BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg322261
Length=1221
Score E
Sequences producing significant alignments: (Bits) Value
AT2G46070.1 | Symbols: ATMPK12, MAPK12, MPK12 | mitogen-activat... 1993 0.0
AT1G01560.2 | Symbols: ATMPK11, MPK11 | MAP kinase 11 | chr1:20... 623 1e-177
> AT2G46070.1 | Symbols: ATMPK12, MAPK12, MPK12 | mitogen-activated
protein kinase 12 | chr2:18945981-18947823 REVERSE LENGTH=1325
Length=1325
Score = 1993 bits (1079), Expect = 0.0
Identities = 1142/1173 (97%), Gaps = 2/1173 (0%)
Strand=Plus/Plus
Query 50 CAAAAGCCCTTCTTCTTGGTCTCTCTCGTTCTCGGTCTGATCATTGCATCATCATGTCTG 109
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1 CAAAAGCCCTTCTTCTTGGTTTCTCTCGTTCTCGGTCTGATCATTGCATCATCATGTCTG 60
Query 110 GAGAATCAAGCTCTGGTTCTACCGATCATTGCATCAAAGTTGTACCGACACATGGTGGCC 169
||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct 61 GAGAATCAAGCTCTGGTTCTACCGAACATTGCATCAAAGTTGTACCGACACACGGTGGCC 120
Query 170 GCTATGTTCAGTACAACGTTTATGGACAACTCTTTGAAGTTTCCCGAAAGTATGTCCCTC 229
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 121 GCTATGTTCAGTACAACGTTTATGGACAACTCTTTGAAGTTTCCAGAAAGTATGTCCCTC 180
Query 230 CTATTCGTCCCATTGGTAGAGGCGCTTGCGGTATTGTCTGTGCTGCGGTGAACTCAGTGA 289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 CTATTCGTCCCATTGGTAGAGGCGCTTGCGGTATTGTCTGTGCTGCGGTGAACTCAGTGA 240
Query 290 CTGGAGAGAAAGTGGCTATTAAGAAGATCGGTAATGCTTTTGATAACATCATTGATGCTA 349
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 241 CTGGAGAGAAAGTGGCTATTAAGAAGATCGGTAATGCTTTTGATAACATCATCGATGCTA 300
Query 350 AGAGAACTTTACGTGAAATTAAACTTCTCAGGCATATGGATCATGAGAACGTTATAACCA 409
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 AGAGAACGCTACGTGAAATTAAACTTCTCAGGCATATGGATCATGAGAACGTTATAACCA 360
Query 410 TCAAAGATATTGTAAGACCTCCGCAACGAGATATCTTCAACGATGTCTACATTGTCTATG 469
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 361 TCAAAGATATTGTAAGACCTCCGCAACGAGATATCTTCAATGATGTCTACATTGTCTATG 420
Query 470 AGTTAATGGACACTGATCTTCAAAGAATCCTCCGTTCTAACCAAACACTGACCAGTGATC 529
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 421 AGTTAATGGACACTGATCTTCAGCGAATCCTCCGTTCTAACCAAACACTGACCAGTGATC 480
Query 530 AATGCCGCTTCCTAGTATACCAGCTCTTAAGAGGGCTCAAATACGTGCACTCGGCGAACA 589
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 481 AATGCCGTTTCCTAGTATACCAGCTCTTAAGAGGGCTCAAATACGTGCACTCGGCCAACA 540
Query 590 TATTACATCGTGATCTAAGGCCAAGCAACGTGCTACTTAACTCGAAAAATGAGCTGAAGA 649
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct 541 TATTACATCGTGATCTAAGGCCAAGCAACGTGCTACTTAACTCGAAAAACGAGCTAAAGA 600
Query 650 TTGGTGATTTTGGGCTTGCAAGAACAACTTCAGACACAGACTTCATGACTGAATATGTCG 709
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 601 TTGGTGATTTTGGGCTTGCAAGAACAACTTCCGACACAGACTTCATGACTGAATATGTCG 660
Query 710 TTACCCGTTGGTACAGGGCTCCTGAGTTGCTTCTTAACTGCTCAGAGTACACCGCAGCTA 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 TTACCCGTTGGTACAGGGCTCCTGAGTTGCTTCTTAACTGCTCAGAGTACACCGCAGCTA 720
Query 770 TTGATATTTGGTCTGTTGGTTGCATACTCGGCGAAATCATGACGGGACAGCCGTTGTTTC 829
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct 721 TTGATATTTGGTCTGTTGGCTGCATACTCGGCGAAATCATGACGGGACAACCGTTGTTTC 780
Query 830 CAGGCAAAGATTATGTTCATCAGCTTAGGCTTATAACAGAGCTTGTAGGCTCTCCAGACA 889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 781 CAGGCAAAGATTATGTTCATCAGCTTAGGCTTATAACAGAGCTTGTAGGCTCTCCAGACA 840
Query 890 ATTCCAGCCTGGGCTTCCTTCGCAGTGACAACGCAAGAAGGTATGTCAGGCAACTTCCGC 949
|||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct 841 ATTCCAGCCTCGGCTTCCTTCGCAGTGACAACGCAAGAAGATACGTCAGGCAACTTCCGC 900
Query 950 GATACCCTAAACAGCAGTTTGCTGCTAGATTCCCGAAAATGCCCTCTACCGCTATCGATT 1009
||||||| ||||| |||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct 901 GATACCCGAAACAACAGTTTGCTGCTAGATTCCCGAAAATGCCCACTACGGCTATCGATT 960
Query 1010 TGCTGGAGAGAATGCTCGTCTTTGATCCTAACCGGCGCATCTCAGTCGATGAAGCCCTTG 1069
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 961 TGCTTGAGAGAATGCTCGTCTTTGATCCTAACCGGCGCATCTCAGTCGATGAAGCCCTTG 1020
Query 1070 GCCATGCTTACCTATCACCGCACCACGATGTGAGC-AAAGAACCGGTTTGTTCGACTCCT 1128
||||||||||||||||||||||||| |||||| || ||||||||||| ||||||||||||
Sbjct 1021 GCCATGCTTACCTATCACCGCACCATGATGTG-GCCAAAGAACCGGTCTGTTCGACTCCT 1079
Query 1129 TTCAGCTTTGATTTCGAGCATCCTTCTTGCACAGAAGAACACATAAAGGAGCTTATCTAC 1188
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1080 TTCAGCTTTGATTTCGAACATCCTTCTTGCACAGAAGAACACATAAAGGAGCTTATCTAC 1139
Query 1189 AAGGAGTCTGTCAAATTCAATCCTGACCATTGA 1221
||||||||||||||||||||||||||||| |||
Sbjct 1140 AAGGAGTCTGTCAAATTCAATCCTGACCACTGA 1172
> AT1G01560.2 | Symbols: ATMPK11, MPK11 | MAP kinase 11 | chr1:202136-204189
FORWARD LENGTH=1319
Length=1319
Score = 623 bits (337), Expect = 1e-177
Identities = 823/1052 (78%), Gaps = 56/1052 (5%)
Strand=Plus/Plus
Query 161 ATGGTGGCCGCTATGTTCAGTACAACGTTTATGGACAA-CTCTTTGAAGTTTCCCGAAAG 219
||||||| || ||||| ||||| || || |||||| || |||||||||||||| ||||
Sbjct 265 ATGGTGGTCGTTATGTGCAGTATAATGTCTATGGA-AATCTCTTTGAAGTTTCTAAAAAG 323
Query 220 TATGTCCCTCCTATTCGTCCCATTGGTAGAGGCGCTTGC-GGTATTGTCTGTGCTGCGGT 278
||||| |||||| ||||||| || || |||||||||| | || || ||||||||||| |
Sbjct 324 TATGTTCCTCCTCTTCGTCCTATCGGCAGAGGCGCTT-CTGGCATCGTCTGTGCTGC-AT 381
Query 279 -GAACTCAGTGACTGGAGAGAAAGTGGCTATTAAGAAGATCGGTAATGCTTTTGATAACA 337
||| || | ||| || ||| |||| || || |||||||| |||||||| |||| ||||
Sbjct 382 GGAATTCGGAGACGGGTGAGGAAGTAGCGATCAAGAAGATTGGTAATGCATTTGGCAACA 441
Query 338 TCATTGATGCTAAGAGAACTTT-ACGTGAAATTAAACTTCTCAGGCATATGGATCATGAG 396
| || || |||||||||||||| | | || ||||| ||||| | |||||||||||||||
Sbjct 442 TTATCGACGCTAAGAGAACTTTGA-GAGAGATTAAGCTTCTTAAGCATATGGATCATGAC 500
Query 397 AACGTTATAACCATCAAAGATATTGTAAGACCTCCGCAACGAGATATCTTCAACGATG-T 455
|| || || |||| | ||| || ||||||| || || | ||| | |||||| |||| |
Sbjct 501 AATGTCATTGCCATTATAGACATAATAAGACCACCTCAGCCAGACAACTTCAATGATGTT 560
Query 456 CTACATTGTCTATGAGTTAATGGACACTGATCTTCAA-AGAATCCTCCGTTCTAACCAAA 514
| |||||||||||||||||||||||||||||||||| | | | |||| |||||||||
Sbjct 561 C-ACATTGTCTATGAGTTAATGGACACTGATCTTCACCACATTA-TCCGCTCTAACCAAC 618
Query 515 CACTGACC-AGTGATCAATGC-CG---CTTCCTAGTATACCAGCTCTTAAGAGGGCTCAA 569
| | || | |||||| | | || |||||| |||| | || | || |||| |||||
Sbjct 619 CGTTAACTGA-TGATCATT-CACGGTTCTTCCT-GTAT-C-AGTTGTTGCGAGGCCTCAA 673
Query 570 ATACGTGCACTCGGCGAACATATTACATCGTGATCTAAGGCCAAGCAACGTGCTACTTAA 629
|| ||||| || || || || | ||||||||| ||| || || ||| |||| || ||
Sbjct 674 GTATGTGCATTCAGCCAATGTACTGCATCGTGATTTAAAACCGAGTAACTTGCTCCTGAA 733
Query 630 CTCGAAAAATGAG-C-TGAAGATTGGTGATTTTGGGCTTGCAAGAAC-AACTTCAGACAC 686
| | ||| || | | | |||||||| |||||||||||||| || || || | |||| ||
Sbjct 734 -T-GCAAACTGTGACCTCAAGATTGGGGATTTTGGGCTTGCGAGGACTAAAT-CAGAGAC 790
Query 687 AGACTTCATGACTGAATATGTCGTTACCCGTTGGTACAGGGCTCCTGAGTTGCTTCTTAA 746
|||||||||||| |||||||| ||||| ||||||||| | ||||| |||||||| |||||
Sbjct 791 AGACTTCATGACAGAATATGTTGTTACACGTTGGTACCGAGCTCCAGAGTTGCTCCTTAA 850
Query 747 CTGCTCAGAGTACACCGCAGCTATTGATATTTGGTCTGTTGGTTGCATACTCGGCGAAAT 806
|||||||| ||||| |||||||| || ||||||||||| ||||| |||||||| |||||
Sbjct 851 TTGCTCAGAATACACTGCAGCTATCGACATTTGGTCTGTCGGTTGTATACTCGGTGAAAT 910
Query 807 CATGACG-GGACAGCCGTTGTTTCCAGGCAAAGATTATGTTCATCAGCTTAGGCTTATAA 865
|||||| || ||||||| ||||| |||| |||||||||||| |||||||| || || |
Sbjct 911 AATGACGCGGG-AGCCGTTATTTCCGGGCAGAGATTATGTTCAGCAGCTTAGACTCATCA 969
Query 866 CAGAGCTTGTAGGCTCTCCAGACAATTCCAGCCTGGGCTTCCTTC-GCAGTGACAACGCA 924
| |||||| ||||||| ||||| |||| ||||| || ||| || | || ||||||||
Sbjct 970 CTGAGCTTATAGGCTCACCAGATGATTCAAGCCTAGGATTC-TTAAGAAGCGACAACGCT 1028
Query 925 AGAAGGTATGTCAGGCAACTTCCGC-GATACCCTAA-ACAGCAGTTTGCTGCTAGATTCC 982
||||| || || || || ||||| | | || || || ||| | ||||| ||||||||||
Sbjct 1029 AGAAGATACGTAAGACAGCTTCCACAG-TATCC-AAGACAAAACTTTGCCGCTAGATTCC 1086
Query 983 CGAAA-ATGCCC-TCTACCGCTATCGATTTGCTGGAGAGAATGCTCGTCTTTGATCCTAA 1040
| ||| ||| | || | ||| | ||||||||| ||| ||||||||||||||| || ||
Sbjct 1087 C-AAACATGTCGGTCAAT-GCTGTTGATTTGCTGCAGAAAATGCTCGTCTTTGACCCAAA 1144
Query 1041 CCGGCGCATCT-CAGTCGATGAAGCCCTTG-GCCATGCTTACCTATCACCGC-ACCACGA 1097
| | ||||| | |||||||||||||| ||| |||| ||||| || |||||| || ||||
Sbjct 1145 CAGACGCAT-TACAGTCGATGAAGCC-TTGTGCCACCCTTACTTAGCACCGCTAC-ACGA 1201
Query 1098 -TGTGAGCAAAGAACCGGTTTGT-TCGACTCCTTTC-AGCTTTGATTTCGAGCATCCTTC 1154
| | | | | ||||| || ||| | || || ||| | |||||||||||||| |||||
Sbjct 1202 ATATAA-CGAGGAACCTGTGTGTGT-GAGACCGTTCCAT-TTTGATTTCGAGCAACCTTC 1258
Query 1155 -TTGCACAGAAGA-ACACATAAAGGAGCTTAT 1184
||| || ||||| | |||| |||||||||||
Sbjct 1259 ATTG-ACGGAAGAGA-ACATCAAGGAGCTTAT 1288
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 59989651275
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5