BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg321537
Length=1050
Score E
Sequences producing significant alignments: (Bits) Value
AT2G38390.1 | Symbols: | Peroxidase superfamily protein | chr2... 1513 0.0
AT2G38380.1 | Symbols: | Peroxidase superfamily protein | chr2... 1424 0.0
AT3G49110.1 | Symbols: PRX33, PRXCA, ATPRX33, ATPCA | peroxidas... 231 8e-60
> AT2G38390.1 | Symbols: | Peroxidase superfamily protein | chr2:16079681-16081509
FORWARD LENGTH=1223
Length=1223
Score = 1513 bits (819), Expect = 0.0
Identities = 975/1052 (93%), Gaps = 4/1052 (0%)
Strand=Plus/Plus
Query 1 ATGGGTTTTTCGCCTTTATTTTCTTGCAGTGCAATGGGAGCCCTAATTTTGGGTTGCCTT 60
||||| |||||| ||| ||| ||||||||||| |||||||||||||| |||||||||||
Sbjct 46 ATGGGGTTTTCGTCTTCATTATCTTGCAGTGCTATGGGAGCCCTAATAGTGGGTTGCCTT 105
Query 61 CTGCTTCAAGCATCAAACTCTAATGCTCAGTTGAGGCCTGATTTCTACTTCAGGACTTGC 120
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct 106 CTGCTTCAAGCATCAAACTCTAATGCTCAGTTGAGACCTGACTTCTACTTCAGGACTTGC 165
Query 121 CCATCTGTTTTCAGA-ATCATTGGGGATACCATCGTCGATGAACTGCGGACTGATCCTCG 179
||| || |||||| | ||||||||||||||||||||| |||| |||||||||||||||||
Sbjct 166 CCACCTATTTTCA-ACATCATTGGGGATACCATCGTCAATGAGCTGCGGACTGATCCTCG 224
Query 180 TATTGCCGCGAGCATCCTTCGTCTTCACTTCCATGACTGCTTTGTTCGTGGTTGTGATGC 239
||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 225 TATTGCCGCGAGCCTCCTTCGGCTTCACTTCCATGACTGCTTTGTTCGTGGTTGTGATGC 284
Query 240 ATCGATCTTGCTTGACAATTCCACATCATTCCGGACCGAGAAAGATGCTGCTCCAAACAA 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 285 ATCGATCTTGCTTGACAATTCCACATCATTCCGGACCGAGAAAGATGCTGCTCCAAACAA 344
Query 300 AAATTCGGTTAGAGGGTTCAATGTCATAGATAGAATGAAATCAGCCCTTGAGAGAGCTTG 359
|||||||||| |||||||| |||||||||||||||||||| ||||| |||||||||||||
Sbjct 345 AAATTCGGTTCGAGGGTTCGATGTCATAGATAGAATGAAAGCAGCCATTGAGAGAGCTTG 404
Query 360 CCCAAGAACAGTATCTTGTGCAGATATCCTCACCATCGCCTCTCAAATATCAGTGCTTTT 419
|||||||||||| ||||| |||||||| |||||||||||||||| |||||||| |||||
Sbjct 405 CCCAAGAACAGTTTCTTGCGCAGATATTATCACCATCGCCTCTCAGATATCAGTTCTTTT 464
Query 420 GTCTGGGGGTCCATGGTGGCCGGTTCCCTTGGGGAGAAGAGACAGCATAGAAGCTTTCTT 479
|||||| |||||||||||||| ||||| |||||||||||||||||| |||||||||||||
Sbjct 465 GTCTGGCGGTCCATGGTGGCCAGTTCCGTTGGGGAGAAGAGACAGCGTAGAAGCTTTCTT 524
Query 480 CAAC-CTGGCTAATACAGCTCTTCCCTCTCCATTTTTCACTCTTACTCAACTTAAAGCAG 538
| | ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct 525 CG-CTCTGGCTAATACAGCTCTTCCCTCTCCATTTTCCACTCTTACTCAACTTAAAACAG 583
Query 539 CTTTTGCTGACGTTGGCCTAAACCGGGCTTCGGATCTAGTCGCTCTTTCCGGTGGTCACA 598
||||||||||||||||||||||||| |||||||| ||||||| || |||||||||||||
Sbjct 584 CTTTTGCTGACGTTGGCCTAAACCGCCCTTCGGATTTAGTCGCCCTCTCCGGTGGTCACA 643
Query 599 CATTTGGAAGAGCACAATGCCAATTCGTGACGCCTCGTCTTTACAACTTCAACGGAACCA 658
||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct 644 CATTTGGAAAAGCACAATGCCAATTCGTGACACCTCGTCTTTACAACTTCAACGGTACCA 703
Query 659 ACAGTCCAGACCCAAGTCTGAACCCAACTTACCTCGTCGAACTTCGTCAATTGTGTCCTC 718
|||| |||||||||||| ||||||||||||||||||| ||||| |||| |||||||||||
Sbjct 704 ACAGACCAGACCCAAGTTTGAACCCAACTTACCTCGTTGAACTCCGTCGATTGTGTCCTC 763
Query 719 AAAACGGAAACGGTACCGTTCTTGTCAACTTTGATCCCGTGACTCCAAATGCTTTCGATC 778
||||||||||||| |||||||| || ||||| ||| |||||||||||| | ||||||||
Sbjct 764 AAAACGGAAACGGCACCGTTCTGGTTAACTTCGATTCCGTGACTCCAACTACTTTCGATA 823
Query 779 GCCAATATTACACCAATCTTCGTAATGGGAAAGGTCTGATTCAGACTGACCAAGTGCTCT 838
| ||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||| |
Sbjct 824 GACAATATTACACCAATCTTCTTAATGGGAAAGGTTTGATTCAGAGTGACCAAGTGCTTT 883
Query 839 TCTCGACTCCAGGAGCCGACACGACTACACTAGTAAACCAATACAGCAGCAACACGTTCG 898
|||| ||||||||||| || |||| | |||||||||||||||||||||||||||||||||
Sbjct 884 TCTCAACTCCAGGAGCTGATACGATTCCACTAGTAAACCAATACAGCAGCAACACGTTCG 943
Query 899 CGTTCTTTGGAGCATTCGTCGACGCAATGATCAGGATGGGAAATCTTAGACCCTTGACTG 958
|||||||||||||||||| || |||||||| |||||||||||||||| ||| |||||||
Sbjct 944 TGTTCTTTGGAGCATTCGTTGATGCAATGATTAGGATGGGAAATCTTAAACCTTTGACTG 1003
Query 959 GAACTCAAGGAGAGATAAGACAGAATTGTAGGGTTGTGAACCCACGAATTAGTGTTGTGG 1018
|||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||
Sbjct 1004 GAACTCAAGGAGAGATAAGACAGAATTGTAGGGTTGTGAATCCAAGAATTAGGGTTGTGG 1063
Query 1019 AGAACGACGATGGTGTTGTGAGTTCTATTTGA 1050
|||||||||||||||||||||||||||| |||
Sbjct 1064 AGAACGACGATGGTGTTGTGAGTTCTATCTGA 1095
> AT2G38380.1 | Symbols: | Peroxidase superfamily protein | chr2:16076384-16078583
FORWARD LENGTH=1378
Length=1378
Score = 1424 bits (771), Expect = 0.0
Identities = 963/1056 (91%), Gaps = 12/1056 (1%)
Strand=Plus/Plus
Query 1 ATGGGTTTTTCGCCTTTATTTTCTTGCAGTGCAATGGGAGCCCTAATTTTGGGTTGCCTT 60
||||| ||||| |||| ||||||||||||||| || ||||||||||||||||||||||||
Sbjct 60 ATGGGGTTTTCTCCTTCATTTTCTTGCAGTGCTATTGGAGCCCTAATTTTGGGTTGCCTT 119
Query 61 CTGCTTCAAGCATCAAACTCTAATGCTCAGTTGAGGCCTGATTTCTACTTCAGGACTTGC 120
||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct 120 CTGCTTCAAGCATCAAACTCTAATGCTCAGTTGAGGCCTGATTTCTACTTCGGGACGTGC 179
Query 121 CCATCTGTTTTCAGA-ATCATTGGGGATACCATCGTCGATGAACTGCGGACTGATCCTCG 179
|||| |||||| || |||||||| ||| ||||||||||||||||| ||||||||||||
Sbjct 180 CCATTTGTTTTT-GATATCATTGGAAATATCATCGTCGATGAACTGCAGACTGATCCTCG 238
Query 180 TATTGCCGCGAGCATCCTTCGTCTTCACTTCCATGACTGCTTTGTTCGTGGTTGTGATGC 239
||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 239 TATTGCCGCGAGCCTCCTTCGTCTTCACTTTCACGACTGCTTTGTTCGTGGTTGTGATGC 298
Query 240 ATCGATCTTGCTTGACAATTCCACATCATTCCGGACCGAGAAAGATGCTGCTCCAAACAA 299
|||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct 299 ATCGATCTTGCTTGACAATTCCACATCATTCCGGACTGAGAAAGATGCTGCTCCGAACGC 358
Query 300 AAATTCGGTTAGAGGGTTCAATGTCATAGATAGAATGAAA-TCAGCCCTTGAGAGAGCTT 358
|||||||| | ||||||| ||||||||||||||||||||| | |||||||||||||||||
Sbjct 359 AAATTCGGCTCGAGGGTTTAATGTCATAGATAGAATGAAAGT-AGCCCTTGAGAGAGCTT 417
Query 359 GCCCAAGAACAGTATCTTGTGCAGATATCCTCACCATCGCCTCTCAAATATCAGTGCTTT 418
||||| ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 418 GCCCAGGAAGAGTCTCTTGTGCAGATATTCTCACCATCGCCTCTCAAATATCAGTGCTTT 477
Query 419 TGTCTGGG-GGTCCATGGTGGCCGGTTCCCTTGGGGAGAAGAGACAGCATAGAAGCTTTC 477
|||| ||| |||||||||||||||||||| |||||||| |||||||| |||||||||||
Sbjct 478 TGTC-GGGAGGTCCATGGTGGCCGGTTCCGTTGGGGAGGAGAGACAGTGTAGAAGCTTTC 536
Query 478 TTCAAC-CTGGCTAATACAGCTCTTCCCTCTCCATTTTTCACTCTTACTCAACTTAAAGC 536
||| | ||||||||||||||||| |||||||| ||||||| |||||||||||||||| |
Sbjct 537 TTCG-CTCTGGCTAATACAGCTCTGCCCTCTCCGTTTTTCAATCTTACTCAACTTAAAAC 595
Query 537 AGCTTTTGCTGACGTTGGCCTAAACCGGGCTTCGGATCTAGTCGCTCTTTCCGGTGGTCA 596
||| ||||||||||||||||||||||| |||| |||||||| |||||||||||||||||
Sbjct 596 AGCCTTTGCTGACGTTGGCCTAAACCGCACTTCCGATCTAGTTGCTCTTTCCGGTGGTCA 655
Query 597 CACATTTGGAAGAGCACAATGCCAATTCGTGACGCCTCGTCTTTACAACTTCAACGGAAC 656
|||||||||||||||||||||||| ||||||||||||||||| ||||||||||| || ||
Sbjct 656 CACATTTGGAAGAGCACAATGCCAGTTCGTGACGCCTCGTCTCTACAACTTCAATGGTAC 715
Query 657 CAACAGTCCAGACCCAAGTCTGAACCCAACTTACCTCGTCGAACTTCGTCAATTGTGTCC 716
||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||
Sbjct 716 AAACAGTCCAGACCCAAGTCTGAACCCAACTTACCTTGTCGAACTCCGTCGATTGTGTCC 775
Query 717 TCAAAACGGAAACGGTACCGTTCTTGTCAACTTTGATCCCGTGACTCCAAATGCTTTCGA 776
||||||||||||||| |||||||| |||||||| ||| |||||||||| ||||||||||
Sbjct 776 TCAAAACGGAAACGGCACCGTTCTGGTCAACTTCGATGTCGTGACTCCAGATGCTTTCGA 835
Query 777 TCGCCAATATTACACCAATCTTCGTAATGGGAAAGGTCTGATTCAGACTGACCAAGTGCT 836
| | ||||| |||||||| |||||||||||||||||||| ||||||| |||||| | ||
Sbjct 836 TAGTCAATACTACACCAACCTTCGTAATGGGAAAGGTCTTATTCAGAGTGACCAGGAACT 895
Query 837 CTTCTCGACTCCAGGAGCCGACACGACTACACT--AGTAAACCAATACAGCAGCAACACG 894
||| ||||||||||||||||| |||| | | || ||||||||||||||||||| ||| |
Sbjct 896 CTTTTCGACTCCAGGAGCCGATACGA-TCC-CTTTAGTAAACCAATACAGCAGCGACATG 953
Query 895 TTCGCGTTCTTTGGAGCATTCGTCGACGCAATGATCAGGATGGGAAATCTTAGACCCTTG 954
| || ||||||| |||||||| | ||||||||||| |||||||||||||||||||| |||
Sbjct 954 TCCGTGTTCTTTCGAGCATTCATTGACGCAATGATTAGGATGGGAAATCTTAGACCTTTG 1013
Query 955 ACTGGAACTCAAGGAGAGATAAGACAGAATTGTAGGGTTGTGAACCCACGAATTAGTGTT 1014
|||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||| |||
Sbjct 1014 ACTGGAACTCAAGGAGAGATTAGACAAAATTGTAGGGTTGTGAATCCACGAATTAGGGTT 1073
Query 1015 GTGGAGAACGACGATGGTGTTGTGAGTTCTATTTGA 1050
|||||||||||||||||||||||||||||||| |||
Sbjct 1074 GTGGAGAACGACGATGGTGTTGTGAGTTCTATCTGA 1109
> AT3G49110.1 | Symbols: PRX33, PRXCA, ATPRX33, ATPCA | peroxidase
CA | chr3:18200664-18203142 FORWARD LENGTH=1365
Length=1365
Score = 231 bits (125), Expect = 8e-60
Identities = 338/440 (77%), Gaps = 18/440 (4%)
Strand=Plus/Plus
Query 175 CCTCGTATTGCCGCGAGCATCCTTCGTCTTCACTTCCATGACTGCTTTGTTCGTGGTTGT 234
|||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 230 CCTCGTATCGCCGGGAGCATCCTTCGTCTTCACTTCCATGACTGCTTTGTTAATGGTTGT 289
Query 235 GATGCATCGATCTTGCTT-GACAATTCCACATCATTCCGGACCGAGAAAGATGCTGCTCC 293
||||| ||||||||| || ||||| | |||||||| || || ||||||||||| ||
Sbjct 290 GATGCTTCGATCTTG-TTAGACAACACGACATCATTTCGAACAGAGAAAGATGCA-CTTG 347
Query 294 -AAACAAAAATTCGGTTAGAGGGTT-CAATGTCATAGATAGAATGAAATCAGCCCTTGAG 351
||| |||||| | |||| || | | || || |||||||||||| | || | |||
Sbjct 348 GAAATGCAAATTCAGCCCGAGGATTTCCA-GTGATTGATAGAATGAAAGCTGCGGTGGAG 406
Query 352 AGAGCTTGCCCAAGAACAGTATCTTGTGCAGATATCCTCACCATCGCCT-CTCAA-ATAT 409
|| || ||||||||||| || || || |||||||| |||||||| || | ||||| | ||
Sbjct 407 AGGGCATGCCCAAGAACCGTTTCATGCGCAGATATGCTCACCATTGC-TGCTCAACA-AT 464
Query 410 CAGTG-CTTTTGTCTGGGGGTCCATGGTGGCCGGTTCCCTTGGGGAGAAGAGACAGCATA 468
| || |||| | | || ||||| | ||| |||||| || ||||||||||||||| ||
Sbjct 465 CTGTCACTTTGG-CAGGAGGTCCTTCTTGGAAGGTTCCTTTAGGGAGAAGAGACAGCTTA 523
Query 469 GAAGC-TTTCTTCAACCTGGCTAATACAGCTCTTCCCTCTCCATTTTTCACTCTTACTCA 527
|||| ||||| | | || |||| || |||||| ||||||| ||||| ||| | ||
Sbjct 524 CAAGCATTTCTAGATCTTG-CTAACGCAAATCTTCCAGCTCCATTCTTCACACTTCCACA 582
Query 528 ACTTAAAGC-AGCTTTTGCTGACGTTGGCCTAAACCGGGCTTCGGATCTAGTCGCTCTTT 586
|||||||| | ||| | |||||||| | || |||| ||||| || || || |
Sbjct 583 GCTTAAAGCCAACTTCAAAA-ATGTTGGCCTCGATCGTCCTTCTGATCTTGTTGCGCTCT 641
Query 587 CCGGTGG-TCACACATTTGG 605
|||| || ||||||||||||
Sbjct 642 CCGG-GGCTCACACATTTGG 660
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 51490000675
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5