGATTCAATTGGATATAAGTAAGTCTAA 733
Query 1884 AGGTTATTATCTTACTGTGGCTAACTCGAAGAGGAAGGACGTAGAGGTGGAACTGGATTT 1943
|||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |
Sbjct 734 AGGTTATTATCTTACTGTGGCTAACTTGAAGAGGAAGGACATAGAGGTGGAACTGGATAT 793
Query 1944 TGATGTGAGAG-CTGTCTTATATGATACTAATCAATCATCCTACAACTGTACCTTCAGCA 2002
|||||||| || ||||||| ||||||||||| ||| |||||||||| ||| |||||||||
Sbjct 794 TGATGTGA-AGGCTGTCTTGTATGATACTAAACAAACATCCTACAATTGTTCCTTCAGCA 852
Query 2003 ATGGCGAGTGCGCATTCAAAACCAATGAAATGTCCCCTGTTGAAAATTATGCTGTCGTAA 2062
||||||||||| ||||||||| ||||||| || ||||||||||||||||||||||||||
Sbjct 853 ATGGCGAGTGCTCATTCAAAATGAATGAAAGGTACCCTGTTGAAAATTATGCTGTCGTAA 912
Query 2063 CTTCACCAGCACTGGGTCAGGGAGTATCTATCGAGGATGAATGGTATATCGAGTTGTCAT 2122
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct 913 CTTCACCAGCACTGGGTCAGGGAGTATCCATCGATGATGAATGGTATATCGAGTTGTCAT 972
Query 2123 ATCAACCTAGATGGATTGCATATATAAGCTTCACAGGTATTTTG-TTTAGCTTCATGCTG 2181
|||||||||||| |||||||||| ||||||||||||| | ||| ||| ||||||||||
Sbjct 973 ATCAACCTAGATTGATTGCATATGGAAGCTTCACAGGTGTGTTGCTTTC-CTTCATGCTG 1031
Query 2182 GTAGCTATACATTTCTGCAACAAGTTACAGTGCAGTGGTGGAGAGGGACTTCTAACCGAA 2241
||||||||||| ||||||||||||||| ||||| |||||||||||||| || || ||| |
Sbjct 1032 GTAGCTATACACTTCTGCAACAAGTTAAAGTGCTGTGGTGGAGAGGGATTTTTATCCGGA 1091
Query 2242 AATGATTCAGCGAGAACACATCTACTTGCAGACAAAGATGATGATGATTCGT-GTAATGA 2300
||||||||| ||||||| ||||||||||||||||| ||| |||||| || |||||||
Sbjct 1092 GATGATTCAGTGAGAACATGTCTACTTGCAGACAAAGGTGACAATGATT-GTTGTAATGA 1150
Query 2301 TGGCGAAGCAAGTAACAGAAGTAGATATGTCTGTGCCATTTGTTTTGATGCTCCAAGAGA 2360
|| |||||||||||||| || || | | ||||||||||||||||||||||||||||||
Sbjct 1151 TGTCGAAGCAAGTAACA-AA--AG-TCT--CTGTGCCATTTGTTTTGATGCTCCAAGAGA 1204
Query 2361 TTGTT-TTATCTTCCCGTGTGGCCATTGCGTCTCCTGTTATCAGTGCGGAACAAAGATAA 2419
||||| || || |||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct 1205 TTGTTGTT-TCCTCCCGTGTGGCCATTGCGTCTCCTGTTACCAATGCGGAACAAAGATAA 1263
Query 2420 AAAGAGCCAAGGGGAGGTGTCCAATATGTCGAAAGAAAATGATGC-TAGTGAAGCAAATC 2478
||||| ||||||||||||||||||||||||||||||||||||| | | ||||||| ||||
Sbjct 1264 AAAGAACCAAGGGGAGGTGTCCAATATGTCGAAAGAAAATGATACAT-GTGAAGCGAATC 1322
Query 2479 TATACAG 2485
|||||||
Sbjct 1323 TATACAG 1329
Score = 466 bits (252), Expect = 5e-130
Identities = 409/483 (85%), Gaps = 18/483 (4%)
Strand=Plus/Plus
Query 570 TGCATATCGTTACAAAGTTTGGTCATGGAATCTAATTGAGGGGAGTGGTATGATTGAATT 629
||||| |||| ||| | ||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 656 TGCATTTCGTGACACCGCTTGGTCATGGAATCTAATTCAGGGGAGTGGTATGATTCAATT 715
Query 630 GGAGATAAGAAAGTCTTCAA-GTTATTATCTTGCTGTAGCTAACTTGAAGACGAAAGACG 688
||| ||||| ||||| | || ||||||||||| |||| ||||||||||||| ||| |||
Sbjct 716 GGATATAAGTAAGTC-TAAAGGTTATTATCTTACTGTGGCTAACTTGAAGAGGAAGGACA 774
Query 689 TAGAGGTGGAACTGAATATTGATGTGAAGGCTGTCTTGTATGATACTAAACAATCATTCT 748
|||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct 775 TAGAGGTGGAACTGGATATTGATGTGAAGGCTGTCTTGTATGATACTAAACAAACATCCT 834
Query 749 ATAACTGTAACTTCAGCAATGGCGAGTGCACATTCAA--TGT-T-AT-GC--CCCTTGTT 801
| || ||| ||||||||||||||||||| ||||||| || | | | |||| |||
Sbjct 835 ACAATTGTTCCTTCAGCAATGGCGAGTGCTCATTCAAAATGAATGAAAGGTACCCT-GTT 893
Query 802 GGAAATTCTGTTGTCGTAACTTCACCAGCAGTGAGTCAGGGAGTATCCATTGAAGATGAA 861
| ||||| || ||||||||||||||||||| || |||||||||||||||| || ||||||
Sbjct 894 GAAAATTATGCTGTCGTAACTTCACCAGCACTGGGTCAGGGAGTATCCATCGATGATGAA 953
Query 862 TGGTATATC-AGGTTCTCATATCAACCTAGAGAAATTGCATATGTAATCGGCACAGGTGT 920
||||||||| || || ||||||||||||||| |||||||||| || | |||||||||
Sbjct 954 TGGTATATCGAG-TTGTCATATCAACCTAGATTGATTGCATATGGAAGCTTCACAGGTGT 1012
Query 921 GGTGATTTGCTTCATGTTGGTAGCTATACAATTCTGCAACA-GATTACAA-TGCTATGGT 978
| || ||| ||||||| ||||||||||||| |||||||||| | ||| || |||| ||||
Sbjct 1013 GTTGCTTTCCTTCATGCTGGTAGCTATACACTTCTGCAACAAG-TTA-AAGTGCTGTGGT 1070
Query 979 GGAGAGGGACATCTAACCG-AGAATGATTCAGGGAGAACACGTCTACTTGAAAACAAAGA 1037
||||||||| | || ||| ||| |||||||| ||||||| ||||||||| | ||||||
Sbjct 1071 GGAGAGGGATTTTTATCCGGAGA-TGATTCAGTGAGAACATGTCTACTTGCAGACAAAGG 1129
Query 1038 TGA 1040
|||
Sbjct 1130 TGA 1132
Score = 344 bits (186), Expect = 2e-93
Identities = 303/358 (85%), Gaps = 14/358 (4%)
Strand=Plus/Plus
Query 1380 CCACCACCT-CACTCCGAAGAAGATT-TCGATGACATCATCGATTGTGGCGAAACTTCGT 1437
||||||||| | || ||| ||||||| | ||||| ||| || ||| || |||| |||| |
Sbjct 162 CCACCACCTCCCCT-CGATGAAGATTGT-GATGATATCTTCAATTCTGACGAATCTTCAT 219
Query 1438 GGGGGCTGTTTAGCGTGTCTTGCTTTATTGGCGTTATGGGTTTATGGTTCATTGGTTGCG 1497
||||| |||| ||| |||| ||||| | | ||||||| || |||||| | |||||
Sbjct 220 GGGGGTTGTTGAGCTTGTCCTGCTTCGGTATCATTATGGGATTGTGGTTC--T--TTGCG 275
Query 1498 TCGGTTTTTCTGATGTTCGGTTTTTACGGTGA-TGCAAA-AGTCTGGCTTGGACCTCACT 1555
||||||| |||||| || ||| |||||||| | || ||| ||||||||||||||| |||
Sbjct 276 TCGGTTTGTCTGATTTTTGGTGTTTACGGT-AGTG-AAACTGTCTGGCTTGGACCTAACT 333
Query 1556 CGT-CAGTTCTTGTTGAACCAAGTTCCATTTTTGTCAAAAGCATTAAGGTGAAGGAGCTT 1614
||| || |||||||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 334 CGTCCA-TTCTTGTTAAACCAAGTTCCATCTTTGTCAAAAGCATTAAGGTGAAGGAGCTT 392
Query 1615 GACTTTACAAAGCCTGGTCTTCAACTTTATGGATTCGATGATGAATCTACTCCTAGTACT 1674
|| ||| |||||||||| ||||| || ||||||||| ||| | |||||||||||||| |
Sbjct 393 GATTTTTCAAAGCCTGGACTTCAGCTATATGGATTCAATGGTCAATCTACTCCTAGTGGT 452
Query 1675 TATATTGTGAACTGGACTGAATCTCGAGTGTTATCTGTCTCACAGAATTCTTACAAGG 1732
||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 453 TATTTTGTAAACTGGACTGAATCTCGAGTGTTATCTGTCTCACAGAATTCTTACAAGG 510
Score = 174 bits (94), Expect = 3e-42
Identities = 163/194 (84%), Gaps = 14/194 (7%)
Strand=Plus/Plus
Query 1114 AATGATGGT-GAAGCAAGTAACCGAAGTAGACGTCTCTGTGCCATTTGTTTTGATGCTCC 1172
|||||| || ||||||||||| | || | | ||||||||||||||||||||||||||||
Sbjct 1146 AATGAT-GTCGAAGCAAGTAA-C-AA--A-A-GTCTCTGTGCCATTTGTTTTGATGCTCC 1198
Query 1173 AAGAGATTGCTT-TTTCCTCCCATGTGGCCATAGCGTCTCCTGTTATGAATGCGGAACAA 1231
||||||||| || ||||||||| ||||||||| ||||||||||||| ||||||||||||
Sbjct 1199 AAGAGATTG-TTGTTTCCTCCCGTGTGGCCATTGCGTCTCCTGTTACCAATGCGGAACAA 1257
Query 1232 CGATGCAA-GAAGCTGATGGGAGTTGTCCAATCTGTAGAAGGAAAATGA-AGAAAGTGAA 1289
||| || ||| | | ||||| |||||||| ||| ||| |||||||| | | |||||
Sbjct 1258 AGATAAAAAGAACCA-AGGGGAGGTGTCCAATATGTCGAAAGAAAATGATACAT-GTGAA 1315
Query 1290 GCGAATCTTTACAG 1303
|||||||| |||||
Sbjct 1316 GCGAATCTATACAG 1329
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 123561180609
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5