BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg321881
Length=3657
Score E
Sequences producing significant alignments: (Bits) Value
AT2G41960.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 5360 0.0
AT3G58050.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 1218 0.0
> AT2G41960.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT3G58050.1);
Has 11991 Blast hits to 7260 proteins in 458 species: Archae
- 17; Bacteria - 481; Metazoa - 5028; Fungi - 1325; Plants
- 615; Viruses - 38; Other Eukaryotes - 4487 (source: NCBI
BLink). | chr2:17514118-17519293 REVERSE LENGTH=4052
Length=4052
Score = 5360 bits (2902), Expect = 0.0
Identities = 3441/3691 (93%), Gaps = 77/3691 (2%)
Strand=Plus/Plus
Query 1 ATGAACAAATACAAGTGTAAAACGATGCCGGGTTTAAC-ACACATGAAT-AATGAGCATT 58
|||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||
Sbjct 279 ATGAACAAATACAAGTGTAAAACGATGCCGGGTTTAACAACACA--CATGAATGAGCATT 336
Query 59 ACTCTTCTCCTGGGTTTTGGTCTGAGGACGAAGATGGTGTTACCTACGATCAGTTGGACG 118
|||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct 337 ACTCTTCTTCTGGGTTTTGGTCTGAGGACGACGATGGACTTACCTACGATCAGTTGGACC 396
Query 119 AGTTCTGGAGTGAGCTGTCGCCTAAAGCTAGGCAGGAGCTTCTTAGGATTGACAAGCAGG 178
|||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||
Sbjct 397 AGTTCTGGAGTGAGCTGTCGTCGAAAGCTAGGCATGAGCTTCTTAGGATTGACAAGCAGA 456
Query 179 CTCTATTTGAGCAAGCTCGTAAGAACCTGTGCTGTTCCAGATGCCTTGGCCTGCTGCTTG 238
| || |||||||||||||| |||||| |||||||||||||||||||||| ||| ||||||
Sbjct 457 CACTGTTTGAGCAAGCTCGCAAGAACATGTGCTGTTCCAGATGCCTTGGACTGTTGCTTG 516
Query 239 AAGGCTTCGTGCAGATTGTTTCTACTGGGAGGGCCGCATACGATAAAAGATTTCCTTGCA 298
||||||||| |||||| ||||| ||||||||||||| ||||| |||| | | |
Sbjct 517 AAGGCTTCGCCCAGATTCTTTCTGCTGGGAGGGCCGCGTACGA-AAAA-A-------G-A 566
Query 299 ACAAATCAGGAGCCTCTAAAGATCAAATTAACGGTAAATC-AGTTGGCACTAGGAAATGT 357
| || ||| |||| |||| | |||| ||||||| | ||||||||||||||||
Sbjct 567 A-TGAT-GGGACCCTCCAAAG-----A-TAACTGTAAATCTA-ATGGCACTAGGAAATGT 617
Query 358 ACGGTTGCGTACCAGAGCCCTGCTATTCATCGATGGGGAGGTCTCACCACAACACGCGAC 417
||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |
Sbjct 618 ACGGTTGCGTACCAGAGCCCTCCTGTTCATCGATGGGGAGGTCTCACCACAACACGC-TC 676
Query 418 -GGATGTCTCACACTTCTTGACTGCTTTTTGAATGCAAAAACTTTCAAAGGGCTTCAAAC 476
|||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 677 GGGATGTATCACTCTTCTTGACTGCTTTTTGACTGCAAAAACTTTCAAAGGGCTTCAAAA 736
Query 477 TGTGTTTGAAAGTGCCCGTGCTCGAGAGAGGGAACGTGAATTGCTTTATCCTGATGCTTG 536
||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 737 TGTCTTTGAAAGTAACCGTGCTCGAGAGAGGGAACGTGAGTTGCTTTATCCTGATGCTTG 796
Query 537 TGGTGGCGGAGGTCGGGTATGGCTTAGTCAAGGGATTGCTGGTTTTGGTAAAGGTCATGG 596
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 797 TGGTGGCGGTGGTCGGGTATGGCTTAGTCAAGGGATTGCTGGTTTTGGTAAAGGTCATGG 856
Query 597 AACAAGAGAAACATGTGCTTTGCATACCACGAGGCTCTCTTGTGATACATTAGTGGATTT 656
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 857 AACAAGAGAAACATGTAATTTGCATACCACGAGGCTCTCTTGTGATACATTAGTGGATTT 916
Query 657 TTGGTCTGCACTTGAAGAGCAAAGTCGACAGTCACTTTTGAGGATGAAAGAAGAGGATTT 716
||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 917 TTGGTCTGCACTTGAAGAGCATAGTCGACAGTCACTTTTGAGAATGAAAGAAGAGGATTT 976
Query 717 TGTGGAAAGACTAACTTACAGATTCGACTGCAAGAAGTTTTGTAGAGACTGCAGAAGAAA 776
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 977 TGTGGAAAGACTAACTTACAGATTCGACTGCAAGAAGTTTTGTAGAGACTGCCGAAGAAA 1036
Query 777 TGTTATTCGGGAGTTTAAAGAACTTAAGGAACTTAAACGAATGCAGAGAGAACCAAGATG 836
||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 1037 TGTCATTCGGGAGTTTAAAGAACTTAAGGAACTTAAACGAATACAGAGAGATCCAAGATG 1096
Query 837 TACCGACTGGTTTTGTGTTGCCGATACAGCCTTTCAGTATGAGGTGGACATTGATTCCGT 896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1097 TACCGACTGGTTTTGTGTTGCCGATACAGCCTTTCAGTATGAGGTGGACATTGATTCTGT 1156
Query 897 CCGAGCAAATTGGAGTCAACATTTTACAGAGAATGCTGGATATCATCAATTCGAGTGGGC 956
||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct 1157 CCGAGCAGATTGGAGTCAATATTTTACAGAGAATGCTGGATATCATCATTTCGAGTGGGC 1216
Query 957 TATTGGAACTGGAGAAGGCGAATCTGATATCCGCGAGTTCAAATACGTAGGCAATGATCG 1016
||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct 1217 TATTGGAACAGGAGAAGGCGAATCTGATATCCTCGAGTTCAAATATGTAGGCAATGATCG 1276
Query 1017 GAGTGCCCAAGTCAATGGCCTAGACCTTCGTGGATTACACGAATGCTACATTACTCTTAG 1076
|||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1277 GAGTGCCCGAGTCAATGGCCTAGACCTTCGTGGATTACATGAATGCTACATTACTCTTAG 1336
Query 1077 GGCTTTTaaaaaaaaTGGCCGCTCCTCGGAAATATCTGTCAAAGCCCATGCATTGAGAGG 1136
||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct 1337 GGCATTTAAAAAAAATGGCCGCCCCTCAGAAATATCTGTCAAAGCCCATGCATTGAGAGG 1396
Query 1137 CCAACAGTGCGTTCACTCCAGGCTTGTGGTTGGGGATGGCTTTGTTTCAATTAAAAGAGG 1196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1397 CCAACAGTGCGTTCACTCCAGGCTTGTGGTTGGGGATGGCTTTGTTTCAATTAAAAGAGG 1456
Query 1197 GGAATGCATTCGAATGTTTTTTGAGCATGCTGAAGAGGCTGAGGAAGAAGAGGATGAAGT 1256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1457 GGAATGCATTCGAATGTTTTTTGAGCATGCTGAAGAGGCTGAGGAAGAAGAGGATGAAGT 1516
Query 1257 CATGATAGACAAAGATGGAAATGAGCTTGATGGTGAGTGCTTGCGTCCACAAAAGCATGC 1316
| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1517 CCTGATAGACAAAGATGGAAATGAACTTGATGGTGAGTGCTTGCGTCCACAAAAGCATGC 1576
Query 1317 TAAGAGTCCAGAACTTGCTCGAGAGTTTCTTCTAGATGCTGCAACGGTTATTTTCAAGGA 1376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1577 TAAGAGTCCAGAACTTGCTCGAGAGTTTCTTCTAGATGCTGCAACGGTTATTTTCAAGGA 1636
Query 1377 GCAGGTTGAAAAGGCATTTAGGGATGGTACAGCCCGTCAAAATGCACACAGTATATTTGT 1436
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1637 ACAGGTTGAAAAGGCATTTAGGGATGGTACAGCCCGTCAAAATGCACACAGTATATTTGT 1696
Query 1437 CTGCCTTTCATCGAAACTATTAGAGAAACGTGTTCATATTGCCTGCAAGGAAATTGTCAC 1496
||||||||||||| |||| |||||| |||||||||||||||||||||| |||||||| ||
Sbjct 1697 CTGCCTTTCATCGGAACTGTTAGAGCAACGTGTTCATATTGCCTGCAAAGAAATTGTTAC 1756
Query 1497 CTTGgagaagcagaacaaacttcttgaggaagaagagaaagaaaagcgtgaagaagagga 1556
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1757 CTTGGAGAAGCAGAACAAACTTCTCGAGGAAGAAGAGAAAGAAAAGCGTGAAGAAGAGGA 1816
Query 1557 gcgaaaagaaaggaaaagaaataaagaaaaggagaaaaaacttcgtagaaaggagagatt 1616
|||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 1817 GCGAAAAGAAAGGAAACGAATTAAAGAAAGGGAGAAAAAACTTCGTAGAAAGGAGAGATT 1876
Query 1617 gaaggaaaaagaacgagaaaaagagcagaagaatccaaaaTTTAGTGATAAAGCAATACT 1676
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1877 GAAGGAAAAAGAACGCGAAAAAGAGCAGAAGAATCCAAAATTTAGTGATAAAGCAATACT 1936
Query 1677 GCCAAATATGTCAAGGGAAGAAGAATGCTCTCCAAATCTTGATGAGGAAAATAACAATAC 1736
||||| ||||||||||||||||||| |||||| ||||||||||||||| | |||||||||
Sbjct 1937 GCCAATTATGTCAAGGGAAGAAGAAGGCTCTCGAAATCTTGATGAGGACACTAACAATAC 1996
Query 1737 CATAAGATGCGAGGAGTCCGGAATTGAAAATGGAAATGTAGATTTGTCTTCACCTGGTTC 1796
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1997 CATAAGATGCGAGGAGTCCGGAATTGAAAATGGAGATGTAGATTTGTCTTCACCTGGTTC 2056
Query 1797 TCCTGATGATCAAGATGAAGAGTGTTTGGATGGTTGCGCTTCTCCAAGAGCTGAAACCCA 1856
||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 2057 TCCTGATGATCAAGATGAAGAGTGTTTGGATGGTTGCATTTCTCCAAGAGTTGAAACCCA 2116
Query 1857 CTCTTGTGATAGCACTGATAGGGAGATTATAGATCATGAAGATGAAAACGGCTGCTTTAC 1916
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2117 CTCTTGTGATAGCACTGATAAGGAGATTATAGATCATGAAGATGAAAACGGCTGCTTTAC 2176
Query 1917 ACATGAAAATCCAAGACCTGCTCATCAGACAGCAAGATTATGGAAAGAGGCTCAGACTGA 1976
|| | ||||||||||||| |||| || |||||||||||||||| |||||||||
Sbjct 2177 AC--------C-AAGACCTGCTCATAAGACGGCGAGATTATGGAAAGAGGTTCAGACTGA 2227
Query 1977 TCATGCTTTGAGATGGTCAGAAAAACGCAGATTTACAGAGAATGCTTCTTCTGTCAGTAG 2036
|||| ||||||| | ||||||||||||||||||||||||||| |||||| |||||||||
Sbjct 2228 TCATTCTTTGAGGTTGTCAGAAAAACGCAGATTTACAGAGAAAACTTCTTTTGTCAGTAG 2287
Query 2037 TGCTGAGGCAGGATACTGTAATGATAGATTAGAAATGCCTTCACGACACTTCAATGGGTC 2096
| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||
Sbjct 2288 TTCTGAGGCAGGATACTGTAATGATAGATTAGAAATGTCTTCGGGACACTTCAATGGCTC 2347
Query 2097 AGATAAAAATTTGAGAGTGAAAGCTTTGAAAACTGGTGGTAGCCCAGATAGCATTAGGTC 2156
|||||||||| ||||||||||||||| |||| |||||||||||||| |||||| ||||||
Sbjct 2348 AGATAAAAATGTGAGAGTGAAAGCTTCGAAAGCTGGTGGTAGCCCAAATAGCAGTAGGTC 2407
Query 2157 TCATGAGGAGTTTCAGTGTTCAGACGACAGGACTGGGGAGAGGTATGATCACCATTCTTG 2216
|||||||||||||||||||||||| | ||||||||| |||||||||||| ||||||||||
Sbjct 2408 TCATGAGGAGTTTCAGTGTTCAGATGGCAGGACTGGTGAGAGGTATGATTACCATTCTTG 2467
Query 2217 CAGTTGCAAACCCATTAATGGTTACCGGGAAAATGTAGAGTCTAAT-CTATCTGCAACCA 2275
||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||
Sbjct 2468 CAGTTGCAAACCCATTAATGGTTACCGGGAAAAGGTAGAGTCTAATAC-ATCTGCAACCA 2526
Query 2276 GAGGCATGCGAGAACCCAAATCAG-A---------G--TCTGATCTGGATGTCTCCAAGC 2323
|||||||||||||||| ||||||| | | ||||||||||||||||||||||
Sbjct 2527 GAGGCATGCGAGAACCGAAATCAGTATTCAAATCTGACTCTGATCTGGATGTCTCCAAGC 2586
Query 2324 TTAACCGAGCCAATAGGTATAATCAATCAGGCTATAGACGAGAGATAAGAAGTAAAATGA 2383
||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct 2587 TTAACCGAGCCAATAGGTATACTCAATCAGGCTATAGACGAGAGATAAGAAGCAAAATGA 2646
Query 2384 ATAACAGTCGAAACGCTTGTAAGATGGATCCAGTAAATGCGAGAAAGGTCTTGGACTCCG 2443
|||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct 2647 ATAATAGTCGAAACGCTTGTAAGATGGATCCAGTAAATGTGAGAAAGGTCTTGGACTCTG 2706
Query 2444 TGGAGCTGAAGCATCCACGAAACAGCTCAAACTCTGACGTATCATCACTTACATGTTCAA 2503
|||||| ||||||| ||||||||||||||| ||||||||||| |||||||||| |
Sbjct 2707 TGGAGCCGAAGCATTCACGAAACAGCTCAACCTCTGACGTATTATCACTTACA-----A- 2760
Query 2504 CATACAAGGCAGAAGAGATTGAAGATGTAAGTCCCATTGTGAAGTCAGCTTGCACACTGT 2563
||||||| |||||||||||| ||||||||||||||| ||||||| ||||| |||||| ||
Sbjct 2761 CATACAAAGCAGAAGAGATTAAAGATGTAAGTCCCACTGTGAAGCCAGCTGGCACACCGT 2820
Query 2564 CTCTATGCAAGGCTACAGATAAGTTGGGTAATGGGAATCTTAATAATTCAACCGAGGTAG 2623
|||||||||||||||||||||||||||| ||||||| | |||||||||| || |||||||
Sbjct 2821 CTCTATGCAAGGCTACAGATAAGTTGGGAAATGGGAGTTTTAATAATTCGACGGAGGTAG 2880
Query 2624 ACAAGA---TGGAAGTTCACATAACACTGAAGAATGATTACCTGTACTCGAAAGATCCTA 2680
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2881 ACAAGAAGATGGAAGTTCACATAACACTGAAGAATGATTACCTGTACTCGAAAGATCCTA 2940
Query 2681 TGATGAGTAGAACTTCCACTTCTTCAAACAACGGAAACATTGAATCCTCCTCGTTGTCTG 2740
|||||||||||| ||| | ||| |||||| |||||||| |||||||||||| ||||||
Sbjct 2941 TGATGAGTAGAAGTTCTAGTTC---AAACAATGGAAACATCGAATCCTCCTCGATGTCTG 2997
Query 2741 ATTCCGAAGATGCCAGTCAGCAATCTGAAGGAAGAGAGAATCTAGTGGATA-T--G--C- 2794
||||||||| ||||||||||||||||||||||||||||||||||||||||| | | |
Sbjct 2998 ATTCCGAAGTTGCCAGTCAGCAATCTGAAGGAAGAGAGAATCTAGTGGATACTCAGAACG 3057
Query 2795 -----CC-GACTGTCACGAGAAGATGGTAGAGAAAGTGACAGAGATGAGTATGGATGAAA 2848
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3058 ATATGCCCGACTGTCACGAGAAGATGGTAGAGAAAGTGACAGAGATGAGTATGGATGAAA 3117
Query 2849 GAGATGTTTTAAGGATTAAGAATATGTCTAACCTTCCAGCTGACAACGGGGAAAGTAAAT 2908
|||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct 3118 GAGATGTTTTAAAGATTAAGAATATATCTAACCTTCCAGCAGACAACGGGGAAAGTAAAT 3177
Query 2909 TATCAGGAACTCCTTTTGTGGTTCCTAGCCAAAACATGGAAAATATGGTACCTGGTGTTA 2968
||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||
Sbjct 3178 TATCAGGAACTCCTTTTATGGTTCCTAGCCAAAACATGGAAAATATGGTACCAGGTCTTA 3237
Query 2969 ATACTGGTTCCTACCTATCCCAGCCACAAAACATGATGTTCCCCCAGATGCTTAACCAGA 3028
|||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct 3238 ATACTGGTTCCTACCTGTCCCAGCCACAAAACATGATACTCCCCCAGATGCTTAACCAGA 3297
Query 3029 GTATACCATTGCCAGTCTTCCAGACTCCTTCAACAATGGGTTACTATCATCAAGCTCCAG 3088
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 3298 GTATACCATTGCCAGTCTTCCAGGCTCCTTCAACAATGGGTTACTATCATCAAGCTCCAG 3357
Query 3089 TCTCTTGGTCTTCAGCTCCAGCCAACGGATTAATGCAATTCCCTCATCCTAACCATTATG 3148
||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||
Sbjct 3358 TCTCTTGGTCTTCAGCTTCAACCAACGGATTAATGCAATTCCCTCATCCTAACCACTATG 3417
Query 3149 TATACACTGGTCCTCTTGGATACAGTCTGAATGGAGAGTCTCCTTTATGCGTGCAGTACG 3208
||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 3418 TATACACTGGTCCCCTTGGATACAGTCTGAATGGAGAGTCTCCTTTATGCATGCAGTACG 3477
Query 3209 GGACCCCATTGAGCCATTCAGCAGCCCCTTTCTTCAATTCCGGGCCAGTTCCAGTTTTCC 3268
|||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct 3478 GGACCCCATTGAACCATTCAGCAGCTCCTTTCTTCAATTCCGGGCCAGTTCCAATTTTCC 3537
Query 3269 ATCCGTATGCTGAAACCACCACAATGAACACTGTTGACCAAGCTCAAGCTCTTGAGCCAT 3328
|||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct 3538 ATCCGTTTGCTGAAACCAACACAATGAACACTGTTGACCAAGCTCAACCTCTTGAGCCAT 3597
Query 3329 TGGAACACAGTTTTCTGAAGGAAGCAAATGAGAGGA-AGTTAAACGAAATGCCTCCAATG 3387
|||||||||||||| ||||||||||||||||||||| | |||| |||||||||| ||||
Sbjct 3598 TGGAACACAGTTTTTTGAAGGAAGCAAATGAGAGGAGATTTAA-CGAAATGCCTTTAATG 3656
Query 3388 GAAACTCCAAGGAGAGGAGGTCTACAA-CATGATAGTGATGAGAACTTCTCCTTGTTCCA 3446
||||||||||||| | || ||| |||| | ||||||||||||||||||||||||||||||
Sbjct 3657 GAAACTCCAAGGAAAAGATGTCCACAAAC-TGATAGTGATGAGAACTTCTCCTTGTTCCA 3715
Query 3447 CTTTGGTGGCCCGGTTGCTCTGTCCACAGGAAGTAAATCGAATCCTGCTCGTTCGAAAGA 3506
||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||
Sbjct 3716 CTTTGGTGGCCCGGTTGCTCTGTCCACAGGAAGTAAAGCGAATCCTGCTCGATCCAAAGA 3775
Query 3507 TGGGATTTTGGGGGATTTCTCGTTGCAATTCTCAGGAGATCATGTTTTTAGTGATCCAAC 3566
||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct 3776 TGGGATTTTGGAGGATTTCTCGTTGCAGTTCTCAGGAGATCATGTTTTTGGTGATCCAAC 3835
Query 3567 CGGCAATAGCAAGAAGGAGAAGGAGAACACAGTTGGTGAAGAGTACAACTTGTTTGCGAA 3626
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 3836 CGGCAATAGCAAGAAGGAGAAAGAGAACACAGTTGGTGAAGAGTACAACTTGTTTGCGAC 3895
Query 3627 AAGTAACAGTTTGAGGTTTTCTATCTTCTAA 3657
|||||||||||||||||||||||||||||||
Sbjct 3896 AAGTAACAGTTTGAGGTTTTCTATCTTCTAA 3926
> AT3G58050.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT2G41960.1);
Has 13384 Blast hits to 8116 proteins in 546 species: Archae
- 41; Bacteria - 766; Metazoa - 5596; Fungi - 1431; Plants
- 589; Viruses - 46; Other Eukaryotes - 4915 (source: NCBI
BLink). | chr3:21492539-21497157 FORWARD LENGTH=3769
Length=3769
Score = 1218 bits (659), Expect = 0.0
Identities = 1301/1603 (81%), Gaps = 75/1603 (5%)
Strand=Plus/Plus
Query 731 CTTA-CAGATTCGACTGCAAGAAG-TTTTGTAGAGACTGCAGAAGAAATGTTATTCGGGA 788
|||| || ||||||| ||||| || |||||||||||||||||| |||| |||||||| ||
Sbjct 802 CTTACCAAATTCGACAGCAAG-AGATTTTGTAGAGACTGCAGACGAAACGTTATTCGTGA 860
Query 789 GTTTAAAGAACTTAAGGAACTTAAACGAATGCAGAGAGAACCAAGATGTACCGAC-TGGT 847
||| ||||| ||||||||||| |||||||||| ||||||||| | |||||| || ||||
Sbjct 861 GTTCAAAGAGCTTAAGGAACTGAAACGAATGCGGAGAGAACCTCGGTGTACC-ACATGGT 919
Query 848 TTTGTGTTGCCGATACAGCCTTTCAGTATGAGGTGGACATTGATTCCGTCCGAGCAAATT 907
||||||||||| ||||| | || || |||||||| ||||||||| || |||| | |
Sbjct 920 TTTGTGTTGCCAATACAACATTCCAATATGAGGTATCCATTGATTCGGTGAAAGCAGACT 979
Query 908 GG-AGTCAACATTTTACAGAGAATGCTGG--A-TATCATCAATTCGAGTGGGCTATTGGA 963
|| | ||| |||| | ||||||||||| | || ||||| || |||||||| ||||||
Sbjct 980 GGCGGGAAAC-TTTTTCTGAGAATGCTGGAAAGTACCATCACTTTGAGTGGGCAATTGGA 1038
Query 964 ACTGGAGAAGGCGAATCTGATATCCGCGAG-TTCAAATACGTAGGCAATG-ATCGGAGTG 1021
| |||||||| ||| |||||||| | || || ||| | || ||| ||| || |||| |
Sbjct 1039 TCCGGAGAAGGAAAATGTGATATCCTCAAGTTTGAAA-ATGTTGGC-ATGAATGGGAGAG 1096
Query 1022 CCCAAGTCAATGGCCTAGACCTTCGTGGATTACACGAATGCTACATTACTCTTAGGGCTT 1081
||||||||||||||| |||||||||| ||| | |||||||||||| ||||| ||||
Sbjct 1097 TTCAAGTCAATGGCCTAAACCTTCGTGGTTTAAATTCATGCTACATTACCCTTAGAGCTT 1156
Query 1082 TTaaaaaaaaTGGCCGCTCCTCGGAAATATCTGTCAAAGCCCATGCATTGAGAGGCCAAC 1141
|||| | ||||||||| || ||| |||| | ||||||||||||||| | ||| |||
Sbjct 1157 ATAAATTAGATGGCCGCTGGTCTGAAGTATCCGCCAAAGCCCATGCATTAAAAGGTCAAA 1216
Query 1142 AGTGCGTTCACTCCAGGCTTGTGGTTGGGGATGGCTTTGTTTCAATTAAAAGAGGGGAAT 1201
| || |||||| |||||| || ||||||||||||||||||||||| || ||||| |||
Sbjct 1217 ACTGTGTTCACGGCAGGCTAGTAGTTGGGGATGGCTTTGTTTCAATCAAGAGAGGTGAAA 1276
Query 1202 GCATTCGAATGTTTTTTGAGCATGCTGAAGAGGCTGAGGAAGAAGAGGATGAAGTCATGA 1261
|||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1277 GCATCCGAAGGTTTTTTGAGCATGCTGAAGAGGCTGAGGAAGAAGAGGATGAAGACATGA 1336
Query 1262 TAGACAAAGATGGAAATGAGCTTGATGGTGAGTGCT-TGCGTCCACAAAAGCATGCTAAG 1320
| ||||||||||| |||||||| ||||| || |||| | ||||||||||||||||| ||
Sbjct 1337 TGGACAAAGATGGGAATGAGCTCGATGGGGAATGCTCT-CGTCCACAAAAGCATGCAAAA 1395
Query 1321 AGTCCAGAACTTGCTCGAGAGTTTCT-TCTAGATGCTGCAACGGTTATTTTCAAGGAGCA 1379
|||||||||||||||||||||||||| | ||||||||||||| |||||||| || || ||
Sbjct 1396 AGTCCAGAACTTGCTCGAGAGTTTCTAT-TAGATGCTGCAACAGTTATTTTTAAAGAACA 1454
Query 1380 GGTTGAAAAGGCATTTAGGGATGGTACAGCCCGTCAAAATGCACACAGTATATTTGTCTG 1439
||||||||| ||||| ||||| || || || || ||||||||||| ||||| ||||| ||
Sbjct 1455 GGTTGAAAAAGCATTCAGGGAGGGAACCGCTCGGCAAAATGCACATAGTATCTTTGTATG 1514
Query 1440 CCTTTCATCGAAACTATTAGAGA-AACGTGTT-CATATTGCCTGCAAGGAAATTGTCACC 1497
||| ||| |||||||||||| | ||| | || ||| ||||||||||||||||| | |||
Sbjct 1515 TCTTACATTGAAACTATTAGA-ACAACAT-TTACATGTTGCCTGCAAGGAAATTATTACC 1572
Query 1498 TTGgagaagcagaacaaacttcttgaggaagaagagaaagaaaagcgtgaagaagaggag 1557
|||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1573 TTGGAGAAACAGGTGAAACTTCTTGAGGAAGAAGAGAAAGAAAAGCGTGAAGAAGAGGAG 1632
Query 1558 cgaaaaga-aaggaaaagaaataaagaaaaggagaaaaaacttcgtagaaaggagagatt 1616
|| || || ||| |||||| ||||| | ||||||||||||||| | ||||||||||||
Sbjct 1633 CGGAAGGAGAAG-AAAAGATCCAAAGAGAGGGAGAAAAAACTTCGCAAAAAGGAGAGATT 1691
Query 1617 gaaggaaaaagaacga-gaaaaagagcagaagaatccaaaaTTTAGTGATAAAG-CAATA 1674
|||||||||||| | | | || ||| |||| || || ||| ||| ||||||| || |
Sbjct 1692 GAAGGAAAAAGA-CAAAGGCAAGGAGAAGAAAAACCCTGAATGTAGCGATAAAGACA-TG 1749
Query 1675 CTGCCAAATATG-TCAAGGGAAGAAGAATGCTCT-CCAAATCTTGATGAGGAAAATAACA 1732
|||| ||| | ||||||||||||||| | ||| ||||| ||| |||| || | ||||
Sbjct 1750 CTGCTGAAT-TCATCAAGGGAAGAAGAA-GATCTTCCAAACCTTTATGATGAGACGAACA 1807
Query 1733 ATACCATAAG-ATGCGAGGAGTCCGGAATTGAAAATGGAAATGTAGATTTGTCTTCACCT 1791
||||||||| | |||||||||| | |||||||| || ||| |||||||||| |||||
Sbjct 1808 ATACCATAAACA-GCGAGGAGTCAGAAATTGAAACGGGGTATGCAGATTTGTCTCCACCT 1866
Query 1792 GGTTCTCCTGATGATCAAGATGAAGA--GTGTTTGGATGGTTGCGCTTCTCCAAGAGCTG 1849
||||||||||||| |||||| |||| |||||||||||||||| ||||||||||||| |
Sbjct 1867 GGTTCTCCTGATGTTCAAGA--AAGACAGTGTTTGGATGGTTGCCCTTCTCCAAGAGCGG 1924
Query 1850 AAACCCACT-CTTGTGATAGCAC-TGATAGGGAGATTATAGATCATGAAGATGAAAACG- 1906
||| ||||| || |||| || || ||| || || |||| ||||| ||||||||| || |
Sbjct 1925 AAAACCACTACT-GTGACAG-ACCTGACAGAGATATTAAAGATCTTGAAGATGAGAATGT 1982
Query 1907 GCTGCTTTACACATGAAAATCCAAGACCTGCTCATCAGA-CAGCAAGATTAT-GGAAAGA 1964
| | ||||||| |||| ||| || ||||| ||| |||| | ||||||| || |||||||
Sbjct 1983 G-TACTTTACAAATGATCATCAAAAACCTGTTCACCAGAAC-GCAAGAT-ATTGGAAAGA 2039
Query 1965 GGCT-CAGACTGATCATGCTTTGAGATGGTCAGAAAAACGCAGAT-TTACAGAGAATGCT 2022
| | ||| ||||| |||||||||| |||||||| |||||||||| || |||| ||||||
Sbjct 2040 AG-TGCAGTCTGATAATGCTTTGAGGTGGTCAGATAAACGCAGATATT-CAGATAATGCT 2097
Query 2023 TCTTCTGTCAGTAG-TGCTGAGGCAGGATACTGTAATGATAGATTAGAAATGCCTTCACG 2081
|||| ||||||||| | | |||||| ||||| ||||||||||||||||| |||||||| |
Sbjct 2098 TCTTTTGTCAGTAGGT-CAGAGGCAAGATACCGTAATGATAGATTAGAAGTGCCTTCAAG 2156
Query 2082 AC-ACTTCAATGGGTCAGATAAAAATTTGAGAGTGAAAGCTTTGAAA-ACTGGTGGTAGC 2139
| |||||||||||| | | | | || |||||||| |||| ||| |||||||| |
Sbjct 2157 GGGA-TTCAATGGGTCAAACAGACAGTTAAGAGTGAATGCTTC-AAAGACTGGTGG---C 2211
Query 2140 CCAGA-TAGCATTAGGTCTCATGAGGAGTTTCAGTGTT-CAGACGACAGGA-CTGGGGAG 2196
| || | | || | |||||||||| ||||||| |||| | ||| |||| | | | | ||
Sbjct 2212 CT-GAATGGTATCAAGTCTCATGAGAAGTTTCAATGTTGC-GACAACAGAATCAGTG-AG 2268
Query 2197 AGGTATGATCACCA-TTCTTGCAGTTGCAAACCCA-TTAATGGTTACCGGG-AAAATGTA 2253
|||| ||| | || |||||||||||||||||| | || || || |||| |||| |||
Sbjct 2269 AGGTTTGA-CTTCAGTTCTTGCAGTTGCAAACCAAGTTG-TGAATATCGGGCAAAA-GTA 2325
Query 2254 GAGTCTAAT-CTATCTGCAACCAGAGGCATGCGAGAACCCAAA 2295
|| |||| | ||| | ||||| ||| ||||||||| |||
Sbjct 2326 GAACCTAAAACCG-CTGGATCCAGAAGCACGCGAGAACCAAAA 2367
Score = 106 bits (57), Expect = 2e-21
Identities = 77/87 (89%), Gaps = 0/87 (0%)
Strand=Plus/Plus
Query 2700 TTCTTCAAACAACGGAAACATTGAATCCTCCTCGTTGTCTGATTCCGAAGATGCCAGTCA 2759
||| |||||||||||||||| |||||||||||| |||||||| ||||| ||||||||
Sbjct 2829 TTCGTCAAACAACGGAAACACTGAATCCTCCTCCACATCTGATTCTGAAGACGCCAGTCA 2888
Query 2760 GCAATCTGAAGGAAGAGAGAATCTAGT 2786
|||||||||||||||||||| | ||||
Sbjct 2889 GCAATCTGAAGGAAGAGAGAGTATAGT 2915
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 182106003090
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5