BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg321630 Length=2160 Score E Sequences producing significant alignments: (Bits) Value AT2G39435.1 | Symbols: | Phosphatidylinositol N-acetyglucosami... 1836 0.0 AT2G39440.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Ribonucle... 449 4e-125 AT2G39445.1 | Symbols: | Phosphatidylinositol N-acetylglucosam... 374 3e-102 AT1G61280.1 | Symbols: | Phosphatidylinositol N-acetylglucosam... 211 2e-53 > AT2G39435.1 | Symbols: | Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related | chr2:16464718-16466871 REVERSE LENGTH=1632 Length=1632 Score = 1836 bits (994), Expect = 0.0 Identities = 1344/1500 (90%), Gaps = 76/1500 (5%) Strand=Plus/Plus Query 696 ATCTTTTAG-TGATAAAGATTACTTCGTTTC----TATTCT-G--G-GT----GTCTCAA 742 ||||||| | |||||||||||||||| |||| |||||| | | || ||||||| Sbjct 86 ATCTTTT-GATGATAAAGATTACTTCATTTCTGGTTATTCTCGAAGAGTAGAGGTCTCAA 144 Query 743 AAGAAATGGAGTCTAAGGAAATTAGATCCTCCTCCGTGATTGAGAGATCGATGCGTTTTA 802 |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct 145 AAGAAATGGAGTCTAAGGAAATTAGATCCTCCTCTGTCTTTGAGAGATCGATGCGTTTTA 204 Query 803 ATGGACTATTTCAGCCTCTGCATCAAGATAAGCTGAGAGTTGTTAAGAAACAG----AAC 858 |||||| | || | |||||||||||||||||||||| |||||||| ||| Sbjct 205 ATGGAC----T----CT-T---TCAAGATAAGCTGAGAGTTGTTGAGAAACAGAATCAAC 252 Query 859 CAAC-AAA-----T--CCAAAAGGAGTCCATTTCTGGTTTCACAGTGATTCCAACGCAGG 910 || | ||| | |||||||||||| | ||||||||||||||||||||||||| || Sbjct 253 CACCAAAACGGTTTAACCAAAAGGAGTCTAATTCTGGTTTCACAGTGATTCCAACGAAGC 312 Query 911 AACTTTGTCGAGTTTATCTCCGGAAACCCAATTTGTTGGCTTCCAAGGGTATAATTGATG 970 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct 313 AACTTTGTCGAGTTTATCTCCAGAAACCGAATTTGTTGGCTTCCAAGGGTATAATTGATG 372 Query 971 CACTAGCTAAGCCTCCTCATAGGAATTATGGTAGGAG--AT-ATCATCAAAACTTGAAGT 1027 |||||||||||||||||||||||| || ||||||||| || |||| |||||||| |||| Sbjct 373 CACTAGCTAAGCCTCCTCATAGGATTTTTGGTAGGAGATATGATCAGCAAAACTTCAAGT 432 Query 1028 CAAAGTTGAGACATCATCACACAACAAGTGTTGATACTCTGAAACACAAATTCCGG-AAG 1086 ||||| ||||||||| ||||||||||||| ||||| |||||||||||||||| || ||| Sbjct 433 CAAAGCTGAGACATCTTCACACAACAAGTATTGATCCTCTGAAACACAAATT-TGGCAAG 491 Query 1087 AAAGAGAATTCTCTGAGATATTTCACTCCTCTTGGTTTCGGTAGTGGTTCTTGTTTAGGA 1146 |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct 492 GAAGAGAATTCTCTGAGATATTTCACTCCTCTTGGTTTCAGTAGTGGTTCTCGTTTAGGA 551 Query 1147 GATAGGAAGAAAGTGAAAGACCTTT-CTTT--TGAGGAGAAACCAAAGGAAATGAAGAAA 1203 ||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||| Sbjct 552 GATAGGAAGAAAGGGAAAGACCTTTCCTTTCAGGAGGAGAAACCAAAGGAAATGAAGAAA 611 Query 1204 CTTTTTGATGGTACTACATTTGGTCAGAAGAAGGATAGAGTTGTGAGAGAAGTTAAATCC 1263 | |||| | | | |||||||||||| |||||||||||||||||||||||| Sbjct 612 C--TTTG-T-G------A-----TCAGAAGAAGGAGAGAGTTGTGAGAGAAGTTAAATCC 656 Query 1264 AGTTTGATGGTTAGTACATCTAGGGACAAAGTTGCTGCAGATGTGAAGTTCAAGGATTTA 1323 |||||| |||||||||| |||||||||| |||||| |||||||||||||||| ||||||| Sbjct 657 AGTTTGGTGGTTAGTACTTCTAGGGACAGAGTTGCAGCAGATGTGAAGTTCAGGGATTTA 716 Query 1324 TCTTCTTCAGGTTTCATTAGCAAGGATAAAAATGATGAGTCATTAGATTGCTCCAATGCA 1383 |||||||| ||||||||| |||||||| ||||| ||||||| ||||||||||| ||| | Sbjct 717 TCTTCTTCTGGTTTCATTTCCAAGGATATAAATGCTGAGTCAGTAGATTGCTCCCATGGA 776 Query 1384 TCTCTGGAATGTCAGACGAACTCGGAAGAAGCTCATCAACCTAGTCCTGTTTCTGTTCTG 1443 |||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct 777 TCTCCGGAATGTCAGACGAATTCGGAAGATGCTCATCAACCTAGTCCTGTTTCTGTTCTG 836 Query 1444 GAGCCAATGTTTTACGAAGATATCTTAGACGACAGTGAAGATATCTTAGATGACAGCGAA 1503 |||||||||||||| ||||||| ||||||||| ||||||||||| ||||| ||||| ||| Sbjct 837 GAGCCAATGTTTTATGAAGATAACTTAGACGATAGTGAAGATATTTTAGACGACAGTGAA 896 Query 1504 GATCTTCCTTATCCCGATTTTCAAAGTCTAGAGAAACAGCTGGAAACCCTGAAATCTGAA 1563 ||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||| Sbjct 897 GATCTTCCTTATCCCAATTTTCTAAGTCTAGAGAATCAGCTGGAAACCCTGAAATCTGAA 956 Query 1564 TCTGAGAGTTATTCAGATGGGAGTGGGATGGAAGTATCAAGCGATGAGGAGTCCGTTCTT 1623 ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct 957 TCTGAGAGTTATTCAGATGGGAGTGGGATGGAAGTATCAAGCGATGAGGAGTCTGCACTT 1016 Query 1624 GATTCTGAAACCAAAGAAAGCAAGGACATT-ACACCAATCGGGTTCTTGGATACCCAAGA 1682 ||||||| || ||||||||||||||| | | | |||||| |||||||||||||||||||| Sbjct 1017 GATTCTGCAATCAAAGAAAGCAAGGAAAGTGA-ACCAATTGGGTTCTTGGATACCCAAGA 1075 Query 1683 AAGCAGGGATTCTTCTTACATTGATGATATATCGGCTGAAGTTGTACTTGGGGACAAGAA 1742 |||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||| Sbjct 1076 AAGCAGGGATTCTTCTTACATTGATGATATCTTGGCTGAAGTTTTACTTGGGGACAAGAA 1135 Query 1743 TTGGGTTCCTGGCAAACGTGATTCACTGGATTTAGTCATCATCCCCAAGATCTTTGAGAA 1802 ||| |||||||||||||| | | |||||||||||| |||||||||||| ||||| Sbjct 1136 TTGCGTTCCTGGCAAACG-G-------G-ATTTAGTCATCACCCCCAAGATCTTCGAGAA 1186 Query 1803 ACTGGAGAAGAAGTATTACGCAGAGACATCTTGGAAAAGATCTGAAAGAAAGATTTTGTT 1862 ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| Sbjct 1187 ACTGGAGAAGAAGTATTACACAGAGACATCTTGGAAAAGATCTGACAGAAAGATTTTGTT 1246 Query 1863 TGACAGAGTCAATTCAGGTCTTGTAGAGATTCTAGAATCCTTTTCAGCTACACCAACATG 1922 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1247 TGACAGAGTCAATTCAAGTCTTGTAGAGATTCTAGAATCCTTTTCAGCTACACCAACATG 1306 Query 1923 GAAGAAACCCGTTTCTAGAAGGCTTGGCACCACGCTAAGCACATGTGGACTGAAACAAGA 1982 |||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||| Sbjct 1307 GAAGAAACCCGTTTCTAGGAGGCTAGGCACTGCGCTAAGCACATGTGGACTGAAACAAGA 1366 Query 1983 ACTCTGGAAAGTACTTGCCAGGCAAGAGAAGCGAGCaaa-aaaaGAATCATTGGCTAAAG 2041 |||||||||||||||| | ||||||||||||||| | || |||| |||||||||| |||| Sbjct 1367 ACTCTGGAAAGTACTTTCTAGGCAAGAGAAGCGATCCAAGAAAA-AATCATTGGCCAAAG 1425 Query 2042 TGCCAGTCATAGACATTGATGAGTGGTTAGAACTCGAAGCTGATGATGAGTCAGTGGTTT 2101 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1426 TGCCAGTCATAGACATTGATGAGTGGTTAGAACTCGAAGCTGATGATGAGTCAGTGGTTT 1485 Query 2102 GTGAATTAGAAAGCT-TGATAGTAGATGAGTTGTTGGCTGAGGTTGTCAGCTTCATGTAG 2160 ||||||||||||| | ||||||| |||||||||||| ||||||||||||||||||||||| Sbjct 1486 GTGAATTAGAAAG-TATGATAGTGGATGAGTTGTTGTCTGAGGTTGTCAGCTTCATGTAG 1544 > AT2G39440.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Ribonuclease H2, subunit C (InterPro:IPR013924); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr2:16467855-16469628 REVERSE LENGTH=1020 Length=1020 Score = 449 bits (243), Expect = 4e-125 Identities = 271/285 (95%), Gaps = 0/285 (0%) Strand=Plus/Plus Query 382 GATGTTGAAATCGATGGAGTAAGAACTGAAGAAGCTCATTTCAGAGGAAGGAAGTTGCAG 441 |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct 305 GATGTTGAAATCGATGGAGTAAAAACGGAAGAAGCTCATTTCAGAGGAAGGAAGTTGCAG 364 Query 442 GGAGCAACTATCTCACTTCCTAGTGGCTATTCTGGCTTTGTGCTTGGACAAGCGAGTAAC 501 ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| Sbjct 365 GGAGCAACTATCTCACTCCCTAGTGGCTATTCTGGCTTTGTGCTTAGACAAGCGAGTAAC 424 Query 502 CTGAATGCTAATGGAAAGAGAAAAGCTTCTATGCCCGCAGAAGAGAACCAGTGTTGGGAA 561 ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct 425 TTGAATGCTAATGGAAAGAGAAAAGCTTCTATGCCCACAGAAGATAACCAGTGTTGGGAA 484 Query 562 GTGAAGGCCAAATTCGACAACCTGACTTATTGGAATCACGATAGTCTTCCTTCAAAGGAC 621 |||||||| |||||| | |||||||| || |||||||||||||||||||||||||||||| Sbjct 485 GTGAAGGCGAAATTCAATAACCTGACATACTGGAATCACGATAGTCTTCCTTCAAAGGAC 544 Query 622 GATACTTTCTTACGTTCTTTTCATTGGTTTAGCATTGCAGAAGCG 666 ||||||||||| || |||||||||||||||||||||||||||||| Sbjct 545 GATACTTTCTTTCGCTCTTTTCATTGGTTTAGCATTGCAGAAGCG 589 Score = 180 bits (97), Expect = 6e-44 Identities = 111/118 (94%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 227 TTAGAGCTGCTGCTGATGAAAACTCGATTGCGGATCTCAGGAGTCAAGTTCACCAGCTCC 286 ||||||||||||| ||||||||||| |||| ||||||||| ||||||||||||||||||| Sbjct 183 TTAGAGCTGCTGCAGATGAAAACTCCATTGTGGATCTCAGCAGTCAAGTTCACCAGCTCC 242 Query 287 CTTGCTGCATTAGATTTGATGGTCCTGCTGATGTTTCCCACTATTTCAAGCCTCAATC 344 ||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||| Sbjct 243 CTTGCTGCATTAGATTTGATGGTCCTGTTGAAGTTTCCCACTATTTCAAGCCTAAATC 300 > AT2G39445.1 | Symbols: | Phosphatidylinositol N-acetylglucosaminyltransferase, GPI19/PIG-P subunit | chr2:16470025-16471246 REVERSE LENGTH=667 Length=667 Score = 374 bits (202), Expect = 3e-102 Identities = 217/224 (97%), Gaps = 2/224 (1%) Strand=Plus/Plus Query 1 ATGCCGACGTATTTGGTGGTGACCT-TGATGTTAGCTTTGGCTTTTTACATTGGTCTCAA 59 ||||| ||||||||| |||||| || |||||||||||||||||||||||||||||||||| Sbjct 437 ATGCCAACGTATTTGATGGTGA-CTCTGATGTTAGCTTTGGCTTTTTACATTGGTCTCAA 495 Query 60 CTTCATCGCCACTCCACCCCCAACCTCTCTCAATACCTTGTTTGATGAGTACAGTAGAGA 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 496 CTTCATCGCCACTCCACCCCCAACCTCTCTCAATACCTTGTTTGATGAGTACAGTAGAGA 555 Query 120 ACCTGGGGAATTTGATGCTGGGATGGAGGAAGGTGAAGACAGGCCTATAGATCCAATCTC 179 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 556 ACCTGGTGAATTTGCTGCTGGGATGGAGGAAGGTGAAGACAGGCCTATAGATCCAATCTC 615 Query 180 TGACATTGATATTACAAGAATCAATGATCTTATGTTCAATTCAA 223 ||||||||||||||||||||| |||||||||||||||||||||| Sbjct 616 TGACATTGATATTACAAGAATAAATGATCTTATGTTCAATTCAA 659 > AT1G61280.1 | Symbols: | Phosphatidylinositol N-acetylglucosaminyltransferase, GPI19/PIG-P subunit | chr1:22603586-22604081 FORWARD LENGTH=414 Length=414 Score = 211 bits (114), Expect = 2e-53 Identities = 192/228 (84%), Gaps = 12/228 (5%) Strand=Plus/Plus Query 1 ATGCCGACGTATTTGGTGGTGACCT-TGAT-GTTAGCTTTGGCT-TTTTACATTGGTCTC 57 ||||||| ||||| | |||||| || || | | ||||||||| | ||||||||||||||| Sbjct 178 ATGCCGATGTATTCGATGGTGA-CTCTGTTAG-TAGCTTTGG-TGTTTTACATTGGTCTC 234 Query 58 AACTTCATCG-CCACTCCACCCCCAACCTCTCTCAATACCTTGTTTGATGAGTACAGTAG 116 |||||||| | | ||| || ||||||||||||||||| ||||||||||| |||||||| Sbjct 235 AACTTCAT-GTCTACTTCAAAACCAACCTCTCTCAATACTTTGTTTGATGACTACAGTAG 293 Query 117 AGAACCTGGGGAA-TTTGATGCTGGGATGGAGGAA-GGTGAAGACAGGCCTATAGATCCA 174 |||| | | ||| ||| | || ||| || ||| || ||||||||||| ||||||||| Sbjct 294 AGAAGAT-GTGAATTTTCTTCCTTTGAT-GAAGAATGGGGAAGACAGGCCAATAGATCCA 351 Query 175 ATCTCTGACATTGATATTACAAGAATCAATGATCTTATGTTCAATTCA 222 ||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct 352 ATCTCTGACATTGATATTACAAGAATCAACGATCTTATGTTCGATTCA 399 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 107127963030 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5