BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg322211
Length=1542
Score E
Sequences producing significant alignments: (Bits) Value
AT2G45580.1 | Symbols: CYP76C3 | cytochrome P450, family 76, su... 2368 0.0
AT2G45560.1 | Symbols: CYP76C1 | cytochrome P450, family 76, su... 239 7e-62
AT2G45550.1 | Symbols: CYP76C4 | cytochrome P450, family 76, su... 222 7e-57
> AT2G45580.1 | Symbols: CYP76C3 | cytochrome P450, family 76,
subfamily C, polypeptide 3 | chr2:18782325-18784347 REVERSE
LENGTH=1672
Length=1672
Score = 2368 bits (1282), Expect = 0.0
Identities = 1456/1542 (94%), Gaps = 4/1542 (0%)
Strand=Plus/Plus
Query 1 ATGGACCTCTCACTAATTCAAGGCATGTCTCTGCCCCTCTATTTTCTCATAACATTCTTC 60
||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||
Sbjct 62 ATGGACCTCTCACTAATTCAAGGCATGTCTCTGCCTCTCTATTTTCTCTTAACATTATTC 121
Query 61 TTTTTCTTCTTTGCCACCGCAAAAACGCGGAGAAGCTCTAGCACCGGCACGCTTCCACCG 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 122 TTTTTCTTCTTTGCTACCGCAAAAACGCGGAGAAGCTCTAGCACCGGCACGCTTCCACCG 181
Query 121 GGTCCTCCGACACTGCCATTGGTTGGAAACATATTCCAACTCGGATTCAATCCTCACCGT 180
|||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 182 GGTCCTCCGATACTGCCATTGGTCGGAAACATATTCCAACTCGGATTCAATCCTCACCGT 241
Query 181 TCGCTTGCTGCCTTTTCGAAAACATACGGACCTCTAATGAGTTTGAAGCTTGGAAGGTTA 240
|| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct 242 TCACTTGCTGCCTTTTCGAAAACGTACGGACCTATAATGAGTTTGAAGCTTGGAAGGTTA 301
Query 241 ACCGCAGTGGTTATATCTTCACCAGAAGCAGCTAAAGAGGCACTTAGAACACACGACCAT 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 302 ACCGCAGTGGTTATATCTTCACCAGAAGCAGCTAAAGAGGCACTTAGAACACACGACCAT 361
Query 301 GTCATGTCCGCTCGAACCTTTAACGACCCTATTCGAGCCTTTGATCACCATAAACATTCC 360
||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 362 GTCATGTCCGCTCGAACCTTTAACGACGCTCTTCGAGCCTTTGATCACCATAAACATTCT 421
Query 361 ATTGTCTGGATTCCTCCCTCGGCTCGTTGGAGGTTTCTGAAGAAAACACTAACGAAATAT 420
|||||||||||||| ||||| ||||||||||||||||||||||||||| |||| ||||||
Sbjct 422 ATTGTCTGGATTCCCCCCTCTGCTCGTTGGAGGTTTCTGAAGAAAACAATAACAAAATAT 481
Query 421 TTGTTATCACCGAAAAACCAAGATGCTATTCAATCTTTAAGGATGAGAAAGGTGGAGGAA 480
|||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct 482 TTGTTATCACCGCAAAACTTAGATGCTATTCAATCTTTAAGAATGAGAAAGGTGGAGGAA 541
Query 481 CTAGTGGGCTTAGTAAACCAATTTCGCGAGAGAGGAGAAGCTATTGACCTGGCTCGTGCT 540
|||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 542 CTAGTGAGTTTAGTAAATGAATTTCGCGAGAGAGGAGAAGCTATTGACCTGGCTCGTGCT 601
Query 541 TCCTTCGTCACATCTTTCAATATCATCTCAAATGCTCTGTTTTCAGTAGATTTAGCGGCG 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 602 TCCTTCGTCACATCTTTCAATATCATCTCAAATGCTCTGTTTTCAGTAGATTTAGCGACG 661
Query 601 TATGACTCTAACTCCTCGTCTTACGAATTTCACAACACGGTTGTTCGCCTGATGGAGATC 660
|||||||||||||||||||||||||||||||||||||| || |||| ||||| ||| |||
Sbjct 662 TATGACTCTAACTCCTCGTCTTACGAATTTCACAACACAGTGGTTCACCTGACGGATATC 721
Query 661 TCCGGTAAACCCAACGTAGGAGACTATTTCCGGTATATGAGGTTTCTTGATTTGCAAGGT 720
|||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 722 GCCGGTATACCCAACGTAGGAGACTATTTCCAGTATATGAGGTTTCTTGATTTGCAAGGT 781
Query 721 ATCCG-AAAAGAAGCGGTGCTCTGCATAGAGAGATTGTTTAGGGTTATCCAAGAATTCAT 779
| ||| |||| ||||||||||||||||||||| ||||||||||||| | |||||||||||
Sbjct 782 ACCCGGAAAA-AAGCGGTGCTCTGCATAGAGAAATTGTTTAGGGTTTTTCAAGAATTCAT 840
Query 780 TGATGCTCGGTTAGCCAAAAGATTGTCTCAGAAAGAGACAGAGCCTAAAGAGGCTTCAAG 839
||||||||| |||||||||||||| |||| || ||||| |||||||||||||||||||||
Sbjct 841 TGATGCTCGATTAGCCAAAAGATTTTCTCGGACAGAGAAAGAGCCTAAAGAGGCTTCAAG 900
Query 840 CATGGACATGCTAGACTCCCTTCTGGATCTCACACAGCAAAACGAAGCAGAATTAACCAT 899
||| || |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 901 CATCGATATGCTAGACTCCCTTCTGGATCTCACACAGCAAAACGAAGCAGAATTAACAAT 960
Query 900 GAATGA-CATCAAACACTTGCTTCTCGATGTGTTTGTTGCTGGTACAGATACAAACTCAA 958
|||||| | ||||||||||||||||||||||||||||||| || ||||| |||||||| |
Sbjct 961 GAATGATC-TCAAACACTTGCTTCTCGATGTGTTTGTTGCGGGCACAGACACAAACTCTA 1019
Query 959 GTACAATGGAGTGGGCAATGACGGAGTTATTCCGTAGCCCGGAGAAGATGGTTAAAGCTC 1018
|||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||| |
Sbjct 1020 GTACAATGGAATGGGCAATGACGGAGTTATTCCGTAGCACGGAGAAGATGGTCAAAGCAC 1079
Query 1019 AGAGTGAGATACGGCAAGTGATTGGTGAAAACGGTGTCGTTCAAGAATCTGATATCCCGA 1078
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 1080 AGAGTGAGATACGGCAAGTGATTGGTCAAAACGGTTTCGTTCAAGAATCTGATATCCCGA 1139
Query 1079 GTCTGCCTTACTTACAAGCAATTGTGAAAGAGACTCTTCGTTTGCATCCTGCAGCTCCTT 1138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1140 GTCTGCCTTACTTACAAGCAATTGTGAAAGAGACTCTTCGTTTGCATCCTGCAGCTCCTT 1199
Query 1139 TGATCCCTAGAAAATCGGAATCCGATGTTCAGATTTTGGGTTTCCTCGTTCCTGAGAACA 1198
|||||||||||||||| |||||||||||||||||| |||||||||| |||||| | ||||
Sbjct 1200 TGATCCCTAGAAAATCAGAATCCGATGTTCAGATTATGGGTTTCCTTGTTCCTAAAAACA 1259
Query 1199 CCCAGGTTCTAGTGAACGTCTGGGCCATAGGACGAGACTCGAGCGTGTGGGATAATCCAA 1258
|||||||| | |||||||| ||||| |||||||||||| ||||||||||||| |||||||
Sbjct 1260 CCCAGGTTGTTGTGAACGTATGGGCGATAGGACGAGACGCGAGCGTGTGGGAAAATCCAA 1319
Query 1259 TGAAGTTCGAGCCAGAGAGATTCTTGTTACGAGAAACCGATCTAAAAGGCAAAGATTTTG 1318
||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||| |
Sbjct 1320 TGAAGTTCGAGCCAGAGAGGTTCTTGTTACGAGAAACCGATGTAAAAGGCAGAGATTTCG 1379
Query 1319 AGTTGATACCATTTGGGTCAGGAAGAAGGATGTGTCCGGGAATCTCGATGGCTCTTAAGA 1378
|||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1380 AGTTGATACCGTTTGGATCAGGAAGAAGGATGTGTCCGGGAATCTCGATGGCTCTTAAGA 1439
Query 1379 CAATGCATATGGTGCTTGCCTCTCTTCTTTATTCCTTTGACTGGAAGCTTCCAAACGGCG 1438
|||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |
Sbjct 1440 CAATGCATATGGTGCTTGCCTCTCTTCTCTATTCCTTTGACTGGAAGCTTCAAAACGGTG 1499
Query 1439 TCGTCCCTGAAAACATAGACATGAGCGAGGCTTTCGGTCTTACCTTGCACAAGGCCAAAC 1498
||||||| | |||||| |||||||||||| |||||||||||||||| ||||||||||||
Sbjct 1500 TCGTCCCCGGAAACATTGACATGAGCGAGACTTTCGGTCTTACCTTACACAAGGCCAAAT 1559
Query 1499 CTCTTTGTGCCGTACCCGTCAAGAATCCTACAATATCGTCTT 1540
||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1560 CTCTTTGTGCCGTACCCGTCAAGAAACCTACAATATCGTCTT 1601
> AT2G45560.1 | Symbols: CYP76C1 | cytochrome P450, family 76,
subfamily C, polypeptide 1 | chr2:18776052-18778510 REVERSE
LENGTH=2034
Length=2034
Score = 239 bits (129), Expect = 7e-62
Identities = 452/602 (75%), Gaps = 45/602 (7%)
Strand=Plus/Plus
Query 946 GATACAAACTCAAGTACAATGGAGTGGGCAATGACGGAGTTA-TTCCGTAGCCCGGAGAA 1004
||||||| ||| ||||| |||||||||||||||| |||||| || | ||| | ||
Sbjct 1096 GATACAAGCTCTAGTACCCTGGAGTGGGCAATGACAGAGTTACTT-AAAAACCC-TAAAA 1153
Query 1005 -GATGGTTAAAGCTCAGAG-TGAGATACG-GCAAGTGATTGGTGAAAACGGTGTCGTTCA 1061
||||| ||||||||| | ||||| || ||||| ||| |||||||| ||||| |
Sbjct 1154 CGATGGCGAAAGCTCAG-GCCGAGAT-CGATTGTGTGATAGGTCAAAACGGTATCGTTGA 1211
Query 1062 AGAATCTGATATC-CCGAGTCTGCCTTACTTACAAGCAATTGTGAAAGAGACTCTT-CGT 1119
||| || |||||| || | ||||| || ||||||||| | ||||| || ||| || ||
Sbjct 1212 AGAGTCAGATATCTCC-AAACTGCCGTATTTACAAGCAGTCGTGAAGGAAACT-TTCCGG 1269
Query 1120 TTGCAT---CCTG--CAGCTCCTTTGATCCCTAGAAAATCGGAATCCGATGTTCAGATT- 1173
|| ||| |||| | ||| | || ||||| ||||| | |||||||||| |||||
Sbjct 1270 TTACATACGCCTGTTCCGCTTC-TT-ATCCCGCGAAAAGCCGAATCCGATGCGGAGATTC 1327
Query 1174 TTGGGTTTCCTCGTTCCTGAGA-ACACCCAGGTTCTAGTGAACGTCTGGGCCATAGGACG 1232
|| |||||| | | | || | | | || ||||||||||||||||||||||||||||||||
Sbjct 1328 TT-GGTTTCAT-GGTGCTTAAAGATACTCAGGTTCTAGTGAACGTCTGGGCCATAGGACG 1385
Query 1233 AGACTCGAGCGTGTGGGATAATCCAATGA-AGTTCGAGCCAGAGAGATTCTTGTT-ACGA 1290
|||| ||||||||||||||||||| | |||| ||||||||||| || ||| | |
Sbjct 1386 AGACCCGAGCGTGTGGGATAATCCG-TCCCAGTTTGAGCCAGAGAGGTTTTTGGGGAA-A 1443
Query 1291 GAAACCGATC-TAAAAGGCAAAGATTTTGAG-TTGATACCATTTGG-GTCAGGAAGAAGG 1347
|| | || | | | ||| | ||||| |||| || | |||||| || | | ||| | ||
Sbjct 1444 GATATGGA-CGTGAGAGGTAGAGATTATGAGCTT-ACACCATTCGGAGCC-GGACGTAGA 1500
Query 1348 ATGTGTCCGGGAAT-CTCGATGGCTCTTAAGACAATG-CATATGGTGCTTGCCTCTCTTC 1405
|| || |||||||| | | ||||| | || ||| || | | | ||||||| |||||||
Sbjct 1501 ATTTGCCCGGGAATGC-CTTTGGCTATGAAAACAGTGTC-TCTTATGCTTGCTTCTCTTC 1558
Query 1406 TTTATTCCTTTGACTGGAAGCTTCCAAACGGCGTCGTCCCTGAAAACATAGACATG-AGC 1464
||||||||||||||||||||||||| || || ||| | | || | | |||||| | |
Sbjct 1559 TTTATTCCTTTGACTGGAAGCTTCCGAAGGGTGTCCTTTCGGAGGATTTGGACATGGA-C 1617
Query 1465 GAGGC-TTTCGGTCTTACCTTGCACAAGGCCAAACCTCTTTG--TGCCGTACCCGTCAAG 1521
||| | ||| ||||| || ||||| ||| |||| || | || ||||||||||||||||
Sbjct 1618 GAGACCTTT-GGTCTAACTTTGCATAAGACCAA-CC-CGTTACATGCCGTACCCGTCAAG 1674
Query 1522 AA 1523
||
Sbjct 1675 AA 1676
> AT2G45550.1 | Symbols: CYP76C4 | cytochrome P450, family 76,
subfamily C, polypeptide 4 | chr2:18773541-18775654 REVERSE
LENGTH=1536
Length=1536
Score = 222 bits (120), Expect = 7e-57
Identities = 397/526 (75%), Gaps = 37/526 (7%)
Strand=Plus/Plus
Query 937 GCTGGTACAGATACAAACTCAAGTACAATGGAGTGGGCAATGACGGAGTTA-TTCCGTAG 995
||||| |||||||||| ||| ||||| | |||||||||||| | |||||| || | |
Sbjct 931 GCTGGCACAGATACAAGCTCTAGTACTCTAGAGTGGGCAATGGCAGAGTTACTT-AGAAA 989
Query 996 CCCGGAGAA-GATGGTTAAAGCTCAGAGTGAGATACGGCA-AGTG-ATT-GGTGAAAACG 1051
||| | || |||||| ||||||||| | ||| | || | ||| || ||| |||||
Sbjct 990 CCC-TAAAACGATGGTAAAAGCTCAG-G-CAGAGATGG-ATCGTGTGTTAGGTCAAAACA 1045
Query 1052 GTGTCGTTCAAGAATCTGATATC-C-CGAGTCTGCCTTACTTACAAGCAATTGTGAAAGA 1109
|||| || ||||| || |||||| | || | |||| || |||||||| ||||||| ||
Sbjct 1046 GTGTTGTGCAAGAGTCAGATATCTCAGGA-T-TGCCATATTTACAAGCGGTTGTGAAGGA 1103
Query 1110 GACTCTTCGTTTGCATCCTGCAGCT-C-CT--TTGATCCCTA-GAAAATCGGAATCCGAT 1164
||| || | || ||||| || ||| | || | | |||| | ||||| ||||||| |||
Sbjct 1104 AACTTTTAGGTTACATCCGGCTGCTCCGCTACTAG-TCCC-ACGAAAAGCGGAATCAGAT 1161
Query 1165 GTTCAGATT-TTGGGTTTCCTCGTTCCTGAGA-ACACCCAGGTTCTAGTGAACGTCTGGG 1222
|| || || ||||| ||| | || ||| | | | || |||||||||||||| || ||||
Sbjct 1162 GTGGAGGTTCTTGGG-TTCATGGTGCCT-AAAGATACTCAGGTTCTAGTGAATGTGTGGG 1219
Query 1223 CCATAGGACGAGACTCGAGCGTGTGGGATAATCCAATG-AAGTTCGAGCCAGAGA-GATT 1280
|||||||||||||| | ||||| ||||| ||||| | | ||||||||||||||| | ||
Sbjct 1220 CCATAGGACGAGACCCAAGCGTATGGGAGAATCCGA-GCCAGTTCGAGCCAGAGAGGTTT 1278
Query 1281 CTTGTTACGAGAAACCGATCTAAAAGGCAAAGATTTTGAG-TTGATACCATTTGG-GTCA 1338
| | | ||| | ||| | ||||| | ||||| |||| || | ||| ||||| | |
Sbjct 1279 ATGGGGA-AAGATATTGATGTGAAAGGTAGAGATTATGAGCTT-ACACCGTTTGGAG-GA 1335
Query 1339 GGAAGAAGGATGTGTCCGGGAAT-CTCGATGGCTCTTAAGACAATG-CATATGGTGCTTG 1396
||| | || || ||||||||| | | | ||||| | || ||| || | | | ||||||
Sbjct 1336 GGACGGAGAATATGTCCGGGATTGC-CTTTGGCTGTGAAAACAGTGTC-TCTTATGCTTG 1393
Query 1397 CCTCTCTTCTTTATTCCTTTGACTGGAAGCTTCCAAACGGCGTCGT 1442
| |||||||||||||||||||||||||||||||| ||||| |||||
Sbjct 1394 CTTCTCTTCTTTATTCCTTTGACTGGAAGCTTCCTAACGGTGTCGT 1439
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 76104026220
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5