BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg322141
Length=1074
Score E
Sequences producing significant alignments: (Bits) Value
AT2G44800.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-depen... 1720 0.0
AT3G60290.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-depen... 992 0.0
AT2G44798.1 | Symbols: | other RNA | chr2:18466464-18469295 RE... 497 7e-140
> AT2G44800.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein | chr2:18466820-18468551
FORWARD LENGTH=1258
Length=1258
Score = 1720 bits (931), Expect = 0.0
Identities = 1028/1075 (96%), Gaps = 6/1075 (1%)
Strand=Plus/Plus
Query 1 ATGGAGGAAACGAAAAA-GAGTTTGCTTGATGATTCTTTTACAAGTGCAATGACACTTAC 59
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 185 ATGGAGGAAAC-AAAAATGAGTTTGCTTGATGATTCTTTTACAAGTGCAATGACACTTAC 243
Query 60 CAATTCAGGTGTGCCTCAAGTCCCTGATCGTTACGTTCTTCCCCCTTCGCAAAGGCCAGC 119
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 244 CAATTCAGGTGTGCCTCAAGTCCCTGATCGCTACGTTCTTCCTCCTTCGCAAAGGCCAGC 303
Query 120 TCTTGGTTCAAGCTTAGGCACCA-CTGAGACAACACTTCCTGTCATTGATCTCTCTCTTC 178
||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||
Sbjct 304 TCTTGGTTCAAGCTTAGGCACCAGC-GAGACTACACTTCCTGTCATTGATCTCTCTCTTT 362
Query 179 TAAACCAACCTCTGCTTAGATCCCGCGCAATCCACGAGATTAGCATGGCCTGCAAGGAGT 238
| |||||||| | ||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct 363 TGCACCAACCTTTCCTTCGATCCCTCGCAATCCACGAGATTAGCATGGCCTGCAAGGAGT 422
Query 239 TTGGTTTCTTTCAGGTTAGAAACCATGGAATACCATCATCAGTGGTTAAAGATGCCTTTG 298
|||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |
Sbjct 423 TTGGTTTCTTTCAGGTTATAAACCATGGAATACCATCATCAGTGGTTAACGATGCCTTAG 482
Query 299 ATGCAGCAACACAGTTCTTTGACTTACCTGTGGAGGAGAAGATGCTTCTGGTGTCTGCAA 358
||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct 483 ATGCAGCAACACAGTTCTTCGACTTACCTGTGGAAGAGAAGATGCTTCTGGTGTCTGCAA 542
Query 359 ATGTTCATGAGCCAGTAAGGTATGGCACAAGCCTTAACCATTCCACAGACAGAGTTCACT 418
| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct 543 ACGTTCATGAGCCAGTCAGGTATGGCACAAGCCTTAACCATTCAACAGACAGAGTTCACT 602
Query 419 ACTGGAGAGATTTCATCAAGCATTACTCTCATCCACTCTCAAAGTGGATCAATATGTGGC 478
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 603 ACTGGAGAGATTTCATCAAGCATTACTCTCATCCACTCTCAAAGTGGATCGATATGTGGC 662
Query 479 CATCAAATCCTCCATGCTACAAGGATAAAGTGGGCAAGTATGCAGAGGCAACACATGTGC 538
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 663 CATCAAATCCTCCATGCTACAAGGATAAAGTGGGCAAGTATGCAGAGGCAACACATTTGC 722
Query 539 TACATAAGCAATTAATAGAAGCTATCTCAGAAAGCCTGGGACTGGAGAAAAATTACTTAC 598
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 723 TACACAAGCAGTTAATAGAAGCTATCTCAGAAAGCCTGGGACTGGAGAAAAATTACTTAC 782
Query 599 AAGAAGAGATTGAAGGAGGCTCACAAGTCATGGCAGTGAACTGTTATCCAGCATGTCCGG 658
|||||||||| |||| |||||||||||||||||||||||| |||||||||||||| ||||
Sbjct 783 AAGAAGAGATAGAAGAAGGCTCACAAGTCATGGCAGTGAATTGTTATCCAGCATGCCCGG 842
Query 659 AACCTGAAATCGCCTTGGGAATGCCACCACACTCAGACTTCAGCTCACTGACCATCTTAC 718
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 843 AACCTGAAATGGCCTTGGGAATGCCACCACACTCAGACTTCAGCTCACTGACCATCTTAC 902
Query 719 TTCAAAGTAGCCAGGGACTCCAGATAATGGACTGCAACAAAAACTGGGTTTGTGTGCCGT 778
|||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 903 TTCAGAGTAGCAAGGGACTCCAGATAATGGACTGCAACAAAAACTGGGTTTGTGTGCCGT 962
Query 779 ATATCGAAGGAGCTTTGATAGTTCAGCTGGGAGATCAGGTAGAAGTGATGAGCAACGGCA 838
|||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 963 ATATAGAAGGAGCTTTGATAGTTCAGCTGGGAGATCAGGTAGAGGTGATGAGCAACGGCA 1022
Query 839 TATACAAGAGTGTCATTCATCGTGTAACAGTGAACACAGATGTCAAAAGGCTATCTTTTG 898
|||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct 1023 TATACAAGAGCGTCATTCATCGTGTAACAGTGAACAAAGAAGTCAAAAGGCTATCTTTTG 1082
Query 899 CAAGTCTTCACAGTCTACCTCTGCACAAGAAAATAAGTCCAGCACCGAAACTCGTCAACG 958
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1083 CAAGTCTTCACAGTCTACCTCTGCACAAGAAAATAAGTCCAGCACCAAAACTCGTCAACC 1142
Query 959 CAAACAATACACCTGCCTACGGAGAGTTTAGTTTCAACGATTTTCTTGA-CTACATCTCA 1017
|||||||| |||| ||||| |||||||||||||||||||||||||| || ||||||||||
Sbjct 1143 CAAACAATGCACCAGCCTATGGAGAGTTTAGTTTCAACGATTTTCT-GAACTACATCTCA 1201
Query 1018 AGCAACGATTTTATACAAGAAAGATTCATTGATACAATAAAGAAGAGCAGTTCCT 1072
|||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 1202 AGCAACGATTTTATACAAGAAAGATTCATTGACACAATAAAGAAAAGCAGTTCCT 1256
> AT3G60290.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein | chr3:22282627-22284556
FORWARD LENGTH=1251
Length=1251
Score = 992 bits (537), Expect = 0.0
Identities = 905/1077 (84%), Gaps = 48/1077 (4%)
Strand=Plus/Plus
Query 1 ATGGAGGAAACGAAA-AAGAGTTTGCTTGATGATT-CTTTTACAAGTGCAAT-GACACTT 57
||||||||||| ||| |||||| || || |||||| | ||||| ||||| || || ||||
Sbjct 36 ATGGAGGAAAC-AAATAAGAGTGTGGTTAATGATTAC-TTTACCAGTGCTATGGA-ACTT 92
Query 58 ACCA-ATTCAGGTGTGCCTCAAGTCCCTGA-TCGTTACGTTCTTCCCCCTTCGCAAAGGC 115
| || | ||||||| ||||| || ||| | |||||| ||||||| ||||| ||| | |
Sbjct 93 A-CAGAGTCAGGTGACCCTCACGTGCCT-ACCCGTTACATTCTTCCACCTTCACAACGAC 150
Query 116 C-A-GCTCTTGGTTCAAGC-TTAGGCACCACTGAGACAAC-A-CTTCCTGTCATTGATCT 170
| | |||| ||| ||||| || ||||||| | | || | | |||||||||||||||||
Sbjct 151 CAATGCTC--GGTCCAAGCATT-GGCACCAGT-A-CCATCAATCTTCCTGTCATTGATCT 205
Query 171 CTCTCTTC-TAAACCAACCTCTGCTTAGATC-CCGCG-CAATCCACGAGATTAGCA-TGG 226
||| |||| || || | ||| |||||||| | | | | ||||| |||||| | | |||
Sbjct 206 CTC-CTTCTTACACGATCCTTTGCTTAGA-CTATGTGTC-ATCCATGAGATT-GAATTGG 261
Query 227 CCTGCAA-GGAGTTTGGTTTCTTTCAGGTTAGAAACCATGGAATACCATCATCAGTGGTT 285
||||||| ||| ||||||||||||||||||| ||||||||||||| ||||| |||||||
Sbjct 262 CCTGCAAGGGA-TTTGGTTTCTTTCAGGTTATAAACCATGGAATATCATCAGCAGTGGTG 320
Query 286 AAAGATGC-CTTTGATGCAGCAACACA-GTTCTTTGACTTACCTGTGGAGGAGAAGATGC 343
|||||||| | ||| |||| ||| | ||||||||||||||||| || ||||||||||
Sbjct 321 AAAGATGCAC-AAGATTCAGCTACA-AGGTTCTTTGACTTACCTGCCGATGAGAAGATGC 378
Query 344 TTCTGGTGTCTGCA-AATGTTCATGAGCCAGTAAGGTATGGCACAAGCCTTAACCATTCC 402
|||||| |||| | ||| |||| ||||||||||||||||| || ||| | ||||||||
Sbjct 379 ATCTGGTTTCTG-ATAATTTTCAGGAGCCAGTAAGGTATGGTACCAGCATAAACCATTCA 437
Query 403 ACAGACAGAGTTCACTACTGGAGAGATTTCATCAAGCATTACTCTCATCCACTCTCAAAG 462
|||||||||||||| ||||||||||||||||| || |||||||| ||||| ||||||||
Sbjct 438 ACAGACAGAGTTCATTACTGGAGAGATTTCATAAAACATTACTCCCATCCTCTCTCAAAC 497
Query 463 TGGATCAATATGTGGCCATCAAATCCTCCATGCTACAAGGATAAA-GTGGGCAAGTATGC 521
||||||||| ||||||| || |||||||| ||||||||||| ||| ||||| || || ||
Sbjct 498 TGGATCAATTTGTGGCCTTCCAATCCTCCCTGCTACAAGGA-AAAGGTGGGGAAATACGC 556
Query 522 AGAGGCAACACATGTGCTACATAAGCAATTAATAGAAGCTATCTCAGAAAGCCTGGGACT 581
||| ||||| ||||| ||||||||||| |||| ||||||||||||||||| || |||||
Sbjct 557 AGAAGCAACGCATGTTTTACATAAGCAACTAATTGAAGCTATCTCAGAAAGTCTAGGACT 616
Query 582 GGAGAAAAATTACTTACAAGAAGAGATTGAAGGAGGCTCACAAGTCATGGCAGTGAACTG 641
|||||||||||||||||| ||||| || |||| |||||||||||||||||| || |||||
Sbjct 617 GGAGAAAAATTACTTACAGGAAGAAATAGAAGAAGGCTCACAAGTCATGGCGGTAAACTG 676
Query 642 TTATCCAGCATGTCCGGAACCTGAAATCGCCTTGGGAATGCCACCACACTCAGACT-TCA 700
|||||||| ||||| ||||| || || ||||||||||||||||||||||| |||| |
Sbjct 677 CTATCCAGCTTGTCCTGAACCCGAGATTGCCTTGGGAATGCCACCACACTCGGACTAT-G 735
Query 701 GCTCACTGACCATCTTACTTCAAAGTAGC-CAGGGACTCCAGATAATGGACTGCAACAAA 759
|||| ||||| |||||||| || |||||| |||| || ||||||| ||||||||||||
Sbjct 736 GCTCGCTGACAATCTTACTCCAGAGTAGCGAAGGG-CTGCAGATAAAGGACTGCAACAAC 794
Query 760 AACTGGGTTTGTGTGCCGTATATCGAAGGAGCTTTGATAGTTCAGCTGGGAGATCAGGTA 819
||||||||||||||||||||||| ||||||||| ||||||| ||| ||||||||||||||
Sbjct 795 AACTGGGTTTGTGTGCCGTATATTGAAGGAGCTCTGATAGTCCAGTTGGGAGATCAGGTA 854
Query 820 GAAGTGATGAGCAACGGCATATACAAGAGTGTCATTCATCGTGTAACAGTGAACACAGAT 879
|||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct 855 GAAGTGATGAGCAATGGCATATACAAGAGTGTGGTTCATCGTGTAACAGTGAACAAAGAT 914
Query 880 GT-CAAAAGGCTATCTTTTGCAAGTCTTCACAGTCTACCTCTGCACAAGAAAATAAGTCC 938
| ||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 915 -TACAAGCGGCTCTCTTTTGCAAGTCTTCACAGTCTACCTATGCACAAGAAAATAAGTCC 973
Query 939 AGCACCGAAACTCGTCAACGCAAACAATAC-ACCTGCCTACGGAGAGTTTAGTTTCAACG 997
|||| | | |||||||| | ||| || || | |||| || ||||| || || |||||||
Sbjct 974 AGCAACTCAGCTCGTCAATGAAAATAA-ACCAGCTGCATATGGAGAATTCAGCTTCAACG 1032
Query 998 ATTTTCTTGACTACATCTCAAGCAACGATTTTATACAAGAAA-GATTCATTGATACA 1053
|||||||||| || || || || |||||| ||| ||| |||| ||||||||||||||
Sbjct 1033 ATTTTCTTGATTATATATCCAGAAACGATATTACACA-GAAAAGATTCATTGATACA 1088
> AT2G44798.1 | Symbols: | other RNA | chr2:18466464-18469295
REVERSE LENGTH=1057
Length=1057
Score = 497 bits (269), Expect = 7e-140
Identities = 298/312 (96%), Gaps = 1/312 (0%)
Strand=Plus/Minus
Query 623 AAGTCATGGCAGTGAACTGTTATCCAGCATGTCCGGAACCTGAAATCGCCTTGGGAATGC 682
|||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||
Sbjct 465 AAGTCATGGCAGTGAATTGTTATCCAGCATGCCCGGAACCTGAAATGGCCTTGGGAATGC 406
Query 683 CACCACACTCAGACTTCAGCTCACTGACCATCTTACTTCAAAGTAGCCAGGGACTCCAGA 742
|||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct 405 CACCACACTCAGACTTCAGCTCACTGACCATCTTACTTCAGAGTAGCAAGGGACTCCAGA 346
Query 743 TAATGGACTGCAACAAAAACTGGGTTTGTGTGCCGTATATCGAAGGAGCTTTGATAGTTC 802
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 345 TAATGGACTGCAACAAAAACTGGGTTTGTGTGCCGTATATAGAAGGAGCTTTGATAGTTC 286
Query 803 AGCTGGGAGATCAGGTAGAAGTGATGAGCAACGGCATATACAAGAGTGTCATTCATCGTG 862
||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct 285 AGCTGGGAGATCAGGTAGAGGTGATGAGCAACGGCATATACAAGAGCGTCATTCATCGTG 226
Query 863 TAACAGTGAACACAGATGTCAAAAGGCTATCTTTTGCAAGTCTTCACAGTCTACCTCTGC 922
|||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct 225 TAACAGTGAACAAAGAAGTCAAAAGGCTATCTTTTGCAAGTCTTCACAGTCTACCTATGA 166
Query 923 A-CAAGAAAATA 933
| ||| ||||||
Sbjct 165 ATCAACAAAATA 154
Score = 344 bits (186), Expect = 1e-93
Identities = 203/211 (96%), Gaps = 1/211 (0%)
Strand=Plus/Minus
Query 325 CCTGTGGAGGAGAAGATGCTTCTGGTGTCTGCAAATGTTCATGAGCCAGTAAGGTATGGC 384
|||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct 679 CCTGTGGAAGAGAAGATGCTTCTGGTGTCTGCAAACGTTCATGAGCCAGTCAGGTATGGC 620
Query 385 ACAAGCCTTAACCATTCCACAGACAGAGTTCACTACTGGAGAGATTTCATCAAGCATTAC 444
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 619 ACAAGCCTTAACCATTCAACAGACAGAGTTCACTACTGGAGAGATTTCATCAAGCATTAC 560
Query 445 TCTCATCCACTCTCAAAGTGGATCAATATGTGGCCATCAAATCCTCCATGCTA-CAAGGA 503
|||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||
Sbjct 559 TCTCATCCACTCTCAAAGTGGATCGATATGTGGCCATCAAATCCTCCATGCTTTCAGGGA 500
Query 504 TAAAGTGGGCAAGTATGCAGAGGCAACACAT 534
|||||||||||||||||||||||||||||||
Sbjct 499 TAAAGTGGGCAAGTATGCAGAGGCAACACAT 469
Score = 252 bits (136), Expect = 6e-66
Identities = 161/173 (93%), Gaps = 2/173 (1%)
Strand=Plus/Minus
Query 59 CCAATTCAGGTGTGCCTCAAGTCCCTGATCGTTACGTTCTTCCCCCTTCGCAAAGGCCAG 118
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 847 CCAATTCAGGTGTGCCTCAAGTCCCTGATCGCTACGTTCTTCCTCCTTCGCAAAGGCCAG 788
Query 119 CTCTTGGTTCAAGCTTAGGCACCA-CTGAGACAACACTTCCTGTCATTGATCTCTCTCTT 177
|||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||
Sbjct 787 CTCTTGGTTCAAGCTTAGGCACCAGC-GAGACTACACTTCCTGTCATTGATCTCTCTCTT 729
Query 178 CTAAACCAACCTCTGCTTAGATCCCGCGCAATCCACGAGATTAGCATGGCCTG 230
| |||||||| | ||| |||||| |||||||||||||||||||||||||||
Sbjct 728 TTGCACCAACCTTTCCTTCGATCCCTCGCAATCCACGAGATTAGCATGGCCTG 676
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 52610171160
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5