BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg322224 Length=282 Score E Sequences producing significant alignments: (Bits) Value AT2G45695.1 | Symbols: | Ubiquitin related modifier 1 | chr2:1... 344 2e-94 > AT2G45695.1 | Symbols: | Ubiquitin related modifier 1 | chr2:18825993-18826879 FORWARD LENGTH=491 Length=491 Score = 344 bits (186), Expect = 2e-94 Identities = 198/204 (97%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 1 ATGCAATTAACTCTTGAATTCGGGGGTGGGTTAGAGTTGCTCTGTGATTCTGAAAAGATC 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 51 ATGCAATTAACTCTTGAATTCGGGGGTGGGTTAGAGCTGCTCTGTGATTCTGAAAAGATT 110 Query 61 CATAAAGTTAACGTTGATTTGCCCAATGGAGCTGAATCTGATGATTTCACTATGAAGCAT 120 |||||||| |||||||||||||||||||||||||| ||||||||||| || ||||||||| Sbjct 111 CATAAAGTAAACGTTGATTTGCCCAATGGAGCTGACTCTGATGATTTTACCATGAAGCAT 170 Query 121 TTGCTTTCATGGGTTCGTACAAATCTGATCAAAGAGAGACCTGAGATGTTCATGAAAGGA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 171 TTGCTTTCATGGGTTCGTACAAATCTGATCAAAGAGAGACCTGAGATGTTCATGAAAGGA 230 Query 181 GATACTGTGAGACCTGGGGTTCTT 204 |||||||||||||||||||||||| Sbjct 231 GATACTGTGAGACCTGGGGTTCTT 254 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 12969079242 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5