BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg321593
Length=1425
Score E
Sequences producing significant alignments: (Bits) Value
AT2G38995.1 | Symbols: | O-acyltransferase (WSD1-like) family ... 1653 0.0
> AT2G38995.1 | Symbols: | O-acyltransferase (WSD1-like) family
protein | chr2:16282120-16284868 FORWARD LENGTH=1654
Length=1654
Score = 1653 bits (895), Expect = 0.0
Identities = 1277/1456 (88%), Gaps = 47/1456 (3%)
Strand=Plus/Plus
Query 1 ATGGAGAAAGAAGACCAAGAGACATCAGCAGTGGAGCCGCTTAGCCCGATTTCACAGTTG 60
|||| |||||| || ||||| ||| | ||| | ||||| ||||||||| |||||||||||
Sbjct 47 ATGGCGAAAGAGGAGCAAGAAACAGCGGCAATAGAGCCACTTAGCCCGGTTTCACAGTTG 106
Query 61 TTCCTTTCGCCGACTCTCTATTGCGTCATTATTTTTACTTTAGGGTTTAAAACTAGATGC 120
|| ||||||||| |||||| ||| |||||||||| ||||||||||| |||||||||||
Sbjct 107 TTTGTTTCGCCGAGTCTCTACTGCTTCATTATTTTCACTTTAGGGTTCCAAACTAGATGC 166
Query 121 AACCCATCTTCCATTGTTGAAGGTATCAAGAACACATGGATCAAGTTCCCTCGCTTCTCT 180
|||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 167 AACCCATCCACCATTGTTGAAGGTGTCAAGAACACATGGATCAAGCTCCCTCGCTTCTCT 226
Query 181 TGCAAATTGGAGATGAAGAAAAATGGGAAAGCGGT-TTGGGTTCCTACTACT-TAT-GAA 237
||||| ||||||| ||||||||||| ||||| || |||||||||| || | | | | |
Sbjct 227 AGCAAAGTGGAGATAAAGAAAAATGGAAAAGC-GTCTTGGGTTCCTGTTAGTGT-TCG-A 283
Query 238 GTAGAAGATCATGTTATTGTTCCAGATATTGATTATTCCAACATTGAAAATCCTGATCAA 297
||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 284 GTAGAAGATCATGTTGTTGTTCCAGATCTTGATTATTCCAACATTGAAAATCCTGATCAA 343
Query 298 TTTATAGAAGACTATACTTCGAACATT-GCTAATACTCCAATGGACATGTCCAAACCTTT 356
||||||||||||||||||||||| ||| ||||||||||| |||||||||||| ||||||
Sbjct 344 TTTATAGAAGACTATACTTCGAA-ATTAGCTAATACTCCGATGGACATGTCCCGACCTTT 402
Query 357 ATGGGAATTTCATGTT-CTGAATATTAAGACATCAAATGCAGAATCTTT-GTGTATAGGG 414
||||||| ||||| || || ||||| ||||||||||||||||||||||| | ||||||
Sbjct 403 ATGGGAACTTCAT-TTACTTAATATAAAGACATCAAATGCAGAATCTTTAGC-TATAGGA 460
Query 415 AAACTGCATCATTCACTCGGCGATGGGATGTCACTTATGTCTCTTCTACTCGCTATTTCA 474
||| | |||||||| || |||||||||||||| ||||| ||||||||| | |||| ||||
Sbjct 461 AAATTTCATCATTCTCTTGGCGATGGGATGTCTCTTATATCTCTTCTATTAGCTAGTTCA 520
Query 475 CGAAAAACATCAGACCCCGAAGCTCTT-CCTACTACCGCGGCTACAAGAAAACATGTT-G 532
|| ||||||||||| || || ||| || ||||||||||||||||||||||| |||| |
Sbjct 521 CGGAAAACATCAGATCCTGACGCT-TTGCCTACTACCGCGGCTACAAGAAAGCATGCCAG 579
Query 533 ATTCCAATGATAAG-GATTGGTGGTTGGTTGGGAGATTTTGGTTCATGATAAGAATCATT 591
||||||| | ||| | ||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 580 -TTCCAATAAAAAGAG-TTGGTGGTTGGTTGGAAGATTTTGGTTTATGATAAGAATCATT 637
Query 592 TTCACAACTGTTATTGAATTGTTCAAGTATT-GTCTTACACTATGTTTTATGCGGGATAC 650
||||| |||||| |||||||||| ||||||| | ||||||||||||||||||||||| ||
Sbjct 638 TTCACTACTGTTGTTGAATTGTTTAAGTATTTG-CTTACACTATGTTTTATGCGGGACAC 696
Query 651 TAAAACTCCTCTCAA-GGGTAAACCGGGAGATAG-AGTTCAATCTAGAAAGGTTATCCAT 708
||||||||| || || ||||||| |||| ||| | | | | ||||||||||||||| |||
Sbjct 697 TAAAACTCCCCT-AATGGGTAAAACGGGTGAT-GCAATACGATCTAGAAAGGTTATACAT 754
Query 709 CGGATAATAAGCCTTGATGACGTCAAGTTGGTGAAGAACA-CAATGGAAATGAAAGTAAA 767
|||||| ||||| ||||||| ||||||||||||||||||| || |||| |||||||| ||
Sbjct 755 CGGATAGTAAGCTTTGATGATGTCAAGTTGGTGAAGAACAACA-TGGATATGAAAGTGAA 813
Query 768 TGATGTTCTCCTTGGAATGACACAGGCAGGTCTCTCAAGATATTTGAGCCGAAAATATG- 826
||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 814 TGATGTTCTTCTTGGAATGACACAGGCAGGTCTCTCAAGATATTTGAGCAGGAAATATGT 873
Query 827 A--TGAAGATACGGTAGCCGAGAAGaaaaaaa--T----------CCGTCTTCGCGGTAC 872
| |||||||| ||| | |||||||||||||| | ||||||||| |||||
Sbjct 874 AGATGAAGATATGGTGGTCGAGAAGAAAAAAAACTTGGAGAAAATCCGTCTTCGTGGTAC 933
Query 873 AGTAATCGTAAATTTAAGAGAA-ACTACAAAGA-TCGAGGATCTGGCGAATATGATGGCA 930
|||| ||||||||||||||| | || ||||| | |||||||| |||||||||||||||||
Sbjct 934 AGTATTCGTAAATTTAAGAGCAGAC-ACAAA-ACTCGAGGATTTGGCGAATATGATGGCA 991
Query 931 AAGGGTTCAAAAAGTAGATGGGGAAACTTCGTAGGTATTGTCATTTTTCCGTTATGGATA 990
|| |||||||| ||||||||||||||||||||||| || | || ||||| |||||| |
Sbjct 992 AAAGGTTCAAAGTGTAGATGGGGAAACTTCGTAGGTGTTATTATATTTCCTTTATGGGTG 1051
Query 991 AGATCTGAGGATGATCCGTTGGAATACGTCCAACGAGCCAAATCTACTATGGATATCAAA 1050
||||| || |||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct 1052 AGATCCGAAGATGATCCGTTGGAATACGTTCGACGAGCCAAATCTACTATGGATATCAAA 1111
Query 1051 AAACTCTCCATGGAATCACTTATTTGCTATGGAGTCATCAAATTTGCCATGAAAA-TGTT 1109
||||| ||||| ||||||||||||||||||||| |||||||| || ||| ||||| | |
Sbjct 1112 AAACTGTCCATAGAATCACTTATTTGCTATGGACTCATCAAACTTACCA-GAAAAATACT 1170
Query 1110 CGGAGAAAAGGTAGTAGAAACTCTTGTAAAGAGAATATTTGATCATACAACATTGGCATT 1169
||| | ||||||||||||||||||||| | |||| ||||||||||||| |||||| ||||
Sbjct 1171 CGGGGGAAAGGTAGTAGAAACTCTTGTTAGGAGACTATTTGATCATACGACATTGACATT 1230
Query 1170 TTCAAATGTGATGGGTCCAGACGAAGAAACAAGTTTCTTTGGTCATCCAATGTCTTACGT 1229
||| ||||||||||||||||||||||| | |||||| |||| |||||||||||||||||
Sbjct 1231 TTCTAATGTGATGGGTCCAGACGAAGATATAAGTTTTTTTGACCATCCAATGTCTTACGT 1290
Query 1230 AGCAGCAAGTGCATTGGGTGGATCACAAGCTCTTATTATCCATTTTGTGAGCTATGTAAA 1289
||||||||| ||||| |||||| ||||||||||||||||||||| || | |||||||||
Sbjct 1291 AGCAGCAAGCGCATTAGGTGGACCACAAGCTCTTATTATCCATTACGTAACCTATGTAAA 1350
Query 1290 CAAGATTGTCATCAATCTAGCAGTCGACACAACAGTGATTCCAGACCCTTATCTACTATG 1349
|||||||||||||||||||||||| |||||| ||||||||| ||||||| ||||||||||
Sbjct 1351 CAAGATTGTCATCAATCTAGCAGTAGACACATCAGTGATTCGAGACCCTCATCTACTATG 1410
Query 1350 TGATGATTTGGTAGAATCGCTCAATATCATCAAACTTGCTGCCTTGGAGAAAGGAGTTCA 1409
|||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct 1411 TGATGATTTGGTAGAATCGCTCGATATCATCAAACTTGCTGCCATGGAGAAAGGAGTTCA 1470
Query 1410 TAAAATGGAGGTTTGA 1425
||||||||||||||||
Sbjct 1471 TAAAATGGAGGTTTGA 1486
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 70230562455
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5